AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar ZhongmuNo.1 / MsG0780037845.01


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037845.01.T01 MTR_1g050478 76.697 545 111 4 13 541 3 547 0.0 803
MsG0780037845.01.T01 MTR_3g110740 64.381 525 176 6 21 538 43 563 0.0 620
MsG0780037845.01.T01 MTR_7g029535 55.172 609 200 11 1 543 1 602 0.0 564
MsG0780037845.01.T01 MTR_6g016725 54.486 613 200 13 1 543 1 604 0.0 560
MsG0780037845.01.T01 MTR_3g036270 54.992 611 200 11 1 543 1 604 0.0 554
MsG0780037845.01.T01 MTR_4g059340 57.299 548 170 9 19 537 8 520 0.0 540
MsG0780037845.01.T01 MTR_6g016905 58.192 531 202 9 22 537 9 534 0.0 537
MsG0780037845.01.T01 MTR_5g095830 56.752 548 198 11 2 537 36 556 3.04e-180 522
MsG0780037845.01.T01 MTR_4g133640 57.034 526 203 14 22 537 34 546 3.19e-175 508
MsG0780037845.01.T01 MTR_2g007590 56.654 526 205 14 22 537 34 546 4.29e-170 494
MsG0780037845.01.T01 MTR_3g006050 53.623 552 222 8 17 537 1 549 1.88e-167 488
MsG0780037845.01.T01 MTR_8g017160 53.422 526 230 9 21 537 27 546 3.00e-167 487
MsG0780037845.01.T01 MTR_4g006240 55.283 530 212 9 22 537 7 525 1.37e-165 482
MsG0780037845.01.T01 MTR_8g037780 52.670 543 239 11 4 537 7 540 1.96e-165 483
MsG0780037845.01.T01 MTR_4g006450 56.061 528 195 11 22 537 8 510 6.91e-164 478
MsG0780037845.01.T01 MTR_5g075860 54.174 539 211 11 17 540 1 518 1.96e-163 476
MsG0780037845.01.T01 MTR_7g029085 74.204 314 67 3 15 314 13 326 1.08e-147 427
MsG0780037845.01.T01 MTR_7g029075 74.204 314 67 3 15 314 13 326 1.08e-147 427
MsG0780037845.01.T01 MTR_1g115380 50.000 538 223 15 20 537 5 516 1.70e-141 421
MsG0780037845.01.T01 MTR_4g019320 49.627 536 228 10 17 537 1 509 2.92e-141 419
MsG0780037845.01.T01 MTR_5g430490 47.698 543 253 12 14 537 5 535 1.15e-132 398
MsG0780037845.01.T01 MTR_3g465770 47.448 529 256 14 22 537 13 532 2.41e-127 385
MsG0780037845.01.T01 MTR_5g088250 45.507 523 231 13 27 537 16 496 3.50e-115 352
MsG0780037845.01.T01 MTR_4g009030 41.744 539 277 14 17 537 1 520 8.15e-112 344
MsG0780037845.01.T01 MTR_3g083280 42.966 526 220 14 22 537 7 462 4.54e-109 335
MsG0780037845.01.T01 MTR_8g045150 54.722 360 138 4 189 537 100 445 1.33e-107 331
MsG0780037845.01.T01 MTR_4g006290 48.747 439 180 11 103 537 5 402 6.13e-105 323
MsG0780037845.01.T01 MTR_5g067490 52.685 391 142 12 37 396 2 380 1.44e-96 298
MsG0780037845.01.T01 MTR_1g115390 54.348 322 138 5 214 528 26 345 1.05e-93 290
MsG0780037845.01.T01 MTR_4g009055 49.211 380 156 11 99 468 1 353 3.05e-92 288
MsG0780037845.01.T01 MTR_3g073390 40.331 543 240 17 10 537 2 475 7.48e-92 291
MsG0780037845.01.T01 MTR_3g074000 44.820 444 226 10 13 447 3 436 8.40e-92 288
MsG0780037845.01.T01 MTR_6g025290 64.706 221 70 2 318 536 191 405 8.64e-88 277
MsG0780037845.01.T01 MTR_6g025290 36.993 419 212 13 1 382 1 404 2.24e-48 173
MsG0780037845.01.T01 MTR_6g016705 63.755 229 74 2 318 537 163 391 4.24e-87 275
MsG0780037845.01.T01 MTR_6g016705 34.815 405 172 15 49 388 18 395 9.05e-38 144
MsG0780037845.01.T01 MTR_5g046730 63.014 219 77 2 323 539 205 421 3.82e-85 270
MsG0780037845.01.T01 MTR_5g046730 38.071 394 204 14 22 384 35 419 3.76e-41 154
MsG0780037845.01.T01 MTR_3g074570 40.546 476 203 13 85 542 2 415 3.74e-84 268
MsG0780037845.01.T01 MTR_4g129140 45.409 403 137 9 142 542 106 427 6.94e-84 267
MsG0780037845.01.T01 MTR_6g016750 61.111 216 80 2 322 537 194 405 2.93e-81 260
MsG0780037845.01.T01 MTR_6g016750 34.112 428 211 18 1 387 11 408 3.09e-36 140
MsG0780037845.01.T01 MTR_6g022820 59.160 262 103 3 279 537 193 453 7.85e-81 261
MsG0780037845.01.T01 MTR_6g022820 34.402 468 210 15 4 387 2 456 2.34e-39 150
MsG0780037845.01.T01 MTR_6g042905 62.212 217 79 2 323 537 186 401 1.09e-80 259
MsG0780037845.01.T01 MTR_6g042905 33.800 429 214 16 3 387 2 404 1.01e-32 130
MsG0780037845.01.T01 MTR_6g016685 62.673 217 72 3 323 537 120 329 1.43e-79 253
MsG0780037845.01.T01 MTR_6g016685 28.655 342 196 12 81 390 10 335 3.67e-16 80.5
MsG0780037845.01.T01 MTR_6g016910 61.883 223 82 2 318 537 178 400 6.57e-79 254
MsG0780037845.01.T01 MTR_6g016910 34.452 447 234 16 12 430 2 417 3.40e-37 143
MsG0780037845.01.T01 MTR_5g095810 55.109 274 81 4 265 536 3 236 3.53e-75 240
MsG0780037845.01.T01 MTR_1g023530 41.818 440 190 14 1 397 1 417 1.04e-73 241
MsG0780037845.01.T01 MTR_1g023530 51.163 172 58 3 369 537 257 405 2.59e-35 138
