AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0380017884.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017884.01.T01 MTR_3g114540 95.395 456 20 1 27 481 1 456 0.0 875
MsG0380017884.01.T01 MTR_3g114540 94.427 323 17 1 27 348 1 323 0.0 608
MsG0380017884.01.T01 MTR_1g095580 23.919 347 188 9 133 451 54 352 3.14e-13 71.6
MsG0380017884.01.T01 MTR_1g095580 25.362 276 152 7 133 393 54 290 3.32e-13 70.9
MsG0380017884.01.T01 MTR_1g095580 24.275 276 155 6 133 393 54 290 5.10e-13 70.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0380017884.01.T01 AT1G76050 66.230 382 111 3 88 465 62 429 1.25e-179 510
MsG0380017884.01.T01 AT1G76050 64.662 266 76 3 88 349 62 313 1.11e-115 343
MsG0380017884.01.T01 AT3G52260 26.165 279 149 7 133 393 56 295 1.48e-16 81.3
MsG0380017884.01.T01 AT3G52260 26.071 280 148 7 133 393 56 295 4.27e-16 80.1
MsG0380017884.01.T01 AT3G52260 24.555 281 155 7 137 399 90 331 1.30e-13 73.2

Find 126 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGGGTACCTACTCCAGTTTC+TGG 0.142415 3:+101860721 MsG0380017884.01.T01:CDS
TCGTGCGCATGCCAAGTATT+TGG 0.214985 3:+101862507 MsG0380017884.01.T01:CDS
TTGAAGTTCTAAAGTGAAAT+TGG 0.222929 3:-101858201 None:intergenic
GAATCTGATGATGAACTTAA+TGG 0.254410 3:+101860378 MsG0380017884.01.T01:CDS
ATCATACGAAGCCGGTTATT+AGG 0.304094 3:-101860772 None:intergenic
ACGTCTGGGACACTTGTAAA+TGG 0.307453 3:+101860288 MsG0380017884.01.T01:CDS
TGCCTTCATGCTTTGACTCT+CGG 0.309092 3:+101862658 MsG0380017884.01.T01:CDS
CGTGCGCATGCCAAGTATTT+GGG 0.328224 3:+101862508 MsG0380017884.01.T01:CDS
ACCTCAACACGCCCAGAAAC+TGG 0.330144 3:-101860733 None:intergenic
GTTAGATTCTAGATTGTCTA+TGG 0.343480 3:+101860431 MsG0380017884.01.T01:CDS
GCCTTCATGCTTTGACTCTC+GGG 0.373527 3:+101862659 MsG0380017884.01.T01:CDS
CTGCTAGGTGATGAGGTATA+TGG 0.375337 3:+101862538 MsG0380017884.01.T01:CDS
AAAGTAATTGAGATACTTGC+TGG 0.384759 3:+101861352 MsG0380017884.01.T01:CDS
AAACAGTTTCTGAGCTAGAT+AGG 0.391798 3:+101862632 MsG0380017884.01.T01:CDS
TTGAGCCAGCTTCGTAGAAT+TGG 0.391980 3:+101862860 MsG0380017884.01.T01:CDS
AAAATGTCATTAAAATCTAC+AGG 0.393988 3:-101862839 None:intergenic
TCTTTAGAAAATTCAACATT+TGG 0.398853 3:-101860333 None:intergenic
TTGTAATTTGTAAGCCGGTT+TGG 0.406008 3:+101862929 MsG0380017884.01.T01:exon
TCTAATCTGTGTACAATCCC+TGG 0.409587 3:-101860465 None:intergenic
CGGAATTTATAGTTGTTAAC+GGG 0.412983 3:-101858244 None:intergenic
GGGTACCTACTCCAGTTTCT+GGG 0.415015 3:+101860722 MsG0380017884.01.T01:CDS
GACGATGGTGGAATCAAATC+TGG 0.417745 3:+101858367 MsG0380017884.01.T01:CDS
ACGGAATTTATAGTTGTTAA+CGG 0.418512 3:-101858245 None:intergenic
CCAGCACCTGGCAATACGTC+TGG 0.433660 3:+101860273 MsG0380017884.01.T01:CDS
TTAACGGGAGAGAAGTAAAA+TGG 0.436326 3:-101858229 None:intergenic
TAGAAAATTCAACATTTGGC+AGG 0.440551 3:-101860329 None:intergenic
GTTGAGTGGAAGTTGGAAAC+TGG 0.442106 3:+101861391 MsG0380017884.01.T01:CDS
AGGTTTCAGCATCCTCATAC+AGG 0.447372 3:+101862788 MsG0380017884.01.T01:intron
GTTTCTTTCAATGTCAGAGC+TGG 0.450108 3:+101859804 MsG0380017884.01.T01:CDS
CAGAGGTACACCCAAATACT+TGG 0.452967 3:-101862518 None:intergenic
CTTCGTATGATCGCTGTAGC+TGG 0.457054 3:+101860784 MsG0380017884.01.T01:CDS
CACTACCAATTCTACGAAGC+TGG 0.462868 3:-101862865 None:intergenic
TCCTTTGGAGTTTGAATCGT+CGG 0.465085 3:-101858299 None:intergenic
GGAAACTGGACGCACTCATC+AGG 0.468105 3:+101861405 MsG0380017884.01.T01:CDS
GTTAAAGAAGAAGGCCAAAC+CGG 0.474759 3:-101862943 None:intergenic
GAATTACGCCGGCGTGCGGT+TGG 0.475378 3:+101858333 MsG0380017884.01.T01:CDS
GTCTACGTTAGTCTCACTGC+CGG 0.477724 3:+101860700 MsG0380017884.01.T01:CDS
GAAAATTGAGACTCGATAGT+TGG 0.478506 3:+101858389 MsG0380017884.01.T01:CDS
TTATTAGGATCACGGCCAAC+AGG 0.479835 3:-101860757 None:intergenic
TTCGGAATTACCATGTGAGC+AGG 0.484681 3:-101859936 None:intergenic
CAACATTTGGCAGGTTGCAA+TGG 0.489674 3:-101860320 None:intergenic
CAGAAGAACTTGACTGGGAT+GGG 0.492588 3:-101860404 None:intergenic
ACCCTTCAGAAGAACTTGAC+TGG 0.494113 3:-101860410 None:intergenic
TGGATCTCTTCTCGCATCAA+TGG 0.494517 3:+101858409 MsG0380017884.01.T01:CDS
GGGTATTGTAATTTGTAAGC+CGG 0.495438 3:+101862924 MsG0380017884.01.T01:exon
TTTCTTTCAATGTCAGAGCT+GGG 0.495851 3:+101859805 MsG0380017884.01.T01:CDS
TTGGCCGTGATCCTAATAAC+CGG 0.497077 3:+101860761 MsG0380017884.01.T01:CDS
TGCATTGGTTGAGTGGAAGT+TGG 0.497604 3:+101861384 MsG0380017884.01.T01:CDS
GCTGGACTCGTTCATGTCAA+TGG 0.501112 3:+101858466 MsG0380017884.01.T01:CDS
TCACCTACTAGCCGCATGAC+GGG 0.501679 3:-101860827 None:intergenic
TCCAGTTTCTGGGCGTGTTG+AGG 0.504442 3:+101860732 MsG0380017884.01.T01:CDS
GTAGCTGTGCATTGGTTGAG+TGG 0.505625 3:+101861377 MsG0380017884.01.T01:CDS
CAATGGCCGTGTTGTTGATA+AGG 0.509560 3:+101858483 MsG0380017884.01.T01:CDS
GCAGCAGTTGAGAGCTGTGC+CGG 0.509649 3:+101859857 MsG0380017884.01.T01:CDS
CATAAATAAACCTGCTCACA+TGG 0.510867 3:+101859926 MsG0380017884.01.T01:CDS
CTCACTTGATATGGAATGGA+AGG 0.511310 3:+101858054 None:intergenic
TCTACGTTAGTCTCACTGCC+GGG 0.511350 3:+101860701 MsG0380017884.01.T01:CDS
GTTTATTTATGACTAGCAAA+TGG 0.513827 3:-101859914 None:intergenic
GAAAGAAATGTTAAAGAAGA+AGG 0.519055 3:-101862952 None:intergenic
AGTGTCCCAGACGTATTGCC+AGG 0.521402 3:-101860279 None:intergenic
GTCCAGTCAAGTATTAAAGC+TGG 0.521976 3:+101858448 MsG0380017884.01.T01:CDS
