AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0420080


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0420080 MtrunA17_Chr3g0118771 92.958 497 32 1 1 497 1 494 0.0 969
Msa0420080 MtrunA17_Chr3g0118691 81.781 483 87 1 16 497 6 488 0.0 847
Msa0420080 MtrunA17_Chr3g0118711 81.497 481 89 0 16 496 5 485 0.0 845
Msa0420080 MtrunA17_Chr3g0118751 85.535 477 40 2 21 497 3 450 0.0 841
Msa0420080 MtrunA17_Chr3g0118671 80.882 476 91 0 21 496 3 478 0.0 830
Msa0420080 MtrunA17_Chr3g0118701 79.917 483 96 1 16 497 6 488 0.0 830
Msa0420080 MtrunA17_Chr3g0118661 66.458 480 160 1 18 497 7 485 0.0 650
Msa0420080 MtrunA17_Chr5g0426431 55.202 471 205 5 24 492 12 478 0.0 550
Msa0420080 MtrunA17_Chr3g0092641 54.237 472 210 5 23 492 11 478 0.0 541
Msa0420080 MtrunA17_Chr3g0118721 83.729 295 48 0 203 497 1 295 0.0 533
Msa0420080 MtrunA17_Chr3g0078841 50.418 478 233 3 17 492 3 478 1.33e-180 515
Msa0420080 MtrunA17_Chr6g0454341 49.582 478 237 3 17 492 3 478 3.41e-178 509
Msa0420080 MtrunA17_Chr6g0454191 50.415 482 230 5 17 492 3 481 6.75e-178 508
Msa0420080 MtrunA17_Chr2g0278711 50.630 476 227 5 20 492 7 477 5.26e-177 506
Msa0420080 MtrunA17_Chr6g0454331 51.046 478 224 4 22 492 5 479 3.19e-175 501
Msa0420080 MtrunA17_Chr6g0454401 50.104 479 230 4 20 492 6 481 2.25e-172 494
Msa0420080 MtrunA17_Chr8g0336331 50.000 478 234 4 17 492 3 477 2.97e-172 494
Msa0420080 MtrunA17_Chr6g0454321 48.643 479 239 4 17 493 3 476 9.05e-172 499
Msa0420080 MtrunA17_Chr6g0454321 46.853 143 67 3 17 150 493 635 2.06e-29 122
Msa0420080 MtrunA17_Chr4g0050341 48.057 489 250 2 7 491 2 490 1.97e-171 492
Msa0420080 MtrunA17_Chr6g0453951 49.375 480 235 4 18 492 51 527 6.05e-171 492
Msa0420080 MtrunA17_Chr6g0454301 50.418 478 233 3 17 492 256 731 3.78e-170 497
Msa0420080 MtrunA17_Chr6g0454301 54.585 229 101 2 262 490 3 228 1.83e-84 275
Msa0420080 MtrunA17_Chr6g0454201 52.521 476 218 5 22 492 9 481 3.19e-169 486
Msa0420080 MtrunA17_Chr6g0454181 47.609 481 244 4 17 492 3 480 1.48e-168 484
Msa0420080 MtrunA17_Chr6g0454211 50.734 477 227 4 21 492 294 767 2.24e-167 491
Msa0420080 MtrunA17_Chr6g0454211 33.714 350 147 4 142 491 3 267 2.51e-56 200
Msa0420080 MtrunA17_Chr6g0454361 50.000 476 230 4 22 492 9 481 1.36e-166 479
Msa0420080 MtrunA17_Chr6g0453961 48.367 490 244 5 9 492 4 490 4.51e-166 478
Msa0420080 MtrunA17_Chr6g0454291 50.105 477 230 4 21 492 4 477 6.32e-165 475
Msa0420080 MtrunA17_Chr8g0359821 47.599 479 245 3 17 492 3 478 1.60e-164 474
Msa0420080 MtrunA17_Chr6g0454351 47.917 480 225 5 18 492 6 465 6.11e-163 469
Msa0420080 MtrunA17_Chr6g0452771 48.025 481 242 4 17 492 3 480 2.33e-157 456
Msa0420080 MtrunA17_Chr6g0454151 47.521 484 244 5 17 495 3 481 1.94e-156 453
Msa0420080 MtrunA17_Chr6g0454261 46.778 481 248 4 17 492 3 480 1.22e-155 451
Msa0420080 MtrunA17_Chr6g0454141 45.738 481 253 4 17 492 3 480 6.83e-154 447
Msa0420080 MtrunA17_Chr6g0454121 46.250 480 251 4 17 492 3 479 1.82e-152 443
Msa0420080 MtrunA17_Chr6g0454131 45.625 480 254 4 17 492 3 479 1.28e-149 436
Msa0420080 MtrunA17_Chr7g0217881 46.331 477 230 5 21 492 7 462 5.62e-149 434
Msa0420080 MtrunA17_Chr5g0423981 46.122 477 212 7 22 492 8 445 7.59e-145 422