MsG0780037845.01.T01 MTR_4g008430 49.363 314 144 7 156 465 1 303 1.15e-73 236
MsG0780037845.01.T01 MTR_4g024200 42.093 430 177 14 21 388 9 428 5.61e-73 240
MsG0780037845.01.T01 MTR_4g024200 50.455 220 106 2 321 537 205 424 1.32e-57 199
MsG0780037845.01.T01 MTR_6g027420 42.324 482 219 22 2 473 8 440 1.01e-72 240
MsG0780037845.01.T01 MTR_6g027420 58.065 186 72 5 356 537 247 430 2.12e-44 164
MsG0780037845.01.T01 MTR_6g016740 55.405 222 80 2 318 537 155 359 1.36e-72 236
MsG0780037845.01.T01 MTR_6g016740 35.663 415 186 16 1 387 1 362 7.23e-35 135
MsG0780037845.01.T01 MTR_7g044870 59.070 215 85 2 330 542 170 383 1.96e-72 237
MsG0780037845.01.T01 MTR_7g044870 38.015 413 188 18 3 395 2 366 1.46e-44 162
MsG0780037845.01.T01 MTR_4g021835 41.531 431 190 17 3 388 4 417 5.07e-71 235
MsG0780037845.01.T01 MTR_4g021835 44.091 220 95 4 346 537 194 413 3.26e-39 149
MsG0780037845.01.T01 MTR_5g068550 49.147 293 119 8 22 292 7 291 6.15e-71 230
MsG0780037845.01.T01 MTR_8g076010 44.612 399 172 14 22 388 15 396 1.32e-68 228
MsG0780037845.01.T01 MTR_8g076010 47.368 209 96 4 335 537 192 392 2.25e-44 163
MsG0780037845.01.T01 MTR_6g016915 57.426 202 83 2 341 540 171 371 1.94e-67 223
MsG0780037845.01.T01 MTR_6g016915 34.491 403 196 15 3 389 23 373 1.44e-33 132
MsG0780037845.01.T01 MTR_8g045190 52.756 254 98 8 15 255 13 257 4.72e-65 213
MsG0780037845.01.T01 MTR_4g435328 44.660 309 152 8 62 364 1 296 5.15e-60 201
MsG0780037845.01.T01 MTR_3g074550 45.775 284 135 6 196 473 81 351 2.11e-59 201
MsG0780037845.01.T01 MTR_4g008600 53.982 226 92 4 232 451 4 223 2.81e-59 197
MsG0780037845.01.T01 MTR_6g054950 47.566 267 85 5 275 537 135 350 5.89e-59 200
MsG0780037845.01.T01 MTR_6g054950 37.838 370 174 12 4 335 2 353 6.66e-42 154
MsG0780037845.01.T01 MTR_6g016760 64.052 153 54 1 385 537 1 152 8.86e-59 196
MsG0780037845.01.T01 MTR_3g110148 67.832 143 46 0 395 537 189 331 1.95e-56 194
MsG0780037845.01.T01 MTR_3g110148 39.452 365 161 16 17 341 1 345 1.01e-48 173
MsG0780037845.01.T01 MTR_1g028400 39.846 389 175 14 2 366 100 453 2.96e-55 193
MsG0780037845.01.T01 MTR_1g028400 42.347 196 79 4 344 537 282 445 5.03e-28 117
MsG0780037845.01.T01 MTR_1g069145 47.619 231 92 4 318 542 269 476 9.53e-54 190
MsG0780037845.01.T01 MTR_1g069145 33.333 405 223 13 3 390 103 477 6.98e-37 144
MsG0780037845.01.T01 MTR_4g021765 51.892 185 86 3 356 537 102 286 3.75e-53 184
MsG0780037845.01.T01 MTR_4g021765 34.328 335 162 9 147 430 3 330 2.82e-34 132
MsG0780037845.01.T01 MTR_1g069090 47.186 231 93 4 318 542 39 246 7.05e-52 179
MsG0780037845.01.T01 MTR_3g081430 53.439 189 84 3 277 465 90 274 1.44e-46 165
MsG0780037845.01.T01 MTR_8g446780 49.029 206 95 3 338 537 21 222 1.49e-44 157
MsG0780037845.01.T01 MTR_8g446780 40.310 129 73 2 207 335 27 151 5.55e-16 78.2
MsG0780037845.01.T01 MTR_6g016720 64.706 119 40 1 371 487 99 217 2.49e-44 157
MsG0780037845.01.T01 MTR_8g060730 38.649 370 179 13 17 373 1 335 1.39e-43 158
MsG0780037845.01.T01 MTR_8g060730 43.564 202 90 6 337 537 142 320 4.10e-31 124
MsG0780037845.01.T01 MTR_6g016765 50.000 190 77 6 4 185 45 224 6.57e-43 153
MsG0780037845.01.T01 MTR_4g006210 39.942 343 131 13 3 328 2 286 3.91e-42 157
MsG0780037845.01.T01 MTR_4g006210 54.190 179 69 5 337 506 157 331 1.64e-41 155
MsG0780037845.01.T01 MTR_6g018580 53.226 186 68 5 1 173 1 180 7.26e-42 149
MsG0780037845.01.T01 MTR_5g095790 44.488 254 88 9 22 273 20 222 1.51e-41 150
MsG0780037845.01.T01 MTR_4g435338 54.717 159 69 2 385 542 121 277 3.33e-41 151
MsG0780037845.01.T01 MTR_4g435338 31.333 300 163 11 9 281 18 301 3.82e-20 92.0
MsG0780037845.01.T01 MTR_4g005810 58.741 143 58 1 399 540 11 153 9.52e-41 149
MsG0780037845.01.T01 MTR_1g075040 47.500 200 97 4 275 466 164 363 1.42e-40 150
MsG0780037845.01.T01 MTR_1g075040 40.690 290 123 11 6 260 41 316 5.28e-38 144
MsG0780037845.01.T01 MTR_4g010410 46.364 220 104 8 15 229 18 228 1.62e-40 147
MsG0780037845.01.T01 MTR_2g078550 60.294 136 52 2 392 526 2 136 1.67e-40 144
MsG0780037845.01.T01 MTR_7g100890 31.368 424 245 13 132 540 2 394 2.41e-40 153
MsG0780037845.01.T01 MTR_0295s0010 64.407 118 40 2 409 524 8 125 2.88e-40 147
MsG0780037845.01.T01 MTR_5g087540 44.175 206 84 2 337 537 15 194 1.40e-39 144
MsG0780037845.01.T01 MTR_8g067230 40.803 299 127 11 156 419 25 308 3.60e-39 145
