AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0119000

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0119000 MtrunA17_Chr1g0176441 97.709 742 15 1 1 740 1 742 0.0 1475
Msa0119000 MtrunA17_Chr7g0267971 80.780 744 126 9 1 740 1 731 0.0 1169
Msa0119000 MtrunA17_Chr1g0176451 88.552 594 59 3 149 740 1 587 0.0 1066
Msa0119000 MtrunA17_Chr5g0408061 47.635 613 283 6 146 738 44 638 0.0 572
Msa0119000 MtrunA17_Chr1g0198931 47.368 627 282 11 145 740 72 681 0.0 551
Msa0119000 MtrunA17_Chr8g0359931 45.101 643 298 9 127 737 8 627 0.0 542
Msa0119000 MtrunA17_Chr1g0200651 42.368 642 304 7 146 738 44 668 3.04e-177 523
Msa0119000 MtrunA17_Chr3g0102731 46.206 593 274 11 111 670 7 587 1.01e-165 490
Msa0119000 MtrunA17_Chr5g0446901 46.679 557 261 8 139 670 57 602 1.01e-164 488
Msa0119000 MtrunA17_Chr2g0318061 47.880 401 176 5 147 539 1 376 8.98e-121 367
Msa0119000 MtrunA17_Chr7g0263351 32.441 598 358 13 146 709 82 667 1.62e-79 270
Msa0119000 MtrunA17_Chr1g0208391 29.780 591 359 15 108 684 45 593 4.08e-78 265
Msa0119000 MtrunA17_Chr1g0213091 30.442 611 366 9 146 709 73 671 9.43e-77 262
Msa0119000 MtrunA17_Chr4g0039261 30.298 571 368 12 127 681 9 565 5.04e-75 256
Msa0119000 MtrunA17_Chr4g0039251 31.746 567 351 12 157 702 79 630 3.80e-73 252
Msa0119000 MtrunA17_Chr4g0050291 30.702 570 357 14 147 700 26 573 4.77e-71 244
Msa0119000 MtrunA17_Chr4g0050251 30.118 591 373 18 127 700 27 594 5.16e-71 245
Msa0119000 MtrunA17_Chr6g0477811 30.619 565 356 12 149 699 47 589 4.91e-70 243
Msa0119000 MtrunA17_Chr4g0050261 29.968 624 372 21 127 700 27 635 1.31e-69 243
Msa0119000 MtrunA17_Chr2g0318071 47.577 227 103 2 527 737 7 233 2.36e-67 222
Msa0119000 MtrunA17_Chr8g0384391 30.151 597 371 15 169 735 54 634 5.53e-65 228
Msa0119000 MtrunA17_Chr3g0130331 30.213 609 353 20 169 735 56 634 1.81e-64 226
Msa0119000 MtrunA17_Chr2g0316301 29.244 595 354 13 169 734 71 627 6.62e-64 224
Msa0119000 MtrunA17_Chr0c20g0493841 29.443 574 357 14 143 697 826 1370 3.61e-63 229
Msa0119000 MtrunA17_Chr0c20g0493841 32.941 255 135 8 171 390 168 421 2.40e-34 141
Msa0119000 MtrunA17_Chr3g0104621 28.705 641 389 19 113 719 698 1304 4.63e-62 226
Msa0119000 MtrunA17_Chr3g0104621 27.256 543 327 15 171 669 56 574 4.45e-37 150
Msa0119000 MtrunA17_Chr7g0262261 29.140 628 401 15 120 727 751 1354 1.72e-61 224
Msa0119000 MtrunA17_Chr7g0262261 26.186 569 329 17 167 679 129 662 1.65e-41 164
Msa0119000 MtrunA17_Chr4g0050221 28.986 552 348 16 167 701 27 551 2.29e-61 217
Msa0119000 MtrunA17_Chr4g0065231 29.791 574 336 15 148 697 48 578 2.89e-59 212
Msa0119000 MtrunA17_Chr7g0262251 27.258 631 371 17 143 728 794 1381 5.33e-59 217
Msa0119000 MtrunA17_Chr7g0262251 26.816 537 348 17 167 679 171 686 7.99e-39 155
Msa0119000 MtrunA17_Chr8g0393191 42.205 263 147 2 149 406 43 305 5.69e-59 214
Msa0119000 MtrunA17_Chr7g0265991 25.521 576 361 13 143 683 26 568 3.28e-58 209
Msa0119000 MtrunA17_Chr7g0262241 28.520 561 349 15 143 681 846 1376 4.91e-58 214
Msa0119000 MtrunA17_Chr7g0262241 24.673 612 365 17 127 679 117 691 1.54e-36 148
Msa0119000 MtrunA17_Chr1g0148811 28.099 605 382 18 143 728 821 1391 2.57e-56 209
Msa0119000 MtrunA17_Chr1g0148811 31.502 273 151 8 171 408 154 425 9.55e-28 120
Msa0119000 MtrunA17_Chr1g0148841 26.484 657 421 18 72 710 791 1403 3.65e-56 208
Msa0119000 MtrunA17_Chr1g0148841 25.000 548 338 16 171 671 166 687 3.43e-32 134
Msa0119000 MtrunA17_Chr7g0262231 28.393 560 350 14 143 681 850 1379 4.32e-56 208
Msa0119000 MtrunA17_Chr7g0262231 24.777 561 341 14 170 679 161 691 8.33e-36 146
Msa0119000 MtrunA17_Chr4g0026731 29.000 500 310 13 231 700 39 523 7.50e-56 201
Msa0119000 MtrunA17_Chr5g0411621 43.173 271 144 4 145 406 17 286 9.05e-56 203
Msa0119000 MtrunA17_Chr2g0332211 25.755 695 420 21 94 728 841 1499 1.26e-55 207
Msa0119000 MtrunA17_Chr2g0332211 26.726 565 337 13 164 679 241 777 3.12e-45 175
Msa0119000 MtrunA17_Chr4g0003981 27.474 586 368 15 143 704 833 1385 1.79e-55 206
Msa0119000 MtrunA17_Chr4g0003981 25.800 531 331 12 167 655 169 678 4.08e-34 140
Msa0119000 MtrunA17_Chr7g0261951 27.353 680 435 19 81 734 781 1427 9.09e-55 204
Msa0119000 MtrunA17_Chr7g0261951 24.302 609 371 16 127 679 117 691 4.11e-36 147
Msa0119000 MtrunA17_Chr1g0171351 27.370 559 361 13 143 683 861 1392 1.07e-54 204
Msa0119000 MtrunA17_Chr1g0171351 25.177 564 343 19 171 683 176 711 3.77e-37 150
Msa0119000 MtrunA17_Chr8g0340651 28.055 581 373 13 143 705 872 1425 1.40e-54 204
Msa0119000 MtrunA17_Chr8g0340651 26.795 571 336 18 171 687 178 720 8.48e-43 167
Msa0119000 MtrunA17_Chr7g0265981 26.655 559 365 12 143 683 850 1381 1.47e-54 204
Msa0119000 MtrunA17_Chr7g0265981 25.265 566 354 16 164 683 177 719 1.10e-31 133
Msa0119000 MtrunA17_Chr1g0198291 27.143 560 357 13 143 681 861 1390 9.00e-54 201
Msa0119000 MtrunA17_Chr1g0198291 27.392 533 321 17 171 662 189 696 2.07e-39 157
Msa0119000 MtrunA17_Chr2g0332221 26.007 596 398 15 127 705 806 1375 3.10e-53 199
Msa0119000 MtrunA17_Chr2g0332221 26.726 565 337 13 164 679 160 696 1.45e-44 173
Msa0119000 MtrunA17_Chr2g0332241 25.837 627 416 18 127 734 807 1403 7.06e-53 198
Msa0119000 MtrunA17_Chr2g0332241 27.094 561 340 12 164 679 160 696 2.31e-45 176
Msa0119000 MtrunA17_Chr7g0261971 27.215 632 403 17 127 734 825 1423 7.33e-53 198
Msa0119000 MtrunA17_Chr7g0261971 24.777 561 341 15 170 679 157 687 5.34e-34 140
Msa0119000 MtrunA17_Chr2g0331081 27.509 578 372 13 143 701 858 1407 2.60e-52 197
Msa0119000 MtrunA17_Chr2g0331081 25.000 580 353 18 125 655 138 684 2.42e-37 150
Msa0119000 MtrunA17_Chr1g0199471 30.724 511 307 13 147 630 499 989 3.48e-52 196
Msa0119000 MtrunA17_Chr7g0264441 29.941 511 317 10 146 630 260 755 4.27e-52 194
Msa0119000 MtrunA17_Chr3g0138261 26.531 637 409 17 114 727 806 1406 5.72e-52 196
Msa0119000 MtrunA17_Chr3g0138261 23.646 554 354 15 171 679 166 695 4.07e-37 150
Msa0119000 MtrunA17_Chr5g0429871 27.395 595 387 16 143 719 634 1201 9.88e-52 195
Msa0119000 MtrunA17_Chr5g0429871 26.471 510 310 13 213 679 21 508 1.11e-33 139
Msa0119000 MtrunA17_Chr4g0062871 26.537 618 401 15 131 727 799 1384 1.13e-51 195
Msa0119000 MtrunA17_Chr4g0062871 25.182 548 353 14 171 679 150 679 4.35e-31 131
Msa0119000 MtrunA17_Chr4g0003971 27.201 636 390 17 133 728 782 1384 1.82e-51 194
Msa0119000 MtrunA17_Chr4g0003971 26.868 562 346 16 162 679 150 690 7.10e-38 152
Msa0119000 MtrunA17_Chr7g0262221 27.098 572 353 16 143 681 821 1361 3.64e-50 190
Msa0119000 MtrunA17_Chr7g0262221 25.668 561 347 16 151 671 136 666 1.45e-39 157
Msa0119000 MtrunA17_Chr7g0265971 25.856 584 352 15 143 683 842 1387 5.45e-50 190
Msa0119000 MtrunA17_Chr7g0265971 25.944 609 363 22 128 683 140 713 5.85e-40 159
Msa0119000 MtrunA17_Chr1g0202431 26.797 612 364 17 161 736 40 603 7.89e-50 184
Msa0119000 MtrunA17_Chr4g0028621 30.566 530 314 15 137 630 481 992 2.72e-49 187
Msa0119000 MtrunA17_Chr4g0039231 36.634 303 179 6 230 526 19 314 5.52e-49 183
Msa0119000 MtrunA17_Chr4g0004021 29.701 468 272 14 143 587 830 1263 6.43e-49 186
Msa0119000 MtrunA17_Chr4g0004021 26.426 526 326 13 171 655 171 676 8.41e-36 145
Msa0119000 MtrunA17_Chr7g0265961 25.847 561 354 14 143 685 798 1314 1.08e-48 186
Msa0119000 MtrunA17_Chr7g0265961 25.933 563 340 18 171 683 182 717 3.14e-36 147
Msa0119000 MtrunA17_Chr1g0180971 40.755 265 149 4 147 409 395 653 1.17e-46 177
Msa0119000 MtrunA17_Chr7g0261981 26.101 613 375 21 143 734 828 1383 1.81e-44 173
Msa0119000 MtrunA17_Chr7g0261981 24.098 610 371 16 127 679 117 691 2.37e-35 144
Msa0119000 MtrunA17_Chr7g0262321 28.169 497 286 16 145 616 537 987 1.58e-42 166
Msa0119000 MtrunA17_Chr7g0262321 40.870 115 67 1 277 390 24 138 5.80e-20 95.5
Msa0119000 MtrunA17_Chr2g0327241 24.020 612 423 16 148 734 106 700 7.73e-42 163
Msa0119000 MtrunA17_Chr3g0093331 38.636 220 130 4 191 406 18 236 1.23e-39 147
Msa0119000 MtrunA17_Chr4g0050201 27.578 417 280 8 231 642 22 421 4.73e-39 152
Msa0119000 MtrunA17_Chr4g0069211 37.391 230 135 4 143 365 814 1041 4.79e-37 149
Msa0119000 MtrunA17_Chr4g0069211 29.804 255 132 8 171 390 167 409 3.17e-27 118
Msa0119000 MtrunA17_Chr6g0472481 36.224 196 124 1 171 365 13 208 5.55e-36 137
Msa0119000 MtrunA17_Chr7g0266001 24.425 565 360 16 164 683 56 598 1.41e-34 140
Msa0119000 MtrunA17_Chr4g0047831 51.000 100 38 1 287 386 1 89 6.12e-26 102
Msa0119000 MtrunA17_Chr3g0123411 27.327 333 200 12 85 384 807 1130 3.37e-20 96.3
Msa0119000 MtrunA17_Chr3g0123411 29.562 274 169 9 113 381 217 471 1.18e-13 75.1
Msa0119000 MtrunA17_Chr7g0227391 27.686 242 149 11 149 381 425 649 1.51e-18 90.5
Msa0119000 MtrunA17_Chr1g0178481 32.906 234 130 11 149 373 380 595 1.11e-17 87.4
Msa0119000 MtrunA17_Chr6g0452041 30.337 267 172 9 96 356 302 560 2.06e-17 87.4
Msa0119000 MtrunA17_Chr6g0452041 32.558 215 122 11 171 372 1036 1240 2.29e-14 77.4
Msa0119000 MtrunA17_Chr7g0249091 29.237 236 136 8 168 381 97 323 4.34e-17 83.6
Msa0119000 MtrunA17_Chr6g0452081 34.078 179 107 7 182 356 51 222 6.23e-17 80.9
Msa0119000 MtrunA17_Chr5g0433051 33.488 215 128 10 168 377 478 682 6.45e-17 85.1
Msa0119000 MtrunA17_Chr6g0451911 33.486 218 125 10 171 380 1032 1237 6.60e-17 85.5
Msa0119000 MtrunA17_Chr6g0451911 30.556 252 158 9 113 356 318 560 2.61e-15 80.5
Msa0119000 MtrunA17_Chr6g0451881 29.431 299 186 10 105 389 304 591 6.63e-17 85.5
Msa0119000 MtrunA17_Chr6g0451881 33.180 217 118 12 171 372 1024 1228 2.98e-14 77.0
Msa0119000 MtrunA17_Chr3g0119381 32.701 211 125 7 153 356 398 598 1.42e-16 84.7
Msa0119000 MtrunA17_Chr3g0119381 29.386 228 145 8 138 356 1037 1257 1.73e-13 74.7
Msa0119000 MtrunA17_Chr6g0452111 33.673 196 119 7 165 356 379 567 1.43e-16 84.7
Msa0119000 MtrunA17_Chr6g0452111 31.301 246 146 11 171 405 1035 1268 6.58e-15 79.3
Msa0119000 MtrunA17_Chr7g0264631 29.455 275 170 11 112 381 393 648 3.03e-16 83.6
Msa0119000 MtrunA17_Chr6g0452171 30.942 223 141 8 165 383 372 585 3.41e-16 83.2
Msa0119000 MtrunA17_Chr6g0452171 31.481 216 133 9 171 380 1037 1243 2.40e-15 80.5
Msa0119000 MtrunA17_Chr7g0238421 25.098 255 145 8 180 432 13 223 3.74e-16 78.6
Msa0119000 MtrunA17_Chr1g0193991 29.493 217 142 7 168 381 403 611 3.90e-16 83.2
Msa0119000 MtrunA17_Chr1g0193991 28.028 289 179 12 85 356 968 1244 4.81e-15 79.7
Msa0119000 MtrunA17_Chr4g0069411 28.854 253 161 9 138 381 376 618 3.97e-16 83.2
Msa0119000 MtrunA17_Chr4g0069411 29.245 212 135 8 149 356 1050 1250 2.12e-13 74.3
Msa0119000 MtrunA17_Chr5g0410921 32.227 211 129 9 149 356 356 555 4.75e-16 82.8
Msa0119000 MtrunA17_Chr5g0410921 30.986 213 136 7 171 380 1006 1210 1.37e-12 71.6
Msa0119000 MtrunA17_Chr5g0433071 33.023 215 129 10 168 377 480 684 5.56e-16 82.0
Msa0119000 MtrunA17_Chr6g0452061 30.864 243 151 12 171 405 546 779 6.98e-16 82.0
Msa0119000 MtrunA17_Chr7g0215001 22.716 405 238 13 318 681 1 371 7.85e-16 80.1
Msa0119000 MtrunA17_Chr4g0041871 28.986 207 136 8 154 356 1006 1205 9.46e-16 82.0
Msa0119000 MtrunA17_Chr4g0041871 28.571 238 153 9 153 384 342 568 1.30e-14 78.2
Msa0119000 MtrunA17_Chr3g0128381 25.357 280 171 10 111 380 368 619 1.04e-15 81.3
Msa0119000 MtrunA17_Chr8g0344651 27.243 301 180 13 140 417 580 864 1.08e-15 81.6
Msa0119000 MtrunA17_Chr8g0344651 25.764 229 155 8 154 377 1242 1460 1.63e-11 68.2
Msa0119000 MtrunA17_Chr4g0069361 29.098 244 146 8 153 385 377 604 1.13e-15 81.6
Msa0119000 MtrunA17_Chr4g0069361 30.526 190 108 8 178 356 1060 1236 1.11e-13 75.1
Msa0119000 MtrunA17_Chr5g0412741 29.412 221 134 9 171 381 473 681 1.34e-15 80.9
Msa0119000 MtrunA17_Chr6g0452141 30.370 270 168 10 96 356 303 561 1.39e-15 81.3
Msa0119000 MtrunA17_Chr6g0452141 32.883 222 125 12 171 377 1034 1246 6.04e-15 79.3
Msa0119000 MtrunA17_Chr4g0061601 31.414 191 119 8 171 356 404 587 1.40e-15 80.9
Msa0119000 MtrunA17_Chr1g0180601 28.767 292 181 12 98 381 349 621 1.41e-15 81.3
Msa0119000 MtrunA17_Chr1g0180601 26.778 239 133 10 140 356 1036 1254 4.34e-11 66.6
Msa0119000 MtrunA17_Chr4g0069351 31.019 216 134 8 171 381 395 600 1.57e-15 81.3
Msa0119000 MtrunA17_Chr4g0069351 29.949 197 114 8 171 356 1053 1236 7.09e-14 75.9
Msa0119000 MtrunA17_Chr4g0069221 23.669 338 220 9 371 697 5 315 2.24e-15 78.6
Msa0119000 MtrunA17_Chr1g0194001 28.571 266 170 10 103 356 90 347 2.39e-15 78.6
