AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0015370


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0015370 MtrunA17_Chr1g0166191 98.273 521 9 0 1 521 1 521 0.0 1070
Msa0015370 MtrunA17_Chr1g0188051 85.437 515 69 3 11 521 2 514 0.0 932
Msa0015370 MtrunA17_Chr4g0063011 76.065 493 118 0 26 518 8 500 0.0 800
Msa0015370 MtrunA17_Chr4g0035081 66.469 507 161 2 6 512 5 502 0.0 706
Msa0015370 MtrunA17_Chr7g0276251 66.000 500 161 5 23 513 30 529 0.0 671
Msa0015370 MtrunA17_Chr2g0306781 84.759 374 57 0 145 518 32 405 0.0 660
Msa0015370 MtrunA17_Chr1g0209881 63.083 493 181 1 26 518 5 496 0.0 640
Msa0015370 MtrunA17_Chr5g0423521 60.000 495 197 1 24 518 3 496 0.0 618
Msa0015370 MtrunA17_Chr3g0136561 57.974 464 184 3 58 510 438 901 0.0 582
Msa0015370 MtrunA17_Chr6g0480561 62.125 433 163 1 83 514 38 470 0.0 576
Msa0015370 MtrunA17_Chr7g0250661 87.119 295 38 0 224 518 1 295 0.0 549
Msa0015370 MtrunA17_Chr2g0282281 52.653 490 219 5 19 504 23 503 1.24e-173 499
Msa0015370 MtrunA17_Chr2g0295781 50.355 423 205 4 93 512 31 451 2.50e-154 448
Msa0015370 MtrunA17_Chr2g0277841 51.951 410 194 3 105 513 45 452 3.31e-154 447
Msa0015370 MtrunA17_Chr7g0276241 67.931 290 86 2 224 511 1 285 3.71e-146 421
Msa0015370 MtrunA17_Chr1g0204301 44.608 408 225 1 104 510 77 484 4.68e-128 382
Msa0015370 MtrunA17_Chr6g0461631 66.275 255 86 0 259 513 3 257 1.20e-125 368
Msa0015370 MtrunA17_Chr3g0115041 41.970 467 267 3 45 510 20 483 6.11e-123 369
Msa0015370 MtrunA17_Chr3g0115021 41.970 467 267 3 45 510 20 483 6.52e-123 369
Msa0015370 MtrunA17_Chr6g0469631 44.169 403 223 2 109 510 81 482 1.68e-115 350
Msa0015370 MtrunA17_Chr4g0026871 67.401 227 73 1 287 512 1 227 1.79e-110 327
Msa0015370 MtrunA17_Chr4g0030601 40.964 415 237 3 100 509 22 433 5.09e-108 330
Msa0015370 MtrunA17_Chr4g0030591 38.839 448 247 5 79 509 5 442 3.44e-107 328
Msa0015370 MtrunA17_Chr1g0212951 37.471 435 247 4 97 509 20 451 7.52e-106 325
Msa0015370 MtrunA17_Chr2g0327721 39.121 455 240 9 80 511 6 446 1.00e-104 322
Msa0015370 MtrunA17_Chr4g0030581 40.662 423 235 4 100 509 22 441 1.28e-104 321
Msa0015370 MtrunA17_Chr4g0026791 63.687 179 64 1 287 464 1 179 1.44e-77 241
Msa0015370 MtrunA17_Chr4g0026721 67.296 159 52 0 354 512 1 159 3.19e-74 232
Msa0015370 MtrunA17_Chr7g0250651 59.429 175 70 1 26 199 19 193 2.12e-69 221
Msa0015370 MtrunA17_Chr6g0461621 49.787 235 108 4 40 271 2 229 1.52e-66 214
Msa0015370 MtrunA17_Chr4g0026861 53.333 180 84 0 83 262 36 215 4.33e-64 207
Msa0015370 MtrunA17_Chr4g0026801 44.715 123 68 0 83 205 36 158 7.75e-32 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0015370 AT1G04220.1 75.285 526 120 6 4 521 1 524 0.0 825
Msa0015370 AT2G26640.1 76.065 493 118 0 26 518 17 509 0.0 811
Msa0015370 AT5G43760.1 76.613 496 110 3 32 521 34 529 0.0 773
Msa0015370 AT1G19440.1 68.454 485 152 1 26 510 29 512 0.0 699
Msa0015370 AT2G16280.1 65.385 494 170 1 17 510 16 508 0.0 695
Msa0015370 AT1G01120.1 61.895 496 183 3 23 512 31 526 0.0 664
Msa0015370 AT1G68530.1 60.484 496 195 1 23 518 3 497 0.0 642
Msa0015370 AT4G34510.1 63.312 477 168 3 37 512 15 485 0.0 639
Msa0015370 AT1G25450.1 60.243 493 195 1 26 518 1 492 0.0 631
Msa0015370 AT2G26250.1 55.814 516 197 5 23 510 36 548 0.0 594
Msa0015370 AT2G46720.1 60.241 415 161 2 101 512 52 465 0.0 551
Msa0015370 AT4G34250.1 56.198 484 205 3 35 512 5 487 0.0 551
Msa0015370 AT4G34520.1 55.828 489 198 5 38 512 6 490 0.0 543
Msa0015370 AT2G15090.1 56.170 470 196 3 52 512 11 479 0.0 540
Msa0015370 AT3G10280.1 59.036 415 159 3 101 512 52 458 0.0 532
Msa0015370 AT1G71160.1 48.485 429 218 3 83 510 20 446 1.23e-150 439
Msa0015370 AT1G68530.2 56.196 347 152 0 23 369 3 349 9.32e-144 418
Msa0015370 AT3G52160.1 44.842 475 215 4 27 501 22 449 7.40e-143 419
Msa0015370 AT5G49070.1 47.674 430 217 4 93 518 36 461 8.40e-142 417
Msa0015370 AT3G52160.2 50.829 362 147 2 140 501 6 336 4.29e-130 382
Msa0015370 AT2G28630.2 40.431 418 234 4 107 509 29 446 2.69e-108 331
Msa0015370 AT2G28630.1 40.431 418 234 4 107 509 29 446 2.69e-108 331