Msa0420080 MtrunA17_Chr6g0454251 47.089 395 201 4 21 410 4 395 4.23e-134 393
Msa0420080 MtrunA17_Chr5g0426401 51.923 312 143 5 184 492 4 311 4.09e-113 337
Msa0420080 MtrunA17_Chr6g0454271 52.069 290 136 2 203 492 1 287 4.27e-106 318
Msa0420080 MtrunA17_Chr8g0355011 39.646 396 189 5 102 492 12 362 1.34e-99 304
Msa0420080 MtrunA17_Chr5g0412131 35.062 482 273 11 23 489 11 467 2.90e-91 286
Msa0420080 MtrunA17_Chr3g0112771 34.746 472 272 10 25 492 13 452 1.93e-89 281
Msa0420080 MtrunA17_Chr6g0454221 54.506 233 104 2 262 494 3 233 2.15e-88 273
Msa0420080 MtrunA17_Chr6g0454171 40.774 336 148 5 161 492 22 310 3.16e-88 273
Msa0420080 MtrunA17_Chr5g0412111 33.471 484 281 11 21 489 2 459 7.78e-87 274
Msa0420080 MtrunA17_Chr5g0412101 34.232 482 278 10 23 489 11 468 8.65e-86 272
Msa0420080 MtrunA17_Chr3g0112761 34.958 472 275 11 24 492 8 450 2.24e-85 270
Msa0420080 MtrunA17_Chr4g0032331 32.851 484 281 12 22 496 6 454 5.73e-76 246
Msa0420080 MtrunA17_Chr5g0414331 32.238 487 273 12 24 495 13 457 4.17e-74 241
Msa0420080 MtrunA17_Chr7g0249981 30.675 489 291 12 20 497 21 472 8.44e-73 238
Msa0420080 MtrunA17_Chr5g0414321 31.837 490 285 13 17 495 4 455 3.43e-72 236
Msa0420080 MtrunA17_Chr6g0464921 30.913 482 294 10 18 491 5 455 2.02e-71 234
Msa0420080 MtrunA17_Chr6g0464881 30.738 488 284 11 20 492 7 455 4.07e-71 233
Msa0420080 MtrunA17_Chr7g0250001 29.412 476 302 8 22 493 4 449 6.49e-71 233
Msa0420080 MtrunA17_Chr8g0336271 46.502 243 127 2 17 257 3 244 7.18e-70 224
Msa0420080 MtrunA17_Chr3g0118731 92.727 110 8 0 76 185 28 137 6.62e-69 218
Msa0420080 MtrunA17_Chr8g0365811 31.325 498 286 16 5 480 483 946 5.66e-68 235
Msa0420080 MtrunA17_Chr8g0365811 28.903 474 285 14 19 466 3 450 1.38e-55 200
Msa0420080 MtrunA17_Chr3g0098111 28.776 490 319 11 20 497 4 475 3.03e-67 224
Msa0420080 MtrunA17_Chr7g0218831 31.423 471 279 12 23 488 5 436 5.72e-67 222
Msa0420080 MtrunA17_Chr7g0218811 29.936 471 287 12 23 488 14 446 1.11e-66 221
Msa0420080 MtrunA17_Chr7g0218821 30.335 478 287 13 23 488 4 447 1.56e-66 221
Msa0420080 MtrunA17_Chr6g0464871 30.689 479 292 11 24 494 23 469 1.99e-66 221
Msa0420080 MtrunA17_Chr7g0218841 31.780 472 277 14 23 488 5 437 2.04e-66 220
Msa0420080 MtrunA17_Chr1g0207861 30.833 480 301 12 24 491 8 468 9.99e-66 220
Msa0420080 MtrunA17_Chr6g0464841 31.106 479 284 12 24 491 11 454 1.27e-65 219
Msa0420080 MtrunA17_Chr7g0218791 30.705 482 281 15 23 490 4 446 1.47e-65 218
Msa0420080 MtrunA17_Chr1g0207971 29.106 481 299 12 24 494 8 456 1.65e-64 216
Msa0420080 MtrunA17_Chr1g0161351 29.600 500 314 13 9 491 19 497 4.94e-64 216
Msa0420080 MtrunA17_Chr6g0454371 54.651 172 77 1 321 492 1 171 1.89e-63 204
Msa0420080 MtrunA17_Chr1g0207981 30.290 482 302 10 24 492 13 473 2.54e-63 213
Msa0420080 MtrunA17_Chr6g0464861 31.172 478 286 11 23 491 10 453 7.70e-63 211
Msa0420080 MtrunA17_Chr6g0454231 44.828 232 126 1 20 249 246 477 3.28e-62 210
Msa0420080 MtrunA17_Chr6g0454231 42.188 256 106 4 238 492 5 219 1.30e-58 201
Msa0420080 MtrunA17_Chr4g0044511 30.339 501 294 14 17 491 33 504 4.26e-62 211
Msa0420080 MtrunA17_Chr5g0426411 56.707 164 70 1 21 183 9 172 1.09e-61 199