Msa0119000 MtrunA17_Chr1g0194031 28.571 217 144 7 168 381 398 606 2.49e-15 80.5
Msa0119000 MtrunA17_Chr6g0452071 33.632 223 122 12 171 377 230 442 4.24e-15 78.6
Msa0119000 MtrunA17_Chr7g0257341 31.210 157 97 4 172 326 573 720 4.30e-15 80.1
Msa0119000 MtrunA17_Chr7g0257341 29.592 196 120 8 166 352 1468 1654 5.24e-12 69.7
Msa0119000 MtrunA17_Chr3g0138211 28.085 235 152 9 153 381 395 618 4.61e-15 79.7
Msa0119000 MtrunA17_Chr3g0138211 27.888 251 160 10 111 356 1004 1238 1.52e-11 68.2
Msa0119000 MtrunA17_Chr4g0069401 29.907 214 139 7 171 381 390 595 4.76e-15 79.7
Msa0119000 MtrunA17_Chr4g0069401 28.125 224 145 9 142 356 1018 1234 6.69e-13 72.8
Msa0119000 MtrunA17_Chr7g0233901 29.778 225 147 7 136 356 339 556 1.42e-14 78.2
Msa0119000 MtrunA17_Chr7g0233901 29.412 221 140 11 171 384 1012 1223 1.08e-13 75.1
Msa0119000 MtrunA17_Chr1g0212701 27.148 291 188 11 95 381 351 621 1.69e-14 77.8
Msa0119000 MtrunA17_Chr4g0039821 30.526 190 108 8 178 356 1058 1234 2.52e-14 77.4
Msa0119000 MtrunA17_Chr4g0039821 29.032 217 137 8 171 381 393 598 5.08e-14 76.3
Msa0119000 MtrunA17_Chr2g0285191 32.512 203 121 7 153 348 397 590 3.19e-14 77.0
Msa0119000 MtrunA17_Chr6g0474071 33.668 199 107 10 170 356 229 414 3.49e-14 75.5
Msa0119000 MtrunA17_Chr7g0222781 25.839 298 187 11 153 438 405 680 4.01e-14 76.6
Msa0119000 MtrunA17_Chr6g0481921 30.317 221 138 10 170 384 287 497 4.08e-14 76.6
Msa0119000 MtrunA17_Chr1g0156821 27.311 238 157 8 149 383 994 1218 5.25e-14 76.3
Msa0119000 MtrunA17_Chr6g0486841 28.105 306 179 14 98 384 301 584 1.28e-13 75.1
Msa0119000 MtrunA17_Chr2g0285301 29.167 216 138 8 171 381 381 586 4.70e-13 73.2
Msa0119000 MtrunA17_Chr2g0285311 32.787 183 111 6 171 348 386 561 6.51e-13 72.8
Msa0119000 MtrunA17_Chr4g0060421 27.419 186 107 9 178 352 159 327 7.71e-13 71.2
Msa0119000 MtrunA17_Chr8g0390471 37.755 98 60 1 171 267 5 102 1.92e-12 64.3
Msa0119000 MtrunA17_Chr3g0102741 37.209 86 38 1 667 736 2 87 2.83e-12 63.2
Msa0119000 MtrunA17_Chr3g0132711 25.943 212 142 6 172 379 210 410 4.10e-12 69.7
Msa0119000 MtrunA17_Chr4g0047821 50.877 57 28 0 152 208 31 87 1.69e-11 61.2
Msa0119000 MtrunA17_Chr6g0453051 30.939 181 110 7 182 356 391 562 1.79e-11 68.2
Msa0119000 MtrunA17_Chr6g0453051 28.986 207 134 8 179 381 1033 1230 7.57e-11 65.9
Msa0119000 MtrunA17_Chr4g0026741 43.038 79 43 1 128 206 28 104 1.84e-11 62.4
Msa0119000 MtrunA17_Chr3g0093041 25.316 237 150 7 183 415 207 420 2.66e-11 67.0
Msa0119000 MtrunA17_Chr4g0060471 25.731 171 111 8 187 352 1 160 9.98e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0119000 AT5G06530.2 77.193 741 158 4 8 739 11 749 0.0 1155
Msa0119000 AT5G06530.1 77.193 741 158 4 8 739 11 749 0.0 1155
Msa0119000 AT5G06530.3 76.720 683 148 4 8 681 11 691 0.0 1051
Msa0119000 AT5G06530.4 81.855 496 88 1 188 681 1 496 0.0 849
Msa0119000 AT1G31770.1 46.039 669 304 12 108 740 1 648 0.0 575
Msa0119000 AT4G27420.1 48.571 630 263 9 142 737 30 632 0.0 561
Msa0119000 AT3G13220.1 46.093 627 292 7 146 736 62 678 0.0 555
Msa0119000 AT1G71960.1 44.599 648 281 9 146 738 37 661 1.14e-180 531
Msa0119000 AT3G25620.2 45.245 652 316 12 114 737 34 672 6.97e-179 527
Msa0119000 AT3G25620.1 46.437 407 193 9 146 539 65 459 4.92e-111 345
Msa0119000 AT2G01320.8 31.104 598 370 14 146 725 67 640 2.82e-85 283
Msa0119000 AT2G01320.5 31.104 598 370 14 146 725 67 640 2.82e-85 283
Msa0119000 AT2G01320.2 32.228 543 335 12 146 679 67 585 1.28e-84 283
Msa0119000 AT2G01320.1 32.228 543 335 12 146 679 67 585 1.59e-84 283
Msa0119000 AT2G01320.4 32.228 543 335 12 146 679 67 585 1.59e-84 283
Msa0119000 AT2G01320.3 32.228 543 335 12 146 679 67 585 1.61e-84 283
Msa0119000 AT2G37360.1 32.308 585 351 12 146 701 95 663 4.63e-83 280
Msa0119000 AT2G01320.7 32.839 472 290 9 146 612 67 516 1.17e-78 262
Msa0119000 AT2G01320.6 32.839 472 290 9 146 612 67 516 1.17e-78 262
Msa0119000 AT3G55110.1 31.765 595 375 13 146 723 60 640 1.93e-78 266
Msa0119000 AT3G53510.1 33.750 560 325 10 169 709 124 656 1.09e-77 265
Msa0119000 AT3G55090.1 31.104 598 364 11 146 709 70 653 1.84e-77 264
Msa0119000 AT5G13580.1 32.072 608 341 12 146 709 65 644 2.78e-76 261
Msa0119000 AT3G55130.1 31.197 593 359 16 146 709 70 642 5.52e-76 260
Msa0119000 AT3G55100.1 30.052 579 355 10 143 698 16 567 1.11e-75 258
Msa0119000 AT3G55100.2 30.052 579 355 10 143 698 16 567 1.11e-75 258
Msa0119000 AT2G39350.1 30.569 615 384 9 144 719 62 672 4.22e-74 255
Msa0119000 AT3G21090.1 29.734 639 392 19 134 735 10 628 6.82e-73 251
Msa0119000 AT4G15236.1 29.716 599 375 12 143 728 792 1357 2.20e-72 257
Msa0119000 AT4G15236.1 31.104 299 167 10 145 406 126 422 7.95e-33 137
Msa0119000 AT2G13610.1 31.360 625 372 16 140 735 40 636 5.70e-71 244
Msa0119000 AT4G15233.8 29.421 605 369 14 143 728 785 1350 7.91e-71 253
Msa0119000 AT4G15233.8 31.206 282 145 11 163 406 145 415 3.10e-28 122
Msa0119000 AT4G15233.7 29.421 605 369 14 143 728 776 1341 8.72e-71 253
Msa0119000 AT4G15233.7 34.091 264 152 10 163 406 145 406 3.85e-34 141
Msa0119000 AT4G15233.1 29.421 605 369 14 143 728 794 1359 9.32e-71 253
Msa0119000 AT4G15233.1 32.270 282 151 10 163 406 145 424 1.98e-32 135
Msa0119000 AT4G15233.3 29.421 605 369 14 143 728 732 1297 1.18e-70 252
Msa0119000 AT4G15233.3 32.270 282 151 10 163 406 83 362 2.08e-32 135
Msa0119000 AT4G15233.6 29.421 605 369 14 143 728 732 1297 1.18e-70 252
Msa0119000 AT4G15233.6 32.270 282 151 10 163 406 83 362 2.08e-32 135
Msa0119000 AT1G17840.1 30.017 573 377 11 136 699 35 592 3.30e-70 244
Msa0119000 AT2G37280.1 29.353 603 378 13 143 727 807 1379 3.61e-69 248
Msa0119000 AT2G37280.1 23.784 555 347 18 160 665 142 669 9.69e-31 130
Msa0119000 AT4G15233.2 29.610 564 339 13 143 684 794 1321 3.71e-69 248
Msa0119000 AT4G15233.2 32.270 282 151 10 163 406 145 424 2.11e-32 135
Msa0119000 AT2G37280.3 29.353 603 378 13 143 727 836 1408 4.08e-69 248
Msa0119000 AT2G37280.3 22.774 584 346 18 160 665 142 698 2.26e-28 123
Msa0119000 AT2G37280.4 29.353 603 378 13 143 727 649 1221 5.26e-69 247
Msa0119000 AT2G37280.4 23.340 527 329 17 187 665 12 511 3.17e-26 115
Msa0119000 AT1G51460.1 28.728 637 399 16 141 735 2 625 1.97e-68 238
Msa0119000 AT1G51500.1 30.206 533 343 12 149 668 24 540 2.33e-68 238
Msa0119000 AT4G15230.3 28.526 624 400 15 116 727 777 1366 3.48e-66 239
Msa0119000 AT4G15230.3 24.643 560 350 15 171 683 156 690 1.87e-38 154
Msa0119000 AT4G15230.1 28.526 624 400 15 116 727 777 1366 3.48e-66 239
Msa0119000 AT4G15230.1 24.643 560 350 15 171 683 156 690 1.87e-38 154
Msa0119000 AT4G15230.4 28.526 624 400 15 116 727 698 1287 3.87e-66 239
Msa0119000 AT4G15230.4 24.643 560 350 15 171 683 77 611 2.60e-38 154
Msa0119000 AT2G37280.2 30.275 545 337 11 143 671 807 1324 4.04e-66 239
Msa0119000 AT2G37280.2 23.784 555 347 18 160 665 142 669 8.69e-31 130
Msa0119000 AT4G15215.11 28.663 621 396 13 120 727 777 1363 3.08e-65 236
Msa0119000 AT4G15215.11 25.225 555 353 17 171 683 153 687 4.63e-39 156
Msa0119000 AT4G15215.1 28.663 621 396 13 120 727 770 1356 3.21e-65 236
Msa0119000 AT4G15215.1 24.549 554 351 16 171 683 153 680 2.18e-36 148
Msa0119000 AT4G15215.8 28.663 621 396 13 120 727 767 1353 3.61e-65 236
Msa0119000 AT4G15215.8 24.549 554 351 16 171 683 150 677 2.46e-36 148
Msa0119000 AT4G15215.10 28.663 621 396 13 120 727 767 1353 3.61e-65 236
Msa0119000 AT4G15215.10 24.549 554 351 16 171 683 150 677 2.46e-36 148
Msa0119000 AT4G15215.6 28.663 621 396 13 120 727 767 1353 3.61e-65 236
Msa0119000 AT4G15215.6 24.549 554 351 16 171 683 150 677 2.46e-36 148
Msa0119000 AT4G15215.7 28.663 621 396 13 120 727 767 1353 3.61e-65 236
Msa0119000 AT4G15215.7 24.549 554 351 16 171 683 150 677 2.46e-36 148
Msa0119000 AT4G15215.9 28.663 621 396 13 120 727 774 1360 3.77e-65 236
Msa0119000 AT4G15215.9 25.225 555 353 17 171 683 150 684 5.78e-39 156
Msa0119000 AT4G15215.4 28.663 621 396 13 120 727 774 1360 3.77e-65 236
Msa0119000 AT4G15215.4 25.225 555 353 17 171 683 150 684 5.78e-39 156
Msa0119000 AT4G15215.5 28.663 621 396 13 120 727 774 1360 3.77e-65 236
Msa0119000 AT4G15215.5 25.225 555 353 17 171 683 150 684 5.78e-39 156
Msa0119000 AT4G15215.3 28.663 621 396 13 120 727 774 1360 3.77e-65 236
Msa0119000 AT4G15215.3 25.225 555 353 17 171 683 150 684 5.78e-39 156
Msa0119000 AT4G15215.2 28.663 621 396 13 120 727 774 1360 3.77e-65 236
Msa0119000 AT4G15215.2 25.225 555 353 17 171 683 150 684 5.78e-39 156
Msa0119000 AT4G15233.5 29.340 576 352 13 172 728 677 1216 7.59e-65 234
Msa0119000 AT4G15233.5 34.091 264 152 10 163 406 83 344 4.77e-34 140
Msa0119000 AT4G15233.4 29.340 576 352 13 172 728 677 1216 7.59e-65 234
Msa0119000 AT4G15233.4 34.091 264 152 10 163 406 83 344 4.77e-34 140
Msa0119000 AT3G53480.1 28.171 607 380 15 143 727 844 1416 1.01e-64 234
Msa0119000 AT3G53480.1 24.382 566 364 16 158 681 175 718 1.90e-34 142
Msa0119000 AT1G59870.1 30.576 556 341 14 143 681 861 1388 1.11e-62 228
Msa0119000 AT1G59870.1 26.855 566 331 18 171 683 186 721 8.79e-38 152
Msa0119000 AT4G15230.2 28.799 566 362 13 116 671 777 1311 4.69e-62 226
Msa0119000 AT4G15230.2 24.643 560 350 15 171 683 156 690 1.28e-38 155
Msa0119000 AT2G29940.1 28.974 604 379 15 143 727 820 1392 1.91e-61 225
Msa0119000 AT2G29940.1 28.239 602 355 19 125 679 134 705 1.39e-43 171
Msa0119000 AT1G53270.1 29.520 542 337 12 163 698 42 544 2.17e-61 217
Msa0119000 AT1G15210.1 29.460 611 367 17 127 703 806 1386 5.89e-59 217
Msa0119000 AT1G15210.1 25.357 560 347 16 171 683 184 719 8.69e-38 152
Msa0119000 AT3G16340.1 30.179 560 338 15 143 681 808 1335 1.19e-58 216
Msa0119000 AT3G16340.1 25.907 579 356 17 162 692 153 706 6.21e-39 156
Msa0119000 AT3G16340.2 30.179 560 338 15 143 681 803 1330 1.30e-58 216
Msa0119000 AT3G16340.2 25.433 578 355 16 162 692 153 701 9.02e-37 149
Msa0119000 AT1G15520.1 25.702 677 431 20 83 727 753 1389 4.61e-58 214
Msa0119000 AT1G15520.1 25.314 557 341 17 171 679 169 698 2.58e-38 154
Msa0119000 AT5G19410.1 29.401 551 333 14 148 691 51 552 1.03e-57 207
Msa0119000 AT5G19410.2 29.401 551 333 14 148 691 60 561 1.24e-57 207
Msa0119000 AT2G36380.1 27.549 559 360 13 143 683 846 1377 2.45e-56 209
Msa0119000 AT2G36380.1 24.955 553 360 14 170 683 187 723 6.58e-38 153
Msa0119000 AT1G66950.1 26.930 557 362 13 143 681 847 1376 5.51e-55 205
Msa0119000 AT1G66950.1 25.222 563 344 19 171 683 190 725 1.14e-34 142
Msa0119000 AT4G25750.1 28.545 536 320 15 163 691 22 501 1.17e-54 198
Msa0119000 AT2G26910.1 28.454 608 379 17 143 727 812 1386 4.28e-54 202
Msa0119000 AT2G26910.1 26.486 555 337 17 171 679 150 679 3.89e-36 147
Msa0119000 AT3G30842.1 26.810 649 400 19 103 728 789 1385 3.11e-52 197
Msa0119000 AT3G30842.1 26.750 557 343 19 171 683 161 696 1.25e-42 167
Msa0119000 AT2G28070.2 26.829 615 404 17 148 735 113 708 4.56e-52 193
Msa0119000 AT2G28070.1 26.829 615 404 17 148 735 113 708 4.56e-52 193
Msa0119000 AT2G37010.2 27.603 634 390 18 138 734 475 1076 4.94e-51 193
Msa0119000 AT2G37010.1 27.603 634 390 18 138 734 475 1076 4.94e-51 193
Msa0119000 AT1G53390.1 30.153 524 307 15 140 630 498 995 1.47e-50 191
Msa0119000 AT1G15520.2 27.154 534 326 16 83 587 753 1252 2.28e-49 188
Msa0119000 AT1G15520.2 25.314 557 341 17 171 679 169 698 4.37e-39 156
Msa0119000 AT5G52860.1 27.332 611 327 22 171 736 44 582 2.11e-48 181
Msa0119000 AT5G60740.1 30.214 513 315 12 147 630 497 995 2.86e-46 178
Msa0119000 AT1G10680.2 32.906 234 142 9 153 381 360 583 1.64e-19 94.4
Msa0119000 AT1G10680.1 32.906 234 142 9 153 381 360 583 1.66e-19 94.4
Msa0119000 AT1G10680.1 33.516 182 110 7 179 356 1007 1181 8.18e-12 69.7
Msa0119000 AT1G70610.2 28.315 279 166 13 114 381 244 499 5.44e-18 88.6
Msa0119000 AT1G70610.1 28.315 279 166 13 114 381 425 680 5.60e-18 89.0
Msa0119000 AT4G25960.1 30.380 237 141 10 149 378 401 620 1.03e-17 88.6
Msa0119000 AT4G25960.1 33.880 183 108 7 179 356 1055 1229 7.02e-13 73.2
Msa0119000 AT1G27940.2 28.889 270 167 11 128 381 752 1012 8.80e-17 85.5
Msa0119000 AT1G27940.2 27.801 241 133 9 171 391 174 393 9.81e-16 82.0
Msa0119000 AT3G62150.3 30.275 218 139 8 168 381 417 625 8.93e-17 85.9
Msa0119000 AT3G62150.3 32.039 206 126 9 178 378 1076 1272 1.16e-14 79.0
Msa0119000 AT3G62150.2 30.275 218 139 8 168 381 417 625 8.93e-17 85.9