Msa0015370 AT1G07720.1 40.995 422 231 4 105 509 27 447 2.43e-107 329
Msa0015370 AT1G07720.2 40.995 422 231 4 105 509 70 490 4.06e-107 330
Msa0015370 AT5G04530.1 38.679 424 249 5 94 509 17 437 1.01e-104 322
Msa0015370 AT5G49070.2 44.286 280 153 2 93 371 36 313 1.60e-79 251

Find 110 sgRNAs with CRISPR-Local

Find 229 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGCTAAGGATATTGGGATTT+TGG 0.160476 1_1:+24801951 Msa0015370:CDS
TAATGGATGAAAGTTGTTTA+TGG 0.213188 1_1:+24804350 Msa0015370:three_prime_UTR
AAGCAACTTTGAAGATTAAT+TGG 0.219548 1_1:-24804524 None:intergenic
TTATGAAAGGGAAAAGTTTA+AGG 0.220391 1_1:-24801217 None:intergenic
CAAGGATTCTTCTCCTTTGC+AGG 0.220809 1_1:-24804217 None:intergenic
TGGTATTGTTGTTATTTCTT+AGG 0.231720 1_1:+24804370 Msa0015370:three_prime_UTR
CCTAAAGTGTCAAAAGTTAT+TGG 0.251553 1_1:+24804274 Msa0015370:CDS
TGCTGGTGGAAGAGCTGTTT+TGG 0.263824 1_1:+24803973 Msa0015370:CDS
TAATTATAGGCTTATTATAT+TGG 0.271077 1_1:-24801311 None:intergenic
CCCATTCTAAAGAGACAATT+TGG 0.276277 1_1:-24803605 None:intergenic
TACTTGAGAGGTCAGGTTTA+GGG 0.283882 1_1:+24801800 Msa0015370:CDS
ACAAAATGAGTACTAATTAT+AGG 0.289822 1_1:-24801324 None:intergenic
CTATTCAGTGTCATCCTTGA+TGG 0.309908 1_1:-24804040 None:intergenic
ATACTTGAGAGGTCAGGTTT+AGG 0.311096 1_1:+24801799 Msa0015370:CDS
TGGCAAATTGCATTTGGTTC+TGG 0.315520 1_1:+24804148 Msa0015370:CDS
TTCGGACCGTGTGGACTAAT+TGG 0.325598 1_1:-24803682 None:intergenic
TAAGGTAAAGAAGTGGAGTT+TGG 0.326113 1_1:-24801199 None:intergenic
GAGTTATAACCTTGGTGGTA+TGG 0.351468 1_1:+24802056 Msa0015370:CDS
ATAACACTAAACTGGTATTT+CGG 0.355736 1_1:+24803560 Msa0015370:CDS
AAAACAAACATCACAACATT+AGG 0.368559 1_1:+24803821 Msa0015370:CDS
AAAATCTTGATTTAAGTGAT+TGG 0.369920 1_1:+24804008 Msa0015370:CDS
GAGGCGGTCGCGGGGCTTGT+TGG 0.372909 1_1:-24803648 None:intergenic
GGTGGGACCCTCATTATTGC+TGG 0.378006 1_1:-24801841 None:intergenic
TGATTTAAGTGATTGGCATA+TGG 0.379553 1_1:+24804015 Msa0015370:CDS
ACTACTAAGGCATATGAGTT+TGG 0.381631 1_1:-24803524 None:intergenic
GCTTCAGCCATACAAGGATT+AGG 0.382875 1_1:-24801862 None:intergenic
GCCAAATTGTCTCTTTAGAA+TGG 0.383170 1_1:+24803604 Msa0015370:CDS
AGAACTTGGCAAATTGCATT+TGG 0.384648 1_1:+24804142 Msa0015370:CDS
TTGGACGAGACATGAAATAA+AGG 0.385307 1_1:-24801645 None:intergenic
GGTGTGAAGGCTAAGGATAT+TGG 0.386847 1_1:+24801943 Msa0015370:CDS
CGTCTGCACCTTTGTGCGTT+CGG 0.388768 1_1:-24803700 None:intergenic
TAGTTCTTTGTGGTATGAAT+TGG 0.397511 1_1:+24804081 Msa0015370:CDS
CTTCTCCGGCAACAGCCATT+AGG 0.398163 1_1:-24803793 None:intergenic
GACACTTTAGGCACATGAAC+AGG 0.403570 1_1:-24804262 None:intergenic
GTGTGAAGGCTAAGGATATT+GGG 0.408098 1_1:+24801944 Msa0015370:CDS
AATTTAAAATCAGGAATGTA+TGG 0.409132 1_1:-24803926 None:intergenic
AGGATGACACTGAATAGATT+TGG 0.410289 1_1:+24804046 Msa0015370:CDS
TGTGTGTGAGGATTATATTT+TGG 0.413437 1_1:-24801240 None:intergenic
GATGAGGTTCTTCAGAAAAC+TGG 0.416638 1_1:+24801922 Msa0015370:CDS
AAAGACCTAATGGCTGTTGC+CGG 0.418979 1_1:+24803788 Msa0015370:CDS
GGTGGTATGGGTTGTAGTGC+TGG 0.422422 1_1:+24802069 Msa0015370:CDS
TCAAAAGCTAATTTAAAATC+AGG 0.424969 1_1:-24803935 None:intergenic
TGGAGAACATAACACTAAAC+TGG 0.426255 1_1:+24803552 Msa0015370:CDS
TTAAGTGTAATAGTGCTGTT+TGG 0.431690 1_1:+24804173 Msa0015370:CDS
GAAGCTGAAGAGGTTATGTT+TGG 0.442456 1_1:+24801892 Msa0015370:CDS
ATCACTCTCAAAAGACCTAA+TGG 0.453901 1_1:+24803778 Msa0015370:CDS
CCAAATTGTCTCTTTAGAAT+GGG 0.459229 1_1:+24803605 Msa0015370:CDS
TTTATAATGATTCACAATCA+TGG 0.459935 1_1:-24802016 None:intergenic
TTCCTTGCTTCAGCCATACA+AGG 0.461441 1_1:-24801868 None:intergenic
GTGAATCATTATAAATTGAG+AGG 0.462455 1_1:+24802024 Msa0015370:CDS
CTGCAAAGGAGAAGAATCCT+TGG 0.462852 1_1:+24804218 Msa0015370:CDS
AGTTATAACCTTGGTGGTAT+GGG 0.464051 1_1:+24802057 Msa0015370:CDS
TACTACCTGTAGGAGCTGTT+TGG 0.468027 1_1:-24802112 None:intergenic
GGTCCCACCTAATCCTTGTA+TGG 0.472798 1_1:+24801855 Msa0015370:CDS
TCAACCAAGTATATGCCTCT+TGG 0.475583 1_1:-24801664 None:intergenic
TGGACGAGACATGAAATAAA+GGG 0.477261 1_1:-24801644 None:intergenic