MsG0780037845.01.T01 MTR_8g067230 72.727 88 23 1 450 537 180 266 5.13e-32 125
MsG0780037845.01.T01 MTR_2g104970 56.589 129 51 2 420 543 3 131 5.86e-38 137
MsG0780037845.01.T01 MTR_4g035280 46.330 218 91 8 22 228 27 229 2.05e-37 139
MsG0780037845.01.T01 MTR_4g011120 42.723 213 108 4 22 229 8 211 1.36e-36 135
MsG0780037845.01.T01 MTR_4g024220 55.556 126 55 1 412 536 28 153 2.57e-35 131
MsG0780037845.01.T01 MTR_6g080560 40.161 249 117 9 22 244 7 249 3.24e-35 134
MsG0780037845.01.T01 MTR_6g080560 57.018 114 45 2 428 537 144 257 3.83e-30 120
MsG0780037845.01.T01 MTR_4g008450 54.487 156 66 3 383 537 100 251 3.75e-35 134
MsG0780037845.01.T01 MTR_4g008450 28.000 300 174 7 22 300 19 297 1.60e-12 68.9
MsG0780037845.01.T01 MTR_4g035290 44.651 215 102 6 22 229 27 231 7.35e-35 134
MsG0780037845.01.T01 MTR_4g008440 43.636 220 99 8 22 222 7 220 7.55e-35 131
MsG0780037845.01.T01 MTR_4g008440 48.485 99 49 2 426 523 139 236 2.47e-20 90.9
MsG0780037845.01.T01 MTR_4g008420 61.261 111 41 2 428 537 146 255 1.11e-34 133
MsG0780037845.01.T01 MTR_4g008420 34.892 278 107 9 22 253 33 282 1.66e-27 112
MsG0780037845.01.T01 MTR_4g010615 40.909 264 111 11 12 239 16 270 3.15e-34 130
MsG0780037845.01.T01 MTR_1g069120 38.603 272 108 10 3 239 103 350 4.99e-34 134
MsG0780037845.01.T01 MTR_1g069120 50.000 146 68 2 318 458 269 414 1.13e-31 127
MsG0780037845.01.T01 MTR_3g081260 40.394 203 104 4 294 481 22 222 7.02e-34 129
MsG0780037845.01.T01 MTR_3g110150 39.331 239 117 7 49 262 19 254 8.85e-33 127
MsG0780037845.01.T01 MTR_3g110150 53.125 128 59 1 410 536 114 241 6.58e-31 122
MsG0780037845.01.T01 MTR_1155s0010 57.937 126 48 3 22 143 15 139 1.06e-32 122
MsG0780037845.01.T01 MTR_0345s0020 57.937 126 48 3 22 143 15 139 1.06e-32 122
MsG0780037845.01.T01 MTR_0105s0110 57.937 126 48 3 22 143 15 139 1.06e-32 122
MsG0780037845.01.T01 MTR_4g010630 42.453 212 106 6 23 227 9 211 1.24e-32 125
MsG0780037845.01.T01 MTR_8g080900 54.545 143 55 6 4 143 2 137 2.70e-32 121
MsG0780037845.01.T01 MTR_4g008330 58.559 111 45 1 428 537 1 111 3.10e-32 122
MsG0780037845.01.T01 MTR_4g010750 41.494 241 113 7 8 227 6 239 6.47e-32 124
MsG0780037845.01.T01 MTR_8g045170 45.933 209 55 5 62 262 75 233 3.63e-31 124
MsG0780037845.01.T01 MTR_8g045170 50.000 86 39 1 370 451 236 321 4.13e-16 80.5
MsG0780037845.01.T01 MTR_4g010590 42.986 221 96 9 20 227 7 210 4.42e-31 120
MsG0780037845.01.T01 MTR_6g033270 44.444 207 79 10 15 203 4 192 6.27e-31 121
MsG0780037845.01.T01 MTR_4g008340 37.380 313 157 9 1 281 1 306 9.21e-31 122
MsG0780037845.01.T01 MTR_4g008340 50.442 113 54 2 426 537 166 277 4.26e-27 112
MsG0780037845.01.T01 MTR_4g006250 62.376 101 37 1 438 537 1 101 1.26e-30 117
MsG0780037845.01.T01 MTR_6g016900 69.880 83 25 0 446 528 24 106 1.38e-30 120
MsG0780037845.01.T01 MTR_4g008400 39.592 245 116 10 22 244 7 241 2.07e-30 120
MsG0780037845.01.T01 MTR_4g008400 53.097 113 51 2 426 537 138 249 7.26e-28 114
MsG0780037845.01.T01 MTR_4g006520 53.435 131 50 5 22 147 8 132 2.78e-30 116
MsG0780037845.01.T01 MTR_5g067910 58.929 112 43 2 140 250 1 110 2.86e-30 115
MsG0780037845.01.T01 MTR_7g024310 60.000 120 40 4 58 172 2 118 5.05e-30 117
MsG0780037845.01.T01 MTR_4g006280 53.390 118 54 1 421 537 177 294 1.61e-29 119
MsG0780037845.01.T01 MTR_4g006280 31.227 269 127 8 22 261 66 305 8.39e-18 85.1
MsG0780037845.01.T01 MTR_4g010510 41.014 217 103 8 20 222 10 215 2.66e-29 115
MsG0780037845.01.T01 MTR_1g042340 43.627 204 87 9 21 216 9 192 3.14e-29 115
MsG0780037845.01.T01 MTR_6g042880 48.571 175 70 8 3 165 2 168 6.50e-29 113
MsG0780037845.01.T01 MTR_4g010710 38.494 239 107 9 18 227 3 230 2.65e-28 114
MsG0780037845.01.T01 MTR_4g008470 48.718 156 60 7 1 140 1 152 4.24e-28 112
MsG0780037845.01.T01 MTR_5g067480 54.455 101 46 0 381 481 71 171 4.61e-28 112
MsG0780037845.01.T01 MTR_7g029070 87.273 55 7 0 376 430 4 58 2.53e-27 104
MsG0780037845.01.T01 MTR_4g016500 36.330 267 114 10 3 227 17 269 2.95e-27 115
MsG0780037845.01.T01 MTR_4g008490 54.918 122 44 5 426 537 1 121 8.24e-27 107
MsG0780037845.01.T01 MTR_5g067860 60.360 111 40 3 141 250 47 154 1.06e-26 109
MsG0780037845.01.T01 MTR_4g010970 42.857 168 77 5 2 164 15 168 1.32e-26 107
MsG0780037845.01.T01 MTR_3g008790 43.478 161 69 5 99 243 11 165 6.17e-26 104
MsG0780037845.01.T01 MTR_3g008790 40.171 117 40 1 426 542 67 153 2.32e-17 80.1