Msa0119000 AT3G62150.2 32.039 206 126 9 178 378 1076 1272 1.16e-14 79.0
Msa0119000 AT3G62150.1 30.275 218 139 8 168 381 417 625 8.93e-17 85.9
Msa0119000 AT3G62150.1 32.039 206 126 9 178 378 1076 1272 1.16e-14 79.0
Msa0119000 AT1G27940.1 28.889 270 167 11 128 381 966 1226 1.06e-16 85.5
Msa0119000 AT1G27940.1 27.801 241 133 9 171 391 388 607 1.55e-15 81.6
Msa0119000 AT3G28345.1 30.508 236 151 8 153 384 358 584 1.28e-16 85.1
Msa0119000 AT3G28345.1 28.295 258 163 8 126 380 980 1218 9.15e-13 72.8
Msa0119000 AT3G28390.1 27.798 277 170 10 112 384 322 572 1.35e-16 85.1
Msa0119000 AT3G28390.1 30.698 215 136 9 171 380 997 1203 3.52e-14 77.4
Msa0119000 AT3G28415.1 29.958 237 151 8 153 384 337 563 2.22e-16 84.3
Msa0119000 AT3G28415.1 28.369 282 154 14 111 380 954 1199 3.65e-15 80.5
Msa0119000 AT3G28415.2 29.362 235 155 7 153 384 345 571 2.26e-16 84.3
Msa0119000 AT3G28415.2 28.369 282 154 14 111 380 962 1207 3.91e-15 80.5
Msa0119000 AT5G39040.1 33.508 191 115 8 171 356 413 596 2.40e-16 83.6
Msa0119000 AT3G47750.1 24.551 334 185 9 157 478 621 899 8.64e-16 82.4
Msa0119000 AT2G41700.2 26.087 230 140 8 111 326 432 645 1.22e-15 82.0
Msa0119000 AT2G41700.2 28.723 188 121 7 169 352 1429 1607 5.02e-13 73.6
Msa0119000 AT2G36910.1 29.104 268 168 9 147 409 368 618 1.22e-15 82.0
Msa0119000 AT2G36910.1 26.820 261 144 10 124 356 982 1223 1.20e-11 68.9
Msa0119000 AT2G41700.1 26.087 230 140 8 111 326 502 715 1.43e-15 82.0
Msa0119000 AT2G41700.1 28.723 188 121 7 169 352 1471 1649 5.39e-13 73.6
Msa0119000 AT5G58270.1 30.242 248 154 10 140 381 465 699 1.47e-15 81.3
Msa0119000 AT3G47790.1 26.383 235 146 7 157 381 592 809 1.77e-15 81.3
Msa0119000 AT3G28380.1 29.885 261 162 12 165 419 370 615 2.25e-15 81.3
Msa0119000 AT3G28380.1 29.224 219 142 9 171 384 1012 1222 7.75e-14 76.3
Msa0119000 AT1G02520.1 28.936 235 150 8 153 381 380 603 2.31e-15 81.3
Msa0119000 AT1G02520.1 29.319 191 111 8 178 356 1056 1234 2.38e-12 71.2
Msa0119000 AT1G02520.2 28.936 235 150 8 153 381 380 603 2.31e-15 81.3
Msa0119000 AT1G02520.2 29.319 191 111 8 178 356 1056 1234 2.38e-12 71.2
Msa0119000 AT1G02520.3 28.936 235 150 8 153 381 380 603 2.31e-15 81.3
Msa0119000 AT1G02520.3 29.319 191 111 8 178 356 1056 1234 2.38e-12 71.2
Msa0119000 AT5G61700.2 26.263 198 137 3 157 352 601 791 2.77e-15 80.5
Msa0119000 AT5G61700.4 26.263 198 137 3 157 352 601 791 2.77e-15 80.5
Msa0119000 AT1G02530.2 28.253 269 170 10 153 410 367 623 3.44e-15 80.5
Msa0119000 AT1G02530.1 28.253 269 170 10 153 410 367 623 3.46e-15 80.5
Msa0119000 AT1G02530.1 29.843 191 110 8 178 356 1051 1229 2.87e-12 71.2
Msa0119000 AT1G28010.1 28.996 269 168 10 128 381 968 1228 4.63e-15 80.1
Msa0119000 AT1G28010.1 28.395 243 129 10 171 391 389 608 5.22e-15 80.1
Msa0119000 AT2G47000.4 27.155 232 158 7 153 381 383 606 6.40e-15 79.7
Msa0119000 AT5G61700.1 25.991 227 157 5 157 381 601 818 9.60e-15 79.0
Msa0119000 AT2G47000.3 27.155 232 158 7 153 381 383 606 9.79e-15 79.0
Msa0119000 AT2G47000.7 27.155 232 158 7 153 381 383 606 9.79e-15 79.0
Msa0119000 AT2G47000.6 27.155 232 158 7 153 381 383 606 1.09e-14 79.0
Msa0119000 AT2G47000.6 30.097 206 130 9 178 378 1066 1262 9.39e-14 75.9
Msa0119000 AT2G47000.5 27.155 232 158 7 153 381 383 606 1.09e-14 79.0
Msa0119000 AT2G47000.5 30.097 206 130 9 178 378 1066 1262 9.39e-14 75.9
Msa0119000 AT2G47000.1 27.155 232 158 7 153 381 383 606 1.09e-14 79.0
Msa0119000 AT2G47000.1 30.097 206 130 9 178 378 1066 1262 9.39e-14 75.9
Msa0119000 AT2G47000.2 27.155 232 158 7 153 381 383 606 1.10e-14 79.0
Msa0119000 AT3G47770.1 23.794 311 172 9 157 459 590 843 1.15e-14 78.6
Msa0119000 AT5G61690.2 24.723 271 178 9 120 379 493 748 1.22e-14 78.6
Msa0119000 AT3G28360.1 27.076 277 160 11 118 384 327 571 1.24e-14 78.6
Msa0119000 AT3G28360.1 31.132 212 133 9 171 377 998 1201 3.39e-13 73.9
Msa0119000 AT3G47770.2 24.272 309 173 8 157 459 616 869 1.28e-14 78.6
Msa0119000 AT4G18050.1 30.631 222 127 8 171 381 372 577 1.49e-14 78.6
Msa0119000 AT4G18050.2 30.631 222 127 8 171 381 382 587 1.57e-14 78.6
Msa0119000 AT3G47790.3 26.961 204 124 6 157 350 592 780 1.63e-14 78.2
Msa0119000 AT3G47790.2 26.961 204 124 6 157 350 473 661 1.89e-14 77.8
Msa0119000 AT3G47740.1 23.263 331 171 10 159 469 618 885 2.55e-14 77.4
Msa0119000 AT5G61730.1 24.444 270 178 9 121 379 485 739 2.87e-14 77.4
Msa0119000 AT5G61730.2 24.444 270 178 9 121 379 495 749 3.01e-14 77.4
Msa0119000 AT3G47780.1 24.204 314 167 9 157 459 619 872 4.28e-14 76.6
Msa0119000 AT5G61690.1 24.535 269 180 10 120 379 493 747 4.28e-14 77.0
Msa0119000 AT4G25450.3 31.222 221 129 11 171 381 318 525 5.19e-14 75.9
Msa0119000 AT4G28620.1 28.972 214 139 7 168 377 451 655 5.21e-14 76.3
Msa0119000 AT4G25450.1 31.222 221 129 11 171 381 487 694 5.86e-14 76.3
Msa0119000 AT5G61740.3 23.301 309 176 7 157 459 454 707 7.60e-14 75.9
Msa0119000 AT3G47730.1 26.977 215 136 8 172 379 547 747 7.92e-14 75.9
Msa0119000 AT5G61740.2 23.301 309 176 7 157 459 559 812 7.93e-14 75.9
Msa0119000 AT3G55320.1 27.426 237 156 8 153 384 413 638 8.20e-14 76.3
Msa0119000 AT5G61740.1 23.301 309 176 7 157 459 593 846 9.20e-14 75.9
Msa0119000 AT2G39480.1 27.004 237 157 8 153 384 411 636 9.48e-14 75.9
Msa0119000 AT2G39480.2 27.004 237 157 8 153 384 231 456 1.06e-13 75.9
Msa0119000 AT4G28630.1 28.505 214 140 6 168 377 449 653 1.32e-13 75.1
Msa0119000 AT5G46540.1 34.706 170 98 7 171 335 374 535 1.34e-13 75.5
Msa0119000 AT3G47760.1 24.595 309 172 9 157 459 580 833 1.53e-13 75.1
Msa0119000 AT1G65410.1 25.738 237 143 9 168 381 96 322 1.58e-13 73.2
Msa0119000 AT3G47760.3 24.595 309 172 9 157 459 620 873 1.73e-13 74.7
Msa0119000 AT3G47760.2 24.832 298 163 9 168 459 601 843 2.59e-13 74.3
Msa0119000 AT4G01830.2 28.767 219 141 8 168 381 133 341 2.71e-13 74.3
Msa0119000 AT4G01830.2 29.843 191 109 8 178 356 775 952 8.83e-13 72.8
Msa0119000 AT4G01830.1 28.767 219 141 8 168 381 367 575 2.76e-13 74.3
Msa0119000 AT4G01830.1 29.843 191 109 8 178 356 1009 1186 8.75e-13 72.8
Msa0119000 AT4G01820.2 28.704 216 143 7 169 381 363 570 5.80e-13 73.2
Msa0119000 AT4G01820.1 28.704 216 143 7 169 381 363 570 6.54e-13 73.2
Msa0119000 AT4G01820.1 29.508 183 120 6 178 356 1008 1185 1.46e-11 68.9
Msa0119000 AT5G03910.1 28.054 221 134 7 171 380 412 618 9.58e-13 72.0
Msa0119000 AT3G28860.1 28.293 205 132 8 182 381 393 587 3.57e-12 70.9

Find 191 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAAAGCTGTTTCTAGCTTTC+AGG 0.115250 1_3:-42284681 None:intergenic
ACCTGATCTTGCAGATCTTT+TGG 0.163290 1_3:-42294003 None:intergenic
TTATCCACTGCAATCATCTT+AGG 0.173384 1_3:+42293949 Msa0119000:CDS
TCTCCTAGTTGTTTACTTCA+TGG 0.204051 1_3:+42294428 Msa0119000:CDS
TTTGCTTGATTAAGCTTAAT+TGG 0.214749 1_3:+42284630 Msa0119000:five_prime_UTR
TGGAAACTGCTTAACTCTTT+TGG 0.219858 1_3:+42295474 Msa0119000:three_prime_UTR
GCCAGCTTGGGTCTCTCATT+TGG 0.234703 1_3:+42285436 Msa0119000:CDS
TTTGACAAGTTGATCCTTCT+TGG 0.244718 1_3:+42292762 Msa0119000:CDS
AGTAAGAATGGTGAGGAAAA+AGG 0.245082 1_3:-42294475 None:intergenic
TGAGAAACTTGGAATATAAT+TGG 0.249894 1_3:-42291741 None:intergenic
CGGATCCAAGAAATGAAAAT+TGG 0.255486 1_3:-42295019 None:intergenic
CCAGCTTGGGTCTCTCATTT+GGG 0.262142 1_3:+42285437 Msa0119000:CDS
CATCTCACACCTATTGTAAA+TGG 0.262958 1_3:+42295097 Msa0119000:CDS
TGCTCCTTAGTTAATGTCTT+TGG 0.266546 1_3:-42292039 None:intergenic
TGCCATCGGTGCTACGCTTA+TGG 0.280541 1_3:+42294802 Msa0119000:CDS
TGGAAGGTCGCTCGTTGTTC+TGG 0.300189 1_3:-42294379 None:intergenic
TGTAACTGCTATAGTGGATT+AGG 0.300842 1_3:+42295560 Msa0119000:three_prime_UTR
TTTCTTTATTGCGGTGTTCT+GGG 0.306770 1_3:+42294251 Msa0119000:CDS
CATATTATTGCTGTCAAATT+CGG 0.308693 1_3:-42295623 None:intergenic
AGAAAGAGCCATGTTAAATA+AGG 0.313166 1_3:+42294314 Msa0119000:CDS
CGAATTTGACAGCAATAATA+TGG 0.329576 1_3:+42295624 Msa0119000:three_prime_UTR
CTTTATCCTTGCCCTTGTTC+CGG 0.346115 1_3:-42290911 None:intergenic
TGTAAATCCAGGTGAAGTTT+TGG 0.346664 1_3:+42291618 Msa0119000:CDS
TATAGTGGATTAGGTTAATC+TGG 0.347565 1_3:+42295569 Msa0119000:three_prime_UTR
TGATGAACCAACATCTGGTT+TGG 0.348793 1_3:+42292322 Msa0119000:CDS
GGTCTCTCATTTGGGTTCAC+TGG 0.353859 1_3:+42285445 Msa0119000:CDS
GTAACTGCTATAGTTGGAAT+AGG 0.358310 1_3:+42295521 Msa0119000:three_prime_UTR
CAGGGAAGATGATATGAAAA+TGG 0.359034 1_3:-42284662 None:intergenic
ACGGCTGCGTCGCCGGGCCG+TGG 0.360821 1_3:+42285313 Msa0119000:CDS
AAAGGAAGTTTGCTTTACTT+TGG 0.364397 1_3:+42292786 Msa0119000:CDS
GCCTTTGAGTACTACCTTGT+AGG 0.365137 1_3:-42291548 None:intergenic
CTGGTTGTGAAGCAGGGTCT+TGG 0.368739 1_3:+42294776 Msa0119000:intron
TGTTTCTGTACCGTCGGAAT+TGG 0.370495 1_3:+42292917 Msa0119000:CDS
ATCATATCATCATCACTAAA+TGG 0.372505 1_3:-42285505 None:intergenic
GCAGCAGTTGAAACATATAA+TGG 0.375864 1_3:+42292957 Msa0119000:CDS
GAGGATAACGGCTGCGTCGC+CGG 0.377493 1_3:+42285306 Msa0119000:CDS
CTAGTTGTTTACTTCATGGC+TGG 0.384106 1_3:+42294432 Msa0119000:CDS
GATTCCTCTCCAGAAAAGTA+TGG 0.391604 1_3:-42293878 None:intergenic
TTTCTTGATGAACCAACATC+TGG 0.396446 1_3:+42292317 Msa0119000:CDS
TTGACAAGTTGATCCTTCTT+GGG 0.396710 1_3:+42292763 Msa0119000:CDS
CCTCTGCATCATTGCAGCTC+AGG 0.398239 1_3:+42294503 Msa0119000:CDS
TCCATTAGACCTGATATTGC+CGG 0.401149 1_3:+42294398 Msa0119000:CDS
AAGATTTGTAACTGCTATAG+TGG 0.406553 1_3:+42295554 Msa0119000:three_prime_UTR
TCATTTGTTCGCGGAGTATC+CGG 0.406568 1_3:+42292236 Msa0119000:CDS
TTAATGTTTCTTTCACAGTT+AGG 0.407574 1_3:-42291993 None:intergenic
GCTATAGTTGGAATAGGTTA+AGG 0.411961 1_3:+42295527 Msa0119000:three_prime_UTR
ACCTCTAGATGAAGATTTGA+AGG 0.415322 1_3:+42293801 Msa0119000:CDS
CTCCGCCAGCTGATCTGATT+GGG 0.417994 1_3:-42285188 None:intergenic
AGGATAACGGCTGCGTCGCC+GGG 0.418487 1_3:+42285307 Msa0119000:CDS
ACTCCGCCAGCTGATCTGAT+TGG 0.426049 1_3:-42285189 None:intergenic
GAAATACGATGGGGATATCT+AGG 0.427282 1_3:+42285164 Msa0119000:CDS
GACATTAACTAAGGAGCAAA+AGG 0.429040 1_3:+42292044 Msa0119000:CDS
GAGAGGAAGAGAGTTTGTAT+TGG 0.429303 1_3:+42292263 Msa0119000:CDS
ATGGATTACTTCCAATCTAT+AGG 0.431732 1_3:+42292825 Msa0119000:CDS
AATGCTTGTTAGCATTAGTA+AGG 0.432335 1_3:+42295318 Msa0119000:three_prime_UTR
TGGAAAAGCATCAGAATCAA+TGG 0.437688 1_3:+42292806 Msa0119000:CDS
TTGTGAAACAGTCTACTTGA+TGG 0.442523 1_3:-42292738 None:intergenic
ATGCTAACAAGCATTTCAAT+TGG 0.449102 1_3:-42295310 None:intergenic
AAGAGCAACAACTTTGGCTT+CGG 0.451565 1_3:+42294832 Msa0119000:CDS
GAGGAGAAGGATATCTTGAA+TGG 0.451796 1_3:+42291583 Msa0119000:CDS
AAAGCTGTTTCTAGCTTTCA+GGG 0.455098 1_3:-42284680 None:intergenic
AGCTTTGTAACTGCTATAGT+TGG 0.456222 1_3:+42295515 Msa0119000:three_prime_UTR
TATCCACTGCAATCATCTTA+GGG 0.456788 1_3:+42293950 Msa0119000:CDS
ATCATCATCACTAAATGGTC+TGG 0.461458 1_3:-42285500 None:intergenic
TCGTGCTTCAAGTGCCAGCT+TGG 0.464129 1_3:+42285423 Msa0119000:CDS
CCCAAAAGATCTGCAAGATC+AGG 0.464297 1_3:+42294002 Msa0119000:CDS
TTTAAACGAACTTCAAAAGC+AGG 0.464734 1_3:+42295275 Msa0119000:three_prime_UTR
TTCTGTACCGTCGGAATTGG+AGG 0.465513 1_3:+42292920 Msa0119000:CDS
AACCTCCAATCATAGTATCT+TGG 0.465969 1_3:-42292214 None:intergenic
ATTCCAAGTTTCTCAAAAGC+AGG 0.470728 1_3:+42291749 Msa0119000:CDS
GCAAACTTCCTTTCCCAAGA+AGG 0.471774 1_3:-42292776 None:intergenic
AAAATCAAGCCGGAGGATAA+CGG 0.473611 1_3:+42285294 Msa0119000:CDS
ACCGGCAATATCAGGTCTAA+TGG 0.473629 1_3:-42294399 None:intergenic
ATGGAGAGAGGAAATACGAT+GGG 0.479949 1_3:+42285154 Msa0119000:CDS
GTGATGACCTTCATGCTGGC+TGG 0.479974 1_3:+42294860 Msa0119000:CDS
CTGGTATCAGCAATTTGATC+AGG 0.483964 1_3:-42285481 None:intergenic
GCGGTGAACATCCTATAGAT+TGG 0.484045 1_3:-42292836 None:intergenic
TGGTTTCTGCTAAAAGAGAA+TGG 0.485995 1_3:+42293830 Msa0119000:CDS
TTAGATGTCATCTATGAACT+TGG 0.487206 1_3:+42292078 Msa0119000:CDS
AATAAAATACAATATACATA+TGG 0.492132 1_3:-42295369 None:intergenic
GGTTTCTGCTAAAAGAGAAT+GGG 0.495685 1_3:+42293831 Msa0119000:CDS
AAGAGAATGGGGAGCAAGAT+GGG 0.496506 1_3:+42293843 Msa0119000:CDS
CGTGCTTCAAGTGCCAGCTT+GGG 0.499139 1_3:+42285424 Msa0119000:CDS
GGAGAATGAAACTTCAATAG+AGG 0.499548 1_3:+42295206 Msa0119000:CDS
GAAGTAAGAACTCACACATA+AGG 0.500331 1_3:+42285338 Msa0119000:CDS
GGATCCAAGAAATGAAAATT+GGG 0.504457 1_3:-42295018 None:intergenic
TACTGAACCTATATCTCTAA+AGG 0.505583 1_3:+42290948 Msa0119000:CDS