AGAAGTGGAGTTTGGAAAAG+AGG 0.478392 1_1:-24801191 None:intergenic
ACACTTCAAGTAGTTCTTTG+TGG 0.479476 1_1:+24804071 Msa0015370:CDS
GTTCTCCATGCTCACTACTA+AGG 0.483955 1_1:-24803537 None:intergenic
GGTCGCGGGGCTTGTTGGAG+AGG 0.485143 1_1:-24803643 None:intergenic
AAAAGAGGAAAGAAAGCAAA+GGG 0.495861 1_1:-24801176 None:intergenic
AAGAAGATACTTGAGAGGTC+AGG 0.507068 1_1:+24801793 Msa0015370:CDS
ATCTTGAGTTATAACCTTGG+TGG 0.510802 1_1:+24802051 Msa0015370:CDS
AATAAGAGCTGTTCCGACAT+AGG 0.515411 1_1:-24803857 None:intergenic
TGGCTTATACTGAAGCTAAA+GGG 0.515795 1_1:+24804101 Msa0015370:CDS
TAGCATTAGAAATCAAATAG+TGG 0.520936 1_1:-24801474 None:intergenic
ATTTGCCACCAGCAATAATG+AGG 0.520942 1_1:+24801833 Msa0015370:CDS
TTGGCTTATACTGAAGCTAA+AGG 0.523513 1_1:+24804100 Msa0015370:CDS
CCTTGCCAAACAGCTCCTAC+AGG 0.533062 1_1:+24802107 Msa0015370:CDS
GAAAACTGGTGTGAAGGCTA+AGG 0.535066 1_1:+24801936 Msa0015370:CDS
AAAAGTTTAAGGTAAAGAAG+TGG 0.543392 1_1:-24801206 None:intergenic
GAAAAGAGGAAAGAAAGCAA+AGG 0.548668 1_1:-24801177 None:intergenic
AAACTAAAATATGTGAAACT+TGG 0.549788 1_1:+24801448 Msa0015370:CDS
TCCGACATAGGTAGGACTAA+TGG 0.554529 1_1:-24803845 None:intergenic
TGAATCATTATAAATTGAGA+GGG 0.566439 1_1:+24802025 Msa0015370:CDS
AGCAAGGAAAGAAGCTGAAG+AGG 0.567920 1_1:+24801882 Msa0015370:CDS
ATATGCCTTAGTAGTGAGCA+TGG 0.583220 1_1:+24803532 Msa0015370:CDS
TATGTTTGGTGCTATTGATG+AGG 0.584923 1_1:+24801906 Msa0015370:CDS
GAAGACTATTAATCCTGCAA+AGG 0.592395 1_1:+24804204 Msa0015370:CDS
ATGGCAGAAAGAGAAGGTGT+TGG 0.592954 1_1:-24801997 None:intergenic
TCATGAATCTCATCAATCCA+AGG 0.593092 1_1:-24804235 None:intergenic
ACCATTAGTCCTACCTATGT+CGG 0.593399 1_1:+24803844 Msa0015370:CDS
ATCCTTGTATGGCTGAAGCA+AGG 0.593578 1_1:+24801866 Msa0015370:CDS
TCTTCAGAAAACTGGTGTGA+AGG 0.595889 1_1:+24801930 Msa0015370:CDS
TTCAAAAGAAGATACTTGAG+AGG 0.596401 1_1:+24801788 Msa0015370:CDS
CACACAGTTATTGTCCATGT+TGG 0.599187 1_1:+24804457 Msa0015370:three_prime_UTR
TCGTCCAAGAGGCATATACT+TGG 0.600756 1_1:+24801660 Msa0015370:CDS
AGAGCTGTTCCGACATAGGT+AGG 0.601625 1_1:-24803853 None:intergenic
AATTGTCTCTTTAGAATGGG+AGG 0.604004 1_1:+24803608 Msa0015370:CDS
TATTTCATGTCTCGTCCAAG+AGG 0.609525 1_1:+24801649 Msa0015370:CDS
AATATCTTGAGTTATAACCT+TGG 0.611816 1_1:+24802048 Msa0015370:CDS
CAAAGAGAGGTATTAAAACA+AGG 0.612789 1_1:-24801501 None:intergenic
GCTTATATGTTCAAGTCTAG+TGG 0.614815 1_1:+24801609 Msa0015370:CDS
ACAATCATGGCAGAAAGAGA+AGG 0.617963 1_1:-24802003 None:intergenic
CTTTGTGCGTTCGGACCGTG+TGG 0.618427 1_1:-24803691 None:intergenic
TCAGCCATACAAGGATTAGG+TGG 0.618571 1_1:-24801859 None:intergenic
TTTGATCGGAGGCGGTCGCG+GGG 0.627458 1_1:-24803656 None:intergenic
TTCTTGAAAGACGCAGCCGT+AGG 0.629235 1_1:-24803729 None:intergenic
CACACGGTCCGAACGCACAA+AGG 0.629381 1_1:+24803692 Msa0015370:CDS
GGGACCCTCATTATTGCTGG+TGG 0.630072 1_1:-24801838 None:intergenic
ATTGGCATATGGAACCATCA+AGG 0.630727 1_1:+24804026 Msa0015370:CDS
CCTGTAGGAGCTGTTTGGCA+AGG 0.633073 1_1:-24802107 None:intergenic
CAGCCATACAAGGATTAGGT+GGG 0.655239 1_1:-24801858 None:intergenic
CTTATACTGAAGCTAAAGGG+AGG 0.665669 1_1:+24804104 Msa0015370:CDS
GGTGCAGACGACAAATCCTA+CGG 0.666672 1_1:+24803713 Msa0015370:CDS
TTTGCCACCAGCAATAATGA+GGG 0.678345 1_1:+24801834 Msa0015370:CDS
AAAATACCAATTAGTCCACA+CGG 0.687656 1_1:+24803676 Msa0015370:CDS
ACTGAAGCTACTCCAAAGAG+AGG 0.692988 1_1:-24801514 None:intergenic
CACTACAACCCATACCACCA+AGG 0.705198 1_1:-24802065 None:intergenic
GAAGACGACACAAAGCAAGT+CGG 0.719234 1_1:+24803752 Msa0015370:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATTATATATAAATAAAA+TGG - chr1_1:24803351-24803370 None:intergenic 0.0%
!! TGATAAAATGTAAAAATAAA+GGG - chr1_1:24801288-24801307 None:intergenic 10.0%
!! TTGATAAAATGTAAAAATAA+AGG - chr1_1:24801289-24801308 None:intergenic 10.0%
!!! CATAATATTTTATAAACAAA+AGG - chr1_1:24803213-24803232 None:intergenic 10.0%
!!! CTTTTGTTTATAAAATATTA+TGG + chr1_1:24803211-24803230 Msa0015370:intron 10.0%
!!! ATGTTTTTTTATGTATATTA+AGG + chr1_1:24804318-24804337 Msa0015370:three_prime_UTR 10.0%