MsG0780037845.01.T01 MTR_8g446800 53.906 128 53 5 129 252 42 167 1.66e-25 103
MsG0780037845.01.T01 MTR_4g012820 48.026 152 64 5 197 333 1 152 3.36e-25 103
MsG0780037845.01.T01 MTR_4g012820 62.295 61 22 1 438 497 125 185 2.62e-14 72.0
MsG0780037845.01.T01 MTR_4g016660 39.669 242 105 11 18 232 6 233 8.19e-25 105
MsG0780037845.01.T01 MTR_4g010880 39.382 259 100 12 8 232 4 239 2.10e-24 103
MsG0780037845.01.T01 MTR_5g039080 47.429 175 65 10 10 173 8 166 2.44e-24 101
MsG0780037845.01.T01 MTR_4g132730 65.116 86 27 2 452 537 134 216 5.86e-24 103
MsG0780037845.01.T01 MTR_4g008290 45.926 135 61 5 4 132 2 130 6.31e-24 97.8
MsG0780037845.01.T01 MTR_4g006460 36.100 241 114 10 8 234 3 217 1.04e-23 100
MsG0780037845.01.T01 MTR_4g006460 44.954 109 40 2 435 542 125 214 5.85e-17 81.3
MsG0780037845.01.T01 MTR_6g018570 71.831 71 20 0 466 536 376 446 6.66e-23 102
MsG0780037845.01.T01 MTR_4g010460 41.765 170 80 5 20 179 29 189 8.28e-23 96.7
MsG0780037845.01.T01 MTR_7g029070 86.957 46 6 0 376 421 4 49 1.49e-21 88.6
MsG0780037845.01.T01 MTR_4g010450 35.193 233 118 7 8 220 8 227 3.60e-20 90.5
MsG0780037845.01.T01 MTR_4g008480 50.485 103 48 1 370 469 138 240 2.08e-19 89.0
MsG0780037845.01.T01 MTR_4g008480 31.273 275 135 11 22 268 31 279 1.78e-17 83.6
MsG0780037845.01.T01 MTR_2g021030 25.653 421 263 15 151 537 127 531 7.70e-18 87.4
MsG0780037845.01.T01 MTR_0041s0060 66.667 54 18 0 484 537 1 54 3.86e-17 75.9
MsG0780037845.01.T01 MTR_4g008380 61.905 63 24 0 480 542 4 66 6.11e-17 77.0
MsG0780037845.01.T01 MTR_4g016667 43.796 137 67 5 95 229 68 196 1.62e-16 79.3
MsG0780037845.01.T01 MTR_0807s0010 62.903 62 22 1 477 537 1 62 6.48e-16 73.6
MsG0780037845.01.T01 MTR_4g010580 40.136 147 71 5 13 143 3 148 4.03e-15 73.2
MsG0780037845.01.T01 MTR_4g010420 53.012 83 30 3 151 229 4 81 1.11e-14 71.2
MsG0780037845.01.T01 MTR_4g010920 37.705 122 65 2 114 232 24 137 5.20e-14 70.1
MsG0780037845.01.T01 MTR_2g021030 25.617 324 201 12 151 447 127 437 6.99e-13 71.2
MsG0780037845.01.T01 MTR_0105s0050 48.235 85 43 1 172 255 3 87 8.72e-13 67.4
MsG0780037845.01.T01 MTR_0105s0180 48.235 85 43 1 172 255 3 87 9.15e-13 67.4
MsG0780037845.01.T01 MTR_0105s0120 48.235 85 43 1 172 255 3 87 9.41e-13 67.4
MsG0780037845.01.T01 MTR_0105s0010 47.059 85 44 1 172 255 3 87 2.96e-12 65.9
MsG0780037845.01.T01 MTR_1g028410 44.037 109 52 5 163 262 34 142 4.35e-12 65.9
MsG0780037845.01.T01 MTR_4g009010 37.805 164 84 8 22 174 8 164 7.92e-12 64.3
MsG0780037845.01.T01 MTR_2g103530 62.745 51 19 0 487 537 89 139 8.36e-12 65.1
MsG0780037845.01.T01 MTR_2g103530 35.976 164 91 5 22 173 9 170 5.67e-11 62.4
MsG0780037845.01.T01 MTR_7g112570 25.000 288 207 6 195 480 258 538 1.45e-11 67.4
MsG0780037845.01.T01 MTR_7g112570 25.000 288 207 6 195 480 258 538 1.57e-11 67.4
MsG0780037845.01.T01 MTR_7g112570 25.000 288 207 6 195 480 258 538 2.57e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MsG0780037845.01.T01 AT1G80630 35.902 532 305 15 21 542 2 507 2.02e-63 218
MsG0780037845.01.T01 AT4G15475 22.889 450 279 17 149 542 125 562 7.56e-15 77.8
MsG0780037845.01.T01 AT5G27920 23.954 526 335 14 54 524 33 548 5.02e-12 68.9
MsG0780037845.01.T01 AT5G23340 27.626 257 172 6 289 535 111 363 6.53e-12 68.2

Find 99 sgRNAs with CRISPR-Local

Find 112 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCCGTAAGGTTAATCTTTC+TGG 0.025312 7:+34391791 MsG0780037845.01.T01:CDS
TCTGATTCTTTGCCGGATTT+TGG 0.189785 7:+34392388 MsG0780037845.01.T01:CDS
TCAATTAAAGTCTCTCTATT+TGG 0.216940 7:+34392420 MsG0780037845.01.T01:CDS
GATGAGTTGTCTTTGTTTAT+TGG 0.251420 7:+34392235 MsG0780037845.01.T01:CDS
TTGAAGAGGTTATCTTGTTT+TGG 0.253581 7:+34391867 MsG0780037845.01.T01:CDS
AAATCAAGCAGCTTCAAATT+AGG 0.300474 7:-34392496 None:intergenic
GTAGTGATCATTCAGAAAAT+TGG 0.313720 7:-34392209 None:intergenic
TGATCTCCCAACATTGTCTA+AGG 0.318702 7:-34392276 None:intergenic
CAACGCACCATTCCCGCTAA+TGG 0.323430 7:+34391560 MsG0780037845.01.T01:CDS
CAGCCTTGTTTGCACTTGTT+AGG 0.341840 7:+34392305 MsG0780037845.01.T01:CDS
ATTTCAAAGTGAGGGAGTTT+AGG 0.343221 7:-34391457 None:intergenic
GAGATCAAAATGGAAAATAT+AGG 0.343659 7:+34392346 MsG0780037845.01.T01:CDS
TAAGGAGGTGTTCTAATATC+AGG 0.348599 7:+34392560 MsG0780037845.01.T01:CDS
AGGGAATTCTGATTCTTTGC+CGG 0.357335 7:+34392381 MsG0780037845.01.T01:CDS
AACCATTTGTTGTGATGATT+TGG 0.377984 7:-34391228 None:intergenic