TCAGAAGAACTTGACTGGGA+TGG 0.524497 3:-101860405 None:intergenic
CGGATTTCGCAATGGAGGAA+CGG 0.524552 3:-101858264 None:intergenic
GCATCCTCATACAGGGGAGC+AGG 0.525403 3:+101862796 MsG0380017884.01.T01:CDS
TCAACTCACTTGATATGGAA+TGG 0.526354 3:+101858050 None:intergenic
GTCCAGCTTTAATACTTGAC+TGG 0.528396 3:-101858450 None:intergenic
CCCTTCAGAAGAACTTGACT+GGG 0.529961 3:-101860409 None:intergenic
AAGCCCGTCATGCGGCTAGT+AGG 0.531246 3:+101860824 MsG0380017884.01.T01:CDS
TGCACCTGCTCCCCTGTATG+AGG 0.537559 3:-101862800 None:intergenic
TCCCAGTCAAGTTCTTCTGA+AGG 0.541536 3:+101860408 MsG0380017884.01.T01:CDS
TGCAAACTCAGAGTTGTTCG+TGG 0.546726 3:-101862595 None:intergenic
TTATCGCTTAACACCTCATG+TGG 0.549398 3:+101858145 MsG0380017884.01.T01:CDS
TAGGTTGTGCATCCAGCACC+TGG 0.549682 3:+101860261 MsG0380017884.01.T01:intron
GGGCGTGTTGAGGTTCCTGT+TGG 0.551149 3:+101860742 MsG0380017884.01.T01:CDS
ATCGTCGGAGAAAGTAGAAA+CGG 0.551270 3:-101858284 None:intergenic
CCAGACGTATTGCCAGGTGC+TGG 0.551763 3:-101860273 None:intergenic
CTAATCTGTGTACAATCCCT+GGG 0.557086 3:-101860464 None:intergenic
CCCAGTCAAGTTCTTCTGAA+GGG 0.559475 3:+101860409 MsG0380017884.01.T01:CDS
TGGGTTACTAGTTGTCGCTA+AGG 0.563661 3:+101860500 MsG0380017884.01.T01:CDS
GAAGAAATTGTCGACGATGG+TGG 0.564642 3:+101858355 MsG0380017884.01.T01:CDS
TGTACCTCTGCTAGGTGATG+AGG 0.565230 3:+101862531 MsG0380017884.01.T01:CDS
TGAAAGTATTTCTCACTCAA+AGG 0.574310 3:+101862886 MsG0380017884.01.T01:CDS
GGTTTCAGCATCCTCATACA+GGG 0.574635 3:+101862789 MsG0380017884.01.T01:intron
AAGTAATTGAGATACTTGCT+GGG 0.576544 3:+101861353 MsG0380017884.01.T01:CDS
CAGCACCTGGCAATACGTCT+GGG 0.578291 3:+101860274 MsG0380017884.01.T01:CDS
TGTGCCGGAAAACATACCTC+TGG 0.579322 3:+101859872 MsG0380017884.01.T01:CDS
GCATGGTCTTGTCATTGCTA+CGG 0.579433 3:+101862572 MsG0380017884.01.T01:CDS
TCTATGGCATCAATTCGCCC+AGG 0.580707 3:+101860447 MsG0380017884.01.T01:CDS
AGATTAGACAAAGGCACGAG+TGG 0.588012 3:+101860480 MsG0380017884.01.T01:CDS
ATCACCTACTAGCCGCATGA+CGG 0.592873 3:-101860828 None:intergenic
TTCTTTCAATGTCAGAGCTG+GGG 0.593498 3:+101859806 MsG0380017884.01.T01:CDS
CTAGGTGATGAGGTATATGG+AGG 0.595073 3:+101862541 MsG0380017884.01.T01:CDS
TATTTGGGTGTACCTCTGCT+AGG 0.595506 3:+101862523 MsG0380017884.01.T01:CDS
GTTTCAGCATCCTCATACAG+GGG 0.596383 3:+101862790 MsG0380017884.01.T01:CDS
AAATGTCATTAAAATCTACA+GGG 0.601078 3:-101862838 None:intergenic
ACCCGAGAGTCAAAGCATGA+AGG 0.607294 3:-101862660 None:intergenic
TTCTGTGAAAGCCCGTCATG+CGG 0.607595 3:+101860816 MsG0380017884.01.T01:CDS
CTCACTAGATAGAGCTTCCG+CGG 0.608477 3:-101858107 None:intergenic
AGAGTCAAAGCATGAAGGCA+AGG 0.615312 3:-101862655 None:intergenic
TCAAGCTACGCACTATCAAG+AGG 0.626322 3:+101860677 MsG0380017884.01.T01:CDS
AAACGAATTACGCCGGCGTG+CGG 0.629163 3:+101858329 MsG0380017884.01.T01:CDS
AGTAGAAACGGATTTCGCAA+TGG 0.630315 3:-101858272 None:intergenic
CTATGGCATCAATTCGCCCA+GGG 0.635497 3:+101860448 MsG0380017884.01.T01:CDS
TCCGACGATTCAAACTCCAA+AGG 0.642152 3:+101858298 MsG0380017884.01.T01:CDS
CAAGCTACGCACTATCAAGA+GGG 0.647303 3:+101860678 MsG0380017884.01.T01:CDS
GATTAGACAAAGGCACGAGT+GGG 0.651038 3:+101860481 MsG0380017884.01.T01:CDS
AGTAATTGAGATACTTGCTG+GGG 0.652006 3:+101861354 MsG0380017884.01.T01:CDS
CTACAGCGATCATACGAAGC+CGG 0.657140 3:-101860780 None:intergenic
AGAAACGGATTTCGCAATGG+AGG 0.657913 3:-101858269 None:intergenic
ATATGGAGGGACGAAAAGCA+TGG 0.659140 3:+101862555 MsG0380017884.01.T01:CDS
TGAGATCAAATGTACGATTG+CGG 0.665499 3:+101859830 MsG0380017884.01.T01:CDS
TTGGAAGAAATTGTCGACGA+TGG 0.672159 3:+101858352 MsG0380017884.01.T01:CDS
ACACGCCCAGAAACTGGAGT+AGG 0.673243 3:-101860727 None:intergenic
AATTTCTTCCAACCGCACGC+CGG 0.673764 3:-101858341 None:intergenic
GAAGCCGGTTATTAGGATCA+CGG 0.679316 3:-101860765 None:intergenic
TCTTCATAAACTATATCCAG+AGG 0.684572 3:-101859888 None:intergenic
CTACGTTAGTCTCACTGCCG+GGG 0.686770 3:+101860702 MsG0380017884.01.T01:CDS
AGAAACTGGAGTAGGTACCC+CGG 0.688257 3:-101860719 None:intergenic
TAGGTGATGAGGTATATGGA+GGG 0.689938 3:+101862542 MsG0380017884.01.T01:CDS
ATGTCATTAAAATCTACAGG+GGG 0.696305 3:-101862836 None:intergenic
AATGTCATTAAAATCTACAG+GGG 0.696801 3:-101862837 None:intergenic
AACACCGCAAAATCCACATG+AGG 0.697166 3:-101858158 None:intergenic
TATACCTCATCACCTAGCAG+AGG 0.705895 3:-101862535 None:intergenic
AGACTACCTTATCAACAACA+CGG 0.706446 3:-101858489 None:intergenic
ATTGTACACAGATTAGACAA+AGG 0.708980 3:+101860471 MsG0380017884.01.T01:CDS
GTAATTGAGATACTTGCTGG+GGG 0.718933 3:+101861355 MsG0380017884.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTATATTTTTAAAAAAT+TGG + Chr3:101862994-101863013 MsG0380017884.01.T01:three_prime_UTR 0.0%
!!! TATTATATTTTTAAAAAATT+GGG + Chr3:101862995-101863014 MsG0380017884.01.T01:three_prime_UTR 0.0%
!! AAATATTAAAATAGATTTAG+AGG + Chr3:101862258-101862277 MsG0380017884.01.T01:intron 10.0%
!! TAATATTACATATTACATTT+GGG + Chr3:101861238-101861257 MsG0380017884.01.T01:intron 10.0%
!! ATCATTTAAATATTCAAGAA+TGG - Chr3:101859289-101859308 None:intergenic 15.0%
!! GTAATATTACATATTACATT+TGG + Chr3:101861237-101861256 MsG0380017884.01.T01:intron 15.0%
!! TACTCATATTGAATTATATT+AGG + Chr3:101860888-101860907 MsG0380017884.01.T01:intron 15.0%