ACTTAAAATTGACTAATATG+TGG 0.505933 1_3:-42295595 None:intergenic
GCAGAGGAAAACAGTAAGAA+TGG 0.507829 1_3:-42294487 None:intergenic
TTCTTTATTGCGGTGTTCTG+GGG 0.509341 1_3:+42294252 Msa0119000:CDS
ACTAGTCGACGCATCAGTAC+CGG 0.509461 1_3:+42295431 Msa0119000:three_prime_UTR
TGCGCGTTCCTTATTTAACA+TGG 0.510054 1_3:-42294322 None:intergenic
TCTATGAACTTGGCTTAGAA+AGG 0.510955 1_3:+42292088 Msa0119000:CDS
TCATGGACAGCTGCTGGTGA+TGG 0.512726 1_3:-42292984 None:intergenic
TTGATGGGTCCCTCAGGAAG+TGG 0.521018 1_3:+42291643 Msa0119000:CDS
ATAAGCCAGCCCACAGTTGG+TGG 0.521779 1_3:+42291700 Msa0119000:CDS
GTCCATAAGCGTAGCACCGA+TGG 0.522413 1_3:-42294804 None:intergenic
TTGGCATTGATGGGTCCCTC+AGG 0.522971 1_3:+42291637 Msa0119000:CDS
CAATCATCTTAGGGTTACTC+TGG 0.523751 1_3:+42293959 Msa0119000:CDS
TTGAGTGATCACTCGACAAA+CGG 0.524711 1_3:+42285241 Msa0119000:CDS
TTCTTACTTCCTCCACGGCC+CGG 0.524863 1_3:-42285325 None:intergenic
GTAAATGGAGTCAAAATTGA+CGG 0.525567 1_3:+42295112 Msa0119000:CDS
TTTAGAGATATAGGTTCAGT+AGG 0.526236 1_3:-42290946 None:intergenic
AGGTGCCAAGATACTATGAT+TGG 0.530050 1_3:+42292209 Msa0119000:intron
AGAATAAGCCAGCCCACAGT+TGG 0.531012 1_3:+42291697 Msa0119000:CDS
TTTAACATGGCTCTTTCTTG+AGG 0.531486 1_3:-42294309 None:intergenic
TAGGACCCAATCAGATCAGC+TGG 0.531729 1_3:+42285183 Msa0119000:CDS
GCCTTCAAATCTTCATCTAG+AGG 0.532060 1_3:-42293802 None:intergenic
TCGGAATTGGAGGATAAAGT+TGG 0.532293 1_3:+42292930 Msa0119000:CDS
TGTTGGGCAGTAATGGAGAG+AGG 0.534730 1_3:+42285142 Msa0119000:intron
GATATCTTGAATGGGATAAG+TGG 0.537617 1_3:+42291592 Msa0119000:CDS
AGGATATTGAAGCCGGAACA+AGG 0.537820 1_3:+42290899 Msa0119000:CDS
AGATCAGCTGGCGGAGTCGA+TGG 0.537835 1_3:+42285195 Msa0119000:CDS
AAACATTAACATACGCGGCT+CGG 0.539188 1_3:+42292007 Msa0119000:CDS
AGGAGAAGGATATCTTGAAT+GGG 0.540544 1_3:+42291584 Msa0119000:CDS
ACTTCCAAAGACATTAACTA+AGG 0.541864 1_3:+42292035 Msa0119000:CDS
GCGACGCAGCCGTTATCCTC+CGG 0.542202 1_3:-42285303 None:intergenic
TGAGCAATAGTTTGTAAGTG+TGG 0.543328 1_3:-42295060 None:intergenic
ATCAATGCCAAAACTTCACC+TGG 0.543773 1_3:-42291625 None:intergenic
CTTGTCTTTCCACTTCCTGA+GGG 0.545367 1_3:-42291652 None:intergenic
TCACTCGACAAACGGAGCAT+TGG 0.545526 1_3:+42285249 Msa0119000:CDS
CATTTATATTTCCATTAGCA+AGG 0.548750 1_3:-42292893 None:intergenic
AAAGAGAATGGGGAGCAAGA+TGG 0.549608 1_3:+42293842 Msa0119000:CDS
GCTGCGTCGCCGGGCCGTGG+AGG 0.549773 1_3:+42285316 Msa0119000:CDS
TCATCAAGAAACAGAATGGA+AGG 0.553309 1_3:-42292305 None:intergenic
CATGACATCAAGTGAGGAGA+AGG 0.553962 1_3:+42291570 Msa0119000:CDS
GCTGGCGGAGTCGATGGTGG+CGG 0.555570 1_3:+42285201 Msa0119000:CDS
AAGTTGATCCTTCTTGGGAA+AGG 0.555829 1_3:+42292768 Msa0119000:CDS
TAGAACCACCAACTGTGGGC+TGG 0.557150 1_3:-42291705 None:intergenic
GTTGAATCCAAACCAGATGT+TGG 0.558682 1_3:-42292329 None:intergenic
GCTGGCTTATTCTTCCTCCA+AGG 0.558936 1_3:-42291687 None:intergenic
AACTCTCTTCCTCTCTCCAC+CGG 0.559243 1_3:-42292255 None:intergenic
ACGAAAGATATGCTAAGAAA+CGG 0.561884 1_3:-42295180 None:intergenic
AACTGTGATGACCTTCATGC+TGG 0.562367 1_3:+42294856 Msa0119000:CDS
TGCCAAGATACTATGATTGG+AGG 0.563639 1_3:+42292212 Msa0119000:CDS
ATAAGTGGTTCTGTAAATCC+AGG 0.564779 1_3:+42291607 Msa0119000:CDS
CCCAAATGAGAGACCCAAGC+TGG 0.565898 1_3:-42285437 None:intergenic
GTTACCTCATGGACAGCTGC+TGG 0.566768 1_3:-42292990 None:intergenic
CTAGTCGACGCATCAGTACC+GGG 0.567290 1_3:+42295432 Msa0119000:three_prime_UTR
CAGGGTCTTGGACTTGCCAT+CGG 0.576772 1_3:+42294788 Msa0119000:intron
ATGACCTTCATGCTGGCTGG+AGG 0.578225 1_3:+42294863 Msa0119000:CDS
TGGTTCATCAAGAAACAGAA+TGG 0.578655 1_3:-42292309 None:intergenic
AGTAGTTGCTCTGATTGCCA+TGG 0.581305 1_3:+42295147 Msa0119000:CDS
ACTTGTCTTTCCACTTCCTG+AGG 0.581307 1_3:-42291653 None:intergenic
AAATGATGTTTCTGTACCGT+CGG 0.583130 1_3:+42292911 Msa0119000:CDS
GACTTTCGAGAAAATCAAGC+CGG 0.585050 1_3:+42285284 Msa0119000:CDS
CAGCCATGAAGTAAACAACT+AGG 0.587179 1_3:-42294431 None:intergenic
GTGAGTTCTTACTTCCTCCA+CGG 0.588268 1_3:-42285330 None:intergenic
GCAGCTGAGGATATTGAAGC+CGG 0.590731 1_3:+42290892 Msa0119000:intron
TCAGCTGGCGGAGTCGATGG+TGG 0.596469 1_3:+42285198 Msa0119000:CDS
TGAAGATTTGAAGGCCAAAG+TGG 0.599686 1_3:+42293810 Msa0119000:CDS
ATTGGAGGTTCATTTGTTCG+CGG 0.600568 1_3:+42292227 Msa0119000:CDS
GTTTCTTTCACAGTTAGGTG+AGG 0.605159 1_3:-42291988 None:intergenic
GTTCACTGATGTGACCTACA+AGG 0.606243 1_3:+42291534 Msa0119000:intron
TCATCTTAGGGTTACTCTGG+TGG 0.607350 1_3:+42293962 Msa0119000:CDS
AGTGATAGAACCACCAACTG+TGG 0.609772 1_3:-42291710 None:intergenic
GTGATAGAACCACCAACTGT+GGG 0.613119 1_3:-42291709 None:intergenic
GCGGAGTATCCGGTGGAGAG+AGG 0.613367 1_3:+42292246 Msa0119000:CDS
GGCATATGAATCTCGAGTTG+CGG 0.613784 1_3:+42293747 Msa0119000:CDS
AAATCCTCCAGCCAGCATGA+AGG 0.615028 1_3:-42294867 None:intergenic
TCTGGAGAGGAATCAAGGAA+AGG 0.616382 1_3:+42293887 Msa0119000:CDS
AACGGAGCATTGGAAGAGAG+TGG 0.620311 1_3:+42285259 Msa0119000:CDS
GCAATATCAGGTCTAATGGA+AGG 0.622159 1_3:-42294395 None:intergenic
GTATCAGCAATTTGATCAGG+AGG 0.625945 1_3:-42285478 None:intergenic
CCTGAGCTGCAATGATGCAG+AGG 0.626912 1_3:-42294503 None:intergenic
ACCTACAAGGTAGTACTCAA+AGG 0.628173 1_3:+42291547 Msa0119000:CDS
TCTTAGCATATCTTTCGTTG+CGG 0.633881 1_3:+42295185 Msa0119000:CDS
ACTTTATCCTCCAATTCCGA+CGG 0.634648 1_3:-42292927 None:intergenic
TTGAAGCCGGAACAAGGGCA+AGG 0.636386 1_3:+42290905 Msa0119000:CDS
GAAACAGTCTACTTGATGGT+TGG 0.636949 1_3:-42292734 None:intergenic
GGTAATTGAAAGACATGTAG+CGG 0.640736 1_3:-42295039 None:intergenic
TTTGTTCGCGGAGTATCCGG+TGG 0.641545 1_3:+42292239 Msa0119000:CDS
GGAGAGGAATCAAGGAAAGG+AGG 0.644007 1_3:+42293890 Msa0119000:CDS
GGATATTGAAGCCGGAACAA+GGG 0.644710 1_3:+42290900 Msa0119000:CDS
TAACCCTAAGATGATTGCAG+TGG 0.650772 1_3:-42293953 None:intergenic
GCTTATTTCCATGAATCCAG+CGG 0.654063 1_3:+42292857 Msa0119000:CDS
GTTTCTGCTAAAAGAGAATG+GGG 0.655333 1_3:+42293832 Msa0119000:CDS
GGAAAACAGTAAGAATGGTG+AGG 0.658084 1_3:-42294482 None:intergenic
AACTTCAAAAGCAGGCAATG+TGG 0.662065 1_3:+42295283 Msa0119000:three_prime_UTR
GCTGGATTCATGGAAATAAG+CGG 0.662590 1_3:-42292855 None:intergenic
AATGGAGTCAAAATTGACGG+TGG 0.668466 1_3:+42295115 Msa0119000:CDS
TGGAGAGAGGAAATACGATG+GGG 0.672500 1_3:+42285155 Msa0119000:CDS
ATCACCAGCAGCTGTCCATG+AGG 0.672924 1_3:+42292986 Msa0119000:CDS
AATGGAGAGAGGAAATACGA+TGG 0.677457 1_3:+42285153 Msa0119000:exon
CAAAGGCATGACATCAAGTG+AGG 0.682074 1_3:+42291564 Msa0119000:CDS
GACCCAATCAGATCAGCTGG+CGG 0.692144 1_3:+42285186 Msa0119000:CDS
TTTCGAGAAAATCAAGCCGG+AGG 0.696648 1_3:+42285287 Msa0119000:CDS
GTCGAGTGATCACTCAACTG+TGG 0.705069 1_3:-42285235 None:intergenic
GATGCTGCAAGACATAGCAG+AGG 0.724923 1_3:+42292373 Msa0119000:CDS
CATCTGAACGATCTTCAAAG+CGG 0.736726 1_3:-42292354 None:intergenic
GAAAGAAACATTAACATACG+CGG 0.789144 1_3:+42292002 Msa0119000:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTATTTTTATTTTTTTTAA+TGG + chr1_3:42287950-42287969 Msa0119000:intron 0.0%
!! ATTAAATATAAATTTGAGAA+AGG + chr1_3:42286003-42286022 Msa0119000:intron 10.0%
!! AATGATATATTTATATGATT+TGG + chr1_3:42286812-42286831 Msa0119000:intron 10.0%
!! AAAATAACAAATCTATATTT+AGG - chr1_3:42287324-42287343 None:intergenic 10.0%
!! ATATGTATTTCAATTAATAA+AGG - chr1_3:42287412-42287431 None:intergenic 10.0%
!! AATAAATATACTTATATGTT+TGG + chr1_3:42289261-42289280 Msa0119000:intron 10.0%
!!! TTATTATTATTGTTATTGTT+TGG + chr1_3:42289965-42289984 Msa0119000:intron 10.0%
!! TAATAGATATAAATTTATGA+AGG + chr1_3:42290522-42290541 Msa0119000:intron 10.0%
!! ATATATATATATATTAGCTA+GGG - chr1_3:42290581-42290600 None:intergenic 10.0%
!! TATATATATATATATTAGCT+AGG - chr1_3:42290582-42290601 None:intergenic 10.0%
!! AATAAAATACAATATACATA+TGG - chr1_3:42295372-42295391 None:intergenic 10.0%
!! GACTATAATATCATATATAT+TGG - chr1_3:42284778-42284797 None:intergenic 15.0%
!! GTTTAATTAACTATTAATAG+AGG - chr1_3:42284842-42284861 None:intergenic 15.0%
!! AATAGATAAGTATATCTTAA+TGG - chr1_3:42285086-42285105 None:intergenic 15.0%
!!! TCTTAGAATATTTTTTTTTG+TGG - chr1_3:42285693-42285712 None:intergenic 15.0%
!!! TAAATTTGTAAGACATTTTA+CGG + chr1_3:42285758-42285777 Msa0119000:intron 15.0%
!!! TATACAATCAAATTTGTTTA+AGG + chr1_3:42286480-42286499 Msa0119000:intron 15.0%
!!! ATACAATCAAATTTGTTTAA+GGG + chr1_3:42286481-42286500 Msa0119000:intron 15.0%
!!! TTTTTATGATTTAACTTTTC+TGG + chr1_3:42286766-42286785 Msa0119000:intron 15.0%
!! TTAATAATATGAAGTGTATT+AGG + chr1_3:42287547-42287566 Msa0119000:intron 15.0%
!!! AAATATAAAGAGTACAAAAA+GGG + chr1_3:42288023-42288042 Msa0119000:intron 15.0%
!!! CAACAATTCTTTTATTTTTA+TGG - chr1_3:42288619-42288638 None:intergenic 15.0%
!! AACAATAATTGTACATTAAT+TGG - chr1_3:42288909-42288928 None:intergenic 15.0%
!!! ATTTTATCAAATATCTTGAA+AGG + chr1_3:42289415-42289434 Msa0119000:intron 15.0%
!!! TTTTATCAAATATCTTGAAA+GGG + chr1_3:42289416-42289435 Msa0119000:intron 15.0%
!! AACATTGTTTAATTGATTAA+TGG + chr1_3:42289678-42289697 Msa0119000:intron 15.0%
!! TATATATATATATTAGCTAG+GGG - chr1_3:42290580-42290599 None:intergenic 15.0%
!!! AGAAACTTTTTCAAATATAT+AGG - chr1_3:42293365-42293384 None:intergenic 15.0%
!! AATATTAAAACATATGCATT+TGG + chr1_3:42293509-42293528 Msa0119000:intron 15.0%
!! GAAAATTTGATCATAAATTT+AGG - chr1_3:42294914-42294933 None:intergenic 15.0%
!! ATACATTGTAATATACTTCA+AGG - chr1_3:42284876-42284895 None:intergenic 20.0%
!! TTAATGGAGAAAAATTATGA+TGG - chr1_3:42285070-42285089 None:intergenic 20.0%
!!! TTACATTTTGTTCAATTTGT+GGG + chr1_3:42285107-42285126 Msa0119000:intron 20.0%
!! GAATGAAATGATAGTAAAAA+TGG - chr1_3:42285546-42285565 None:intergenic 20.0%
!! AATCACTATATCAAAGATTA+CGG + chr1_3:42285574-42285593 Msa0119000:intron 20.0%
!!! GCATTTGATATTGATTTAAT+TGG + chr1_3:42285901-42285920 Msa0119000:intron 20.0%
!!! ATAATTTACTTTTGCAGATA+TGG + chr1_3:42286117-42286136 Msa0119000:intron 20.0%
!!! TAATTTACTTTTGCAGATAT+GGG + chr1_3:42286118-42286137 Msa0119000:intron 20.0%
!! TTTCAAATGAGGAAATATAA+CGG + chr1_3:42286328-42286347 Msa0119000:intron 20.0%
!!! TGTATTACTAGTTCTAAATA+TGG - chr1_3:42286376-42286395 None:intergenic 20.0%
!! ACATATTAAATACGAAGAAA+TGG + chr1_3:42286630-42286649 Msa0119000:intron 20.0%
!! GAACAATATTCCTTAAAAAT+CGG - chr1_3:42286675-42286694 None:intergenic 20.0%
!! TTTGTTTGAATACTATAGAA+GGG + chr1_3:42287232-42287251 Msa0119000:intron 20.0%
!!! GGGACATATTTTAAAAATAT+AGG + chr1_3:42287277-42287296 Msa0119000:intron 20.0%
!! AAACAATAATATGAAAGTTG+AGG - chr1_3:42287903-42287922 None:intergenic 20.0%
!! ATATATTGAGAAAAAGACTA+AGG + chr1_3:42287978-42287997 Msa0119000:intron 20.0%
!!! CTTTTTGTACTCTTTATATT+TGG - chr1_3:42288024-42288043 None:intergenic 20.0%
!!! CAAATATAAAGAGTACAAAA+AGG + chr1_3:42288022-42288041 Msa0119000:intron 20.0%
!!! AATATAAAGAGTACAAAAAG+GGG + chr1_3:42288024-42288043 Msa0119000:intron 20.0%
!! ATGTTACTAACAATTATGAA+GGG - chr1_3:42288067-42288086 None:intergenic 20.0%
!! TATAAACTCAAATTTATGGT+TGG - chr1_3:42288305-42288324 None:intergenic 20.0%
!! CCTTTATAAACTCAAATTTA+TGG - chr1_3:42288309-42288328 None:intergenic 20.0%
!!! CCATAAATTTGAGTTTATAA+AGG + chr1_3:42288306-42288325 Msa0119000:intron 20.0%
!!! ATCTTTTTAAGAAAAGAAAG+AGG + chr1_3:42288374-42288393 Msa0119000:intron 20.0%
!! TTGTACATAAGTAAAATAGT+TGG + chr1_3:42288519-42288538 Msa0119000:intron 20.0%
!!! TCTTGTTATAGAAAGAAAAT+TGG - chr1_3:42289017-42289036 None:intergenic 20.0%
!! GGACCAATTATATATTAATT+AGG + chr1_3:42289116-42289135 Msa0119000:intron 20.0%
!! CGACCTAATTAATATATAAT+TGG - chr1_3:42289122-42289141 None:intergenic 20.0%
!! GATTATCTGATAAGAATTTA+AGG + chr1_3:42289535-42289554 Msa0119000:intron 20.0%
!! TTATACAAATTAACAAGTGA+AGG - chr1_3:42290470-42290489 None:intergenic 20.0%
!! ATATAAATTTATGAAGGTGA+AGG + chr1_3:42290528-42290547 Msa0119000:intron 20.0%
!! TATAAATTTATGAAGGTGAA+GGG + chr1_3:42290529-42290548 Msa0119000:intron 20.0%
!! ATATATATATATTAGCTAGG+GGG - chr1_3:42290579-42290598 None:intergenic 20.0%
!!! ATTTTTACCTTTAGAGATAT+AGG - chr1_3:42290958-42290977 None:intergenic 20.0%
!!! ATTATATGGTTTTCTCAATT+TGG + chr1_3:42291303-42291322 Msa0119000:intron 20.0%
!! TATACTATAACTCATTAAGT+GGG - chr1_3:42291491-42291510 None:intergenic 20.0%
!! ATATACTATAACTCATTAAG+TGG - chr1_3:42291492-42291511 None:intergenic 20.0%