GTGTCGAGGTTTGCGTCATT+TGG 0.391504 7:+34392174 MsG0780037845.01.T01:CDS
TTCACTTAGTGAGATCAAAA+TGG 0.401122 7:+34392336 MsG0780037845.01.T01:CDS
TACCAAATCATCACAACAAA+TGG 0.401359 7:+34391226 MsG0780037845.01.T01:CDS
AACATTCTGCAATGAGGAAC+AGG 0.411352 7:-34391661 None:intergenic
AGATTTACCTGATGAATGTT+GGG 0.413198 7:+34391256 MsG0780037845.01.T01:CDS
CAGATTTACCTGATGAATGT+TGG 0.417796 7:+34391255 MsG0780037845.01.T01:CDS
AACGCACCATTCCCGCTAAT+GGG 0.424811 7:+34391561 MsG0780037845.01.T01:CDS
TGTGGTCAAATAACTATTGC+TGG 0.429166 7:+34391890 MsG0780037845.01.T01:CDS
AGATCAAAATGGAAAATATA+GGG 0.431656 7:+34392347 MsG0780037845.01.T01:CDS
GAACTCTTGCCATCACATAT+CGG 0.435228 7:+34392519 MsG0780037845.01.T01:CDS
TGCTTCGACTGTAGCTATGA+TGG 0.437123 7:+34392130 MsG0780037845.01.T01:CDS
TGTAATGATGTCACAAAGAA+AGG 0.441665 7:+34392745 MsG0780037845.01.T01:CDS
CACTCATTGGTGAGTTTGAA+GGG 0.447101 7:+34392007 MsG0780037845.01.T01:CDS
TATAAACCTTAGACAATGTT+GGG 0.447233 7:+34392270 MsG0780037845.01.T01:CDS
GTTGGTGAATCTTTCGAAGA+TGG 0.452317 7:-34391435 None:intergenic
CAAAGTGAGGGAGTTTAGGT+TGG 0.456072 7:-34391453 None:intergenic
TCACTCATTGGTGAGTTTGA+AGG 0.459929 7:+34392006 MsG0780037845.01.T01:CDS
ATCAATTCCCAACATTCATC+AGG 0.467732 7:-34391263 None:intergenic
TCTATTTGGCTGAGAATACA+TGG 0.472085 7:+34392434 MsG0780037845.01.T01:CDS
AAGTTCAACACCTCCAGCTT+GGG 0.475609 7:-34392640 None:intergenic
GGTGATTGAGAGGAACTGTT+TGG 0.475707 7:-34391363 None:intergenic
CCTCTGACGAGGCTTGTTCT+CGG 0.476346 7:+34392103 MsG0780037845.01.T01:CDS
CACATACATCCACGATGAAA+AGG 0.481066 7:+34391183 None:intergenic
GTGAATAAAATGTGAAGAAA+CGG 0.481765 7:-34391987 None:intergenic
AACGATAATGACTTCAATGT+TGG 0.488491 7:-34391938 None:intergenic
TCGCAACCCATTAGCGGGAA+TGG 0.493014 7:-34391567 None:intergenic
AATATAGGGAGCAAGGGTGT+AGG 0.497229 7:+34392361 MsG0780037845.01.T01:CDS
AGCCAGAAAGATTAACCTTA+CGG 0.503769 7:-34391793 None:intergenic
AAATAGAGAGACTTTAATTG+AGG 0.504107 7:-34392418 None:intergenic
TGAGGGTATACACCAAAATC+CGG 0.505757 7:-34392400 None:intergenic
GAAAACTCGCAACCCATTAG+CGG 0.508767 7:-34391573 None:intergenic
ATAACAGTAGCTATTGTGAT+GGG 0.511098 7:+34391738 MsG0780037845.01.T01:CDS
TGCTCGCAACTGAGGGAGCA+TGG 0.511639 7:+34392790 MsG0780037845.01.T01:CDS
TGTTCAAGAGTGAATCTACT+TGG 0.514036 7:+34392601 MsG0780037845.01.T01:CDS
TTGGTGAATCTTTCGAAGAT+GGG 0.515050 7:-34391434 None:intergenic
TAGCTATTGTGATGGGGTAG+AGG 0.518373 7:+34391745 MsG0780037845.01.T01:CDS
CAAGTTCAACACCTCCAGCT+TGG 0.519812 7:-34392641 None:intergenic
GGTATTGATATCTGCAATGT+TGG 0.522396 7:-34391633 None:intergenic
AAATGCTCTACTCTATTGCA+AGG 0.525156 7:+34392071 MsG0780037845.01.T01:CDS
AATAGAGAGACTTTAATTGA+GGG 0.527352 7:-34392417 None:intergenic
AGCGGGAATGGTGCGTTGGA+TGG 0.527651 7:-34391555 None:intergenic
CAATTGTAAGCTTCTTGAAG+AGG 0.532590 7:+34391853 MsG0780037845.01.T01:CDS
TGCACTTCTCAAACTCCGTA+AGG 0.536927 7:+34391778 MsG0780037845.01.T01:CDS
CTCAACCTCAGCTACCCCTT+AGG 0.537611 7:+34391701 MsG0780037845.01.T01:CDS
AAAACTCGCAACCCATTAGC+GGG 0.539432 7:-34391572 None:intergenic
GAACTTCGTACTTCCCAAGC+TGG 0.540661 7:+34392627 MsG0780037845.01.T01:CDS
AATGGAAAATATAGGGAGCA+AGG 0.543928 7:+34392354 MsG0780037845.01.T01:CDS
AATAACAGTAGCTATTGTGA+TGG 0.545976 7:+34391737 MsG0780037845.01.T01:CDS
CTATAAACCTTAGACAATGT+TGG 0.546904 7:+34392269 MsG0780037845.01.T01:CDS
ATATAGGGAGCAAGGGTGTA+GGG 0.547334 7:+34392362 MsG0780037845.01.T01:CDS
AGAAAACTGCTCGCAACTGA+GGG 0.555805 7:+34392783 MsG0780037845.01.T01:CDS
AGGTTGAGTTCTTCGAGCAA+AGG 0.557959 7:-34391686 None:intergenic
TAGATTCACTCTTGAACAGT+GGG 0.559421 7:-34392596 None:intergenic
ATGGAAAATATAGGGAGCAA+GGG 0.581512 7:+34392355 MsG0780037845.01.T01:CDS
ATTCCTAACAAGTGCAAACA+AGG 0.582796 7:-34392308 None:intergenic
CATTAGCGGGAATGGTGCGT+TGG 0.584396 7:-34391559 None:intergenic
GTTGAACTTGTCATATACAA+AGG 0.585440 7:+34392654 MsG0780037845.01.T01:CDS
CATCCACGATGAAAAGGAGA+AGG 0.589125 7:+34391189 None:intergenic
AATGTCGTCGAGGTCAGTGA+TGG 0.592458 7:-34391480 None:intergenic
TGCAACCTAAGGGGTAGCTG+AGG 0.593424 7:-34391706 None:intergenic
GAGGGATAATCGAAGACGGT+TGG 0.595315 7:-34391384 None:intergenic
AAGAAAACTGCTCGCAACTG+AGG 0.595320 7:+34392782 MsG0780037845.01.T01:CDS
TGAATCTTTCGAAGATGGGA+CGG 0.608289 7:-34391430 None:intergenic
TGTTTGTTATCTAAGTGTCG+AGG 0.609639 7:+34392160 MsG0780037845.01.T01:CDS