!!! ATTATATTTTGGTTATGAAA+GGG - chr1_1:24801232-24801251 None:intergenic 15.0%
!! TAATTATAGGCTTATTATAT+TGG - chr1_1:24801314-24801333 None:intergenic 15.0%
!!! ATTTGAGATTTTCATATAAT+TGG - chr1_1:24801573-24801592 None:intergenic 15.0%
!!! TAATATATAGTTTTGGATTA+TGG - chr1_1:24802157-24802176 None:intergenic 15.0%
!!! GATGAAATAATATATAGTTT+TGG - chr1_1:24802164-24802183 None:intergenic 15.0%
!!! TTATAAAATATTATGGGTTA+TGG + chr1_1:24803218-24803237 Msa0015370:intron 15.0%
!! TATATATACATTGTTTATCA+TGG - chr1_1:24803497-24803516 None:intergenic 15.0%
!! ATGATAAACAATGTATATAT+AGG + chr1_1:24803496-24803515 Msa0015370:intron 15.0%
!!! TTTTTTTATGTATATTAAGG+AGG + chr1_1:24804321-24804340 Msa0015370:three_prime_UTR 15.0%
!!! TTTTTTATGTATATTAAGGA+GGG + chr1_1:24804322-24804341 Msa0015370:three_prime_UTR 15.0%
!!! GATTATATTTTGGTTATGAA+AGG - chr1_1:24801233-24801252 None:intergenic 20.0%
!! ACAAAATGAGTACTAATTAT+AGG - chr1_1:24801327-24801346 None:intergenic 20.0%
!! TTCACGGATATTAAAAAATT+GGG - chr1_1:24801430-24801449 None:intergenic 20.0%
!! TTTCACGGATATTAAAAAAT+TGG - chr1_1:24801431-24801450 None:intergenic 20.0%
!!! TTTCACATATTTTAGTTTCA+CGG - chr1_1:24801446-24801465 None:intergenic 20.0%
!! AAACTAAAATATGTGAAACT+TGG + chr1_1:24801448-24801467 Msa0015370:CDS 20.0%
!! TTTATAATGATTCACAATCA+TGG - chr1_1:24802019-24802038 None:intergenic 20.0%
!! TGAATCATTATAAATTGAGA+GGG + chr1_1:24802025-24802044 Msa0015370:CDS 20.0%
!! AACCTAGTTATTATTATGTA+GGG - chr1_1:24802388-24802407 None:intergenic 20.0%
!! AAACCTAGTTATTATTATGT+AGG - chr1_1:24802389-24802408 None:intergenic 20.0%
!! TATTATAAACCAAGAAGAAA+TGG - chr1_1:24802481-24802500 None:intergenic 20.0%
!! AATAAAAGATCCTAAAAATG+GGG - chr1_1:24802721-24802740 None:intergenic 20.0%
!! CAATAAAAGATCCTAAAAAT+GGG - chr1_1:24802722-24802741 None:intergenic 20.0%
!! CTTAAAAGTTAAAAGAGATT+GGG + chr1_1:24802749-24802768 Msa0015370:intron 20.0%
!! GTATAATCTTTATCAAATGA+TGG + chr1_1:24803006-24803025 Msa0015370:intron 20.0%
!!! TTTAAAATCTAAACTTGTCA+TGG - chr1_1:24803151-24803170 None:intergenic 20.0%
!! AAAGGAAAAAATAAACTAGT+TGG - chr1_1:24803195-24803214 None:intergenic 20.0%
!!! AATTTAAAATCAGGAATGTA+TGG - chr1_1:24803929-24803948 None:intergenic 20.0%
!!! TCAAAAGCTAATTTAAAATC+AGG - chr1_1:24803938-24803957 None:intergenic 20.0%
!! AAAATCTTGATTTAAGTGAT+TGG + chr1_1:24804008-24804027 Msa0015370:CDS 20.0%
!! ACCAAAAACAAAATACAAAT+TGG - chr1_1:24804428-24804447 None:intergenic 20.0%
!! AAAAGTTTAAGGTAAAGAAG+TGG - chr1_1:24801209-24801228 None:intergenic 25.0%
! TTATGAAAGGGAAAAGTTTA+AGG - chr1_1:24801220-24801239 None:intergenic 25.0%
! TCACGGATATTAAAAAATTG+GGG - chr1_1:24801429-24801448 None:intergenic 25.0%
! TAGCATTAGAAATCAAATAG+TGG - chr1_1:24801477-24801496 None:intergenic 25.0%
! GTGAATCATTATAAATTGAG+AGG + chr1_1:24802024-24802043 Msa0015370:CDS 25.0%
! AATATCTTGAGTTATAACCT+TGG + chr1_1:24802048-24802067 Msa0015370:CDS 25.0%
! AGATATAATATACTACCTGT+AGG - chr1_1:24802125-24802144 None:intergenic 25.0%
! ACCTAGTTATTATTATGTAG+GGG - chr1_1:24802387-24802406 None:intergenic 25.0%
! ACTTTAGTAAATGTGTTCAA+AGG + chr1_1:24802614-24802633 Msa0015370:intron 25.0%
! AAATAAATTATATCCACGAG+TGG - chr1_1:24802671-24802690 None:intergenic 25.0%
! GCAATAAAAGATCCTAAAAA+TGG - chr1_1:24802723-24802742 None:intergenic 25.0%
! GCTTAAAAGTTAAAAGAGAT+TGG + chr1_1:24802748-24802767 Msa0015370:intron 25.0%
!!! TTTAAAACATTGATTTGCAC+AGG + chr1_1:24803165-24803184 Msa0015370:intron 25.0%
!! TTATTGTGGAATATGGATTA+TGG - chr1_1:24803387-24803406 None:intergenic 25.0%
! ATAACACTAAACTGGTATTT+CGG + chr1_1:24803560-24803579 Msa0015370:CDS 25.0%
! AAAACAAACATCACAACATT+AGG + chr1_1:24803821-24803840 Msa0015370:CDS 25.0%
! TTAAAAAAGGTGATAGAACT+TGG + chr1_1:24804128-24804147 Msa0015370:CDS 25.0%
!! TAATGGATGAAAGTTGTTTA+TGG + chr1_1:24804350-24804369 Msa0015370:three_prime_UTR 25.0%
!!! TGGTATTGTTGTTATTTCTT+AGG + chr1_1:24804370-24804389 Msa0015370:three_prime_UTR 25.0%
!!! GCCAATTTGTATTTTGTTTT+TGG + chr1_1:24804424-24804443 Msa0015370:three_prime_UTR 25.0%