Msa0420080 MtrunA17_Chr1g0207951 29.741 501 308 13 3 494 108 573 1.13e-61 218
Msa0420080 MtrunA17_Chr1g0207951 27.713 516 316 15 2 497 636 1114 1.81e-57 206
Msa0420080 MtrunA17_Chr1g0207831 29.175 497 292 14 25 497 9 469 3.12e-60 205
Msa0420080 MtrunA17_Chr8g0377921 28.807 486 299 13 23 488 2 460 1.34e-58 200
Msa0420080 MtrunA17_Chr6g0453981 40.948 232 134 2 142 373 3 231 1.41e-58 193
Msa0420080 MtrunA17_Chr8g0380531 27.673 477 307 13 24 491 10 457 1.64e-57 197
Msa0420080 MtrunA17_Chr3g0121991 29.472 492 306 16 20 491 75 545 1.82e-57 199
Msa0420080 MtrunA17_Chr4g0053321 29.472 492 303 14 20 495 20 483 8.88e-57 196
Msa0420080 MtrunA17_Chr4g0053501 29.424 486 301 15 24 495 11 468 2.50e-56 195
Msa0420080 MtrunA17_Chr3g0122001 28.834 489 313 13 20 491 482 952 2.58e-56 202
Msa0420080 MtrunA17_Chr3g0122001 28.455 492 312 13 20 491 2 473 7.01e-55 197
Msa0420080 MtrunA17_Chr5g0401721 28.138 494 305 17 25 495 9 475 5.35e-56 194
Msa0420080 MtrunA17_Chr5g0393591 29.645 479 266 11 24 491 17 435 6.57e-56 193
Msa0420080 MtrunA17_Chr7g0243931 30.059 509 284 16 22 491 15 490 1.24e-55 193
Msa0420080 MtrunA17_Chr8g0336261 58.394 137 56 1 321 457 1 136 1.25e-55 182
Msa0420080 MtrunA17_Chr7g0249931 28.125 480 301 12 24 493 40 485 1.88e-55 192
Msa0420080 MtrunA17_Chr6g0453941 48.168 191 96 2 162 351 75 263 3.16e-55 186
Msa0420080 MtrunA17_Chr5g0431441 29.752 484 292 15 24 493 18 467 1.23e-54 190
Msa0420080 MtrunA17_Chr5g0431401 28.866 485 282 16 24 491 10 448 5.54e-54 187
Msa0420080 MtrunA17_Chr7g0275681 30.078 512 293 15 16 494 4 483 2.04e-53 187
Msa0420080 MtrunA17_Chr1g0207931 36.437 247 146 3 241 480 244 486 2.88e-53 187
Msa0420080 MtrunA17_Chr6g0454281 48.148 189 93 2 21 204 7 195 3.76e-53 178
Msa0420080 MtrunA17_Chr8g0377941 28.221 489 296 15 25 492 8 462 4.61e-53 186
Msa0420080 MtrunA17_Chr7g0265041 29.365 504 306 12 23 496 10 493 9.98e-53 186
Msa0420080 MtrunA17_Chr7g0243951 28.571 504 297 14 22 491 9 483 1.10e-52 185
Msa0420080 MtrunA17_Chr5g0431371 29.668 482 282 15 24 491 10 448 1.27e-52 184
Msa0420080 MtrunA17_Chr5g0431361 28.631 482 290 15 24 491 12 453 1.83e-52 184
Msa0420080 MtrunA17_Chr7g0243681 29.102 512 287 17 18 491 6 479 5.53e-52 183
Msa0420080 MtrunA17_Chr8g0366391 29.703 505 311 16 17 497 2 486 6.69e-52 183
Msa0420080 MtrunA17_Chr8g0373301 29.257 417 250 9 90 487 72 462 4.72e-51 180
Msa0420080 MtrunA17_Chr5g0440421 29.240 513 299 19 21 493 7 495 2.25e-50 179
Msa0420080 MtrunA17_Chr7g0243801 29.341 501 298 15 20 491 3 476 2.61e-50 179
Msa0420080 MtrunA17_Chr7g0243771 30.178 507 278 18 24 491 6 475 2.92e-50 179
Msa0420080 MtrunA17_Chr7g0243631 29.980 507 283 19 24 491 13 486 3.68e-50 179
Msa0420080 MtrunA17_Chr4g0072771 26.105 475 312 11 21 489 22 463 4.23e-50 177
Msa0420080 MtrunA17_Chr5g0431421 28.337 487 284 15 24 492 10 449 8.54e-50 176
Msa0420080 MtrunA17_Chr8g0336741 29.218 486 283 17 20 479 9 459 1.09e-49 177
Msa0420080 MtrunA17_Chr7g0243861 28.125 512 306 16 14 491 4 487 2.76e-49 176
Msa0420080 MtrunA17_Chr4g0060511 28.373 504 298 15 24 491 11 487 1.07e-48 175
Msa0420080 MtrunA17_Chr6g0462571 31.319 364 208 10 139 487 121 457 1.55e-48 174