GTAGATTCACTCTTGAACAG+TGG 0.614201 7:-34392597 None:intergenic
AGTGATGGATTTCAAAGTGA+GGG 0.618786 7:-34391465 None:intergenic
GTGATCTCAAAGTATTGCTG+TGG 0.628533 7:+34392697 MsG0780037845.01.T01:CDS
GCTGTCTGTTAAACAGTAGA+CGG 0.638994 7:-34391408 None:intergenic
TCTTGCCATCACATATCGGA+AGG 0.639103 7:+34392523 MsG0780037845.01.T01:CDS
GAAGACGGTTGGTGATTGAG+AGG 0.643305 7:-34391373 None:intergenic
CAGTGATGGATTTCAAAGTG+AGG 0.643811 7:-34391466 None:intergenic
CTGTTAAACAGTAGACGGTG+AGG 0.647180 7:-34391403 None:intergenic
TGCAATGAGGAACAGGTCGG+TGG 0.647649 7:-34391654 None:intergenic
AAGGAAAACATTCTGCAATG+AGG 0.648129 7:-34391667 None:intergenic
AATGCTCTACTCTATTGCAA+GGG 0.660163 7:+34392072 MsG0780037845.01.T01:CDS
TTCTGCAATGAGGAACAGGT+CGG 0.663012 7:-34391657 None:intergenic
AAATGCCTTCCGATATGTGA+TGG 0.665635 7:-34392528 None:intergenic
TAACAGTAGCTATTGTGATG+GGG 0.669303 7:+34391739 MsG0780037845.01.T01:CDS
TGTTAAACAGTAGACGGTGA+GGG 0.670737 7:-34391402 None:intergenic
AAAAGCGATTTATCGTTCAG+GGG 0.677853 7:-34391818 None:intergenic
CCGAGAACAAGCCTCGTCAG+AGG 0.679105 7:-34392103 None:intergenic
CTTCGTACTTCCCAAGCTGG+AGG 0.684702 7:+34392630 MsG0780037845.01.T01:CDS
CGGTGAGGGATAATCGAAGA+CGG 0.694349 7:-34391388 None:intergenic
GGGAAGATCTACCTCTGACG+AGG 0.694842 7:+34392092 MsG0780037845.01.T01:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AGATCAAAATGGAAAATATA+GGG + Chr7:34392347-34392366 MsG0780037845.01.T01:CDS 20.0%
!!! ATTTTTATTTTTGCAACCTA+AGG - Chr7:34391720-34391739 None:intergenic 20.0%
!!! TTTTTATTTTTGCAACCTAA+GGG - Chr7:34391719-34391738 None:intergenic 20.0%
! AAATAGAGAGACTTTAATTG+AGG - Chr7:34392421-34392440 None:intergenic 25.0%
! AATAGAGAGACTTTAATTGA+GGG - Chr7:34392420-34392439 None:intergenic 25.0%
! GAGATCAAAATGGAAAATAT+AGG + Chr7:34392346-34392365 MsG0780037845.01.T01:CDS 25.0%
! GTGAATAAAATGTGAAGAAA+CGG - Chr7:34391990-34392009 None:intergenic 25.0%
! TATAAACCTTAGACAATGTT+GGG + Chr7:34392270-34392289 MsG0780037845.01.T01:CDS 25.0%
! TCAATTAAAGTCTCTCTATT+TGG + Chr7:34392420-34392439 MsG0780037845.01.T01:CDS 25.0%
!! TTCACATTTTATTCACTCAT+TGG + Chr7:34391994-34392013 MsG0780037845.01.T01:CDS 25.0%
!!! TTTTATTTTTGCAACCTAAG+GGG - Chr7:34391718-34391737 None:intergenic 25.0%
AAAAAGCGATTTATCGTTCA+GGG - Chr7:34391822-34391841 None:intergenic 30.0%
AAATCAAGCAGCTTCAAATT+AGG - Chr7:34392499-34392518 None:intergenic 30.0%
AACGATAATGACTTCAATGT+TGG - Chr7:34391941-34391960 None:intergenic 30.0%
AATAACAGTAGCTATTGTGA+TGG + Chr7:34391737-34391756 MsG0780037845.01.T01:CDS 30.0%
AGATTTACCTGATGAATGTT+GGG + Chr7:34391256-34391275 MsG0780037845.01.T01:CDS 30.0%
ATAACAGTAGCTATTGTGAT+GGG + Chr7:34391738-34391757 MsG0780037845.01.T01:CDS 30.0%
CAGCTTCAAATTAGGAAAAA+TGG - Chr7:34392491-34392510 None:intergenic 30.0%
CTATAAACCTTAGACAATGT+TGG + Chr7:34392269-34392288 MsG0780037845.01.T01:CDS 30.0%
GTAGTGATCATTCAGAAAAT+TGG - Chr7:34392212-34392231 None:intergenic 30.0%
GTTGAACTTGTCATATACAA+AGG + Chr7:34392654-34392673 MsG0780037845.01.T01:CDS 30.0%
TACCAAATCATCACAACAAA+TGG + Chr7:34391226-34391245 MsG0780037845.01.T01:CDS 30.0%
TGTAATGATGTCACAAAGAA+AGG + Chr7:34392745-34392764 MsG0780037845.01.T01:CDS 30.0%
TTCACTTAGTGAGATCAAAA+TGG + Chr7:34392336-34392355 MsG0780037845.01.T01:CDS 30.0%
! GATGAGTTGTCTTTGTTTAT+TGG + Chr7:34392235-34392254 MsG0780037845.01.T01:CDS 30.0%
!! AACCATTTGTTGTGATGATT+TGG - Chr7:34391231-34391250 None:intergenic 30.0%
!! AAGGCATTTGTCAAGTTTTA+AGG + Chr7:34392542-34392561 MsG0780037845.01.T01:CDS 30.0%
!! ATTTTGATCTCACTAAGTGA+AGG - Chr7:34392337-34392356 None:intergenic 30.0%
!! TTGAAGAGGTTATCTTGTTT+TGG + Chr7:34391867-34391886 MsG0780037845.01.T01:CDS 30.0%
!!! AGAGATGTGAGTTTTTTCAA+TGG - Chr7:34391527-34391546 None:intergenic 30.0%
!!! TGGACTTTTGAAACTATTTG+TGG + Chr7:34392717-34392736 MsG0780037845.01.T01:CDS 30.0%
AAAAGCGATTTATCGTTCAG+GGG - Chr7:34391821-34391840 None:intergenic 35.0%
AAATGCTCTACTCTATTGCA+AGG + Chr7:34392071-34392090 MsG0780037845.01.T01:CDS 35.0%
AAGGAAAACATTCTGCAATG+AGG - Chr7:34391670-34391689 None:intergenic 35.0%
AATGCTCTACTCTATTGCAA+GGG + Chr7:34392072-34392091 MsG0780037845.01.T01:CDS 35.0%
AATGGAAAATATAGGGAGCA+AGG + Chr7:34392354-34392373 MsG0780037845.01.T01:CDS 35.0%
AGCCAGAAAGATTAACCTTA+CGG - Chr7:34391796-34391815 None:intergenic 35.0%