AAAAGAGGAAAGAAAGCAAA+GGG - chr1_1:24801179-24801198 None:intergenic 30.0%
! TGTGTGTGAGGATTATATTT+TGG - chr1_1:24801243-24801262 None:intergenic 30.0%
!!! TTATTTTGCTGTTCCATGAA+GGG - chr1_1:24801355-24801374 None:intergenic 30.0%
!!! ATTATTTTGCTGTTCCATGA+AGG - chr1_1:24801356-24801375 None:intergenic 30.0%
!! CAAAGAGAGGTATTAAAACA+AGG - chr1_1:24801504-24801523 None:intergenic 30.0%
!!! CTTGTTTTAATACCTCTCTT+TGG + chr1_1:24801502-24801521 Msa0015370:CDS 30.0%
TTCAAAAGAAGATACTTGAG+AGG + chr1_1:24801788-24801807 Msa0015370:CDS 30.0%
AAATGTGATTGGATTGAACT+AGG - chr1_1:24802206-24802225 None:intergenic 30.0%
ATCTGATCAACAAATGTGAT+TGG - chr1_1:24802217-24802236 None:intergenic 30.0%
! ATTTGTTGATCAGATGTGAT+TGG + chr1_1:24802222-24802241 Msa0015370:intron 30.0%
TCCCCTACATAATAATAACT+AGG + chr1_1:24802383-24802402 Msa0015370:intron 30.0%
AAATCAAGTCCATTTCTTCT+TGG + chr1_1:24802469-24802488 Msa0015370:intron 30.0%
! GGCTTCAAAATAATTAGTCT+TGG - chr1_1:24802509-24802528 None:intergenic 30.0%
CTACGTGCATGTTAATATTT+AGG + chr1_1:24802639-24802658 Msa0015370:intron 30.0%
!! AACATTGGAGGGTATTAATT+AGG - chr1_1:24802841-24802860 None:intergenic 30.0%
CAACATGTCAACATAAACAA+GGG - chr1_1:24802894-24802913 None:intergenic 30.0%
ACAACATGTCAACATAAACA+AGG - chr1_1:24802895-24802914 None:intergenic 30.0%
TTTCATCAAACGGCTATAAT+TGG - chr1_1:24802946-24802965 None:intergenic 30.0%
!! GGATTTGTTGACAAGATTTA+AGG - chr1_1:24803330-24803349 None:intergenic 30.0%
! CCAATTGTTATTGTGGAATA+TGG - chr1_1:24803394-24803413 None:intergenic 30.0%
CCATATTCCACAATAACAAT+TGG + chr1_1:24803391-24803410 Msa0015370:intron 30.0%
! TTGTGATCCAATTGTTATTG+TGG - chr1_1:24803401-24803420 None:intergenic 30.0%
! CAATTGGATCACAAGTTTTT+CGG + chr1_1:24803407-24803426 Msa0015370:intron 30.0%
!! CCAAATTGTCTCTTTAGAAT+GGG + chr1_1:24803605-24803624 Msa0015370:CDS 30.0%
!!! GGACTAATTGGTATTTTGAT+CGG - chr1_1:24803673-24803692 None:intergenic 30.0%
AAAATACCAATTAGTCCACA+CGG + chr1_1:24803676-24803695 Msa0015370:CDS 30.0%
TGATTTAAGTGATTGGCATA+TGG + chr1_1:24804015-24804034 Msa0015370:CDS 30.0%
TAGTTCTTTGTGGTATGAAT+TGG + chr1_1:24804081-24804100 Msa0015370:CDS 30.0%
! TTAAGTGTAATAGTGCTGTT+TGG + chr1_1:24804173-24804192 Msa0015370:CDS 30.0%
! CCAATAACTTTTGACACTTT+AGG - chr1_1:24804277-24804296 None:intergenic 30.0%
! CCTAAAGTGTCAAAAGTTAT+TGG + chr1_1:24804274-24804293 Msa0015370:CDS 30.0%
!!! TATTAAGGAGGGTGTTTTAA+TGG + chr1_1:24804333-24804352 Msa0015370:three_prime_UTR 30.0%
ACAAAAACAAATGACCAACA+TGG - chr1_1:24804474-24804493 None:intergenic 30.0%
GAAAAGAGGAAAGAAAGCAA+AGG - chr1_1:24801180-24801199 None:intergenic 35.0%
TAAGGTAAAGAAGTGGAGTT+TGG - chr1_1:24801202-24801221 None:intergenic 35.0%
GCTTATATGTTCAAGTCTAG+TGG + chr1_1:24801609-24801628 Msa0015370:CDS 35.0%
TGGACGAGACATGAAATAAA+GGG - chr1_1:24801647-24801666 None:intergenic 35.0%
TTGGACGAGACATGAAATAA+AGG - chr1_1:24801648-24801667 None:intergenic 35.0%
!!! GTGACTTGCAATTGTTTTTG+TGG - chr1_1:24801706-24801725 None:intergenic 35.0%
!! TATGTTTGGTGCTATTGATG+AGG + chr1_1:24801906-24801925 Msa0015370:CDS 35.0%
ATCTTGAGTTATAACCTTGG+TGG + chr1_1:24802051-24802070 Msa0015370:CDS 35.0%
! AGTTATAACCTTGGTGGTAT+GGG + chr1_1:24802057-24802076 Msa0015370:CDS 35.0%
TCAAGTCAAAGAATCTTCTG+CGG - chr1_1:24802362-24802381 None:intergenic 35.0%
GATTTCTTGAAGTCTGTAAC+AGG - chr1_1:24802454-24802473 None:intergenic 35.0%
GATCCTTATTATTTGCAGAG+TGG - chr1_1:24802533-24802552 None:intergenic 35.0%
ATGTCTCCATGATAGAGTTA+GGG - chr1_1:24802555-24802574 None:intergenic 35.0%
TATGTCTCCATGATAGAGTT+AGG - chr1_1:24802556-24802575 None:intergenic 35.0%
! ATTTAGGTATTTTCCACTCG+TGG + chr1_1:24802655-24802674 Msa0015370:intron 35.0%
TACAACCTGTACGTTTGAAT+TGG - chr1_1:24802784-24802803 None:intergenic 35.0%
TTCAAACGTACAGGTTGTAA+AGG + chr1_1:24802785-24802804 Msa0015370:intron 35.0%
!! TTGGAGGGTATTAATTAGGT+TGG - chr1_1:24802837-24802856 None:intergenic 35.0%
ATCCAAGTTTCCCATAGTTA+TGG + chr1_1:24802867-24802886 Msa0015370:intron 35.0%
AAACAAGGGTCCATAACTAT+GGG - chr1_1:24802880-24802899 None:intergenic 35.0%