Msa0420080 MtrunA17_Chr6g0449931 30.159 504 278 17 22 491 4 467 1.67e-48 174
Msa0420080 MtrunA17_Chr8g0339631 29.274 427 243 12 77 480 67 457 2.81e-48 173
Msa0420080 MtrunA17_Chr7g0232401 26.489 487 292 14 24 480 6 456 2.88e-48 173
Msa0420080 MtrunA17_Chr7g0243871 28.458 506 294 15 18 491 3 472 2.91e-48 173
Msa0420080 MtrunA17_Chr7g0249961 35.000 240 137 5 262 493 33 261 3.26e-48 167
Msa0420080 MtrunA17_Chr7g0265141 28.161 522 290 18 18 492 3 486 5.27e-48 172
Msa0420080 MtrunA17_Chr7g0232411 27.455 499 290 17 24 490 6 464 1.03e-47 171
Msa0420080 MtrunA17_Chr1g0153451 28.144 501 295 17 24 495 6 470 1.13e-47 171
Msa0420080 MtrunA17_Chr7g0232391 28.373 504 279 20 24 490 6 464 1.28e-47 171
Msa0420080 MtrunA17_Chr8g0374931 28.628 503 299 15 21 491 7 481 3.96e-47 170
Msa0420080 MtrunA17_Chr4g0014061 29.800 500 281 18 25 491 10 472 4.11e-47 170
Msa0420080 MtrunA17_Chr8g0336691 25.859 495 298 14 24 487 13 469 6.89e-47 175
Msa0420080 MtrunA17_Chr8g0336691 35.185 270 143 7 238 487 1118 1375 7.29e-47 175
Msa0420080 MtrunA17_Chr8g0336691 28.421 475 269 17 24 480 480 901 4.12e-43 164
Msa0420080 MtrunA17_Chr7g0243781 27.184 515 292 16 18 491 3 475 7.75e-47 169
Msa0420080 MtrunA17_Chr5g0448551 26.517 445 291 10 21 459 4 418 8.30e-47 169
Msa0420080 MtrunA17_Chr5g0419761 28.094 509 313 15 19 496 4 490 1.00e-46 169
Msa0420080 MtrunA17_Chr8g0335161 27.291 502 304 17 20 495 2 468 1.06e-46 169
Msa0420080 MtrunA17_Chr4g0044501 28.400 500 307 16 24 497 10 484 1.25e-46 169
Msa0420080 MtrunA17_Chr6g0486251 26.585 489 298 14 25 487 7 460 1.41e-46 168
Msa0420080 MtrunA17_Chr6g0486201 26.585 489 298 14 25 487 7 460 1.41e-46 168
Msa0420080 MtrunA17_Chr7g0232331 26.482 506 297 18 20 491 2 466 2.00e-46 168
Msa0420080 MtrunA17_Chr8g0335141 28.571 497 297 18 20 491 5 468 2.10e-46 168
Msa0420080 MtrunA17_Chr8g0336651 27.902 491 291 15 24 487 6 460 3.09e-46 173
Msa0420080 MtrunA17_Chr8g0336651 27.721 487 287 16 24 480 781 1232 1.04e-45 171
Msa0420080 MtrunA17_Chr8g0336651 31.008 258 138 5 238 487 545 770 8.56e-36 142
Msa0420080 MtrunA17_Chr6g0462521 27.088 491 291 13 22 489 2 448 4.37e-46 167
Msa0420080 MtrunA17_Chr4g0072761 25.847 472 308 11 24 489 15 450 5.18e-46 166
Msa0420080 MtrunA17_Chr6g0462531 27.551 490 286 15 22 480 2 453 5.36e-46 167
Msa0420080 MtrunA17_Chr5g0419771 27.146 501 312 13 24 493 36 514 9.96e-46 167
Msa0420080 MtrunA17_Chr5g0442561 27.219 507 303 16 21 494 2 475 1.25e-45 166
Msa0420080 MtrunA17_Chr7g0275511 28.921 491 290 15 23 487 14 471 1.58e-45 166
Msa0420080 MtrunA17_Chr6g0459311 27.016 496 295 17 21 487 10 467 2.08e-45 165
Msa0420080 MtrunA17_Chr8g0336731 30.504 377 221 10 130 488 134 487 2.41e-45 166
Msa0420080 MtrunA17_Chr6g0462541 30.366 382 222 8 122 487 106 459 2.90e-45 165
Msa0420080 MtrunA17_Chr7g0265101 28.628 503 317 15 20 495 3 490 4.70e-45 165
Msa0420080 MtrunA17_Chr3g0106231 27.291 491 279 15 24 492 18 452 1.11e-44 163
Msa0420080 MtrunA17_Chr1g0179901 27.559 508 302 19 24 493 16 495 1.15e-44 164
Msa0420080 MtrunA17_Chr2g0294921 29.459 499 291 16 25 491 161 630 1.23e-44 166
Msa0420080 MtrunA17_Chr2g0294931 28.112 498 307 13 21 491 8 481 1.69e-44 163