!! TTAGAAGATATTATAAGTTT+AGG - Chr3:101862463-101862482 None:intergenic 15.0%
!!! ATATTACATATATTTTGCAA+TGG - Chr3:101861224-101861243 None:intergenic 15.0%
!!! ATTTTCATTCTAAATTACTT+AGG + Chr3:101859713-101859732 MsG0380017884.01.T01:intron 15.0%
!!! GTTTTCATATATTATATCTT+AGG - Chr3:101861705-101861724 None:intergenic 15.0%
!! AAAATGTCATTAAAATCTAC+AGG - Chr3:101862842-101862861 None:intergenic 20.0%
!! AAATAACCAAACAAAAAACT+GGG - Chr3:101859621-101859640 None:intergenic 20.0%
!! AAATATTCTGAGTATAATAG+TGG + Chr3:101859453-101859472 MsG0380017884.01.T01:intron 20.0%
!! AAATGTCATTAAAATCTACA+GGG - Chr3:101862841-101862860 None:intergenic 20.0%
!! AAGTGTTTCATGTAATAAAA+AGG + Chr3:101861894-101861913 MsG0380017884.01.T01:intron 20.0%
!! ATAAATATATTCTAGGTCTA+GGG - Chr3:101859594-101859613 None:intergenic 20.0%
!! TAAATTACTTAGGTTCTTTA+AGG + Chr3:101859723-101859742 MsG0380017884.01.T01:intron 20.0%
!! TTACATAGTTTAAACATCTT+AGG + Chr3:101861789-101861808 MsG0380017884.01.T01:intron 20.0%
!! TTTACAGATAATGTATTCTT+AGG + Chr3:101861602-101861621 MsG0380017884.01.T01:intron 20.0%
!!! AAATGTTGAATTTTCTAAAG+AGG + Chr3:101860335-101860354 MsG0380017884.01.T01:CDS 20.0%
!!! AATAAATAAATGCTCACTTT+TGG - Chr3:101858846-101858865 None:intergenic 20.0%
!!! AATACTTGATGATTAAATTC+AGG + Chr3:101860085-101860104 MsG0380017884.01.T01:intron 20.0%
!!! ATTACTACGAATTTTCTATT+TGG + Chr3:101858565-101858584 MsG0380017884.01.T01:intron 20.0%
!!! TCTTTAGAAAATTCAACATT+TGG - Chr3:101860336-101860355 None:intergenic 20.0%
!!! TTTTGAGAAGTTTATTCAAA+AGG + Chr3:101861266-101861285 MsG0380017884.01.T01:intron 20.0%
! AATGTCATTAAAATCTACAG+GGG - Chr3:101862840-101862859 None:intergenic 25.0%
! ACGGAATTTATAGTTGTTAA+CGG - Chr3:101858248-101858267 None:intergenic 25.0%
! AGATGTAAACATTTGATTCA+AGG + Chr3:101861844-101861863 MsG0380017884.01.T01:intron 25.0%
! AGGTCAAATGTTAAAAAAGA+TGG + Chr3:101861809-101861828 MsG0380017884.01.T01:intron 25.0%
! ATAAATGTGTACACAAATGT+TGG - Chr3:101860987-101861006 None:intergenic 25.0%
! CATAAATATATTCTAGGTCT+AGG - Chr3:101859595-101859614 None:intergenic 25.0%
! GAAAGAAATGTTAAAGAAGA+AGG - Chr3:101862955-101862974 None:intergenic 25.0%
! GAAATAACCAAACAAAAAAC+TGG - Chr3:101859622-101859641 None:intergenic 25.0%
! GGGATACATAAATATATTCT+AGG - Chr3:101859601-101859620 None:intergenic 25.0%
! GTTTATTTATGACTAGCAAA+TGG - Chr3:101859917-101859936 None:intergenic 25.0%
! TAAAAGTTCCTTAGTAAGAA+AGG + Chr3:101862163-101862182 MsG0380017884.01.T01:intron 25.0%
! TCGAATATTTAGATGAGAAA+GGG + Chr3:101859094-101859113 MsG0380017884.01.T01:intron 25.0%
! TGTTTAAACTATGTAACTTG+TGG - Chr3:101861785-101861804 None:intergenic 25.0%
! TTCGAATATTTAGATGAGAA+AGG + Chr3:101859093-101859112 MsG0380017884.01.T01:intron 25.0%
! TTTATTACATGAAACACTTG+AGG - Chr3:101861893-101861912 None:intergenic 25.0%
!! AACTTTAGAGAAATCCTAAT+TGG + Chr3:101861442-101861461 MsG0380017884.01.T01:intron 25.0%
!! AGAAATTTTCAGAAGGAAAA+GGG + Chr3:101860188-101860207 MsG0380017884.01.T01:intron 25.0%
!! ATATATCCCTTGTTTATTTG+TGG + Chr3:101859028-101859047 MsG0380017884.01.T01:intron 25.0%
!! ATTTATGATTTGCAAACAAG+AGG - Chr3:101859693-101859712 None:intergenic 25.0%
!! GTTTTATATCAACTGCTTAA+TGG + Chr3:101861288-101861307 MsG0380017884.01.T01:intron 25.0%
!! TCAAAGGCCAAATTTTTAAA+AGG + Chr3:101862902-101862921 MsG0380017884.01.T01:CDS 25.0%
!! TGAATTATATTAGGTGCTTT+TGG + Chr3:101860897-101860916 MsG0380017884.01.T01:intron 25.0%
!! TGTTTGGTTATTTCATCAAT+TGG + Chr3:101859628-101859647 MsG0380017884.01.T01:intron 25.0%
!! TTTCTTACTAAGGAACTTTT+AGG - Chr3:101862164-101862183 None:intergenic 25.0%
!!! AAAGGCCAAATTTTTAAAAG+GGG + Chr3:101862904-101862923 MsG0380017884.01.T01:CDS 25.0%
!!! CAAAGGCCAAATTTTTAAAA+GGG + Chr3:101862903-101862922 MsG0380017884.01.T01:CDS 25.0%
!!! CAATACCCCTTTTAAAAATT+TGG - Chr3:101862912-101862931 None:intergenic 25.0%
!!! TAAGACAACTTTTGTTTGAA+TGG + Chr3:101861678-101861697 MsG0380017884.01.T01:intron 25.0%
!!! TTGAAGTTCTAAAGTGAAAT+TGG - Chr3:101858204-101858223 None:intergenic 25.0%
AAAAAAGATGGAGAAACAGA+GGG + Chr3:101861821-101861840 MsG0380017884.01.T01:intron 30.0%
AAAATTGTGAAGGACCAAAT+TGG - Chr3:101858905-101858924 None:intergenic 30.0%
AAAGTAATTGAGATACTTGC+TGG + Chr3:101861352-101861371 MsG0380017884.01.T01:CDS 30.0%
AAATAACATCTTAGAGCAAG+TGG - Chr3:101859962-101859981 None:intergenic 30.0%
AAATCCAGATCATTCAATCT+TGG + Chr3:101859004-101859023 MsG0380017884.01.T01:intron 30.0%
AAATTGTGAAGGACCAAATT+GGG - Chr3:101858904-101858923 None:intergenic 30.0%
AACCAATATCCATGTTTATG+AGG - Chr3:101858683-101858702 None:intergenic 30.0%
AACTGACCACAAATAAACAA+GGG - Chr3:101859037-101859056 None:intergenic 30.0%
AAGAAAAAACCCTAGCTTAA+AGG + Chr3:101861736-101861755 MsG0380017884.01.T01:intron 30.0%
AAGAAAGGTAGATTAGATCA+AGG + Chr3:101862178-101862197 MsG0380017884.01.T01:intron 30.0%
AAGTAATTGAGATACTTGCT+GGG + Chr3:101861353-101861372 MsG0380017884.01.T01:CDS 30.0%
AATGAGTGAAAATACTACAC+GGG + Chr3:101862040-101862059 MsG0380017884.01.T01:intron 30.0%
ACAACAAGATTATGCCAATT+AGG - Chr3:101861459-101861478 None:intergenic 30.0%
ACAGATAATGTATTCTTAGG+TGG + Chr3:101861605-101861624 MsG0380017884.01.T01:intron 30.0%