!! CTATCTTATTGATAAAATCA+CGG - chr1_3:42291896-42291915 None:intergenic 20.0%
!!! AAAAAAGTATATCTCCATAT+TGG - chr1_3:42292147-42292166 None:intergenic 20.0%
!!! ATATGGAGATATACTTTTTT+TGG + chr1_3:42292147-42292166 Msa0119000:intron 20.0%
!! ATCAAATTTGATAAGCTATA+TGG - chr1_3:42292458-42292477 None:intergenic 20.0%
!! TGATTAACGTGTTAATTATA+TGG + chr1_3:42292679-42292698 Msa0119000:intron 20.0%
!!! CCATTTTCTTAAATTAATAC+CGG + chr1_3:42293139-42293158 Msa0119000:intron 20.0%
!! TATTCATTCCACTATTATAT+TGG + chr1_3:42293323-42293342 Msa0119000:intron 20.0%
!!! AATATTTTTCGCTACATATA+AGG - chr1_3:42293495-42293514 None:intergenic 20.0%
!!! AACCATTATTTTTTTCTTCT+CGG - chr1_3:42293776-42293795 None:intergenic 20.0%
!!! TTTTATTCAATAAACACTTG+AGG - chr1_3:42294097-42294116 None:intergenic 20.0%
!!! ATGATAACATATCAATGTTT+TGG + chr1_3:42294211-42294230 Msa0119000:intron 20.0%
!! TTTGATCATAAATTTAGGTA+TGG - chr1_3:42294909-42294928 None:intergenic 20.0%
!! ACTTAAAATTGACTAATATG+TGG - chr1_3:42295598-42295617 None:intergenic 20.0%
! TTTGCTTGATTAAGCTTAAT+TGG + chr1_3:42284630-42284649 Msa0119000:five_prime_UTR 25.0%
!! TTAGCATTTTATGCTGAAAA+TGG - chr1_3:42284736-42284755 None:intergenic 25.0%
!! ATTTTCAGCATAAAATGCTA+AGG + chr1_3:42284735-42284754 Msa0119000:intron 25.0%
!! GTTACATTTTGTTCAATTTG+TGG + chr1_3:42285106-42285125 Msa0119000:intron 25.0%
!! TGGGCTAATTAAATTTTGTT+GGG + chr1_3:42285126-42285145 Msa0119000:intron 25.0%
!!! AAGATTGATTTTGATGAGTT+GGG + chr1_3:42285382-42285401 Msa0119000:CDS 25.0%
! ATCATATCATCATCACTAAA+TGG - chr1_3:42285508-42285527 None:intergenic 25.0%
! AATGATAGTAAAAATGGAGA+AGG - chr1_3:42285540-42285559 None:intergenic 25.0%
! ACAATGCATAAATACATGAA+AGG + chr1_3:42285648-42285667 Msa0119000:intron 25.0%
! ATAACAATATGAGAAGTGAT+TGG + chr1_3:42285734-42285753 Msa0119000:intron 25.0%
! AGTCAAATGAGGAAATATAA+CGG + chr1_3:42286296-42286315 Msa0119000:intron 25.0%
!!! ATTTTTTTGATCAAGTAGCA+TGG + chr1_3:42286593-42286612 Msa0119000:intron 25.0%
!! AATTCAAACTCCGATTTTTA+AGG + chr1_3:42286662-42286681 Msa0119000:intron 25.0%
! TCGTATTAATTGCTCAAAAT+AGG + chr1_3:42286789-42286808 Msa0119000:intron 25.0%
!!! TTTATATGATTTGGTGACTT+TGG + chr1_3:42286821-42286840 Msa0119000:intron 25.0%
! TATTGCTCAAAAAGTTAGTT+GGG + chr1_3:42286886-42286905 Msa0119000:intron 25.0%
! GTTTGTTTGAATACTATAGA+AGG + chr1_3:42287231-42287250 Msa0119000:intron 25.0%
!!! ATATTTAGGTCACTTTTGTT+TGG - chr1_3:42287310-42287329 None:intergenic 25.0%
!!! TAAAGAAAGTGTTAGGTTAA+GGG - chr1_3:42287378-42287397 None:intergenic 25.0%
!!! ATAAAGAAAGTGTTAGGTTA+AGG - chr1_3:42287379-42287398 None:intergenic 25.0%
!!! TGTGTTATAAAGAAAGTGTT+AGG - chr1_3:42287385-42287404 None:intergenic 25.0%
! AATTGACACTAATATTGAGT+TGG + chr1_3:42287684-42287703 Msa0119000:intron 25.0%
!! TCTTTATATTTGGTTGACTT+GGG - chr1_3:42288014-42288033 None:intergenic 25.0%
!! ATATAAAGAGTACAAAAAGG+GGG + chr1_3:42288025-42288044 Msa0119000:intron 25.0%
! TGTTACTAACAATTATGAAG+GGG - chr1_3:42288066-42288085 None:intergenic 25.0%
! CATGTTACTAACAATTATGA+AGG - chr1_3:42288068-42288087 None:intergenic 25.0%
! AATAATTGAATCATGCACTT+AGG + chr1_3:42288412-42288431 Msa0119000:intron 25.0%
! TACTTATGTACAAGACTATA+AGG - chr1_3:42288512-42288531 None:intergenic 25.0%
! GTTATAGAAAGAAAATTGGA+AGG - chr1_3:42289013-42289032 None:intergenic 25.0%
! TATTAATTAGGTCGTACTTA+TGG + chr1_3:42289128-42289147 Msa0119000:intron 25.0%
! ATTAATTAGGTCGTACTTAT+GGG + chr1_3:42289129-42289148 Msa0119000:intron 25.0%
! TATATGTTTGGTTGAAATGT+TGG + chr1_3:42289273-42289292 Msa0119000:intron 25.0%
! GTCAATCTCAAATTAATTGA+GGG - chr1_3:42289705-42289724 None:intergenic 25.0%
! AGTCAATCTCAAATTAATTG+AGG - chr1_3:42289706-42289725 None:intergenic 25.0%
! AAGATTATGATAGAGAAAAG+TGG - chr1_3:42290064-42290083 None:intergenic 25.0%
! ATCCTATTAAATTTCACTTG+TGG + chr1_3:42290118-42290137 Msa0119000:intron 25.0%
! TCCTATTAAATTTCACTTGT+GGG + chr1_3:42290119-42290138 Msa0119000:intron 25.0%
!! CTATTTTCACAAAATAGAGA+TGG - chr1_3:42290194-42290213 None:intergenic 25.0%
! TGCCATTAATTACATTTACA+AGG + chr1_3:42290255-42290274 Msa0119000:intron 25.0%
!! TATATATTGCACCCTTTTAA+CGG + chr1_3:42290644-42290663 Msa0119000:intron 25.0%
!! TATCTAGAAAATGATTTGCA+TGG - chr1_3:42290709-42290728 None:intergenic 25.0%
! TCATTATAATTGCCTTGTAT+AGG + chr1_3:42290829-42290848 Msa0119000:intron 25.0%
! CATTATAATTGCCTTGTATA+GGG + chr1_3:42290830-42290849 Msa0119000:intron 25.0%
!! TTCTTATTCCCACATTTTAA+GGG + chr1_3:42290854-42290873 Msa0119000:intron 25.0%
! ATAGTTAACCCTTAAAATGT+GGG - chr1_3:42290865-42290884 None:intergenic 25.0%
! TCAATCTCATGTTCTATTAA+AGG - chr1_3:42291072-42291091 None:intergenic 25.0%
!!! GTAACTTTTCAAGTTATCAT+AGG + chr1_3:42291251-42291270 Msa0119000:intron 25.0%
! ATTTGGTCCTTGAAATTATA+TGG + chr1_3:42291289-42291308 Msa0119000:intron 25.0%
! GAGAAAACCATATAATTTCA+AGG - chr1_3:42291299-42291318 None:intergenic 25.0%
! TGAGAAACTTGGAATATAAT+TGG - chr1_3:42291744-42291763 None:intergenic 25.0%
!! CGTGATTTTATCAATAAGAT+AGG + chr1_3:42291894-42291913 Msa0119000:intron 25.0%
! TTAATGTTTCTTTCACAGTT+AGG - chr1_3:42291996-42292015 None:intergenic 25.0%
! TACAAGCATTATAACCAATA+TGG + chr1_3:42292130-42292149 Msa0119000:intron 25.0%
! AGCATACAATACAAAACTAT+TGG - chr1_3:42292182-42292201 None:intergenic 25.0%
! TAACGTGTTAATTATATGGT+AGG + chr1_3:42292683-42292702 Msa0119000:intron 25.0%
! CATTTATATTTCCATTAGCA+AGG - chr1_3:42292896-42292915 None:intergenic 25.0%
! AAAATAGAAATGTTACCTCA+TGG - chr1_3:42293004-42293023 None:intergenic 25.0%
!! TGAGTTAATTTAAGATGTGT+TGG - chr1_3:42293106-42293125 None:intergenic 25.0%
! CCGGTATTAATTTAAGAAAA+TGG - chr1_3:42293142-42293161 None:intergenic 25.0%
! ATGTAACTTCATAGATATGT+TGG - chr1_3:42293213-42293232 None:intergenic 25.0%
!! CCATTTTCTCAAATTAATAC+CGG + chr1_3:42293243-42293262 Msa0119000:intron 25.0%
!!! ATATATAGGAGTGTTTTATG+TGG - chr1_3:42293351-42293370 None:intergenic 25.0%
! TTTATTGCAAACAGATTACT+TGG + chr1_3:42293412-42293431 Msa0119000:intron 25.0%
!! AATGAACGAACATTGTTATT+TGG - chr1_3:42293593-42293612 None:intergenic 25.0%
! TCTTCTTCAGCATTATTAAA+TGG - chr1_3:42293616-42293635 None:intergenic 25.0%
! TAAAGTGATTCATTTACTCA+TGG - chr1_3:42293667-42293686 None:intergenic 25.0%
! GAATCACTTTATACATCAAT+CGG + chr1_3:42293676-42293695 Msa0119000:intron 25.0%
! AATCACTTTATACATCAATC+GGG + chr1_3:42293677-42293696 Msa0119000:intron 25.0%
!!! TGAATTTTAACAGTATCTAG+TGG + chr1_3:42293723-42293742 Msa0119000:intron 25.0%
! AACCGAGAAGAAAAAAATAA+TGG + chr1_3:42293771-42293790 Msa0119000:CDS 25.0%
!! TTATAACCACTATGGATTTT+CGG - chr1_3:42294048-42294067 None:intergenic 25.0%
! CTTATCATATGTACTTGAAT+AGG - chr1_3:42294164-42294183 None:intergenic 25.0%
! GTAAATATTGCTGTAAAAAC+AGG - chr1_3:42294285-42294304 None:intergenic 25.0%
! ATATAACCAAACCGTTATAA+AGG - chr1_3:42294629-42294648 None:intergenic 25.0%
!!! TTATAACGGTTTGGTTATAT+TGG + chr1_3:42294629-42294648 Msa0119000:intron 25.0%
! TAACAGAAGAATTTAACATG+TGG + chr1_3:42294975-42294994 Msa0119000:intron 25.0%
!!! ATTTTGACTCCATTTACAAT+AGG - chr1_3:42295109-42295128 None:intergenic 25.0%
! ACATATGGTTGAACAAAAAA+AGG - chr1_3:42295357-42295376 None:intergenic 25.0%
! CATATTATTGCTGTCAAATT+CGG - chr1_3:42295626-42295645 None:intergenic 25.0%
! GAAACAGCTTTTACTTCTTA+AGG + chr1_3:42284692-42284711 Msa0119000:five_prime_UTR 30.0%
TTATGCTGAAAATGGAATAG+AGG - chr1_3:42284728-42284747 None:intergenic 30.0%
! ATAGAGGCTTTAACATTAGT+AGG - chr1_3:42284826-42284845 None:intergenic 30.0%
!! GTGGGCTAATTAAATTTTGT+TGG + chr1_3:42285125-42285144 Msa0119000:intron 30.0%
! TAAATTTTGTTGGGCAGTAA+TGG + chr1_3:42285135-42285154 Msa0119000:intron 30.0%
!! GAAGATTGATTTTGATGAGT+TGG + chr1_3:42285381-42285400 Msa0119000:CDS 30.0%
GCATAAATACATGAAAGGTT+CGG + chr1_3:42285653-42285672 Msa0119000:intron 30.0%
CATAAATACATGAAAGGTTC+GGG + chr1_3:42285654-42285673 Msa0119000:intron 30.0%
ATAAATACATGAAAGGTTCG+GGG + chr1_3:42285655-42285674 Msa0119000:intron 30.0%
TTGTTATATGACACTTTGCT+AGG - chr1_3:42285721-42285740 None:intergenic 30.0%
! TATATTTTGTGGTCACCATA+GGG - chr1_3:42286063-42286082 None:intergenic 30.0%
! ATATATTTTGTGGTCACCAT+AGG - chr1_3:42286064-42286083 None:intergenic 30.0%
ACGAGAATGACAATTGAATT+GGG + chr1_3:42286227-42286246 Msa0119000:intron 30.0%
AATGACAATTGAATTGGGTA+AGG + chr1_3:42286232-42286251 Msa0119000:intron 30.0%
ATGACAATTGAATTGGGTAA+GGG + chr1_3:42286233-42286252 Msa0119000:intron 30.0%
TGAAACTCAAAAGTCAAATG+AGG + chr1_3:42286285-42286304 Msa0119000:intron 30.0%
AGGAAATATAACGGTAATTC+TGG + chr1_3:42286305-42286324 Msa0119000:intron 30.0%
AGGAAATATAACGGTAATTC+TGG + chr1_3:42286305-42286324 Msa0119000:intron 30.0%
GTATTGCTCAAAAAGTTAGT+TGG + chr1_3:42286885-42286904 Msa0119000:intron 30.0%
! CTTTTCCAGACAAACTTTAT+AGG + chr1_3:42287830-42287849 Msa0119000:intron 30.0%
CTCTTTATATTTGGTTGACT+TGG - chr1_3:42288015-42288034 None:intergenic 30.0%
! TATAAAGAGTACAAAAAGGG+GGG + chr1_3:42288026-42288045 Msa0119000:intron 30.0%
GCAATTATGCAGATAGAAAT+GGG - chr1_3:42288103-42288122 None:intergenic 30.0%
AGCAATTATGCAGATAGAAA+TGG - chr1_3:42288104-42288123 None:intergenic 30.0%
ACCTTGTATCAACAAAAAGA+AGG + chr1_3:42288265-42288284 Msa0119000:intron 30.0%
! ACCTTCTTTTTGTTGATACA+AGG - chr1_3:42288269-42288288 None:intergenic 30.0%
!!! TTCAAGCTACTATTTTTGCA+AGG + chr1_3:42289054-42289073 Msa0119000:intron 30.0%
CATCTCATTATATGAACAAG+CGG + chr1_3:42289510-42289529 Msa0119000:intron 30.0%
GGAAATCAAAAAAGAGAGAT+TGG - chr1_3:42289622-42289641 None:intergenic 30.0%
ATTCTCATGAAAACACAAGT+GGG - chr1_3:42289814-42289833 None:intergenic 30.0%
ACCCACAAGTGAAATTTAAT+AGG - chr1_3:42290123-42290142 None:intergenic 30.0%
GAGTGTGATTATGTCAATAT+TGG + chr1_3:42290217-42290236 Msa0119000:intron 30.0%
! GGCCTTGTAAATGTAATTAA+TGG - chr1_3:42290260-42290279 None:intergenic 30.0%
!!! ATATTTTTTTAAACCGCCCA+AGG - chr1_3:42290284-42290303 None:intergenic 30.0%
TACTACATGATCCGTTAAAA+GGG - chr1_3:42290658-42290677 None:intergenic 30.0%
ATGCACTTTCTTATAGTACT+TGG - chr1_3:42290781-42290800 None:intergenic 30.0%
! CTTCTTATTCCCACATTTTA+AGG + chr1_3:42290853-42290872 Msa0119000:intron 30.0%
CATAGTTAACCCTTAAAATG+TGG - chr1_3:42290866-42290885 None:intergenic 30.0%
TTTAGAGATATAGGTTCAGT+AGG - chr1_3:42290949-42290968 None:intergenic 30.0%
TACTGAACCTATATCTCTAA+AGG + chr1_3:42290948-42290967 Msa0119000:CDS 30.0%
AATAGAACATGAGATTGATG+TGG + chr1_3:42291074-42291093 Msa0119000:intron 30.0%
GATGAAATGAAGCTTTCATT+AGG + chr1_3:42291120-42291139 Msa0119000:intron 30.0%
TTCATTAGGTATCAAGAACA+CGG + chr1_3:42291134-42291153 Msa0119000:intron 30.0%
TAAACTTGAAACTTTGTGCA+AGG - chr1_3:42291201-42291220 None:intergenic 30.0%
ATATGACACATATTGTGAGA+CGG - chr1_3:42291436-42291455 None:intergenic 30.0%
! ACAAGTCTTTTAAATCTCCT+TGG + chr1_3:42291670-42291689 Msa0119000:CDS 30.0%
AAAAGCAGGTTAAAATCCAA+TGG + chr1_3:42291763-42291782 Msa0119000:intron 30.0%
TTAAAATCCAATGGTTGACT+AGG + chr1_3:42291772-42291791 Msa0119000:intron 30.0%
TAAAATCCAATGGTTGACTA+GGG + chr1_3:42291773-42291792 Msa0119000:intron 30.0%
GTTTGAATTGACGATGAATT+TGG + chr1_3:42291854-42291873 Msa0119000:intron 30.0%
! TACTTACAAGAAGCATATGA+TGG + chr1_3:42291922-42291941 Msa0119000:intron 30.0%
GAAAGAAACATTAACATACG+CGG + chr1_3:42292002-42292021 Msa0119000:CDS 30.0%
ACTTCCAAAGACATTAACTA+AGG + chr1_3:42292035-42292054 Msa0119000:CDS 30.0%
TTAGATGTCATCTATGAACT+TGG + chr1_3:42292078-42292097 Msa0119000:CDS 30.0%
TGTATTGTATGCTCAAAAAC+AGG + chr1_3:42292189-42292208 Msa0119000:intron 30.0%
ATGTTTAATTCTTCGCTTTG+CGG + chr1_3:42292641-42292660 Msa0119000:intron 30.0%
! AAAGGAAGTTTGCTTTACTT+TGG + chr1_3:42292786-42292805 Msa0119000:CDS 30.0%
! ATGGATTACTTCCAATCTAT+AGG + chr1_3:42292825-42292844 Msa0119000:CDS 30.0%
! CCGGTATTAATTTGAGAAAA+TGG - chr1_3:42293246-42293265 None:intergenic 30.0%
ATGTGGATCCAATATAATAG+TGG - chr1_3:42293334-42293353 None:intergenic 30.0%
GTTACTTCATCAGTATCTTA+TGG + chr1_3:42293442-42293461 Msa0119000:intron 30.0%
GAACATTCATGTCAAACAAT+TGG - chr1_3:42293563-42293582 None:intergenic 30.0%
!! ATTTTAACAGTATCTAGTGG+AGG + chr1_3:42293726-42293745 Msa0119000:intron 30.0%