Msa0420080 MtrunA17_Chr7g0232341 26.916 509 291 19 20 491 2 466 3.74e-44 162
Msa0420080 MtrunA17_Chr5g0428081 27.254 488 310 12 27 491 14 479 4.40e-44 162
Msa0420080 MtrunA17_Chr6g0462551 32.781 302 174 7 200 487 174 460 4.55e-44 162
Msa0420080 MtrunA17_Chr8g0339451 29.227 414 234 11 91 480 74 452 5.27e-44 161
Msa0420080 MtrunA17_Chr7g0243761 27.572 486 292 14 24 491 11 454 1.21e-43 160
Msa0420080 MtrunA17_Chr8g0339461 30.871 379 215 12 130 484 109 464 1.57e-43 160
Msa0420080 MtrunA17_Chr5g0442581 26.758 512 309 15 21 497 2 482 2.09e-43 161
Msa0420080 MtrunA17_Chr4g0066221 28.600 493 298 14 27 491 14 480 3.08e-43 159
Msa0420080 MtrunA17_Chr1g0159551 26.327 471 287 14 29 480 19 448 3.15e-43 159
Msa0420080 MtrunA17_Chr5g0442541 28.740 508 283 20 21 492 2 466 3.53e-43 159
Msa0420080 MtrunA17_Chr7g0232311 31.494 308 176 6 200 488 169 460 5.95e-43 158
Msa0420080 MtrunA17_Chr8g0361371 27.613 507 285 19 21 488 4 467 6.89e-43 158
Msa0420080 MtrunA17_Chr7g0265151 26.036 507 326 15 19 496 2 488 7.12e-43 159
Msa0420080 MtrunA17_Chr5g0442521 27.308 509 291 17 21 488 2 472 7.52e-43 158
Msa0420080 MtrunA17_Chr7g0235051 30.040 506 262 23 18 490 6 452 8.28e-43 158
Msa0420080 MtrunA17_Chr8g0334851 27.146 501 285 17 22 484 4 462 9.14e-43 158
Msa0420080 MtrunA17_Chr5g0401851 26.181 508 297 16 26 491 12 483 1.10e-42 158
Msa0420080 MtrunA17_Chr4g0066281 27.291 491 292 14 27 491 15 466 1.12e-42 158
Msa0420080 MtrunA17_Chr5g0442601 27.326 516 301 17 18 494 398 878 1.39e-42 162
Msa0420080 MtrunA17_Chr5g0442601 34.973 183 93 4 264 430 164 336 7.31e-27 114
Msa0420080 MtrunA17_Chr8g0339601 31.690 284 159 7 219 479 47 318 3.09e-42 153
Msa0420080 MtrunA17_Chr8g0347281 27.593 482 288 15 23 480 17 461 5.69e-42 156
Msa0420080 MtrunA17_Chr3g0079731 26.494 502 302 15 25 489 7 478 6.81e-42 155
Msa0420080 MtrunA17_Chr8g0347271 27.254 477 296 12 23 480 18 462 9.28e-42 155
Msa0420080 MtrunA17_Chr5g0448521 26.706 513 293 19 21 494 2 470 1.13e-41 155
Msa0420080 MtrunA17_Chr8g0374971 27.833 503 292 15 25 491 13 480 1.16e-41 155
Msa0420080 MtrunA17_Chr8g0334861 26.721 494 304 15 21 490 3 462 3.03e-41 154
Msa0420080 MtrunA17_Chr1g0173121 24.850 499 292 14 25 491 15 462 4.90e-41 153
Msa0420080 MtrunA17_Chr4g0066261 27.181 493 306 16 27 491 14 481 5.73e-41 153
Msa0420080 MtrunA17_Chr4g0044521 27.677 495 304 19 17 489 2 464 7.90e-41 152
Msa0420080 MtrunA17_Chr7g0265051 27.539 512 309 18 20 495 3 488 8.23e-41 153
Msa0420080 MtrunA17_Chr8g0374941 28.486 502 286 20 27 491 952 1417 1.13e-40 156
Msa0420080 MtrunA17_Chr8g0374941 27.160 486 281 19 27 475 14 463 4.55e-35 140
Msa0420080 MtrunA17_Chr8g0374941 27.557 479 284 16 27 473 479 926 2.84e-34 137
Msa0420080 MtrunA17_Chr6g0454111 43.558 163 89 2 180 341 23 183 1.22e-40 144
Msa0420080 MtrunA17_Chr5g0416741 26.096 502 321 15 18 491 4 483 1.51e-40 152
Msa0420080 MtrunA17_Chr8g0374901 29.058 499 285 17 27 491 15 478 1.69e-40 152
Msa0420080 MtrunA17_Chr1g0153461 37.104 221 114 6 297 495 2 219 2.82e-40 144
Msa0420080 MtrunA17_Chr4g0011051 26.962 497 322 13 22 492 7 488 4.37e-40 151
Msa0420080 MtrunA17_Chr4g0066201 27.586 493 298 14 25 493 19 476 4.59e-40 150