ACATTGCATAGATGTACTAA+CGG + Chr3:101861544-101861563 MsG0380017884.01.T01:intron 30.0%
ACCATTACTTAGGACATTTA+AGG + Chr3:101859408-101859427 MsG0380017884.01.T01:intron 30.0%
AGTACTTGTAGACACAAATT+CGG - Chr3:101858542-101858561 None:intergenic 30.0%
ATAACTTCGTAGCTAAACTT+TGG + Chr3:101862701-101862720 MsG0380017884.01.T01:intron 30.0%
ATATCAAGGCATACAAATAC+TGG - Chr3:101860620-101860639 None:intergenic 30.0%
ATGTCATTAAAATCTACAGG+GGG - Chr3:101862839-101862858 None:intergenic 30.0%
ATTGTACACAGATTAGACAA+AGG + Chr3:101860471-101860490 MsG0380017884.01.T01:CDS 30.0%
CAGAGATCCATTAATATCAA+TGG + Chr3:101858820-101858839 MsG0380017884.01.T01:intron 30.0%
CCTACAGGTTAAAAGTTAAA+TGG - Chr3:101861037-101861056 None:intergenic 30.0%
CGGAATTTATAGTTGTTAAC+GGG - Chr3:101858247-101858266 None:intergenic 30.0%
CTAATCTACCTTTCTTACTA+AGG - Chr3:101862174-101862193 None:intergenic 30.0%
GAATGAGTGAAAATACTACA+CGG + Chr3:101862039-101862058 MsG0380017884.01.T01:intron 30.0%
GCTCAACTACAAATTAAGAA+AGG - Chr3:101859763-101859782 None:intergenic 30.0%
GTAAACATTTGATTCAAGGA+AGG + Chr3:101861848-101861867 MsG0380017884.01.T01:intron 30.0%
GTGATGAGTTAACTAATAGA+AGG - Chr3:101858796-101858815 None:intergenic 30.0%
GTTAGATTCTAGATTGTCTA+TGG + Chr3:101860431-101860450 MsG0380017884.01.T01:CDS 30.0%
TAAAAAAGATGGAGAAACAG+AGG + Chr3:101861820-101861839 MsG0380017884.01.T01:intron 30.0%
TAGAAAATTCAACATTTGGC+AGG - Chr3:101860332-101860351 None:intergenic 30.0%
TAGGCTTTACTATATTACAG+TGG - Chr3:101862444-101862463 None:intergenic 30.0%
TATCAAGGCATACAAATACT+GGG - Chr3:101860619-101860638 None:intergenic 30.0%
TATCTACTGTACAATTATGC+AGG - Chr3:101860004-101860023 None:intergenic 30.0%
TATTCCAAGATTGAATGATC+TGG - Chr3:101859011-101859030 None:intergenic 30.0%
TATTTGTATGCCTTGATATC+AGG + Chr3:101860621-101860640 MsG0380017884.01.T01:intron 30.0%
TCATAAACATGGATATTGGT+TGG + Chr3:101858682-101858701 MsG0380017884.01.T01:intron 30.0%
TCATATATTGCATTTGCAAG+AGG + Chr3:101859187-101859206 MsG0380017884.01.T01:intron 30.0%
TCTTCATAAACTATATCCAG+AGG - Chr3:101859891-101859910 None:intergenic 30.0%
TGGGTCTATTGTGTAAAAAT+TGG + Chr3:101862097-101862116 MsG0380017884.01.T01:intron 30.0%
TTGTAAGTGAGAGAACTAAA+GGG + Chr3:101861475-101861494 MsG0380017884.01.T01:intron 30.0%
TTTAAATGATGCACCCAAAT+TGG + Chr3:101859299-101859318 MsG0380017884.01.T01:intron 30.0%
TTTAGATTGAAGACCCAATT+TGG + Chr3:101858888-101858907 MsG0380017884.01.T01:intron 30.0%
TTTATAAGCTAATGACCTAC+AGG - Chr3:101861052-101861071 None:intergenic 30.0%
TTTGAGAACTACCATTACTT+AGG + Chr3:101859398-101859417 MsG0380017884.01.T01:intron 30.0%
! AAAGTTGATTACTATCTGTC+AGG + Chr3:101861326-101861345 MsG0380017884.01.T01:intron 30.0%
! AATTGATAGCACTATTGGTT+TGG + Chr3:101862752-101862771 MsG0380017884.01.T01:intron 30.0%
! ATGACAATTGATAGCACTAT+TGG + Chr3:101862747-101862766 MsG0380017884.01.T01:intron 30.0%
! ATGTAACTTGTGGTATTGTA+TGG - Chr3:101861775-101861794 None:intergenic 30.0%
! CAACTTTTACCTTTAAGCTA+GGG - Chr3:101861748-101861767 None:intergenic 30.0%
! CAGAAATTTTCAGAAGGAAA+AGG + Chr3:101860187-101860206 MsG0380017884.01.T01:intron 30.0%
! CTTTTGGCCATTGATATTAA+TGG - Chr3:101858830-101858849 None:intergenic 30.0%
! GAATCTGATGATGAACTTAA+TGG + Chr3:101860378-101860397 MsG0380017884.01.T01:CDS 30.0%
! TAATTTGTAGTTGAGCATTG+TGG + Chr3:101859767-101859786 MsG0380017884.01.T01:intron 30.0%
!! CCATTTAACTTTTAACCTGT+AGG + Chr3:101861034-101861053 MsG0380017884.01.T01:intron 30.0%
!! TACTTTTCGAACAAGTATTG+TGG - Chr3:101859533-101859552 None:intergenic 30.0%
!! TGAAAGTATTTCTCACTCAA+AGG + Chr3:101862886-101862905 MsG0380017884.01.T01:CDS 30.0%
!! TTTTAAGTGAGTGCAAACTA+TGG - Chr3:101861100-101861119 None:intergenic 30.0%
!!! ATGTATCCCAGTTTTTTGTT+TGG + Chr3:101859612-101859631 MsG0380017884.01.T01:intron 30.0%
AAACAGTTTCTGAGCTAGAT+AGG + Chr3:101862632-101862651 MsG0380017884.01.T01:CDS 35.0%
AAAGCATGGTCAAATTTCCA+TGG + Chr3:101861517-101861536 MsG0380017884.01.T01:intron 35.0%
AACATTTGATTCAAGGAAGG+TGG + Chr3:101861851-101861870 MsG0380017884.01.T01:intron 35.0%
AATATCCATGTTTATGAGGC+TGG - Chr3:101858679-101858698 None:intergenic 35.0%
AGACTACCTTATCAACAACA+CGG - Chr3:101858492-101858511 None:intergenic 35.0%
AGATTTAGAGGACAATGCTT+TGG + Chr3:101862270-101862289 MsG0380017884.01.T01:intron 35.0%
AGCCTCATAAACATGGATAT+TGG + Chr3:101858678-101858697 MsG0380017884.01.T01:intron 35.0%
ATATCCATGTTTATGAGGCT+GGG - Chr3:101858678-101858697 None:intergenic 35.0%
CAAATTCGGAACAGTTGAAA+TGG - Chr3:101858528-101858547 None:intergenic 35.0%
CAAGGAAAGACTTCCAATTT+GGG - Chr3:101859315-101859334 None:intergenic 35.0%
CAATCACTAAAGGCAAAAGA+AGG + Chr3:101862207-101862226 MsG0380017884.01.T01:intron 35.0%
CATAAATAAACCTGCTCACA+TGG + Chr3:101859926-101859945 MsG0380017884.01.T01:CDS 35.0%
CATTATATGCTCTTCAACCT+AGG + Chr3:101860242-101860261 MsG0380017884.01.T01:intron 35.0%
CCTAGCTTAAAGGTAAAAGT+TGG + Chr3:101861746-101861765 MsG0380017884.01.T01:intron 35.0%
CCTCTGTTTATAATGAGTCA+GGG - Chr3:101858947-101858966 None:intergenic 35.0%
CCTGACTCATTATAAACAGA+GGG + Chr3:101858945-101858964 MsG0380017884.01.T01:intron 35.0%
CTCATTATAAACAGAGGGAT+TGG + Chr3:101858950-101858969 MsG0380017884.01.T01:intron 35.0%