! AGCAATTTTCCATACTTTTC+TGG + chr1_3:42293869-42293888 Msa0119000:CDS 30.0%
!!! CATATCAATGTTTTGGTTTC+AGG + chr1_3:42294218-42294237 Msa0119000:intron 30.0%
AGAAAGAGCCATGTTAAATA+AGG + chr1_3:42294314-42294333 Msa0119000:CDS 30.0%
CTTAAAAAGAGCAACAACTT+TGG + chr1_3:42294826-42294845 Msa0119000:CDS 30.0%
! AAGTCCCAATTTTCATTTCT+TGG + chr1_3:42295014-42295033 Msa0119000:CDS 30.0%
GGATCCAAGAAATGAAAATT+GGG - chr1_3:42295021-42295040 None:intergenic 30.0%
GTAAATGGAGTCAAAATTGA+CGG + chr1_3:42295112-42295131 Msa0119000:CDS 30.0%
ACGAAAGATATGCTAAGAAA+CGG - chr1_3:42295183-42295202 None:intergenic 30.0%
! CAGATATGAAGCAATTTTCT+TGG - chr1_3:42295242-42295261 None:intergenic 30.0%
TTTAAACGAACTTCAAAAGC+AGG + chr1_3:42295275-42295294 Msa0119000:three_prime_UTR 30.0%
ATGCTAACAAGCATTTCAAT+TGG - chr1_3:42295313-42295332 None:intergenic 30.0%
! AATGCTTGTTAGCATTAGTA+AGG + chr1_3:42295318-42295337 Msa0119000:three_prime_UTR 30.0%
CAAAAAAAGAAAAACTCTCC+CGG - chr1_3:42295453-42295472 None:intergenic 30.0%
!!! GAGAGTTTTTCTTTTTTTGG+TGG + chr1_3:42295454-42295473 Msa0119000:three_prime_UTR 30.0%
!! ACTCTTTTGGAAATGTTTCA+AGG + chr1_3:42295487-42295506 Msa0119000:three_prime_UTR 30.0%
AAGATTTGTAACTGCTATAG+TGG + chr1_3:42295554-42295573 Msa0119000:three_prime_UTR 30.0%
!! TATAGTGGATTAGGTTAATC+TGG + chr1_3:42295569-42295588 Msa0119000:three_prime_UTR 30.0%
CGAATTTGACAGCAATAATA+TGG + chr1_3:42295624-42295643 Msa0119000:three_prime_UTR 30.0%
CAGGGAAGATGATATGAAAA+TGG - chr1_3:42284665-42284684 None:intergenic 35.0%
!! AAAGCTGTTTCTAGCTTTCA+GGG - chr1_3:42284683-42284702 None:intergenic 35.0%
!! AAAAGCTGTTTCTAGCTTTC+AGG - chr1_3:42284684-42284703 None:intergenic 35.0%
GAAGTAAGAACTCACACATA+AGG + chr1_3:42285338-42285357 Msa0119000:CDS 35.0%
ATCATCATCACTAAATGGTC+TGG - chr1_3:42285503-42285522 None:intergenic 35.0%
! ATATTTTGTGGTCACCATAG+GGG - chr1_3:42286062-42286081 None:intergenic 35.0%
GTGACCACAAAATATATGTG+TGG + chr1_3:42286067-42286086 Msa0119000:intron 35.0%
ACCACAAAATATATGTGTGG+TGG + chr1_3:42286070-42286089 Msa0119000:intron 35.0%
CCACAAAATATATGTGTGGT+GGG + chr1_3:42286071-42286090 Msa0119000:intron 35.0%
CACAAAATATATGTGTGGTG+GGG + chr1_3:42286072-42286091 Msa0119000:intron 35.0%
!! TTTACTTTTGCAGATATGGG+TGG + chr1_3:42286121-42286140 Msa0119000:intron 35.0%
CACGAGAATGACAATTGAAT+TGG + chr1_3:42286226-42286245 Msa0119000:intron 35.0%
GGGCAAAACAAAATCTAGTA+CGG + chr1_3:42286261-42286280 Msa0119000:intron 35.0%
GGCAAAACAAAATCTAGTAC+GGG + chr1_3:42286262-42286281 Msa0119000:intron 35.0%
!! GGTAATTCTGGTTTCAAATG+AGG + chr1_3:42286317-42286336 Msa0119000:intron 35.0%
! TTTTTGATCAAGTAGCATGG+TGG + chr1_3:42286596-42286615 Msa0119000:intron 35.0%
TCAAGTAAACACAACTCAGT+TGG - chr1_3:42286702-42286721 None:intergenic 35.0%
ACAAACGTACCAATAGCATA+GGG - chr1_3:42286867-42286886 None:intergenic 35.0%
TACAAACGTACCAATAGCAT+AGG - chr1_3:42286868-42286887 None:intergenic 35.0%
TCATGTGAAGCCACTTAATT+TGG + chr1_3:42286926-42286945 Msa0119000:intron 35.0%
CATGTGAAGCCACTTAATTT+GGG + chr1_3:42286927-42286946 Msa0119000:intron 35.0%
CAAACCAAAATTCTTGGTCT+TGG - chr1_3:42286998-42287017 None:intergenic 35.0%
!!! CAAGACCAAGAATTTTGGTT+TGG + chr1_3:42286996-42287015 Msa0119000:intron 35.0%
TGTGACCAAACCAAAATTCT+TGG - chr1_3:42287116-42287135 None:intergenic 35.0%
TGTGACCAAACCAAAATTCT+TGG + chr1_3:42287116-42287135 Msa0119000:intron 35.0%
!!! TAGGACCAAGAATTTTGGTT+TGG - chr1_3:42287124-42287143 None:intergenic 35.0%
TGAATACTATAGAAGGGATG+AGG + chr1_3:42287238-42287257 Msa0119000:intron 35.0%
GAATACTATAGAAGGGATGA+GGG + chr1_3:42287239-42287258 Msa0119000:intron 35.0%
AATACTATAGAAGGGATGAG+GGG + chr1_3:42287240-42287259 Msa0119000:intron 35.0%
AAGTGTATTAGGAGATGAGA+AGG + chr1_3:42287558-42287577 Msa0119000:intron 35.0%
CCTCAAATTGTTCAATCGAT+CGG + chr1_3:42288133-42288152 Msa0119000:intron 35.0%
ATCGAAAGTTACGATTCGAT+CGG - chr1_3:42288196-42288215 None:intergenic 35.0%
GGCTATATGTCTATCATTGT+CGG + chr1_3:42288433-42288452 Msa0119000:intron 35.0%
AGATTGTAGTTAGAGGTTGT+TGG - chr1_3:42288467-42288486 None:intergenic 35.0%
CATGAAGAGATTGTAGTTAG+AGG - chr1_3:42288474-42288493 None:intergenic 35.0%
TTATGGAACAAGTTCTCAAG+AGG - chr1_3:42288602-42288621 None:intergenic 35.0%
ATCATCATAGAGTGAAGTAC+TGG + chr1_3:42288762-42288781 Msa0119000:intron 35.0%
ATCACATCAAGAGTGGAAAT+TGG - chr1_3:42288945-42288964 None:intergenic 35.0%
CACATAAATCACATCAAGAG+TGG - chr1_3:42288952-42288971 None:intergenic 35.0%
!! CTCATTTTGTTGACTATGTG+TGG + chr1_3:42289086-42289105 Msa0119000:intron 35.0%
TTGACTATGTGTGGTCATAA+AGG + chr1_3:42289095-42289114 Msa0119000:intron 35.0%
! TGCGTTTTATCTTTGCACAA+GGG + chr1_3:42289364-42289383 Msa0119000:intron 35.0%
AAAAGAAAGGAGGATGAAAG+GGG - chr1_3:42289643-42289662 None:intergenic 35.0%
CAAAAGAAAGGAGGATGAAA+GGG - chr1_3:42289644-42289663 None:intergenic 35.0%
! CTTTCATCCTCCTTTCTTTT+GGG + chr1_3:42289643-42289662 Msa0119000:intron 35.0%
! CTTTTTCTCTCCCAAAAGAA+AGG - chr1_3:42289656-42289675 None:intergenic 35.0%
TTCACAATTACCACTTGTCT+TGG + chr1_3:42289745-42289764 Msa0119000:intron 35.0%
GATTCTCATGAAAACACAAG+TGG - chr1_3:42289815-42289834 None:intergenic 35.0%
! TTTAAAATAATGTGCGCCCT+TGG - chr1_3:42289855-42289874 None:intergenic 35.0%
TTAATGGCATGCAATGCATA+CGG - chr1_3:42290244-42290263 None:intergenic 35.0%
GTACTACATGATCCGTTAAA+AGG - chr1_3:42290659-42290678 None:intergenic 35.0%
! TGTTATTTATGTGGGGATTC+TGG - chr1_3:42290732-42290751 None:intergenic 35.0%
TCTATTAAAGGTTTGAGCCA+TGG - chr1_3:42291060-42291079 None:intergenic 35.0%
AGGAGAAGGATATCTTGAAT+GGG + chr1_3:42291584-42291603 Msa0119000:CDS 35.0%
GATATCTTGAATGGGATAAG+TGG + chr1_3:42291592-42291611 Msa0119000:CDS 35.0%
! ATAAGTGGTTCTGTAAATCC+AGG + chr1_3:42291607-42291626 Msa0119000:CDS 35.0%
! TGTAAATCCAGGTGAAGTTT+TGG + chr1_3:42291618-42291637 Msa0119000:CDS 35.0%
! AGTCTTTTAAATCTCCTTGG+AGG + chr1_3:42291673-42291692 Msa0119000:CDS 35.0%
ATTCCAAGTTTCTCAAAAGC+AGG + chr1_3:42291749-42291768 Msa0119000:CDS 35.0%
!! TAACCTGCTTTTGAGAAACT+TGG - chr1_3:42291755-42291774 None:intergenic 35.0%
TGCTCCTTAGTTAATGTCTT+TGG - chr1_3:42292042-42292061 None:intergenic 35.0%
GACATTAACTAAGGAGCAAA+AGG + chr1_3:42292044-42292063 Msa0119000:CDS 35.0%
TCTATGAACTTGGCTTAGAA+AGG + chr1_3:42292088-42292107 Msa0119000:CDS 35.0%
ACTTGGCTTAGAAAGGTAAA+TGG + chr1_3:42292095-42292114 Msa0119000:intron 35.0%
AACCTCCAATCATAGTATCT+TGG - chr1_3:42292217-42292236 None:intergenic 35.0%
TCATCAAGAAACAGAATGGA+AGG - chr1_3:42292308-42292327 None:intergenic 35.0%
TGGTTCATCAAGAAACAGAA+TGG - chr1_3:42292312-42292331 None:intergenic 35.0%
TTTCTTGATGAACCAACATC+TGG + chr1_3:42292317-42292336 Msa0119000:CDS 35.0%
TCTTTATCAACGATGAAGAG+AGG - chr1_3:42292421-42292440 None:intergenic 35.0%
CATGCTTACATGCATATGAA+TGG - chr1_3:42292624-42292643 None:intergenic 35.0%
GTGTTAATTATATGGTAGGC+TGG + chr1_3:42292687-42292706 Msa0119000:intron 35.0%
TTGTGAAACAGTCTACTTGA+TGG - chr1_3:42292741-42292760 None:intergenic 35.0%
!! TTTGACAAGTTGATCCTTCT+TGG + chr1_3:42292762-42292781 Msa0119000:CDS 35.0%
!! TTGACAAGTTGATCCTTCTT+GGG + chr1_3:42292763-42292782 Msa0119000:CDS 35.0%
!! TGGAAAAGCATCAGAATCAA+TGG + chr1_3:42292806-42292825 Msa0119000:CDS 35.0%
! TTTTTGCTAGACCTTGCTAA+TGG + chr1_3:42292882-42292901 Msa0119000:CDS 35.0%
! AAATGATGTTTCTGTACCGT+CGG + chr1_3:42292911-42292930 Msa0119000:CDS 35.0%
GCAGCAGTTGAAACATATAA+TGG + chr1_3:42292957-42292976 Msa0119000:CDS 35.0%
ATAGCTGTAGTAACTCGTAA+TGG - chr1_3:42293028-42293047 None:intergenic 35.0%
!! ATGCATTTGGTGCAATTGAT+TGG + chr1_3:42293522-42293541 Msa0119000:intron 35.0%
ACCTCTAGATGAAGATTTGA+AGG + chr1_3:42293801-42293820 Msa0119000:CDS 35.0%
! TCTTTTAGCAGAAACCACTT+TGG - chr1_3:42293827-42293846 None:intergenic 35.0%
TGGTTTCTGCTAAAAGAGAA+TGG + chr1_3:42293830-42293849 Msa0119000:CDS 35.0%
GGTTTCTGCTAAAAGAGAAT+GGG + chr1_3:42293831-42293850 Msa0119000:CDS 35.0%
GTTTCTGCTAAAAGAGAATG+GGG + chr1_3:42293832-42293851 Msa0119000:CDS 35.0%
!! TTTTCCATACTTTTCTGGAG+AGG + chr1_3:42293874-42293893 Msa0119000:CDS 35.0%
TTATCCACTGCAATCATCTT+AGG + chr1_3:42293949-42293968 Msa0119000:CDS 35.0%
TATCCACTGCAATCATCTTA+GGG + chr1_3:42293950-42293969 Msa0119000:CDS 35.0%
!!! ATCTTTTGGGTTCTTAGCAT+CGG - chr1_3:42293992-42294011 None:intergenic 35.0%
!! AAAAGCGCTTATAACCACTA+TGG - chr1_3:42294056-42294075 None:intergenic 35.0%
!! GTACTTGAATAGGCTTTGTT+TGG - chr1_3:42294154-42294173 None:intergenic 35.0%
!! AGGACTGCTTTTCTTTATTG+CGG + chr1_3:42294242-42294261 Msa0119000:CDS 35.0%
! TTTTCTTTATTGCGGTGTTC+TGG + chr1_3:42294250-42294269 Msa0119000:CDS 35.0%
TTTCTTTATTGCGGTGTTCT+GGG + chr1_3:42294251-42294270 Msa0119000:CDS 35.0%
TTTAACATGGCTCTTTCTTG+AGG - chr1_3:42294312-42294331 None:intergenic 35.0%
TCTCCTAGTTGTTTACTTCA+TGG + chr1_3:42294428-42294447 Msa0119000:CDS 35.0%
GTAAGAATGGTGAGGAAAAA+GGG - chr1_3:42294477-42294496 None:intergenic 35.0%
AGTAAGAATGGTGAGGAAAA+AGG - chr1_3:42294478-42294497 None:intergenic 35.0%
!! ACCAGTTGAACTGTTTTGTT+CGG - chr1_3:42294591-42294610 None:intergenic 35.0%
! GTTCAATCACATTTTCATCC+TGG + chr1_3:42294654-42294673 Msa0119000:intron 35.0%
ATAGCTTACAGTGCTAACAA+TGG + chr1_3:42294753-42294772 Msa0119000:intron 35.0%
! ATTTAGGTATGGCTTTTACC+TGG - chr1_3:42294898-42294917 None:intergenic 35.0%
CGGATCCAAGAAATGAAAAT+TGG - chr1_3:42295022-42295041 None:intergenic 35.0%
GGTAATTGAAAGACATGTAG+CGG - chr1_3:42295042-42295061 None:intergenic 35.0%
! TGAGCAATAGTTTGTAAGTG+TGG - chr1_3:42295063-42295082 None:intergenic 35.0%
CATCTCACACCTATTGTAAA+TGG + chr1_3:42295097-42295116 Msa0119000:CDS 35.0%
TCTTAGCATATCTTTCGTTG+CGG + chr1_3:42295185-42295204 Msa0119000:CDS 35.0%
GGAGAATGAAACTTCAATAG+AGG + chr1_3:42295206-42295225 Msa0119000:CDS 35.0%
! CGGGAGAGTTTTTCTTTTTT+TGG + chr1_3:42295451-42295470 Msa0119000:three_prime_UTR 35.0%
! TGGAAACTGCTTAACTCTTT+TGG + chr1_3:42295474-42295493 Msa0119000:three_prime_UTR 35.0%
! AGCTTTGTAACTGCTATAGT+TGG + chr1_3:42295515-42295534 Msa0119000:three_prime_UTR 35.0%
GTAACTGCTATAGTTGGAAT+AGG + chr1_3:42295521-42295540 Msa0119000:three_prime_UTR 35.0%
GCTATAGTTGGAATAGGTTA+AGG + chr1_3:42295527-42295546 Msa0119000:three_prime_UTR 35.0%
!! TGTAACTGCTATAGTGGATT+AGG + chr1_3:42295560-42295579 Msa0119000:three_prime_UTR 35.0%
!! AGTCTTGATTTTGATCTCTG+CGG + chr1_3:42295657-42295676 Msa0119000:three_prime_UTR 35.0%
AATGGAGAGAGGAAATACGA+TGG + chr1_3:42285153-42285172 Msa0119000:exon 40.0%
ATGGAGAGAGGAAATACGAT+GGG + chr1_3:42285154-42285173 Msa0119000:CDS 40.0%
GAAATACGATGGGGATATCT+AGG + chr1_3:42285164-42285183 Msa0119000:CDS 40.0%
TTGAGTGATCACTCGACAAA+CGG + chr1_3:42285241-42285260 Msa0119000:CDS 40.0%
GACTTTCGAGAAAATCAAGC+CGG + chr1_3:42285284-42285303 Msa0119000:CDS 40.0%
AAAATCAAGCCGGAGGATAA+CGG + chr1_3:42285294-42285313 Msa0119000:CDS 40.0%
!! GATTTTGATGAGTTGGGTAG+TGG + chr1_3:42285388-42285407 Msa0119000:CDS 40.0%
GTATCAGCAATTTGATCAGG+AGG - chr1_3:42285481-42285500 None:intergenic 40.0%
CTGGTATCAGCAATTTGATC+AGG - chr1_3:42285484-42285503 None:intergenic 40.0%
! CCCACCACACATATATTTTG+TGG - chr1_3:42286074-42286093 None:intergenic 40.0%
TTGAATTGGGTAAGGGACTA+AGG + chr1_3:42286240-42286259 Msa0119000:intron 40.0%
TGAATTGGGTAAGGGACTAA+GGG + chr1_3:42286241-42286260 Msa0119000:intron 40.0%
CAAACGTACCAATAGCATAG+GGG - chr1_3:42286866-42286885 None:intergenic 40.0%
! TGGACCAAGACCAAGAATTT+TGG + chr1_3:42286991-42287010 Msa0119000:intron 40.0%
GAGATAAGAGAAGAGAGAGA+AGG + chr1_3:42287078-42287097 Msa0119000:intron 40.0%
!! TGGACTAGGACCAAGAATTT+TGG - chr1_3:42287129-42287148 None:intergenic 40.0%
GAGAAAATCTTGTGTGGACT+AGG - chr1_3:42287143-42287162 None:intergenic 40.0%
! TCCACACAAGATTTTCTCCT+AGG + chr1_3:42287145-42287164 Msa0119000:intron 40.0%
ACCTAGGAGAAAATCTTGTG+TGG - chr1_3:42287149-42287168 None:intergenic 40.0%
ATACTATAGAAGGGATGAGG+GGG + chr1_3:42287241-42287260 Msa0119000:intron 40.0%
TGTATTAGGAGATGAGAAGG+TGG + chr1_3:42287561-42287580 Msa0119000:intron 40.0%
GTATTAGGAGATGAGAAGGT+GGG + chr1_3:42287562-42287581 Msa0119000:intron 40.0%
CAGCTCCTATAAAGTTTGTC+TGG - chr1_3:42287838-42287857 None:intergenic 40.0%
CAGACAAACTTTATAGGAGC+TGG + chr1_3:42287836-42287855 Msa0119000:intron 40.0%