TAAACAAGGGTCCATAACTA+TGG - chr1_1:24802881-24802900 None:intergenic 35.0%
TTATGGTTATCCAACTAGCT+AGG + chr1_1:24803235-24803254 Msa0015370:intron 35.0%
TATGGTTATCCAACTAGCTA+GGG + chr1_1:24803236-24803255 Msa0015370:intron 35.0%
ACTACTAAGGCATATGAGTT+TGG - chr1_1:24803527-24803546 None:intergenic 35.0%
TGGAGAACATAACACTAAAC+TGG + chr1_1:24803552-24803571 Msa0015370:CDS 35.0%
! GCCAAATTGTCTCTTTAGAA+TGG + chr1_1:24803604-24803623 Msa0015370:CDS 35.0%
! CCCATTCTAAAGAGACAATT+TGG - chr1_1:24803608-24803627 None:intergenic 35.0%
!! AATTGTCTCTTTAGAATGGG+AGG + chr1_1:24803608-24803627 Msa0015370:CDS 35.0%
!!! CTAATTGGTATTTTGATCGG+AGG - chr1_1:24803670-24803689 None:intergenic 35.0%
ATCACTCTCAAAAGACCTAA+TGG + chr1_1:24803778-24803797 Msa0015370:CDS 35.0%
!!! TCGGAACAGCTCTTATTTTT+CGG + chr1_1:24803863-24803882 Msa0015370:CDS 35.0%
! GAGCATTTTTGTATTCATGC+TGG + chr1_1:24803956-24803975 Msa0015370:CDS 35.0%
! CATTTTTGTATTCATGCTGG+TGG + chr1_1:24803959-24803978 Msa0015370:CDS 35.0%
AGGATGACACTGAATAGATT+TGG + chr1_1:24804046-24804065 Msa0015370:CDS 35.0%
ACACTTCAAGTAGTTCTTTG+TGG + chr1_1:24804071-24804090 Msa0015370:CDS 35.0%
TTGGCTTATACTGAAGCTAA+AGG + chr1_1:24804100-24804119 Msa0015370:CDS 35.0%
TGGCTTATACTGAAGCTAAA+GGG + chr1_1:24804101-24804120 Msa0015370:CDS 35.0%
GCTAAAGGGAGGATTAAAAA+AGG + chr1_1:24804115-24804134 Msa0015370:CDS 35.0%
AGAACTTGGCAAATTGCATT+TGG + chr1_1:24804142-24804161 Msa0015370:CDS 35.0%
GAAGACTATTAATCCTGCAA+AGG + chr1_1:24804204-24804223 Msa0015370:CDS 35.0%
TCATGAATCTCATCAATCCA+AGG - chr1_1:24804238-24804257 None:intergenic 35.0%
AGAAGTGGAGTTTGGAAAAG+AGG - chr1_1:24801194-24801213 None:intergenic 40.0%
! TTAAAGAGTGTGTGTGTGTG+AGG - chr1_1:24801255-24801274 None:intergenic 40.0%
TATTTCATGTCTCGTCCAAG+AGG + chr1_1:24801649-24801668 Msa0015370:CDS 40.0%
TCAACCAAGTATATGCCTCT+TGG - chr1_1:24801667-24801686 None:intergenic 40.0%
AAGAAGATACTTGAGAGGTC+AGG + chr1_1:24801793-24801812 Msa0015370:CDS 40.0%
ATACTTGAGAGGTCAGGTTT+AGG + chr1_1:24801799-24801818 Msa0015370:CDS 40.0%
TACTTGAGAGGTCAGGTTTA+GGG + chr1_1:24801800-24801819 Msa0015370:CDS 40.0%
ATTTGCCACCAGCAATAATG+AGG + chr1_1:24801833-24801852 Msa0015370:CDS 40.0%
TTTGCCACCAGCAATAATGA+GGG + chr1_1:24801834-24801853 Msa0015370:CDS 40.0%
GAAGCTGAAGAGGTTATGTT+TGG + chr1_1:24801892-24801911 Msa0015370:CDS 40.0%
GATGAGGTTCTTCAGAAAAC+TGG + chr1_1:24801922-24801941 Msa0015370:CDS 40.0%
TCTTCAGAAAACTGGTGTGA+AGG + chr1_1:24801930-24801949 Msa0015370:CDS 40.0%
GTGTGAAGGCTAAGGATATT+GGG + chr1_1:24801944-24801963 Msa0015370:CDS 40.0%
! GGCTAAGGATATTGGGATTT+TGG + chr1_1:24801951-24801970 Msa0015370:CDS 40.0%
ACAATCATGGCAGAAAGAGA+AGG - chr1_1:24802006-24802025 None:intergenic 40.0%
! GAGTTATAACCTTGGTGGTA+TGG + chr1_1:24802056-24802075 Msa0015370:CDS 40.0%
TCACAACAGTTCGTTGAGAT+TGG - chr1_1:24802318-24802337 None:intergenic 40.0%
TCTCAACGAACTGTTGTGAT+TGG + chr1_1:24802319-24802338 Msa0015370:intron 40.0%
AATCTTCTGCGGTCTGAATT+AGG - chr1_1:24802351-24802370 None:intergenic 40.0%
CCTTATTATTTGCAGAGTGG+AGG - chr1_1:24802530-24802549 None:intergenic 40.0%
CCTCCACTCTGCAAATAATA+AGG + chr1_1:24802527-24802546 Msa0015370:intron 40.0%
AAGGATCCCTAACTCTATCA+TGG + chr1_1:24802546-24802565 Msa0015370:intron 40.0%
CTGATCCAATTCAAACGTAC+AGG + chr1_1:24802776-24802795 Msa0015370:intron 40.0%
GTACAGGTTGTAAAGGTTGT+TGG + chr1_1:24802792-24802811 Msa0015370:intron 40.0%
!!! GGTTGTTGGAAGTTTTTTGC+TGG + chr1_1:24802806-24802825 Msa0015370:intron 40.0%
AACTTGGATGCATGGAACAT+TGG - chr1_1:24802856-24802875 None:intergenic 40.0%
GTCCATAACTATGGGAAACT+TGG - chr1_1:24802872-24802891 None:intergenic 40.0%
GCCGTTTGATGAAAATCAGA+CGG + chr1_1:24802952-24802971 Msa0015370:intron 40.0%
! GCCGTCTGATTTTCATCAAA+CGG - chr1_1:24802956-24802975 None:intergenic 40.0%
! AACTTGTTTCCCTAGCTAGT+TGG - chr1_1:24803248-24803267 None:intergenic 40.0%
ATATGCCTTAGTAGTGAGCA+TGG + chr1_1:24803532-24803551 Msa0015370:CDS 40.0%
!!! ATTGGTATTTTGATCGGAGG+CGG - chr1_1:24803667-24803686 None:intergenic 40.0%