ATCAATTCCCAACATTCATC+AGG - Chr7:34391266-34391285 None:intergenic 35.0%
ATGGAAAATATAGGGAGCAA+GGG + Chr7:34392355-34392374 MsG0780037845.01.T01:CDS 35.0%
ATTCCTAACAAGTGCAAACA+AGG - Chr7:34392311-34392330 None:intergenic 35.0%
ATTTCAAAGTGAGGGAGTTT+AGG - Chr7:34391460-34391479 None:intergenic 35.0%
CAATTGTAAGCTTCTTGAAG+AGG + Chr7:34391853-34391872 MsG0780037845.01.T01:CDS 35.0%
CAGATTTACCTGATGAATGT+TGG + Chr7:34391255-34391274 MsG0780037845.01.T01:CDS 35.0%
GAAAAAGCGATTTATCGTTC+AGG - Chr7:34391823-34391842 None:intergenic 35.0%
TAACAGTAGCTATTGTGATG+GGG + Chr7:34391739-34391758 MsG0780037845.01.T01:CDS 35.0%
TAGATTCACTCTTGAACAGT+GGG - Chr7:34392599-34392618 None:intergenic 35.0%
TCTATTTGGCTGAGAATACA+TGG + Chr7:34392434-34392453 MsG0780037845.01.T01:CDS 35.0%
TGTGGTCAAATAACTATTGC+TGG + Chr7:34391890-34391909 MsG0780037845.01.T01:CDS 35.0%
TGTTCAAGAGTGAATCTACT+TGG + Chr7:34392601-34392620 MsG0780037845.01.T01:CDS 35.0%
TTGGTGAATCTTTCGAAGAT+GGG - Chr7:34391437-34391456 None:intergenic 35.0%
! CTAAATTGTTTTCGTCGTTG+AGG - Chr7:34391301-34391320 None:intergenic 35.0%
!! AGTGATGGATTTCAAAGTGA+GGG - Chr7:34391468-34391487 None:intergenic 35.0%
!! GGTATTGATATCTGCAATGT+TGG - Chr7:34391636-34391655 None:intergenic 35.0%
!! TAAGGAGGTGTTCTAATATC+AGG + Chr7:34392560-34392579 MsG0780037845.01.T01:CDS 35.0%
!! TGTTTGTTATCTAAGTGTCG+AGG + Chr7:34392160-34392179 MsG0780037845.01.T01:CDS 35.0%
!!! GCATTTGTCAAGTTTTAAGG+AGG + Chr7:34392545-34392564 MsG0780037845.01.T01:CDS 35.0%
AAATGCCTTCCGATATGTGA+TGG - Chr7:34392531-34392550 None:intergenic 40.0%
AACATTCTGCAATGAGGAAC+AGG - Chr7:34391664-34391683 None:intergenic 40.0%
AGGGAATTCTGATTCTTTGC+CGG + Chr7:34392381-34392400 MsG0780037845.01.T01:CDS 40.0%
CACTCATTGGTGAGTTTGAA+GGG + Chr7:34392007-34392026 MsG0780037845.01.T01:CDS 40.0%
CTCCGTAAGGTTAATCTTTC+TGG + Chr7:34391791-34391810 MsG0780037845.01.T01:CDS 40.0%
GAACTCTTGCCATCACATAT+CGG + Chr7:34392519-34392538 MsG0780037845.01.T01:CDS 40.0%
GCTGTCTGTTAAACAGTAGA+CGG - Chr7:34391411-34391430 None:intergenic 40.0%
GTAGATTCACTCTTGAACAG+TGG - Chr7:34392600-34392619 None:intergenic 40.0%
TCACTCATTGGTGAGTTTGA+AGG + Chr7:34392006-34392025 MsG0780037845.01.T01:CDS 40.0%
TGAATCTTTCGAAGATGGGA+CGG - Chr7:34391433-34391452 None:intergenic 40.0%
TGATCTCCCAACATTGTCTA+AGG - Chr7:34392279-34392298 None:intergenic 40.0%
TGTTAAACAGTAGACGGTGA+GGG - Chr7:34391405-34391424 None:intergenic 40.0%
! GTTGGTGAATCTTTCGAAGA+TGG - Chr7:34391438-34391457 None:intergenic 40.0%
! TCTGATTCTTTGCCGGATTT+TGG + Chr7:34392388-34392407 MsG0780037845.01.T01:CDS 40.0%
! TGAGGGTATACACCAAAATC+CGG - Chr7:34392403-34392422 None:intergenic 40.0%
! TTTTACAGAGAATGTCGTCG+AGG - Chr7:34391493-34391512 None:intergenic 40.0%
!! CAGTGATGGATTTCAAAGTG+AGG - Chr7:34391469-34391488 None:intergenic 40.0%
!! GTGATCTCAAAGTATTGCTG+TGG + Chr7:34392697-34392716 MsG0780037845.01.T01:CDS 40.0%
!!! GAGGTTATCTTGTTTTGGTG+TGG + Chr7:34391872-34391891 MsG0780037845.01.T01:CDS 40.0%
AAAACTCGCAACCCATTAGC+GGG - Chr7:34391575-34391594 None:intergenic 45.0%
AAGAAAACTGCTCGCAACTG+AGG + Chr7:34392782-34392801 MsG0780037845.01.T01:CDS 45.0%
AAGTTCAACACCTCCAGCTT+GGG - Chr7:34392643-34392662 None:intergenic 45.0%
AGAAAACTGCTCGCAACTGA+GGG + Chr7:34392783-34392802 MsG0780037845.01.T01:CDS 45.0%
AGGTTGAGTTCTTCGAGCAA+AGG - Chr7:34391689-34391708 None:intergenic 45.0%
CAAAGTGAGGGAGTTTAGGT+TGG - Chr7:34391456-34391475 None:intergenic 45.0%
CTGTTAAACAGTAGACGGTG+AGG - Chr7:34391406-34391425 None:intergenic 45.0%
GAAAACTCGCAACCCATTAG+CGG - Chr7:34391576-34391595 None:intergenic 45.0%
GGTGATTGAGAGGAACTGTT+TGG - Chr7:34391366-34391385 None:intergenic 45.0%
TCTTGCCATCACATATCGGA+AGG + Chr7:34392523-34392542 MsG0780037845.01.T01:CDS 45.0%
TGCACTTCTCAAACTCCGTA+AGG + Chr7:34391778-34391797 MsG0780037845.01.T01:CDS 45.0%
TGCTTCGACTGTAGCTATGA+TGG + Chr7:34392130-34392149 MsG0780037845.01.T01:CDS 45.0%
TTCTGCAATGAGGAACAGGT+CGG - Chr7:34391660-34391679 None:intergenic 45.0%
! AATATAGGGAGCAAGGGTGT+AGG + Chr7:34392361-34392380 MsG0780037845.01.T01:CDS 45.0%
! ATATAGGGAGCAAGGGTGTA+GGG + Chr7:34392362-34392381 MsG0780037845.01.T01:CDS 45.0%
! TAGCTATTGTGATGGGGTAG+AGG + Chr7:34391745-34391764 MsG0780037845.01.T01:CDS 45.0%
!! CAGCCTTGTTTGCACTTGTT+AGG + Chr7:34392305-34392324 MsG0780037845.01.T01:CDS 45.0%