CAAACTTTATAGGAGCTGGA+TGG + chr1_3:42287840-42287859 Msa0119000:intron 40.0%
AAAAAGACTAAGGCCCAACA+GGG + chr1_3:42287988-42288007 Msa0119000:intron 40.0%
TAACAATTATGAAGGGGCTG+TGG - chr1_3:42288060-42288079 None:intergenic 40.0%
CCGATCGATTGAACAATTTG+AGG - chr1_3:42288136-42288155 None:intergenic 40.0%
TGTAGTTAGAGGTTGTTGGA+TGG - chr1_3:42288463-42288482 None:intergenic 40.0%
ATAGATCCAACATGACCACT+AGG - chr1_3:42289168-42289187 None:intergenic 40.0%
TAGTGGTCATGTTGGATCTA+TGG + chr1_3:42289167-42289186 Msa0119000:intron 40.0%
! GTGCGTTTTATCTTTGCACA+AGG + chr1_3:42289363-42289382 Msa0119000:intron 40.0%
GAAAATATGACCACACCACA+AGG + chr1_3:42289577-42289596 Msa0119000:intron 40.0%
GAAATAGATTCCTTGTGGTG+TGG - chr1_3:42289590-42289609 None:intergenic 40.0%
CAAGGGAAATAGATTCCTTG+TGG - chr1_3:42289595-42289614 None:intergenic 40.0%
CAAGGAATCTATTTCCCTTG+TGG + chr1_3:42289595-42289614 Msa0119000:intron 40.0%
CCAAAAGAAAGGAGGATGAA+AGG - chr1_3:42289645-42289664 None:intergenic 40.0%
! CCTTTCATCCTCCTTTCTTT+TGG + chr1_3:42289642-42289661 Msa0119000:intron 40.0%
TTTCTCTCCCAAAAGAAAGG+AGG - chr1_3:42289653-42289672 None:intergenic 40.0%
TCCTCGTCTCATAAACATCA+CGG + chr1_3:42289774-42289793 Msa0119000:intron 40.0%
TTACATTTACAAGGCCACCT+TGG + chr1_3:42290264-42290283 Msa0119000:intron 40.0%
TACATTTACAAGGCCACCTT+GGG + chr1_3:42290265-42290284 Msa0119000:intron 40.0%
!!! TTTTTTTAAACCGCCCAAGG+TGG - chr1_3:42290281-42290300 None:intergenic 40.0%
!! GTGGTGGTGTTATTTATGTG+GGG - chr1_3:42290739-42290758 None:intergenic 40.0%
!! GGTGGTGGTGTTATTTATGT+GGG - chr1_3:42290740-42290759 None:intergenic 40.0%
!! TGGTGGTGGTGTTATTTATG+TGG - chr1_3:42290741-42290760 None:intergenic 40.0%
TCACTCAAACAAACATGTGG+TGG - chr1_3:42290758-42290777 None:intergenic 40.0%
TGGTCACTCAAACAAACATG+TGG - chr1_3:42290761-42290780 None:intergenic 40.0%
GGAATAAGAAGCCCTATACA+AGG - chr1_3:42290844-42290863 None:intergenic 40.0%
!!! TTTTGTACCTAGTTCTGCCA+TGG + chr1_3:42291040-42291059 Msa0119000:intron 40.0%
GAACATGGCTAACAATAGCA+TGG + chr1_3:42291165-42291184 Msa0119000:intron 40.0%
AACTTTGTGCAAGGCTGAAA+TGG - chr1_3:42291192-42291211 None:intergenic 40.0%
GGTCATTTGCATGCACAATT+TGG + chr1_3:42291272-42291291 Msa0119000:intron 40.0%
ACCTACAAGGTAGTACTCAA+AGG + chr1_3:42291547-42291566 Msa0119000:CDS 40.0%
GAGGAGAAGGATATCTTGAA+TGG + chr1_3:42291583-42291602 Msa0119000:CDS 40.0%
ATCAATGCCAAAACTTCACC+TGG - chr1_3:42291628-42291647 None:intergenic 40.0%
!! AGGTGAAGTTTTGGCATTGA+TGG + chr1_3:42291627-42291646 Msa0119000:CDS 40.0%
!!! GGTGAAGTTTTGGCATTGAT+GGG + chr1_3:42291628-42291647 Msa0119000:CDS 40.0%
TAGTAACCCTAGTCAACCAT+TGG - chr1_3:42291782-42291801 None:intergenic 40.0%
CGCGGAATCACAAAGTAAAT+TGG - chr1_3:42291827-42291846 None:intergenic 40.0%
TCAATTCAAACATGCATGCG+CGG - chr1_3:42291845-42291864 None:intergenic 40.0%
AAGCATATGATGGCATATGC+AGG + chr1_3:42291932-42291951 Msa0119000:intron 40.0%
TATGATGGCATATGCAGGAT+AGG + chr1_3:42291937-42291956 Msa0119000:intron 40.0%
GTTTCTTTCACAGTTAGGTG+AGG - chr1_3:42291991-42292010 None:intergenic 40.0%
AAACATTAACATACGCGGCT+CGG + chr1_3:42292007-42292026 Msa0119000:CDS 40.0%
AGGTGCCAAGATACTATGAT+TGG + chr1_3:42292209-42292228 Msa0119000:intron 40.0%
TGCCAAGATACTATGATTGG+AGG + chr1_3:42292212-42292231 Msa0119000:CDS 40.0%
ATTGGAGGTTCATTTGTTCG+CGG + chr1_3:42292227-42292246 Msa0119000:CDS 40.0%
GAGAGGAAGAGAGTTTGTAT+TGG + chr1_3:42292263-42292282 Msa0119000:CDS 40.0%
TGATGAACCAACATCTGGTT+TGG + chr1_3:42292322-42292341 Msa0119000:CDS 40.0%
GTTGAATCCAAACCAGATGT+TGG - chr1_3:42292332-42292351 None:intergenic 40.0%
CATCTGAACGATCTTCAAAG+CGG - chr1_3:42292357-42292376 None:intergenic 40.0%
TGATAAGCTATATGGACGAC+AGG - chr1_3:42292450-42292469 None:intergenic 40.0%
! GAAACAGTCTACTTGATGGT+TGG - chr1_3:42292737-42292756 None:intergenic 40.0%
! AAGTTGATCCTTCTTGGGAA+AGG + chr1_3:42292768-42292787 Msa0119000:CDS 40.0%
GCTGGATTCATGGAAATAAG+CGG - chr1_3:42292858-42292877 None:intergenic 40.0%
GCTTATTTCCATGAATCCAG+CGG + chr1_3:42292857-42292876 Msa0119000:CDS 40.0%
ACTTTATCCTCCAATTCCGA+CGG - chr1_3:42292930-42292949 None:intergenic 40.0%
TCGGAATTGGAGGATAAAGT+TGG + chr1_3:42292930-42292949 Msa0119000:CDS 40.0%
!! AAGATGTGTTGGTTTCCTGT+CGG - chr1_3:42293095-42293114 None:intergenic 40.0%
TAAAAGTGAGACGCAGAAAC+CGG - chr1_3:42293161-42293180 None:intergenic 40.0%
TAAAACTGACACGCAAACAC+CGG - chr1_3:42293265-42293284 None:intergenic 40.0%
ACTGACAGAATCACAAACAC+TGG - chr1_3:42293297-42293316 None:intergenic 40.0%
GCCTTCAAATCTTCATCTAG+AGG - chr1_3:42293805-42293824 None:intergenic 40.0%
TGAAGATTTGAAGGCCAAAG+TGG + chr1_3:42293810-42293829 Msa0119000:CDS 40.0%
GATTCCTCTCCAGAAAAGTA+TGG - chr1_3:42293881-42293900 None:intergenic 40.0%
!! ACTTTTCTGGAGAGGAATCA+AGG + chr1_3:42293882-42293901 Msa0119000:CDS 40.0%
TAACCCTAAGATGATTGCAG+TGG - chr1_3:42293956-42293975 None:intergenic 40.0%
CAATCATCTTAGGGTTACTC+TGG + chr1_3:42293959-42293978 Msa0119000:CDS 40.0%
! CCTGATCTTGCAGATCTTTT+GGG - chr1_3:42294005-42294024 None:intergenic 40.0%
! ACCTGATCTTGCAGATCTTT+TGG - chr1_3:42294006-42294025 None:intergenic 40.0%
!!! TCAATGTTTTGGTTTCAGGC+AGG + chr1_3:42294222-42294241 Msa0119000:intron 40.0%
TTCTTTATTGCGGTGTTCTG+GGG + chr1_3:42294252-42294271 Msa0119000:CDS 40.0%
! TGCGCGTTCCTTATTTAACA+TGG - chr1_3:42294325-42294344 None:intergenic 40.0%
GCAATATCAGGTCTAATGGA+AGG - chr1_3:42294398-42294417 None:intergenic 40.0%
TCCATTAGACCTGATATTGC+CGG + chr1_3:42294398-42294417 Msa0119000:CDS 40.0%
! ACAACTAGGAGAAAAAGCAC+CGG - chr1_3:42294420-42294439 None:intergenic 40.0%
CAGCCATGAAGTAAACAACT+AGG - chr1_3:42294434-42294453 None:intergenic 40.0%
CTAGTTGTTTACTTCATGGC+TGG + chr1_3:42294432-42294451 Msa0119000:CDS 40.0%
GGAAAACAGTAAGAATGGTG+AGG - chr1_3:42294485-42294504 None:intergenic 40.0%
GCAGAGGAAAACAGTAAGAA+TGG - chr1_3:42294490-42294509 None:intergenic 40.0%
ACCGAACAAAACAGTTCAAC+TGG + chr1_3:42294587-42294606 Msa0119000:intron 40.0%
AACCAAACCGTTATAAAGGC+CGG - chr1_3:42294625-42294644 None:intergenic 40.0%
! AAGAGCAACAACTTTGGCTT+CGG + chr1_3:42294832-42294851 Msa0119000:CDS 40.0%
! TTTTCCAGTCCTATGAAGCA+TGG + chr1_3:42294929-42294948 Msa0119000:intron 40.0%
AATGGAGTCAAAATTGACGG+TGG + chr1_3:42295115-42295134 Msa0119000:CDS 40.0%
GAAACGGTAACCAAAAACCA+TGG - chr1_3:42295167-42295186 None:intergenic 40.0%
AACTTCAAAAGCAGGCAATG+TGG + chr1_3:42295283-42295302 Msa0119000:three_prime_UTR 40.0%
TGGAGAGAGGAAATACGATG+GGG + chr1_3:42285155-42285174 Msa0119000:CDS 45.0%
TTTCGAGAAAATCAAGCCGG+AGG + chr1_3:42285287-42285306 Msa0119000:CDS 45.0%
GTGAGTTCTTACTTCCTCCA+CGG - chr1_3:42285333-42285352 None:intergenic 45.0%
! ATATATGTGTGGTGGGGTTG+TGG + chr1_3:42286078-42286097 Msa0119000:intron 45.0%
! TATATGTGTGGTGGGGTTGT+GGG + chr1_3:42286079-42286098 Msa0119000:intron 45.0%
GTACAGTACCCCTATGCTAT+TGG + chr1_3:42286855-42286874 Msa0119000:intron 45.0%
GAGTGAGGACCCAAATTAAG+TGG - chr1_3:42286939-42286958 None:intergenic 45.0%
AACCTAGTGAGTGATGAGTG+AGG - chr1_3:42286954-42286973 None:intergenic 45.0%
GTTGTCGAGAAACACTTGTG+TGG + chr1_3:42286971-42286990 Msa0119000:intron 45.0%
ACACTCATCCTATTCGAGAG+TGG - chr1_3:42287177-42287196 None:intergenic 45.0%
TGAGGGGGACAAGAAAAGTT+AGG + chr1_3:42287256-42287275 Msa0119000:intron 45.0%
GAGGGGGACAAGAAAAGTTA+GGG + chr1_3:42287257-42287276 Msa0119000:intron 45.0%
GAAAAAGACTAAGGCCCAAC+AGG + chr1_3:42287987-42288006 Msa0119000:intron 45.0%
AGTTAGAGGTTGTTGGATGG+TGG - chr1_3:42288460-42288479 None:intergenic 45.0%
GAACAAGTTCTCAAGAGGAG+TGG - chr1_3:42288597-42288616 None:intergenic 45.0%
AGGAGATTGACCAAGACAAG+TGG - chr1_3:42289758-42289777 None:intergenic 45.0%
ACCGTGATGTTTATGAGACG+AGG - chr1_3:42289778-42289797 None:intergenic 45.0%
! AGTCTAGAACTCTAGCTCCA+AGG + chr1_3:42289835-42289854 Msa0119000:intron 45.0%
! GTCTAGAACTCTAGCTCCAA+GGG + chr1_3:42289836-42289855 Msa0119000:intron 45.0%
! CTTGTGGGTCTTTAGCTTAG+TGG + chr1_3:42290134-42290153 Msa0119000:intron 45.0%
CTCAAACAAACATGTGGTGG+TGG - chr1_3:42290755-42290774 None:intergenic 45.0%
AACTATGTCTGTTGCAGCTG+AGG + chr1_3:42290879-42290898 Msa0119000:intron 45.0%
AGGATATTGAAGCCGGAACA+AGG + chr1_3:42290899-42290918 Msa0119000:CDS 45.0%
GGATATTGAAGCCGGAACAA+GGG + chr1_3:42290900-42290919 Msa0119000:CDS 45.0%
CTTTATCCTTGCCCTTGTTC+CGG - chr1_3:42290914-42290933 None:intergenic 45.0%
AACACGGCGAAAGTAGAACA+TGG + chr1_3:42291150-42291169 Msa0119000:intron 45.0%
TGATGACAGATCCTGACTGA+GGG - chr1_3:42291390-42291409 None:intergenic 45.0%
! TTGATGACAGATCCTGACTG+AGG - chr1_3:42291391-42291410 None:intergenic 45.0%
GACACATATTGTGAGACGGA+GGG - chr1_3:42291432-42291451 None:intergenic 45.0%
TGACACATATTGTGAGACGG+AGG - chr1_3:42291433-42291452 None:intergenic 45.0%
GTTCACTGATGTGACCTACA+AGG + chr1_3:42291534-42291553 Msa0119000:intron 45.0%
GCCTTTGAGTACTACCTTGT+AGG - chr1_3:42291551-42291570 None:intergenic 45.0%
! CAAAGGCATGACATCAAGTG+AGG + chr1_3:42291564-42291583 Msa0119000:CDS 45.0%
CATGACATCAAGTGAGGAGA+AGG + chr1_3:42291570-42291589 Msa0119000:CDS 45.0%
CTTGTCTTTCCACTTCCTGA+GGG - chr1_3:42291655-42291674 None:intergenic 45.0%
ACTTGTCTTTCCACTTCCTG+AGG - chr1_3:42291656-42291675 None:intergenic 45.0%
GTGATAGAACCACCAACTGT+GGG - chr1_3:42291712-42291731 None:intergenic 45.0%
AGTGATAGAACCACCAACTG+TGG - chr1_3:42291713-42291732 None:intergenic 45.0%
! TCATTTGTTCGCGGAGTATC+CGG + chr1_3:42292236-42292255 Msa0119000:CDS 45.0%
TAATTCTTCGCTTTGCGGCA+TGG + chr1_3:42292646-42292665 Msa0119000:intron 45.0%
GCAAACTTCCTTTCCCAAGA+AGG - chr1_3:42292779-42292798 None:intergenic 45.0%
GCGGTGAACATCCTATAGAT+TGG - chr1_3:42292839-42292858 None:intergenic 45.0%
CAAAAACTCCGCTGGATTCA+TGG - chr1_3:42292868-42292887 None:intergenic 45.0%
! TGTTTCTGTACCGTCGGAAT+TGG + chr1_3:42292917-42292936 Msa0119000:CDS 45.0%
CAATCGACATGTGTCTGTGT+CGG + chr1_3:42293066-42293085 Msa0119000:intron 45.0%
!! GCGTCTCACTTTTAGTGTTG+CGG + chr1_3:42293167-42293186 Msa0119000:intron 45.0%
AGAATCACAAACACTGGTCG+CGG - chr1_3:42293291-42293310 None:intergenic 45.0%
! GGCATATGAATCTCGAGTTG+CGG + chr1_3:42293747-42293766 Msa0119000:CDS 45.0%
AAAGAGAATGGGGAGCAAGA+TGG + chr1_3:42293842-42293861 Msa0119000:CDS 45.0%
AAGAGAATGGGGAGCAAGAT+GGG + chr1_3:42293843-42293862 Msa0119000:CDS 45.0%
TCTGGAGAGGAATCAAGGAA+AGG + chr1_3:42293887-42293906 Msa0119000:CDS 45.0%
!!! GGAGGCATGACTATTTTAGC+TGG + chr1_3:42293908-42293927 Msa0119000:CDS 45.0%
TCATCTTAGGGTTACTCTGG+TGG + chr1_3:42293962-42293981 Msa0119000:CDS 45.0%
CCCAAAAGATCTGCAAGATC+AGG + chr1_3:42294002-42294021 Msa0119000:CDS 45.0%
GTTCGACCGAAAATCCATAG+TGG + chr1_3:42294039-42294058 Msa0119000:intron 45.0%
ACCGGCAATATCAGGTCTAA+TGG - chr1_3:42294402-42294421 None:intergenic 45.0%
!! GAAAAAGCACCGGCAATATC+AGG - chr1_3:42294410-42294429 None:intergenic 45.0%
AACCGGCCTTTATAACGGTT+TGG + chr1_3:42294620-42294639 Msa0119000:intron 45.0%
! ATCCTGGTTCGAGCAGTTTA+AGG + chr1_3:42294670-42294689 Msa0119000:intron 45.0%
GCAGTTGAACAACGACCTAA+AGG + chr1_3:42294692-42294711 Msa0119000:intron 45.0%
ACCTAAAGGTCTCGCAGATT+TGG + chr1_3:42294706-42294725 Msa0119000:intron 45.0%
ACCAAATCTGCGAGACCTTT+AGG - chr1_3:42294710-42294729 None:intergenic 45.0%
CTTACAGTGCTAACAATGGC+TGG + chr1_3:42294757-42294776 Msa0119000:intron 45.0%
AACTGTGATGACCTTCATGC+TGG + chr1_3:42294856-42294875 Msa0119000:CDS 45.0%
AGTAGTTGCTCTGATTGCCA+TGG + chr1_3:42295147-42295166 Msa0119000:CDS 45.0%
! GCTCTGATTGCCATGGTTTT+TGG + chr1_3:42295154-42295173 Msa0119000:CDS 45.0%
! TGTTGGGCAGTAATGGAGAG+AGG + chr1_3:42285142-42285161 Msa0119000:intron 50.0%
TAGGACCCAATCAGATCAGC+TGG + chr1_3:42285183-42285202 Msa0119000:CDS 50.0%
GTCGAGTGATCACTCAACTG+TGG - chr1_3:42285238-42285257 None:intergenic 50.0%
TCACTCGACAAACGGAGCAT+TGG + chr1_3:42285249-42285268 Msa0119000:CDS 50.0%
!! AACGGAGCATTGGAAGAGAG+TGG + chr1_3:42285259-42285278 Msa0119000:CDS 50.0%
CCAGCTTGGGTCTCTCATTT+GGG + chr1_3:42285437-42285456 Msa0119000:CDS 50.0%
! GGTCTCTCATTTGGGTTCAC+TGG + chr1_3:42285445-42285464 Msa0119000:CDS 50.0%
AAGGTTCGGGGTTCAAACTC+TGG + chr1_3:42285667-42285686 Msa0119000:intron 50.0%
! ATATGTGTGGTGGGGTTGTG+GGG + chr1_3:42286080-42286099 Msa0119000:intron 50.0%