GAAAATTGAGACTCGATAGT+TGG + Chr3:101858389-101858408 MsG0380017884.01.T01:CDS 35.0%
GAACTGACCACAAATAAACA+AGG - Chr3:101859038-101859057 None:intergenic 35.0%
GAAGTCATAGATTCAAGTCA+TGG - Chr3:101859219-101859238 None:intergenic 35.0%
GAATGTTCATCCTGATATCA+AGG - Chr3:101860634-101860653 None:intergenic 35.0%
GCCTTAAATGTCCTAAGTAA+TGG - Chr3:101859412-101859431 None:intergenic 35.0%
GTATGAGAATGAGTGTTTGA+TGG + Chr3:101861963-101861982 MsG0380017884.01.T01:intron 35.0%
GTTGTAAGTGAGAGAACTAA+AGG + Chr3:101861474-101861493 MsG0380017884.01.T01:intron 35.0%
TCCTCGGTATAAAATTGTGA+AGG - Chr3:101858915-101858934 None:intergenic 35.0%
TGAGATCAAATGTACGATTG+CGG + Chr3:101859830-101859849 MsG0380017884.01.T01:CDS 35.0%
TTAACGGGAGAGAAGTAAAA+TGG - Chr3:101858232-101858251 None:intergenic 35.0%
TTACAGATGTAGTCTCAACT+AGG - Chr3:101859350-101859369 None:intergenic 35.0%
TTAGCGTTCAAGCAATAGTT+GGG + Chr3:101862078-101862097 MsG0380017884.01.T01:intron 35.0%
TTTCTTTCAATGTCAGAGCT+GGG + Chr3:101859805-101859824 MsG0380017884.01.T01:CDS 35.0%
! AAAAAGGTACAACTCAAGCT+AGG + Chr3:101861910-101861929 MsG0380017884.01.T01:intron 35.0%
! AAAAGGTACAACTCAAGCTA+GGG + Chr3:101861911-101861930 MsG0380017884.01.T01:intron 35.0%
! AACATGGATATTGGTTGGTT+AGG + Chr3:101858687-101858706 MsG0380017884.01.T01:intron 35.0%
! AAGTTTTCATTTCAAAGCCG+CGG + Chr3:101858090-101858109 MsG0380017884.01.T01:CDS 35.0%
! AGTAATTGAGATACTTGCTG+GGG + Chr3:101861354-101861373 MsG0380017884.01.T01:CDS 35.0%
! CCAACTTTTACCTTTAAGCT+AGG - Chr3:101861749-101861768 None:intergenic 35.0%
! CCATGTCAGAAATTTTCAGA+AGG + Chr3:101860181-101860200 MsG0380017884.01.T01:intron 35.0%
! CCTTCTGAAAATTTCTGACA+TGG - Chr3:101860184-101860203 None:intergenic 35.0%
! GGGTATTGTAATTTGTAAGC+CGG + Chr3:101862924-101862943 MsG0380017884.01.T01:exon 35.0%
! TCCTTCACAATTTTATACCG+AGG + Chr3:101858911-101858930 MsG0380017884.01.T01:intron 35.0%
! TTGTAATTTGTAAGCCGGTT+TGG + Chr3:101862929-101862948 MsG0380017884.01.T01:exon 35.0%
! TTTTGCCTTTAGTGATTGAG+TGG - Chr3:101862205-101862224 None:intergenic 35.0%
!! ACTAGGAGATTATTTCTGCA+AGG - Chr3:101859333-101859352 None:intergenic 35.0%
!! ATATCCAGAGGTATGTTTTC+CGG - Chr3:101859879-101859898 None:intergenic 35.0%
!!! AGATAGTGCGACACTTTTTT+TGG + Chr3:101860019-101860038 MsG0380017884.01.T01:intron 35.0%
!!! AGCTAGGGTTTTTTCTTCTT+TGG - Chr3:101861733-101861752 None:intergenic 35.0%
!!! ATTCGTTTTTGGTTCTCCTT+TGG - Chr3:101858317-101858336 None:intergenic 35.0%
AAGAATGGAAGTCTTGCAGT+TGG - Chr3:101859274-101859293 None:intergenic 40.0%
AAGGACCACTCAATCACTAA+AGG + Chr3:101862197-101862216 MsG0380017884.01.T01:intron 40.0%
ACATCTTAGAGCAAGTGGTT+CGG - Chr3:101859957-101859976 None:intergenic 40.0%
ACTGTACAATAGACCCACAA+TGG - Chr3:101859168-101859187 None:intergenic 40.0%
AGTCACTAACTGCAACAAGA+TGG - Chr3:101859379-101859398 None:intergenic 40.0%
AGTTAAATGGACCACACAGA+AGG - Chr3:101861024-101861043 None:intergenic 40.0%
AGTTGAAAATCCCTTCTGTG+TGG + Chr3:101861010-101861029 MsG0380017884.01.T01:intron 40.0%
ATAGCTCTTGTCTGAGTCTA+GGG + Chr3:101859138-101859157 MsG0380017884.01.T01:intron 40.0%
ATCATACGAAGCCGGTTATT+AGG - Chr3:101860775-101860794 None:intergenic 40.0%
ATCGTCGGAGAAAGTAGAAA+CGG - Chr3:101858287-101858306 None:intergenic 40.0%
CCACTTTATTCTGTAGTGCT+AGG + Chr3:101860125-101860144 MsG0380017884.01.T01:intron 40.0%
CCCTCTGTTTATAATGAGTC+AGG - Chr3:101858948-101858967 None:intergenic 40.0%
CCCTGACTCATTATAAACAG+AGG + Chr3:101858944-101858963 MsG0380017884.01.T01:intron 40.0%
CCTAGCACTACAGAATAAAG+TGG - Chr3:101860128-101860147 None:intergenic 40.0%
CCTCCTTTCTCTTCTAAATG+CGG + Chr3:101858648-101858667 MsG0380017884.01.T01:intron 40.0%
CTAATCTGTGTACAATCCCT+GGG - Chr3:101860467-101860486 None:intergenic 40.0%
CTACTGTACAATTATGCAGG+TGG - Chr3:101860001-101860020 None:intergenic 40.0%
CTCCTTTCTCTTCTAAATGC+GGG + Chr3:101858649-101858668 MsG0380017884.01.T01:intron 40.0%
GAACCAAAAACGAATTACGC+CGG + Chr3:101858322-101858341 MsG0380017884.01.T01:CDS 40.0%
GAATCTCAACCTAGATCGTT+TGG + Chr3:101862122-101862141 MsG0380017884.01.T01:intron 40.0%
GAGAGTCGAGAGGAAATAAA+TGG + Chr3:101861627-101861646 MsG0380017884.01.T01:intron 40.0%
GCAAGGAAAGACTTCCAATT+TGG - Chr3:101859316-101859335 None:intergenic 40.0%
GCACTACAGAATAAAGTGGT+TGG - Chr3:101860124-101860143 None:intergenic 40.0%
GCATATCATCTGGAGAAGAA+GGG + Chr3:101858722-101858741 MsG0380017884.01.T01:intron 40.0%
GTCCAGTCAAGTATTAAAGC+TGG + Chr3:101858448-101858467 MsG0380017884.01.T01:CDS 40.0%
GTCGAGAGGAAATAAATGGA+AGG + Chr3:101861631-101861650 MsG0380017884.01.T01:intron 40.0%
GTTAAAGAAGAAGGCCAAAC+CGG - Chr3:101862946-101862965 None:intergenic 40.0%
GTTAAATGGACCACACAGAA+GGG - Chr3:101861023-101861042 None:intergenic 40.0%
GTTAGCGTTCAAGCAATAGT+TGG + Chr3:101862077-101862096 MsG0380017884.01.T01:intron 40.0%
GTTGGTTAGGAAGATCTAGA+GGG + Chr3:101858700-101858719 MsG0380017884.01.T01:intron 40.0%
GTTTCTTTCAATGTCAGAGC+TGG + Chr3:101859804-101859823 MsG0380017884.01.T01:CDS 40.0%
TAAATGGAAGGTTAGAGACG+TGG + Chr3:101861643-101861662 MsG0380017884.01.T01:intron 40.0%
TACCCGCATTTAGAAGAGAA+AGG - Chr3:101858654-101858673 None:intergenic 40.0%
TAGGTGATGAGGTATATGGA+GGG + Chr3:101862542-101862561 MsG0380017884.01.T01:CDS 40.0%