Msa0420080 MtrunA17_Chr5g0442511 26.931 505 278 16 18 488 43 490 5.16e-40 151
Msa0420080 MtrunA17_Chr7g0265111 26.190 504 311 18 24 492 39 516 3.61e-39 149
Msa0420080 MtrunA17_Chr2g0329111 26.132 486 303 13 20 477 2 459 4.01e-39 148
Msa0420080 MtrunA17_Chr7g0218311 26.761 497 304 15 25 491 17 483 4.94e-39 148
Msa0420080 MtrunA17_Chr5g0410941 25.963 493 312 12 25 491 24 489 5.17e-39 148
Msa0420080 MtrunA17_Chr8g0350881 27.921 505 289 13 25 491 13 480 6.00e-39 147
Msa0420080 MtrunA17_Chr5g0442491 26.070 514 302 15 21 494 2 477 6.18e-39 147
Msa0420080 MtrunA17_Chr8g0334831 28.200 500 245 23 21 461 3 447 1.07e-38 147
Msa0420080 MtrunA17_Chr6g0463851 27.800 500 295 17 27 491 14 482 1.08e-38 147
Msa0420080 MtrunA17_Chr4g0066151 26.815 496 299 15 25 491 19 479 2.24e-38 146
Msa0420080 MtrunA17_Chr4g0066131 26.190 504 292 15 25 491 14 474 1.31e-37 144
Msa0420080 MtrunA17_Chr6g0463891 27.088 491 315 14 25 491 13 484 4.03e-37 142
Msa0420080 MtrunA17_Chr8g0339441 36.232 207 113 4 298 485 217 423 4.88e-37 141
Msa0420080 MtrunA17_Chr5g0432731 29.808 312 188 8 194 493 6 298 4.89e-37 138
Msa0420080 MtrunA17_Chr5g0416821 25.732 478 325 12 25 491 15 473 9.00e-37 142
Msa0420080 MtrunA17_Chr5g0420801 26.899 487 310 19 20 491 3 458 9.15e-37 141
Msa0420080 MtrunA17_Chr7g0243851 32.903 310 174 10 211 491 138 442 2.43e-36 140
Msa0420080 MtrunA17_Chr6g0463861 27.163 497 293 18 27 491 14 473 2.59e-36 140
Msa0420080 MtrunA17_Chr4g0044481 27.442 430 252 12 17 435 20 400 2.65e-36 139
Msa0420080 MtrunA17_Chr5g0429681 25.752 532 269 19 21 495 41 503 2.77e-36 140
Msa0420080 MtrunA17_Chr5g0403641 31.034 290 153 9 240 496 235 510 3.39e-36 140
Msa0420080 MtrunA17_Chr8g0370941 24.016 508 315 14 24 489 8 486 1.63e-35 138
Msa0420080 MtrunA17_Chr5g0429711 26.775 493 310 16 20 495 7 465 1.79e-35 137
Msa0420080 MtrunA17_Chr8g0355221 25.971 489 320 14 26 491 17 486 5.67e-35 137
Msa0420080 MtrunA17_Chr3g0118741 91.379 58 5 0 21 78 3 60 1.52e-34 124
Msa0420080 MtrunA17_Chr1g0165701 25.257 487 323 13 26 491 17 483 1.98e-34 135
Msa0420080 MtrunA17_Chr2g0302961 24.704 506 302 15 22 491 3 465 2.91e-34 134
Msa0420080 MtrunA17_Chr7g0243711 35.981 214 119 6 295 491 104 316 5.36e-34 130
Msa0420080 MtrunA17_Chr2g0294941 29.121 364 216 11 133 473 17 361 8.39e-34 131
Msa0420080 MtrunA17_Chr7g0241801 28.416 461 257 22 21 468 6 406 8.68e-34 132
Msa0420080 MtrunA17_Chr8g0361411 26.694 487 309 18 18 491 2 453 2.19e-33 131
Msa0420080 MtrunA17_Chr4g0042891 26.220 492 304 19 24 490 7 464 2.24e-33 132
Msa0420080 MtrunA17_Chr3g0106251 28.525 305 188 8 197 492 11 294 2.53e-32 125
Msa0420080 MtrunA17_Chr3g0079711 36.957 184 97 4 325 489 3 186 3.22e-32 122
Msa0420080 MtrunA17_Chr2g0307961 26.747 501 307 20 16 492 5 469 8.69e-32 127
Msa0420080 MtrunA17_Chr4g0042931 26.721 494 297 21 24 490 7 462 8.92e-32 127
Msa0420080 MtrunA17_Chr4g0066171 25.151 497 300 13 25 491 22 476 9.04e-32 127
Msa0420080 MtrunA17_Chr2g0302991 28.477 302 180 7 211 491 176 462 1.49e-31 126
Msa0420080 MtrunA17_Chr1g0196851 25.000 496 275 19 17 472 42 480 2.00e-31 126
Msa0420080 MtrunA17_Chr8g0369341 24.502 502 313 16 20 491 3 468 3.97e-31 125