GTCCTCACTCATCACTCACT+AGG + chr1_3:42286949-42286968 Msa0119000:intron 50.0%
TTCGAGAGTGGAGACAACCT+AGG - chr1_3:42287165-42287184 None:intergenic 50.0%
GGTTGTCTCCACTCTCGAAT+AGG + chr1_3:42287166-42287185 Msa0119000:intron 50.0%
GACAGCAATCACCACTGTCT+TGG - chr1_3:42288799-42288818 None:intergenic 50.0%
AGACAGTGGTGATTGCTGTC+TGG + chr1_3:42288799-42288818 Msa0119000:intron 50.0%
ACATGACCACTAGGTGACTG+CGG - chr1_3:42289159-42289178 None:intergenic 50.0%
CAGTCACCTAGTGGTCATGT+TGG + chr1_3:42289159-42289178 Msa0119000:intron 50.0%
CACAAGTGGGAAGACAAGCA+TGG - chr1_3:42289801-42289820 None:intergenic 50.0%
ATTTACAAGGCCACCTTGGG+CGG + chr1_3:42290268-42290287 Msa0119000:intron 50.0%
GCAGCTGAGGATATTGAAGC+CGG + chr1_3:42290892-42290911 Msa0119000:intron 50.0%
GTTTGAGCCATGGCAGAACT+AGG - chr1_3:42291050-42291069 None:intergenic 50.0%
CTTGCCTGCTCTAACACACA+GGG - chr1_3:42291100-42291119 None:intergenic 50.0%
ATCAAGTTCGTCCCTCAGTC+AGG + chr1_3:42291376-42291395 Msa0119000:intron 50.0%
GAGACGGAGGGAGTAATATC+AGG - chr1_3:42291420-42291439 None:intergenic 50.0%
! GCTGGCTTATTCTTCCTCCA+AGG - chr1_3:42291690-42291709 None:intergenic 50.0%
AGAATAAGCCAGCCCACAGT+TGG + chr1_3:42291697-42291716 Msa0119000:CDS 50.0%
AACTCTCTTCCTCTCTCCAC+CGG - chr1_3:42292258-42292277 None:intergenic 50.0%
GATGCTGCAAGACATAGCAG+AGG + chr1_3:42292373-42292392 Msa0119000:CDS 50.0%
AGGTCTAGCAAAAACTCCGC+TGG - chr1_3:42292876-42292895 None:intergenic 50.0%
TTCTGTACCGTCGGAATTGG+AGG + chr1_3:42292920-42292939 Msa0119000:CDS 50.0%
TGGTTTCGTGTCAGTGACAC+TGG - chr1_3:42293193-42293212 None:intergenic 50.0%
GGAGAGGAATCAAGGAAAGG+AGG + chr1_3:42293890-42293909 Msa0119000:CDS 50.0%
TGCCTTAAACTGCTCGAACC+AGG - chr1_3:42294675-42294694 None:intergenic 50.0%
! ACAATGGCTGGTTGTGAAGC+AGG + chr1_3:42294769-42294788 Msa0119000:intron 50.0%
! CAATGGCTGGTTGTGAAGCA+GGG + chr1_3:42294770-42294789 Msa0119000:intron 50.0%
AAATCCTCCAGCCAGCATGA+AGG - chr1_3:42294870-42294889 None:intergenic 50.0%
AGCTCCATGCTTCATAGGAC+TGG - chr1_3:42294936-42294955 None:intergenic 50.0%
GTCGAAGCTCCATGCTTCAT+AGG - chr1_3:42294941-42294960 None:intergenic 50.0%
TGAAGCATGGAGCTTCGACA+CGG + chr1_3:42294942-42294961 Msa0119000:intron 50.0%
ACTAGTCGACGCATCAGTAC+CGG + chr1_3:42295431-42295450 Msa0119000:three_prime_UTR 50.0%
GACCCAATCAGATCAGCTGG+CGG + chr1_3:42285186-42285205 Msa0119000:CDS 55.0%
CTCCGCCAGCTGATCTGATT+GGG - chr1_3:42285191-42285210 None:intergenic 55.0%
ACTCCGCCAGCTGATCTGAT+TGG - chr1_3:42285192-42285211 None:intergenic 55.0%
TTCTTACTTCCTCCACGGCC+CGG - chr1_3:42285328-42285347 None:intergenic 55.0%
TCGTGCTTCAAGTGCCAGCT+TGG + chr1_3:42285423-42285442 Msa0119000:CDS 55.0%
CGTGCTTCAAGTGCCAGCTT+GGG + chr1_3:42285424-42285443 Msa0119000:CDS 55.0%
GCCAGCTTGGGTCTCTCATT+TGG + chr1_3:42285436-42285455 Msa0119000:CDS 55.0%
CCCAAATGAGAGACCCAAGC+TGG - chr1_3:42285440-42285459 None:intergenic 55.0%
! CCATAGGGGCACGAAGCATA+AGG - chr1_3:42286048-42286067 None:intergenic 55.0%
CCTTATGCTTCGTGCCCCTA+TGG + chr1_3:42286045-42286064 Msa0119000:intron 55.0%
!! TGGTTGACTTGGGCCCTGTT+GGG - chr1_3:42288004-42288023 None:intergenic 55.0%
!! TTGGTTGACTTGGGCCCTGT+TGG - chr1_3:42288005-42288024 None:intergenic 55.0%
CCACTGTCTTGGTCATGTGC+TGG - chr1_3:42288788-42288807 None:intergenic 55.0%
CCAGCACATGACCAAGACAG+TGG + chr1_3:42288785-42288804 Msa0119000:intron 55.0%
AGGGGGACAACTTGTCAGCT+AGG - chr1_3:42290562-42290581 None:intergenic 55.0%
TTGAAGCCGGAACAAGGGCA+AGG + chr1_3:42290905-42290924 Msa0119000:CDS 55.0%
CCTTGCCTGCTCTAACACAC+AGG - chr1_3:42291101-42291120 None:intergenic 55.0%
CCTGTGTGTTAGAGCAGGCA+AGG + chr1_3:42291098-42291117 Msa0119000:intron 55.0%
!! TTGGCATTGATGGGTCCCTC+AGG + chr1_3:42291637-42291656 Msa0119000:CDS 55.0%
! TTGATGGGTCCCTCAGGAAG+TGG + chr1_3:42291643-42291662 Msa0119000:CDS 55.0%
ATAAGCCAGCCCACAGTTGG+TGG + chr1_3:42291700-42291719 Msa0119000:CDS 55.0%
TAGAACCACCAACTGTGGGC+TGG - chr1_3:42291708-42291727 None:intergenic 55.0%
! TTTGTTCGCGGAGTATCCGG+TGG + chr1_3:42292239-42292258 Msa0119000:CDS 55.0%
TCATGGACAGCTGCTGGTGA+TGG - chr1_3:42292987-42293006 None:intergenic 55.0%
ATCACCAGCAGCTGTCCATG+AGG + chr1_3:42292986-42293005 Msa0119000:CDS 55.0%
GTTACCTCATGGACAGCTGC+TGG - chr1_3:42292993-42293012 None:intergenic 55.0%
TGGAAGGTCGCTCGTTGTTC+TGG - chr1_3:42294382-42294401 None:intergenic 55.0%
CCTGAGCTGCAATGATGCAG+AGG - chr1_3:42294506-42294525 None:intergenic 55.0%
CCTCTGCATCATTGCAGCTC+AGG + chr1_3:42294503-42294522 Msa0119000:CDS 55.0%
CTGGTTGTGAAGCAGGGTCT+TGG + chr1_3:42294776-42294795 Msa0119000:intron 55.0%
CAGGGTCTTGGACTTGCCAT+CGG + chr1_3:42294788-42294807 Msa0119000:intron 55.0%
!! TGCCATCGGTGCTACGCTTA+TGG + chr1_3:42294802-42294821 Msa0119000:CDS 55.0%
! GTCCATAAGCGTAGCACCGA+TGG - chr1_3:42294807-42294826 None:intergenic 55.0%
GTGATGACCTTCATGCTGGC+TGG + chr1_3:42294860-42294879 Msa0119000:CDS 55.0%
! ATGACCTTCATGCTGGCTGG+AGG + chr1_3:42294863-42294882 Msa0119000:CDS 55.0%
! GGCTGGAGGATTTTTCGTCC+AGG + chr1_3:42294877-42294896 Msa0119000:CDS 55.0%
ATGGAGCTTCGACACGGACA+CGG + chr1_3:42294948-42294967 Msa0119000:intron 55.0%
CTAGTCGACGCATCAGTACC+GGG + chr1_3:42295432-42295451 Msa0119000:three_prime_UTR 55.0%
AGATCAGCTGGCGGAGTCGA+TGG + chr1_3:42285195-42285214 Msa0119000:CDS 60.0%
CCAGCTGAGCTAAGCTCACG+AGG - chr1_3:42285622-42285641 None:intergenic 60.0%
CCTCGTGAGCTTAGCTCAGC+TGG + chr1_3:42285619-42285638 Msa0119000:intron 60.0%
TGACCACTAGGTGACTGCGG+AGG - chr1_3:42289156-42289175 None:intergenic 60.0%
GTGGCCCTGTGTGTTAGAGC+AGG + chr1_3:42291093-42291112 Msa0119000:intron 60.0%
! TGTCTGTGTCGGTCACCGAC+AGG + chr1_3:42293077-42293096 Msa0119000:intron 60.0%
TCAGCTGGCGGAGTCGATGG+TGG + chr1_3:42285198-42285217 Msa0119000:CDS 65.0%
GCGACGCAGCCGTTATCCTC+CGG - chr1_3:42285306-42285325 None:intergenic 65.0%
! GAGGATAACGGCTGCGTCGC+CGG + chr1_3:42285306-42285325 Msa0119000:CDS 65.0%
! AGGATAACGGCTGCGTCGCC+GGG + chr1_3:42285307-42285326 Msa0119000:CDS 65.0%
! GTGTGGTGGGGTTGTGGGGT+TGG + chr1_3:42286084-42286103 Msa0119000:intron 65.0%
! GGTGGGGTTGTGGGGTTGGT+TGG + chr1_3:42286088-42286107 Msa0119000:intron 65.0%
!! GGGGTTGTGGGGTTGGTTGG+TGG + chr1_3:42286091-42286110 Msa0119000:intron 65.0%
GGTCCTCCGCAGTCACCTAG+TGG + chr1_3:42289150-42289169 Msa0119000:intron 65.0%
! GCGGAGTATCCGGTGGAGAG+AGG + chr1_3:42292246-42292265 Msa0119000:CDS 65.0%
! GCTGGCGGAGTCGATGGTGG+CGG + chr1_3:42285201-42285220 Msa0119000:CDS 70.0%
! ACGGCTGCGTCGCCGGGCCG+TGG + chr1_3:42285313-42285332 Msa0119000:CDS 85.0%
! GCTGCGTCGCCGGGCCGTGG+AGG + chr1_3:42285316-42285335 Msa0119000:CDS 85.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 42284619 42295700 42284619 ID=Msa0119000;Name=Msa0119000
chr1_3 mRNA 42284619 42295700 42284619 ID=Msa0119000-mRNA-1;Parent=Msa0119000;Name=Msa0119000-mRNA-1;_AED=0.06;_eAED=0.06;_QI=97|1|1|1|0.9|0.81|11|475|740
chr1_3 exon 42284619 42284713 42284619 ID=Msa0119000-mRNA-1:exon:12803;Parent=Msa0119000-mRNA-1
chr1_3 exon 42285152 42285529 42285152 ID=Msa0119000-mRNA-1:exon:12804;Parent=Msa0119000-mRNA-1
chr1_3 exon 42290896 42290969 42290896 ID=Msa0119000-mRNA-1:exon:12805;Parent=Msa0119000-mRNA-1
chr1_3 exon 42291535 42291770 42291535 ID=Msa0119000-mRNA-1:exon:12806;Parent=Msa0119000-mRNA-1
chr1_3 exon 42291954 42292109 42291954 ID=Msa0119000-mRNA-1:exon:12807;Parent=Msa0119000-mRNA-1
chr1_3 exon 42292211 42292394 42292211 ID=Msa0119000-mRNA-1:exon:12808;Parent=Msa0119000-mRNA-1
chr1_3 exon 42292705 42293007 42292705 ID=Msa0119000-mRNA-1:exon:12809;Parent=Msa0119000-mRNA-1
chr1_3 exon 42293736 42294023 42293736 ID=Msa0119000-mRNA-1:exon:12810;Parent=Msa0119000-mRNA-1
chr1_3 exon 42294240 42294524 42294240 ID=Msa0119000-mRNA-1:exon:12811;Parent=Msa0119000-mRNA-1
chr1_3 exon 42294791 42294898 42294791 ID=Msa0119000-mRNA-1:exon:12812;Parent=Msa0119000-mRNA-1
chr1_3 exon 42295013 42295700 42295013 ID=Msa0119000-mRNA-1:exon:12813;Parent=Msa0119000-mRNA-1
chr1_3 five_prime_UTR 42284619 42284713 42284619 ID=Msa0119000-mRNA-1:five_prime_utr;Parent=Msa0119000-mRNA-1
chr1_3 five_prime_UTR 42285152 42285153 42285152 ID=Msa0119000-mRNA-1:five_prime_utr;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42285154 42285529 42285154 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42290896 42290969 42290896 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42291535 42291770 42291535 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42291954 42292109 42291954 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42292211 42292394 42292211 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42292705 42293007 42292705 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42293736 42294023 42293736 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42294240 42294524 42294240 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42294791 42294898 42294791 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 CDS 42295013 42295225 42295013 ID=Msa0119000-mRNA-1:cds;Parent=Msa0119000-mRNA-1
chr1_3 three_prime_UTR 42295226 42295700 42295226 ID=Msa0119000-mRNA-1:three_prime_utr;Parent=Msa0119000-mRNA-1
Gene Sequence

>Msa0119000

ATGGAGAGAGGAAATACGATGGGGATATCTAGGACCCAATCAGATCAGCTGGCGGAGTCGATGGTGGCGGCTCTAAAGTCGCCACAGTTGAGTGATCACTCGACAAACGGAGCATTGGAAGAGAGTGGAAGACTTTCGAGAAAATCAAGCCGGAGGATAACGGCTGCGTCGCCGGGCCGTGGAGGAAGTAAGAACTCACACATAAGGAAAACAAGAAGTGCTCAATTGAAGATTGATTTTGATGAGTTGGGTAGTGGTGCTGCTCTTAGTCGTGCTTCAAGTGCCAGCTTGGGTCTCTCATTTGGGTTCACTGGCTTCACTATGCCTCCTGATCAAATTGCTGATACCAGACCATTTAGTGATGATGATATGATTCCTGAGGATATTGAAGCCGGAACAAGGGCAAGGATAAAGTTTCAAACTGAACCTACTGAACCTATATCTCTAAAGTTCACTGATGTGACCTACAAGGTAGTACTCAAAGGCATGACATCAAGTGAGGAGAAGGATATCTTGAATGGGATAAGTGGTTCTGTAAATCCAGGTGAAGTTTTGGCATTGATGGGTCCCTCAGGAAGTGGAAAGACAAGTCTTTTAAATCTCCTTGGAGGAAGAATAAGCCAGCCCACAGTTGGTGGTTCTATCACTTACAATGACCAATTATATTCCAAGTTTCTCAAAAGCAGGATAGGATTTGTGACACAAGATGATGTTTTGTTTCCTCACCTAACTGTGAAAGAAACATTAACATACGCGGCTCGGTTAAGACTTCCAAAGACATTAACTAAGGAGCAAAAGGAACAAAGAGCTTTAGATGTCATCTATGAACTTGGCTTAGAAAGGTGCCAAGATACTATGATTGGAGGTTCATTTGTTCGCGGAGTATCCGGTGGAGAGAGGAAGAGAGTTTGTATTGGCAATGAGATTATAATCAATCCTTCCATTCTGTTTCTTGATGAACCAACATCTGGTTTGGATTCAACAACCGCTTTGAAGATCGTTCAGATGCTGCAAGACATAGCAGAGGCTGGAAAAACAGTAGTGACAACAATTCACCAACCATCAAGTAGACTGTTTCACAAATTTGACAAGTTGATCCTTCTTGGGAAAGGAAGTTTGCTTTACTTTGGAAAAGCATCAGAATCAATGGATTACTTCCAATCTATAGGATGTTCACCGCTTATTTCCATGAATCCAGCGGAGTTTTTGCTAGACCTTGCTAATGGAAATATAAATGATGTTTCTGTACCGTCGGAATTGGAGGATAAAGTTGGAAATGCAGCAGTTGAAACATATAATGGAAAACCATCACCAGCAGCTGTCCATGAGTATCTAGTGGAGGCATATGAATCTCGAGTTGCGGAAACCGAGAAGAAAAAAATAATGGTTTCTGTACCTCTAGATGAAGATTTGAAGGCCAAAGTGGTTTCTGCTAAAAGAGAATGGGGAGCAAGATGGGATGAGCAATTTTCCATACTTTTCTGGAGAGGAATCAAGGAAAGGAGGCATGACTATTTTAGCTGGTTAAGAATCACACAAGTTTTATCCACTGCAATCATCTTAGGGTTACTCTGGTGGCAATCCGATGCTAAGAACCCAAAAGATCTGCAAGATCAGGCAGGACTGCTTTTCTTTATTGCGGTGTTCTGGGGATTCTTTCCTGTTTTTACAGCAATATTTACATTTCCTCAAGAAAGAGCCATGTTAAATAAGGAACGCGCAGCAGATATGTACAGATTAAGCGCATACTTTCTTGCCAGAACAACGAGCGACCTTCCATTAGACCTGATATTGCCGGTGCTTTTTCTCCTAGTTGTTTACTTCATGGCTGGTCTAAGACTAAGTGCTGCTCCCTTTTTCCTCACCATTCTTACTGTTTTCCTCTGCATCATTGCAGCTCAGGGTCTTGGACTTGCCATCGGTGCTACGCTTATGGACTTAAAAAGAGCAACAACTTTGGCTTCGGTAACTGTGATGACCTTCATGCTGGCTGGAGGATTTTTCGTCCAGAAAGTCCCAATTTTCATTTCTTGGATCCGCTACATGTCTTTCAATTACCACACTTACAAACTATTGCTCAAAGTGCAATACGAACATCTCACACCTATTGTAAATGGAGTCAAAATTGACGGTGGTTTGACAGAAGTAGTTGCTCTGATTGCCATGGTTTTTGGTTACCGTTTCTTAGCATATCTTTCGTTGCGGAGAATGAAACTTCAATAG
Protein sequence

>Msa0119000

MERGNTMGISRTQSDQLAESMVAALKSPQLSDHSTNGALEESGRLSRKSSRRITAASPGRGGSKNSHIRKTRSAQLKIDFDELGSGAALSRASSASLGLSFGFTGFTMPPDQIADTRPFSDDDMIPEDIEAGTRARIKFQTEPTEPISLKFTDVTYKVVLKGMTSSEEKDILNGISGSVNPGEVLALMGPSGSGKTSLLNLLGGRISQPTVGGSITYNDQLYSKFLKSRIGFVTQDDVLFPHLTVKETLTYAARLRLPKTLTKEQKEQRALDVIYELGLERCQDTMIGGSFVRGVSGGERKRVCIGNEIIINPSILFLDEPTSGLDSTTALKIVQMLQDIAEAGKTVVTTIHQPSSRLFHKFDKLILLGKGSLLYFGKASESMDYFQSIGCSPLISMNPAEFLLDLANGNINDVSVPSELEDKVGNAAVETYNGKPSPAAVHEYLVEAYESRVAETEKKKIMVSVPLDEDLKAKVVSAKREWGARWDEQFSILFWRGIKERRHDYFSWLRITQVLSTAIILGLLWWQSDAKNPKDLQDQAGLLFFIAVFWGFFPVFTAIFTFPQERAMLNKERAADMYRLSAYFLARTTSDLPLDLILPVLFLLVVYFMAGLRLSAAPFFLTILTVFLCIIAAQGLGLAIGATLMDLKRATTLASVTVMTFMLAGGFFVQKVPIFISWIRYMSFNYHTYKLLLKVQYEHLTPIVNGVKIDGGLTEVVALIAMVFGYRFLAYLSLRRMKLQ*