TATAGCTCTTGTCTGAGTCT+AGG + Chr3:101859137-101859156 MsG0380017884.01.T01:intron 40.0%
TCTAATCTGTGTACAATCCC+TGG - Chr3:101860468-101860487 None:intergenic 40.0%
TGAGACTACATCTGTAATGC+TGG + Chr3:101859353-101859372 MsG0380017884.01.T01:intron 40.0%
TTATCGCTTAACACCTCATG+TGG + Chr3:101858145-101858164 MsG0380017884.01.T01:CDS 40.0%
TTCAAGGAAGGTGGTTGAAA+TGG + Chr3:101861860-101861879 MsG0380017884.01.T01:intron 40.0%
TTCTTTCAATGTCAGAGCTG+GGG + Chr3:101859806-101859825 MsG0380017884.01.T01:CDS 40.0%
TTGGAAGAAATTGTCGACGA+TGG + Chr3:101858352-101858371 MsG0380017884.01.T01:CDS 40.0%
TTTACCATCGGAGTAAAGCA+TGG + Chr3:101861503-101861522 MsG0380017884.01.T01:intron 40.0%
TTTAGATGAGAAAGGGCAAC+AGG + Chr3:101859101-101859120 MsG0380017884.01.T01:intron 40.0%
! AAAAGCATGCTGCAAAGTGT+TGG - Chr3:101861584-101861603 None:intergenic 40.0%
! AACACCTCATGTGGATTTTG+CGG + Chr3:101858154-101858173 MsG0380017884.01.T01:CDS 40.0%
! AGTAGAAACGGATTTCGCAA+TGG - Chr3:101858275-101858294 None:intergenic 40.0%
! GTAATTGAGATACTTGCTGG+GGG + Chr3:101861355-101861374 MsG0380017884.01.T01:CDS 40.0%
! GTCCAGCTTTAATACTTGAC+TGG - Chr3:101858453-101858472 None:intergenic 40.0%
! TAGATCAAGTGTTGTGCTGA+AGG + Chr3:101859489-101859508 MsG0380017884.01.T01:intron 40.0%
! TTGGAATGCTTTTGTTGCTG+TGG - Chr3:101858185-101858204 None:intergenic 40.0%
!! AGACCAAGTCTTATTCCACT+AGG - Chr3:101862355-101862374 None:intergenic 40.0%
!! CAAGTCTTATTCCACTAGGT+GGG - Chr3:101862351-101862370 None:intergenic 40.0%
!! GGCATGCTTTAGAATCATCT+TGG - Chr3:101859573-101859592 None:intergenic 40.0%
!! TAAAGGGTGCTGTTTACCAT+CGG + Chr3:101861491-101861510 MsG0380017884.01.T01:intron 40.0%
!! TCCTTTGGAGTTTGAATCGT+CGG - Chr3:101858302-101858321 None:intergenic 40.0%
!!! GGCTGGTTTTAATGTGTATG+TGG + Chr3:101858770-101858789 MsG0380017884.01.T01:intron 40.0%
AACACCGCAAAATCCACATG+AGG - Chr3:101858161-101858180 None:intergenic 45.0%
AAGGAAGGTGGTTGAAATGG+AGG + Chr3:101861863-101861882 MsG0380017884.01.T01:intron 45.0%
AAGGTGGTTGAAATGGAGGA+GGG + Chr3:101861867-101861886 MsG0380017884.01.T01:intron 45.0%
ACATTAAAACCAGCCTGCCT+AGG - Chr3:101858765-101858784 None:intergenic 45.0%
ACCCTTCAGAAGAACTTGAC+TGG - Chr3:101860413-101860432 None:intergenic 45.0%
AGAGTCAAAGCATGAAGGCA+AGG - Chr3:101862658-101862677 None:intergenic 45.0%
AGGTTTCAGCATCCTCATAC+AGG + Chr3:101862788-101862807 MsG0380017884.01.T01:intron 45.0%
AGTTGTGCAGTGTGCACTAA+AGG - Chr3:101858982-101859001 None:intergenic 45.0%
ATATGGAGGGACGAAAAGCA+TGG + Chr3:101862555-101862574 MsG0380017884.01.T01:CDS 45.0%
ATCTATGCAATGTCCAGCCA+TGG - Chr3:101861537-101861556 None:intergenic 45.0%
ATGTTGTCAATCCCACCTAG+TGG + Chr3:101862337-101862356 MsG0380017884.01.T01:intron 45.0%
CAACATTTGGCAGGTTGCAA+TGG - Chr3:101860323-101860342 None:intergenic 45.0%
CAAGCTACGCACTATCAAGA+GGG + Chr3:101860678-101860697 MsG0380017884.01.T01:CDS 45.0%
CACACATGACCAAACGATCT+AGG - Chr3:101862134-101862153 None:intergenic 45.0%
CACTACCAATTCTACGAAGC+TGG - Chr3:101862868-101862887 None:intergenic 45.0%
CAGAAGAACTTGACTGGGAT+GGG - Chr3:101860407-101860426 None:intergenic 45.0%
CATGGTCAAATTTCCATGGC+TGG + Chr3:101861521-101861540 MsG0380017884.01.T01:intron 45.0%
CATTGTGGTGATACTTGAGC+AGG + Chr3:101859782-101859801 MsG0380017884.01.T01:intron 45.0%
CCACCTAGTGGAATAAGACT+TGG + Chr3:101862349-101862368 MsG0380017884.01.T01:intron 45.0%
CCCAGTCAAGTTCTTCTGAA+GGG + Chr3:101860409-101860428 MsG0380017884.01.T01:CDS 45.0%
CCCTTCAGAAGAACTTGACT+GGG - Chr3:101860412-101860431 None:intergenic 45.0%
CCGCATTTAGAAGAGAAAGG+AGG - Chr3:101858651-101858670 None:intergenic 45.0%
CTAGATCGTTTGGTCATGTG+TGG + Chr3:101862132-101862151 MsG0380017884.01.T01:intron 45.0%
CTAGGTGATGAGGTATATGG+AGG + Chr3:101862541-101862560 MsG0380017884.01.T01:CDS 45.0%
CTGCTAGGTGATGAGGTATA+TGG + Chr3:101862538-101862557 MsG0380017884.01.T01:CDS 45.0%
CTGGAGAAGAAGGGTTAAGT+TGG + Chr3:101858731-101858750 MsG0380017884.01.T01:intron 45.0%
CTTGCAGTTGGCAAAGTGAT+AGG - Chr3:101859262-101859281 None:intergenic 45.0%
GAAGAAATTGTCGACGATGG+TGG + Chr3:101858355-101858374 MsG0380017884.01.T01:CDS 45.0%
GAAGCCGGTTATTAGGATCA+CGG - Chr3:101860768-101860787 None:intergenic 45.0%
GGCATATCATCTGGAGAAGA+AGG + Chr3:101858721-101858740 MsG0380017884.01.T01:intron 45.0%
GGTTTCAGCATCCTCATACA+GGG + Chr3:101862789-101862808 MsG0380017884.01.T01:intron 45.0%
GTAACCCAGCCTCATAAACA+TGG + Chr3:101858671-101858690 MsG0380017884.01.T01:intron 45.0%
GTTGAGTGGAAGTTGGAAAC+TGG + Chr3:101861391-101861410 MsG0380017884.01.T01:CDS 45.0%
GTTTCAGCATCCTCATACAG+GGG + Chr3:101862790-101862809 MsG0380017884.01.T01:CDS 45.0%
TATACCTCATCACCTAGCAG+AGG - Chr3:101862538-101862557 None:intergenic 45.0%
TATTTGGGTGTACCTCTGCT+AGG + Chr3:101862523-101862542 MsG0380017884.01.T01:CDS 45.0%
TCAAGCTACGCACTATCAAG+AGG + Chr3:101860677-101860696 MsG0380017884.01.T01:CDS 45.0%
TCAGAAGAACTTGACTGGGA+TGG - Chr3:101860408-101860427 None:intergenic 45.0%
TCCCAGTCAAGTTCTTCTGA+AGG + Chr3:101860408-101860427 MsG0380017884.01.T01:CDS 45.0%
TCCGACGATTCAAACTCCAA+AGG + Chr3:101858298-101858317 MsG0380017884.01.T01:CDS 45.0%
TGAGTGCAAACTATGGAGCA+TGG - Chr3:101861093-101861112 None:intergenic 45.0%
TGCAAACTCAGAGTTGTTCG+TGG - Chr3:101862598-101862617 None:intergenic 45.0%