Msa0420080 MtrunA17_Chr7g0241781 27.564 468 260 22 21 472 6 410 7.84e-31 124
Msa0420080 MtrunA17_Chr8g0336251 27.292 469 278 16 24 465 7 439 1.33e-30 124
Msa0420080 MtrunA17_Chr8g0336321 27.292 469 278 16 24 465 7 439 1.46e-30 124
Msa0420080 MtrunA17_Chr7g0243911 32.599 227 115 7 271 480 4 209 1.19e-29 115
Msa0420080 MtrunA17_Chr1g0207881 42.149 121 64 1 366 480 253 373 1.85e-29 119
Msa0420080 MtrunA17_Chr8g0367221 27.586 464 275 20 24 462 798 1225 2.51e-29 122
Msa0420080 MtrunA17_Chr8g0367221 28.153 444 248 21 24 442 12 409 4.20e-27 115
Msa0420080 MtrunA17_Chr8g0367221 25.647 464 294 21 24 467 1288 1720 3.34e-24 107
Msa0420080 MtrunA17_Chr2g0278721 27.898 509 298 23 17 496 510 978 3.90e-29 122
Msa0420080 MtrunA17_Chr2g0278721 25.855 468 294 17 20 468 10 443 1.63e-27 117
Msa0420080 MtrunA17_Chr7g0243811 25.117 426 251 13 36 438 1 381 1.15e-28 117
Msa0420080 MtrunA17_Chr6g0466831 25.100 498 313 18 17 495 11 467 4.73e-28 116
Msa0420080 MtrunA17_Chr7g0243611 34.071 226 125 8 238 444 76 296 5.58e-28 113
Msa0420080 MtrunA17_Chr8g0382021 31.156 199 121 4 298 480 279 477 5.82e-28 116
Msa0420080 MtrunA17_Chr4g0029131 23.567 471 296 15 24 472 12 440 1.04e-27 117
Msa0420080 MtrunA17_Chr6g0464091 27.021 433 268 18 17 434 10 409 1.77e-27 115
Msa0420080 MtrunA17_Chr4g0029151 23.210 461 310 12 24 472 20 448 3.53e-27 114
Msa0420080 MtrunA17_Chr2g0302851 25.793 473 288 17 17 468 9 439 8.66e-27 112
Msa0420080 MtrunA17_Chr6g0466841 25.352 497 313 19 17 495 11 467 1.29e-26 112
Msa0420080 MtrunA17_Chr5g0427561 54.762 84 38 0 409 492 2 85 6.23e-26 101
Msa0420080 MtrunA17_Chr6g0482061 24.000 475 324 12 24 479 11 467 2.97e-25 108
Msa0420080 MtrunA17_Chr7g0232351 27.404 416 229 18 24 409 6 378 3.41e-25 107
Msa0420080 MtrunA17_Chr2g0278741 26.526 475 288 18 17 468 89 525 9.23e-25 107
Msa0420080 MtrunA17_Chr8g0337381 43.802 121 62 2 371 487 3 121 1.79e-24 98.6
Msa0420080 MtrunA17_Chr4g0069611 24.524 473 280 16 24 468 15 438 2.13e-24 105
Msa0420080 MtrunA17_Chr5g0409591 28.862 246 144 8 240 458 212 453 3.17e-24 105
Msa0420080 MtrunA17_Chr5g0431431 30.233 258 152 8 194 447 110 343 1.75e-23 101
Msa0420080 MtrunA17_Chr6g0454381 33.571 140 93 0 142 281 3 142 4.02e-23 95.1
Msa0420080 MtrunA17_Chr4g0040691 23.434 495 309 19 24 492 8 458 6.75e-23 101
Msa0420080 MtrunA17_Chr6g0454391 64.062 64 23 0 384 447 11 74 1.11e-22 93.2
Msa0420080 MtrunA17_Chr2g0283041 24.678 466 291 20 24 468 7 433 1.08e-21 97.8
Msa0420080 MtrunA17_Chr5g0427571 29.870 231 150 6 238 460 42 268 2.34e-21 94.7
Msa0420080 MtrunA17_Chr7g0231631 28.346 254 173 6 242 491 11 259 6.74e-21 92.4
Msa0420080 MtrunA17_Chr3g0092031 31.361 169 106 4 301 463 6 170 7.50e-21 90.5
Msa0420080 MtrunA17_Chr8g0357361 29.557 203 133 5 234 434 57 251 1.14e-20 91.7
Msa0420080 MtrunA17_Chr4g0066141 35.669 157 84 4 352 491 195 351 9.19e-20 90.9
Msa0420080 MtrunA17_Chr4g0040711 24.171 422 275 14 24 434 8 395 1.04e-19 91.7
Msa0420080 MtrunA17_Chr7g0250021 25.648 347 212 11 24 361 12 321 1.05e-19 90.1
Msa0420080 MtrunA17_Chr2g0319801 22.976 457 299 13 24 462 8 429 2.51e-18 87.4