!!! GTTTGTTTTGAGTGCTTCTC+CGG - chr1_1:24803810-24803829 None:intergenic 40.0%
ACCATTAGTCCTACCTATGT+CGG + chr1_1:24803844-24803863 Msa0015370:CDS 40.0%
AATAAGAGCTGTTCCGACAT+AGG - chr1_1:24803860-24803879 None:intergenic 40.0%
!!! CGGAACAGCTCTTATTTTTC+GGG + chr1_1:24803864-24803883 Msa0015370:CDS 40.0%
!!! GCTCTTATTTTTCGGGACAT+TGG + chr1_1:24803871-24803890 Msa0015370:CDS 40.0%
!! AAGAGCTGTTTTGGATGAGT+TGG + chr1_1:24803982-24804001 Msa0015370:CDS 40.0%
ATTGGCATATGGAACCATCA+AGG + chr1_1:24804026-24804045 Msa0015370:CDS 40.0%
CTATTCAGTGTCATCCTTGA+TGG - chr1_1:24804043-24804062 None:intergenic 40.0%
CTTATACTGAAGCTAAAGGG+AGG + chr1_1:24804104-24804123 Msa0015370:CDS 40.0%
! TGGCAAATTGCATTTGGTTC+TGG + chr1_1:24804148-24804167 Msa0015370:CDS 40.0%
CACACAGTTATTGTCCATGT+TGG + chr1_1:24804457-24804476 Msa0015370:three_prime_UTR 40.0%
! CATTTTGTGCATGCCCTTCA+TGG + chr1_1:24801339-24801358 Msa0015370:exon 45.0%
ACTGAAGCTACTCCAAAGAG+AGG - chr1_1:24801517-24801536 None:intergenic 45.0%
! TCGTCCAAGAGGCATATACT+TGG + chr1_1:24801660-24801679 Msa0015370:CDS 45.0%
CAGCCATACAAGGATTAGGT+GGG - chr1_1:24801861-24801880 None:intergenic 45.0%
TCAGCCATACAAGGATTAGG+TGG - chr1_1:24801862-24801881 None:intergenic 45.0%
GCTTCAGCCATACAAGGATT+AGG - chr1_1:24801865-24801884 None:intergenic 45.0%
ATCCTTGTATGGCTGAAGCA+AGG + chr1_1:24801866-24801885 Msa0015370:CDS 45.0%
TTCCTTGCTTCAGCCATACA+AGG - chr1_1:24801871-24801890 None:intergenic 45.0%
AGCAAGGAAAGAAGCTGAAG+AGG + chr1_1:24801882-24801901 Msa0015370:CDS 45.0%
GAAAACTGGTGTGAAGGCTA+AGG + chr1_1:24801936-24801955 Msa0015370:CDS 45.0%
GGTGTGAAGGCTAAGGATAT+TGG + chr1_1:24801943-24801962 Msa0015370:CDS 45.0%
! ATGGCAGAAAGAGAAGGTGT+TGG - chr1_1:24802000-24802019 None:intergenic 45.0%
TACTACCTGTAGGAGCTGTT+TGG - chr1_1:24802115-24802134 None:intergenic 45.0%
! TCGTAGTCGTTGACTGAGAT+TGG - chr1_1:24802415-24802434 None:intergenic 45.0%
TGGATGCATGGAACATTGGA+GGG - chr1_1:24802852-24802871 None:intergenic 45.0%
TTGGATGCATGGAACATTGG+AGG - chr1_1:24802853-24802872 None:intergenic 45.0%
CTATGGGAAACTTGGATGCA+TGG - chr1_1:24802864-24802883 None:intergenic 45.0%
GTTCTCCATGCTCACTACTA+AGG - chr1_1:24803540-24803559 None:intergenic 45.0%
GAAGACGACACAAAGCAAGT+CGG + chr1_1:24803752-24803771 Msa0015370:CDS 45.0%
AAAGACCTAATGGCTGTTGC+CGG + chr1_1:24803788-24803807 Msa0015370:CDS 45.0%
TCCGACATAGGTAGGACTAA+TGG - chr1_1:24803848-24803867 None:intergenic 45.0%
CAAGGATTCTTCTCCTTTGC+AGG - chr1_1:24804220-24804239 None:intergenic 45.0%
CTGCAAAGGAGAAGAATCCT+TGG + chr1_1:24804218-24804237 Msa0015370:CDS 45.0%
GACACTTTAGGCACATGAAC+AGG - chr1_1:24804265-24804284 None:intergenic 45.0%
!!! TTTTGTTTATAAAATATTAT+GGG + chr1_1:24803212-24803231 Msa0015370:intron 5.0%
GGTCCCACCTAATCCTTGTA+TGG + chr1_1:24801855-24801874 Msa0015370:CDS 50.0%
CACTACAACCCATACCACCA+AGG - chr1_1:24802068-24802087 None:intergenic 50.0%
TCAACGACTACGACTGCGAT+TGG + chr1_1:24802422-24802441 Msa0015370:intron 50.0%
TATTTATGCCACGCCGCCTA+AGG + chr1_1:24802686-24802705 Msa0015370:intron 50.0%
ATTTATGCCACGCCGCCTAA+GGG + chr1_1:24802687-24802706 Msa0015370:intron 50.0%
!! GGGAATGGAGCCCCATTTTT+AGG + chr1_1:24802708-24802727 Msa0015370:intron 50.0%
! TTCGGACCGTGTGGACTAAT+TGG - chr1_1:24803685-24803704 None:intergenic 50.0%
GGTGCAGACGACAAATCCTA+CGG + chr1_1:24803713-24803732 Msa0015370:CDS 50.0%
TTCTTGAAAGACGCAGCCGT+AGG - chr1_1:24803732-24803751 None:intergenic 50.0%
AGAGCTGTTCCGACATAGGT+AGG - chr1_1:24803856-24803875 None:intergenic 50.0%
! TGCTGGTGGAAGAGCTGTTT+TGG + chr1_1:24803973-24803992 Msa0015370:CDS 50.0%
GGGACCCTCATTATTGCTGG+TGG - chr1_1:24801841-24801860 None:intergenic 55.0%
GGTGGGACCCTCATTATTGC+TGG - chr1_1:24801844-24801863 None:intergenic 55.0%
! GGTGGTATGGGTTGTAGTGC+TGG + chr1_1:24802069-24802088 Msa0015370:CDS 55.0%
CCTGTAGGAGCTGTTTGGCA+AGG - chr1_1:24802110-24802129 None:intergenic 55.0%
CCTTGCCAAACAGCTCCTAC+AGG + chr1_1:24802107-24802126 Msa0015370:CDS 55.0%
TTTATGCCACGCCGCCTAAG+GGG + chr1_1:24802688-24802707 Msa0015370:intron 55.0%