TGCCTTCATGCTTTGACTCT+CGG + Chr3:101862658-101862677 MsG0380017884.01.T01:CDS 45.0%
TGCGGCTAGTAGGTGATTTA+TGG + Chr3:101860834-101860853 MsG0380017884.01.T01:intron 45.0%
TGGATCTCTTCTCGCATCAA+TGG + Chr3:101858409-101858428 MsG0380017884.01.T01:CDS 45.0%
TGGGTTACTAGTTGTCGCTA+AGG + Chr3:101860500-101860519 MsG0380017884.01.T01:CDS 45.0%
TTATTAGGATCACGGCCAAC+AGG - Chr3:101860760-101860779 None:intergenic 45.0%
TTCGGAATTACCATGTGAGC+AGG - Chr3:101859939-101859958 None:intergenic 45.0%
TTGACCATGCTTTACTCCGA+TGG - Chr3:101861510-101861529 None:intergenic 45.0%
TTGAGCCAGCTTCGTAGAAT+TGG + Chr3:101862860-101862879 MsG0380017884.01.T01:CDS 45.0%
TTGGCCGTGATCCTAATAAC+CGG + Chr3:101860761-101860780 MsG0380017884.01.T01:CDS 45.0%
! ACGTCTGGGACACTTGTAAA+TGG + Chr3:101860288-101860307 MsG0380017884.01.T01:CDS 45.0%
! AGAAACGGATTTCGCAATGG+AGG - Chr3:101858272-101858291 None:intergenic 45.0%
! AGATTAGACAAAGGCACGAG+TGG + Chr3:101860480-101860499 MsG0380017884.01.T01:CDS 45.0%
! AGTCTAGGGCAAACCATTGT+GGG + Chr3:101859152-101859171 MsG0380017884.01.T01:intron 45.0%
! CAATGGCCGTGTTGTTGATA+AGG + Chr3:101858483-101858502 MsG0380017884.01.T01:CDS 45.0%
! CAGAGGTACACCCAAATACT+TGG - Chr3:101862521-101862540 None:intergenic 45.0%
! GATCTAGAGGGCATATCATC+TGG + Chr3:101858712-101858731 MsG0380017884.01.T01:intron 45.0%
! GATTAGACAAAGGCACGAGT+GGG + Chr3:101860481-101860500 MsG0380017884.01.T01:CDS 45.0%
! GGTTGGTTAGGAAGATCTAG+AGG + Chr3:101858699-101858718 MsG0380017884.01.T01:intron 45.0%
! GTCAGGGACTAATTTGTCCT+CGG - Chr3:101858931-101858950 None:intergenic 45.0%
!! CCAAGTCTTATTCCACTAGG+TGG - Chr3:101862352-101862371 None:intergenic 45.0%
!! GACGATGGTGGAATCAAATC+TGG + Chr3:101858367-101858386 MsG0380017884.01.T01:CDS 45.0%
!! GCATGGTCTTGTCATTGCTA+CGG + Chr3:101862572-101862591 MsG0380017884.01.T01:CDS 45.0%
!! GGTTTGGTTCTTTGTCGTGT+AGG + Chr3:101862768-101862787 MsG0380017884.01.T01:intron 45.0%
!! TGCATTGGTTGAGTGGAAGT+TGG + Chr3:101861384-101861403 MsG0380017884.01.T01:CDS 45.0%
!! TTAAGTTGGCATGCCAACCT+AGG + Chr3:101858745-101858764 MsG0380017884.01.T01:intron 45.0%
!!! ATAATATTTTAATCAATAAT+GGG - Chr3:101862981-101863000 None:intergenic 5.0%
!!! TATAATATTTTAATCAATAA+TGG - Chr3:101862982-101863001 None:intergenic 5.0%
AATTTCTTCCAACCGCACGC+CGG - Chr3:101858344-101858363 None:intergenic 50.0%
ACCCGAGAGTCAAAGCATGA+AGG - Chr3:101862663-101862682 None:intergenic 50.0%
AGAAACTGGAGTAGGTACCC+CGG - Chr3:101860722-101860741 None:intergenic 50.0%
ATCACCTACTAGCCGCATGA+CGG - Chr3:101860831-101860850 None:intergenic 50.0%
CGGATTTCGCAATGGAGGAA+CGG - Chr3:101858267-101858286 None:intergenic 50.0%
CGTGCGCATGCCAAGTATTT+GGG + Chr3:101862508-101862527 MsG0380017884.01.T01:CDS 50.0%
CTACAGCGATCATACGAAGC+CGG - Chr3:101860783-101860802 None:intergenic 50.0%
CTATGGCATCAATTCGCCCA+GGG + Chr3:101860448-101860467 MsG0380017884.01.T01:CDS 50.0%
CTCACTAGATAGAGCTTCCG+CGG - Chr3:101858110-101858129 None:intergenic 50.0%
CTTCGTATGATCGCTGTAGC+TGG + Chr3:101860784-101860803 MsG0380017884.01.T01:CDS 50.0%
GAAGGTGGTTGAAATGGAGG+AGG + Chr3:101861866-101861885 MsG0380017884.01.T01:intron 50.0%
GACAAGAGCTATACAGCACC+AGG - Chr3:101859130-101859149 None:intergenic 50.0%
GATCGTTTGGTCATGTGTGG+AGG + Chr3:101862135-101862154 MsG0380017884.01.T01:intron 50.0%
GCCTTCATGCTTTGACTCTC+GGG + Chr3:101862659-101862678 MsG0380017884.01.T01:CDS 50.0%
GCTGGACTCGTTCATGTCAA+TGG + Chr3:101858466-101858485 MsG0380017884.01.T01:CDS 50.0%
GGGTACCTACTCCAGTTTCT+GGG + Chr3:101860722-101860741 MsG0380017884.01.T01:CDS 50.0%
TAAAACCAGCCTGCCTAGGT+TGG - Chr3:101858761-101858780 None:intergenic 50.0%
TCGTGCGCATGCCAAGTATT+TGG + Chr3:101862507-101862526 MsG0380017884.01.T01:CDS 50.0%
TCTATGGCATCAATTCGCCC+AGG + Chr3:101860447-101860466 MsG0380017884.01.T01:CDS 50.0%
TGTACCTCTGCTAGGTGATG+AGG + Chr3:101862531-101862550 MsG0380017884.01.T01:CDS 50.0%
TGTGCCGGAAAACATACCTC+TGG + Chr3:101859872-101859891 MsG0380017884.01.T01:CDS 50.0%
TTCTGTGAAAGCCCGTCATG+CGG + Chr3:101860816-101860835 MsG0380017884.01.T01:CDS 50.0%
TTCTTAGGTGGAGAGTCGAG+AGG + Chr3:101861617-101861636 MsG0380017884.01.T01:intron 50.0%
! ACGCCGGCGTAATTCGTTTT+TGG - Chr3:101858328-101858347 None:intergenic 50.0%
! GAGTCTAGGGCAAACCATTG+TGG + Chr3:101859151-101859170 MsG0380017884.01.T01:intron 50.0%
! GTCTACGTTAGTCTCACTGC+CGG + Chr3:101860700-101860719 MsG0380017884.01.T01:CDS 50.0%
! TCTACGTTAGTCTCACTGCC+GGG + Chr3:101860701-101860720 MsG0380017884.01.T01:CDS 50.0%
!! GTAGCTGTGCATTGGTTGAG+TGG + Chr3:101861377-101861396 MsG0380017884.01.T01:CDS 50.0%
AAACGAATTACGCCGGCGTG+CGG + Chr3:101858329-101858348 MsG0380017884.01.T01:CDS 55.0%
ACACGCCCAGAAACTGGAGT+AGG - Chr3:101860730-101860749 None:intergenic 55.0%
ACCTCAACACGCCCAGAAAC+TGG - Chr3:101860736-101860755 None:intergenic 55.0%
AGAAAGGGCAACAGGCAACC+TGG + Chr3:101859109-101859128 MsG0380017884.01.T01:intron 55.0%
AGTGTCCCAGACGTATTGCC+AGG - Chr3:101860282-101860301 None:intergenic 55.0%
CAGCACCTGGCAATACGTCT+GGG + Chr3:101860274-101860293 MsG0380017884.01.T01:CDS 55.0%
GGAAACTGGACGCACTCATC+AGG + Chr3:101861405-101861424 MsG0380017884.01.T01:CDS 55.0%
TAGGTTGTGCATCCAGCACC+TGG + Chr3:101860261-101860280 MsG0380017884.01.T01:intron 55.0%