AACGCACCATTCCCGCTAAT+GGG + Chr7:34391561-34391580 MsG0780037845.01.T01:CDS 50.0%
AATGTCGTCGAGGTCAGTGA+TGG - Chr7:34391483-34391502 None:intergenic 50.0%
CAAGTTCAACACCTCCAGCT+TGG - Chr7:34392644-34392663 None:intergenic 50.0%
CGGTGAGGGATAATCGAAGA+CGG - Chr7:34391391-34391410 None:intergenic 50.0%
GAACTTCGTACTTCCCAAGC+TGG + Chr7:34392627-34392646 MsG0780037845.01.T01:CDS 50.0%
GAGGGATAATCGAAGACGGT+TGG - Chr7:34391387-34391406 None:intergenic 50.0%
GTGTCGAGGTTTGCGTCATT+TGG + Chr7:34392174-34392193 MsG0780037845.01.T01:CDS 50.0%
!! GAAGACGGTTGGTGATTGAG+AGG - Chr7:34391376-34391395 None:intergenic 50.0%
CAACGCACCATTCCCGCTAA+TGG + Chr7:34391560-34391579 MsG0780037845.01.T01:CDS 55.0%
CATTAGCGGGAATGGTGCGT+TGG - Chr7:34391562-34391581 None:intergenic 55.0%
CTCAACCTCAGCTACCCCTT+AGG + Chr7:34391701-34391720 MsG0780037845.01.T01:CDS 55.0%
CTTCGTACTTCCCAAGCTGG+AGG + Chr7:34392630-34392649 MsG0780037845.01.T01:CDS 55.0%
GGGAAGATCTACCTCTGACG+AGG + Chr7:34392092-34392111 MsG0780037845.01.T01:CDS 55.0%
TCGCAACCCATTAGCGGGAA+TGG - Chr7:34391570-34391589 None:intergenic 55.0%
TGCAACCTAAGGGGTAGCTG+AGG - Chr7:34391709-34391728 None:intergenic 55.0%
TGCAATGAGGAACAGGTCGG+TGG - Chr7:34391657-34391676 None:intergenic 55.0%
! CCTCTGACGAGGCTTGTTCT+CGG + Chr7:34392103-34392122 MsG0780037845.01.T01:CDS 55.0%
AGCGGGAATGGTGCGTTGGA+TGG - Chr7:34391558-34391577 None:intergenic 60.0%
CCGAGAACAAGCCTCGTCAG+AGG - Chr7:34392106-34392125 None:intergenic 60.0%
TGCTCGCAACTGAGGGAGCA+TGG + Chr7:34392790-34392809 MsG0780037845.01.T01:CDS 60.0%
Chromosome Type Strat End Strand Name
Chr7 gene 34391197 34392828 34391197 ID=MsG0780037845.01;Name=MsG0780037845.01
Chr7 mRNA 34391197 34392828 34391197 ID=MsG0780037845.01.T01;Parent=MsG0780037845.01;Name=MsG0780037845.01.T01;_AED=0.49;_eAED=0.49;_QI=0|-1|0|1|-1|1|1|0|543
Chr7 exon 34391197 34392828 34391197 ID=MsG0780037845.01.T01:exon:784;Parent=MsG0780037845.01.T01
Chr7 CDS 34391197 34392828 34391197 ID=MsG0780037845.01.T01:cds;Parent=MsG0780037845.01.T01
Gene Sequence

>MsG0780037845.01.T01

ATGAAAAGGAGAAGGAAGAGAAGTTCTTCTACCAAATCATCACAACAAATGGTTTCTTCAGATTTACCTGATGAATGTTGGGAATTGATCTTCAGATTCATCCTCAACGACGAAAACAATTTAGATTATCACTCATTATATATCTTGAATTCTCTATCACTCGTCTCCAAACAGTTCCTCTCAATCACCAACCGTCTTCGATTATCCCTCACCGTCTACTGTTTAACAGACAGCCGTCCCATCTTCGAAAGATTCACCAACCTAAACTCCCTCACTTTGAAATCCATCACTGACCTCGACGACATTCTCTGTAAAATCTCTCGTTTTCCATTGAAAAAACTCACATCTCTCAACATCTCCATCCAACGCACCATTCCCGCTAATGGGTTGCGAGTTTTCTCTCAAAATATTACAACTTTGACATCTCTTACTTGTTCCAACATTGCAGATATCAATACCACCGACCTGTTCCTCATTGCAGAATGTTTTCCTTTGCTCGAAGAACTCAACCTCAGCTACCCCTTAGGTTGCAAAAATAAAAATAACAGTAGCTATTGTGATGGGGTAGAGGCTCTTTCACTTGCACTTCTCAAACTCCGTAAGGTTAATCTTTCTGGCTTTCCCCTGAACGATAAATCGCTTTTTCACTTGTTCAACAATTGTAAGCTTCTTGAAGAGGTTATCTTGTTTTGGTGTGGTCAAATAACTATTGCTGGAATTGCTTCTGCTATATGCGAGAGACCAACATTGAAGTCATTATCGTTTTGCAATCAAACACACTCTGAAAAGTCCGTTTCTTCACATTTTATTCACTCATTGGTGAGTTTGAAGGGTTTGACTTCTCTTTCTTTGACGTCTCTAAAAATCTCTGATGAAATGCTCTACTCTATTGCAAGGGAAGATCTACCTCTGACGAGGCTTGTTCTCGGATATTGCTTCGACTGTAGCTATGATGGATTCTTTTGTTTGTTATCTAAGTGTCGAGGTTTGCGTCATTTGGTTCTTCGACATGCCAATTTTCTGAATGATCACTACGTTGATGAGTTGTCTTTGTTTATTGGTGATTTAGTGTCTATAAACCTTAGACAATGTTGGGAGATCACATATTCAGCCTTGTTTGCACTTGTTAGGAATTGTCCTTCACTTAGTGAGATCAAAATGGAAAATATAGGGAGCAAGGGTGTAGGGAATTCTGATTCTTTGCCGGATTTTGGTGTATACCCTCAATTAAAGTCTCTCTATTTGGCTGAGAATACATGGTTAAGTGATGAACACATCATAATGTTCTCTTCCATTTTTCCTAATTTGAAGCTGCTTGATTTGAACTCTTGCCATCACATATCGGAAGGCATTTGTCAAGTTTTAAGGAGGTGTTCTAATATCAGGCATTTGAACTTAGCCCACTGTTCAAGAGTGAATCTACTTGGAGTGAACTTCGTACTTCCCAAGCTGGAGGTGTTGAACTTGTCATATACAAAGGTTGATGATGAAACACTCTATGTGATCTCAAAGTATTGCTGTGGACTTTTGAAACTATTTGTGGACAATTGTAATGATGTCACAAAGAAAGGAGTGAATCATGTGAAAGAAAACTGCTCGCAACTGAGGGAGCATGGATTCATTTATCACTAG

Protein sequence

>MsG0780037845.01.T01

MKRRRKRSSSTKSSQQMVSSDLPDECWELIFRFILNDENNLDYHSLYILNSLSLVSKQFLSITNRLRLSLTVYCLTDSRPIFERFTNLNSLTLKSITDLDDILCKISRFPLKKLTSLNISIQRTIPANGLRVFSQNITTLTSLTCSNIADINTTDLFLIAECFPLLEELNLSYPLGCKNKNNSSYCDGVEALSLALLKLRKVNLSGFPLNDKSLFHLFNNCKLLEEVILFWCGQITIAGIASAICERPTLKSLSFCNQTHSEKSVSSHFIHSLVSLKGLTSLSLTSLKISDEMLYSIAREDLPLTRLVLGYCFDCSYDGFFCLLSKCRGLRHLVLRHANFLNDHYVDELSLFIGDLVSINLRQCWEITYSALFALVRNCPSLSEIKMENIGSKGVGNSDSLPDFGVYPQLKSLYLAENTWLSDEHIIMFSSIFPNLKLLDLNSCHHISEGICQVLRRCSNIRHLNLAHCSRVNLLGVNFVLPKLEVLNLSYTKVDDETLYVISKYCCGLLKLFVDNCNDVTKKGVNHVKENCSQLREHGFIYH*