AATGGGGCTCCATTCCCCTT+AGG - chr1_1:24802705-24802724 None:intergenic 55.0%
!! ATTTTGATCGGAGGCGGTCG+CGG - chr1_1:24803661-24803680 None:intergenic 55.0%
CGTCTGCACCTTTGTGCGTT+CGG - chr1_1:24803703-24803722 None:intergenic 55.0%
CTTCTCCGGCAACAGCCATT+AGG - chr1_1:24803796-24803815 None:intergenic 55.0%
! TTTTGATCGGAGGCGGTCGC+GGG - chr1_1:24803660-24803679 None:intergenic 60.0%
CTTTGTGCGTTCGGACCGTG+TGG - chr1_1:24803694-24803713 None:intergenic 60.0%
CACACGGTCCGAACGCACAA+AGG + chr1_1:24803692-24803711 Msa0015370:CDS 60.0%
TCCATTCCCCTTAGGCGGCG+TGG - chr1_1:24802697-24802716 None:intergenic 65.0%
GGGGCTCCATTCCCCTTAGG+CGG - chr1_1:24802702-24802721 None:intergenic 65.0%
TTTGATCGGAGGCGGTCGCG+GGG - chr1_1:24803659-24803678 None:intergenic 65.0%
GCCACGCCGCCTAAGGGGAA+TGG + chr1_1:24802693-24802712 Msa0015370:intron 70.0%
!! GGTCGCGGGGCTTGTTGGAG+AGG - chr1_1:24803646-24803665 None:intergenic 70.0%
GAGGCGGTCGCGGGGCTTGT+TGG - chr1_1:24803651-24803670 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 24801133 24804539 24801133 ID=Msa0015370;Name=Msa0015370
chr1_1 mRNA 24801133 24804539 24801133 ID=Msa0015370-mRNA-1;Parent=Msa0015370;Name=Msa0015370-mRNA-1;_AED=0.02;_eAED=0.02;_QI=216|1|1|1|1|1|2|236|521
chr1_1 exon 24801133 24802128 24801133 ID=Msa0015370-mRNA-1:exon:8559;Parent=Msa0015370-mRNA-1
chr1_1 exon 24803518 24804539 24803518 ID=Msa0015370-mRNA-1:exon:8560;Parent=Msa0015370-mRNA-1
chr1_1 five_prime_UTR 24801133 24801348 24801133 ID=Msa0015370-mRNA-1:five_prime_utr;Parent=Msa0015370-mRNA-1
chr1_1 CDS 24801349 24802128 24801349 ID=Msa0015370-mRNA-1:cds;Parent=Msa0015370-mRNA-1
chr1_1 CDS 24803518 24804303 24803518 ID=Msa0015370-mRNA-1:cds;Parent=Msa0015370-mRNA-1
chr1_1 three_prime_UTR 24804304 24804539 24804304 ID=Msa0015370-mRNA-1:three_prime_utr;Parent=Msa0015370-mRNA-1
Gene Sequence

>Msa0015370

ATGCCCTTCATGGAACAGCAAAATAATCAACAAGATCATAATTCTAGAAGAAGCATTTCTTTTGAAAGAAGTAAACTCCCCAATTTTTTAATATCCGTGAAACTAAAATATGTGAAACTTGGTTACCACTATTTGATTTCTAATGCTATGTACCTTGTTTTAATACCTCTCTTTGGAGTAGCTTCAGTTCACTTATCAACTTTTTCAATCAAAGATTTAATCCAATTATATGAAAATCTCAAATTCAACTTTGTGTCAATGCTTATATGTTCAAGTCTAGTGGTATTTCTTGCAACCCTTTATTTCATGTCTCGTCCAAGAGGCATATACTTGGTTGATTTTGCATGCTACAAACCACAAAAACAATTGCAAGTCACAAGAGAGATTTTTGTAGAAAGATCAATTTTAACAAAAGCATTCACAGAAGAAACTCTTTCTTTTCAAAAGAAGATACTTGAGAGGTCAGGTTTAGGGCAAAAGACATATTTGCCACCAGCAATAATGAGGGTCCCACCTAATCCTTGTATGGCTGAAGCAAGGAAAGAAGCTGAAGAGGTTATGTTTGGTGCTATTGATGAGGTTCTTCAGAAAACTGGTGTGAAGGCTAAGGATATTGGGATTTTGGTTGTGAATTGTAGTTTGTTTAATCCAACACCTTCTCTTTCTGCCATGATTGTGAATCATTATAAATTGAGAGGGAATATCTTGAGTTATAACCTTGGTGGTATGGGTTGTAGTGCTGGTCTTATCTCTATTGACCTTGCCAAACAGCTCCTACAGGTACATCCAAACTCATATGCCTTAGTAGTGAGCATGGAGAACATAACACTAAACTGGTATTTCGGCAACGACAGATCAATGCTAGTGCCAAATTGTCTCTTTAGAATGGGAGGAGCAGCAGTTCTCCTCTCCAACAAGCCCCGCGACCGCCTCCGATCAAAATACCAATTAGTCCACACGGTCCGAACGCACAAAGGTGCAGACGACAAATCCTACGGCTGCGTCTTTCAAGAAGAAGACGACACAAAGCAAGTCGGTGTATCACTCTCAAAAGACCTAATGGCTGTTGCCGGAGAAGCACTCAAAACAAACATCACAACATTAGGACCATTAGTCCTACCTATGTCGGAACAGCTCTTATTTTTCGGGACATTGGTTGCGCGAAAAGTCTTCAAGATGAAAATCAAACCATACATTCCTGATTTTAAATTAGCTTTTGAGCATTTTTGTATTCATGCTGGTGGAAGAGCTGTTTTGGATGAGTTGGAGAAAAATCTTGATTTAAGTGATTGGCATATGGAACCATCAAGGATGACACTGAATAGATTTGGCAACACTTCAAGTAGTTCTTTGTGGTATGAATTGGCTTATACTGAAGCTAAAGGGAGGATTAAAAAAGGTGATAGAACTTGGCAAATTGCATTTGGTTCTGGTTTTAAGTGTAATAGTGCTGTTTGGAAAGCATTGAAGACTATTAATCCTGCAAAGGAGAAGAATCCTTGGATTGATGAGATTCATGAGTTTCCTGTTCATGTGCCTAAAGTGTCAAAAGTTATTGGTTCTTAA

Protein sequence

>Msa0015370

MPFMEQQNNQQDHNSRRSISFERSKLPNFLISVKLKYVKLGYHYLISNAMYLVLIPLFGVASVHLSTFSIKDLIQLYENLKFNFVSMLICSSLVVFLATLYFMSRPRGIYLVDFACYKPQKQLQVTREIFVERSILTKAFTEETLSFQKKILERSGLGQKTYLPPAIMRVPPNPCMAEARKEAEEVMFGAIDEVLQKTGVKAKDIGILVVNCSLFNPTPSLSAMIVNHYKLRGNILSYNLGGMGCSAGLISIDLAKQLLQVHPNSYALVVSMENITLNWYFGNDRSMLVPNCLFRMGGAAVLLSNKPRDRLRSKYQLVHTVRTHKGADDKSYGCVFQEEDDTKQVGVSLSKDLMAVAGEALKTNITTLGPLVLPMSEQLLFFGTLVARKVFKMKIKPYIPDFKLAFEHFCIHAGGRAVLDELEKNLDLSDWHMEPSRMTLNRFGNTSSSSLWYELAYTEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALKTINPAKEKNPWIDEIHEFPVHVPKVSKVIGS*