TCACCTACTAGCCGCATGAC+GGG - Chr3:101860830-101860849 None:intergenic 55.0%
! CTACGTTAGTCTCACTGCCG+GGG + Chr3:101860702-101860721 MsG0380017884.01.T01:CDS 55.0%
! GGGGTACCTACTCCAGTTTC+TGG + Chr3:101860721-101860740 MsG0380017884.01.T01:CDS 55.0%
! TCCAGTTTCTGGGCGTGTTG+AGG + Chr3:101860732-101860751 MsG0380017884.01.T01:CDS 55.0%
!! AGGTGCTGGATGCACAACCT+AGG - Chr3:101860262-101860281 None:intergenic 55.0%
AAGCCCGTCATGCGGCTAGT+AGG + Chr3:101860824-101860843 MsG0380017884.01.T01:CDS 60.0%
CCAGACGTATTGCCAGGTGC+TGG - Chr3:101860276-101860295 None:intergenic 60.0%
CCAGCACCTGGCAATACGTC+TGG + Chr3:101860273-101860292 MsG0380017884.01.T01:CDS 60.0%
GCAGCAGTTGAGAGCTGTGC+CGG + Chr3:101859857-101859876 MsG0380017884.01.T01:CDS 60.0%
GCATCCTCATACAGGGGAGC+AGG + Chr3:101862796-101862815 MsG0380017884.01.T01:CDS 60.0%
GGGCGTGTTGAGGTTCCTGT+TGG + Chr3:101860742-101860761 MsG0380017884.01.T01:CDS 60.0%
GTTGGCATGCCAACCTAGGC+AGG + Chr3:101858749-101858768 MsG0380017884.01.T01:intron 60.0%
TGCACCTGCTCCCCTGTATG+AGG - Chr3:101862803-101862822 None:intergenic 60.0%
TGCTGGGGGTAGCTGTGCAT+TGG + Chr3:101861369-101861388 MsG0380017884.01.T01:CDS 60.0%
GAATTACGCCGGCGTGCGGT+TGG + Chr3:101858333-101858352 MsG0380017884.01.T01:CDS 65.0%
GCATGCCAACCTAGGCAGGC+TGG + Chr3:101858753-101858772 MsG0380017884.01.T01:intron 65.0%
Chromosome Type Strat End Strand Name
Chr3 gene 101858064 101863034 101858064 ID=MsG0380017884.01;Name=MsG0380017884.01
Chr3 mRNA 101858064 101863034 101858064 ID=MsG0380017884.01.T01;Parent=MsG0380017884.01;Name=MsG0380017884.01.T01;_AED=0.36;_eAED=0.36;_QI=0|1|0.85|1|1|1|7|100|481
Chr3 exon 101858064 101858504 101858064 ID=MsG0380017884.01.T01:exon:5436;Parent=MsG0380017884.01.T01
Chr3 exon 101859804 101859947 101859804 ID=MsG0380017884.01.T01:exon:5437;Parent=MsG0380017884.01.T01
Chr3 exon 101860264 101860521 101860264 ID=MsG0380017884.01.T01:exon:5438;Parent=MsG0380017884.01.T01
Chr3 exon 101860643 101860845 101860643 ID=MsG0380017884.01.T01:exon:5439;Parent=MsG0380017884.01.T01
Chr3 exon 101861348 101861426 101861348 ID=MsG0380017884.01.T01:exon:5440;Parent=MsG0380017884.01.T01
Chr3 exon 101862505 101862680 101862505 ID=MsG0380017884.01.T01:exon:5441;Parent=MsG0380017884.01.T01
Chr3 exon 101862790 101863034 101862790 ID=MsG0380017884.01.T01:exon:5442;Parent=MsG0380017884.01.T01
Chr3 CDS 101858064 101858504 101858064 ID=MsG0380017884.01.T01:cds;Parent=MsG0380017884.01.T01
Chr3 CDS 101859804 101859947 101859804 ID=MsG0380017884.01.T01:cds;Parent=MsG0380017884.01.T01
Chr3 CDS 101860264 101860521 101860264 ID=MsG0380017884.01.T01:cds;Parent=MsG0380017884.01.T01
Chr3 CDS 101860643 101860845 101860643 ID=MsG0380017884.01.T01:cds;Parent=MsG0380017884.01.T01
Chr3 CDS 101861348 101861426 101861348 ID=MsG0380017884.01.T01:cds;Parent=MsG0380017884.01.T01
Chr3 CDS 101862505 101862680 101862505 ID=MsG0380017884.01.T01:cds;Parent=MsG0380017884.01.T01
Chr3 CDS 101862790 101862934 101862790 ID=MsG0380017884.01.T01:cds;Parent=MsG0380017884.01.T01
Chr3 three_prime_UTR 101862935 101863034 101862935 ID=MsG0380017884.01.T01:three_prime_utr;Parent=MsG0380017884.01.T01
Gene Sequence

>MsG0380017884.01.T01

ATGGAATGGAAGGAATTGAATGACACAAGTTTTCATTTCAAAGCCGCGGAAGCTCTATCTAGTGAGTATTATCGTGAAATGTTATCGCTTAACACCTCATGTGGATTTTGCGGTGTTTCCACAGCAACAAAAGCATTCCAATTTCACTTTAGAACTTCAACTTCACCATTTTACTTCTCTCCCGTTAACAACTATAAATTCCGTTCCTCCATTGCGAAATCCGTTTCTACTTTCTCCGACGATTCAAACTCCAAAGGAGAACCAAAAACGAATTACGCCGGCGTGCGGTTGGAAGAAATTGTCGACGATGGTGGAATCAAATCTGGAAAATTGAGACTCGATAGTTGGATCTCTTCTCGCATCAATGGCATCAGTAGAGCTCGTGTCCAGTCAAGTATTAAAGCTGGACTCGTTCATGTCAATGGCCGTGTTGTTGATAAGGTTTCTTTCAATGTCAGAGCTGGGGATGAGATCAAATGTACGATTGCGGAGTTGCAGCAGTTGAGAGCTGTGCCGGAAAACATACCTCTGGATATAGTTTATGAAGATGACCATTTGCTAGTCATAAATAAACCTGCTCACATGGTTGTGCATCCAGCACCTGGCAATACGTCTGGGACACTTGTAAATGGCATTCTGCACCATTGCAACCTGCCAAATGTTGAATTTTCTAAAGAGGAAGCTCTTTCAGATACAGAAGAATCTGATGATGAACTTAATGGTTTCCCATCCCAGTCAAGTTCTTCTGAAGGGTTAGATTCTAGATTGTCTATGGCATCAATTCGCCCAGGGATTGTACACAGATTAGACAAAGGCACGAGTGGGTTACTAGTTGTCGCTAAGGATGAACATTCTCATATGAAATTGTCTGAACAATTCAAGCTACGCACTATCAAGAGGGTCTACGTTAGTCTCACTGCCGGGGTACCTACTCCAGTTTCTGGGCGTGTTGAGGTTCCTGTTGGCCGTGATCCTAATAACCGGCTTCGTATGATCGCTGTAGCTGGACTAGTTAATTCTGTGAAAGCCCGTCATGCGGCTAGTAGGTACAAAGTAATTGAGATACTTGCTGGGGGTAGCTGTGCATTGGTTGAGTGGAAGTTGGAAACTGGACGCACTCATCAGATTCGTGCGCATGCCAAGTATTTGGGTGTACCTCTGCTAGGTGATGAGGTATATGGAGGGACGAAAAGCATGGTCTTGTCATTGCTACGGCCACGAACAACTCTGAGTTTGCATAGCGAAATGTTTAAAACAGTTTCTGAGCTAGATAGGCCTTGCCTTCATGCTTTGACTCTCGGGTTTCAGCATCCTCATACAGGGGAGCAGGTGCACTTTTCATGTGAGCCCCCTGTAGATTTTAATGACATTTTGAGCCAGCTTCGTAGAATTGGTAGTGAAAGTATTTCTCACTCAAAGGCCAAATTTTTAAAAGGGGTATTGTAA

Protein sequence

>MsG0380017884.01.T01

MEWKELNDTSFHFKAAEALSSEYYREMLSLNTSCGFCGVSTATKAFQFHFRTSTSPFYFSPVNNYKFRSSIAKSVSTFSDDSNSKGEPKTNYAGVRLEEIVDDGGIKSGKLRLDSWISSRINGISRARVQSSIKAGLVHVNGRVVDKVSFNVRAGDEIKCTIAELQQLRAVPENIPLDIVYEDDHLLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKEEALSDTEESDDELNGFPSQSSSSEGLDSRLSMASIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQFKLRTIKRVYVSLTAGVPTPVSGRVEVPVGRDPNNRLRMIAVAGLVNSVKARHAASRYKVIEILAGGSCALVEWKLETGRTHQIRAHAKYLGVPLLGDEVYGGTKSMVLSLLRPRTTLSLHSEMFKTVSELDRPCLHALTLGFQHPHTGEQVHFSCEPPVDFNDILSQLRRIGSESISHSKAKFLKGVL*