Msa0420080 MtrunA17_Chr4g0039881 29.362 235 146 7 242 468 193 415 2.59e-18 87.4
Msa0420080 MtrunA17_Chr2g0319791 24.516 465 296 21 14 462 4 429 6.21e-18 86.3
Msa0420080 MtrunA17_Chr2g0319731 23.441 465 287 16 24 462 25 446 1.76e-17 85.1
Msa0420080 MtrunA17_Chr2g0319751 23.307 502 305 21 24 494 485 937 6.34e-17 84.3
Msa0420080 MtrunA17_Chr2g0319751 23.353 501 280 22 24 493 8 435 7.19e-15 77.8
Msa0420080 MtrunA17_Chr2g0319761 28.502 207 138 5 295 492 253 458 1.72e-16 81.6
Msa0420080 MtrunA17_Chr4g0029161 21.064 470 281 15 24 472 12 412 6.32e-16 80.1
Msa0420080 MtrunA17_Chr7g0243731 45.588 68 36 1 368 434 6 73 1.38e-14 68.9
Msa0420080 MtrunA17_Chr1g0207911 24.900 249 170 7 25 269 9 244 6.97e-13 68.9
Msa0420080 MtrunA17_Chr7g0267931 67.568 37 11 1 29 64 25 61 1.78e-11 59.7
Msa0420080 MtrunA17_Chr2g0321331 28.395 162 91 5 309 462 94 238 4.05e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0420080 AT1G22380.1 51.471 476 229 2 18 492 7 481 0.0 536
Msa0420080 AT1G22360.1 49.789 474 236 2 20 492 6 478 0.0 522
Msa0420080 AT1G22400.1 49.580 476 237 3 19 492 8 482 0.0 517
Msa0420080 AT1G22340.1 48.326 478 246 1 19 495 8 485 0.0 516
Msa0420080 AT1G22370.2 50.420 476 229 3 18 492 7 476 8.37e-179 511
Msa0420080 AT1G22360.2 48.312 474 231 3 20 492 6 466 1.44e-174 499
Msa0420080 AT1G78270.1 46.473 482 254 4 18 497 7 486 5.62e-162 468
Msa0420080 AT1G22370.1 49.671 304 151 2 190 492 4 306 8.66e-103 310
Msa0420080 AT3G46660.1 36.897 477 258 13 25 491 15 458 3.98e-85 270
Msa0420080 AT5G59590.1 34.737 475 274 11 21 491 7 449 2.12e-84 268
Msa0420080 AT2G36970.1 31.967 488 297 9 18 491 4 470 1.31e-83 267
Msa0420080 AT5G59580.1 35.084 476 276 10 22 495 7 451 1.67e-83 266
Msa0420080 AT3G46690.1 36.345 476 266 11 21 491 6 449 2.50e-83 265
Msa0420080 AT5G38010.1 35.000 480 274 10 19 491 5 453 3.18e-83 265
Msa0420080 AT3G46650.1 35.504 476 250 11 22 493 8 430 1.22e-82 263
Msa0420080 AT3G11340.1 33.753 477 280 9 18 492 3 445 1.74e-82 263
Msa0420080 AT3G46670.1 34.591 477 268 13 24 494 9 447 2.38e-82 263
Msa0420080 AT3G46680.1 35.307 473 269 12 21 488 6 446 6.02e-82 261
Msa0420080 AT5G38040.1 34.839 465 265 11 32 491 18 449 9.63e-82 261
Msa0420080 AT3G21560.1 31.349 504 293 14 8 491 2 472 5.53e-77 250
Msa0420080 AT5G05880.1 32.059 471 281 11 24 488 8 445 1.07e-76 248
Msa0420080 AT3G46700.1 34.038 473 276 10 21 491 6 444 3.62e-76 246
Msa0420080 AT5G05890.1 32.632 475 277 11 24 488 8 449 8.07e-74 241
Msa0420080 AT4G15500.1 31.006 487 294 12 20 492 5 463 7.46e-73 239
Msa0420080 AT3G46720.1 33.194 479 272 11 19 491 4 440 8.08e-73 238
Msa0420080 AT2G28080.1 32.278 474 289 10 28 492 22 472 2.17e-71 235
Msa0420080 AT4G15480.1 31.124 498 295 15 12 491 11 478 4.79e-71 234
Msa0420080 AT5G05870.1 31.513 476 289 11 24 491 8 454 6.32e-71 233
Msa0420080 AT5G05900.1 30.526 475 282 11 24 488 8 444 8.06e-71 233
Msa0420080 AT4G15490.1 31.855 496 283 14 20 492 4 467 1.06e-69 230
Msa0420080 AT3G55710.1 31.976 491 277 16 24 496 8 459 1.84e-69 229
Msa0420080 AT3G55700.1 30.228 483 292 12 24 496 8 455 1.70e-67 224
Msa0420080 AT5G05860.1 31.857 474 284 10 24 492 9 448 1.15e-66 222
Msa0420080 AT2G26480.1 31.579 475 289 11 21 492 5 446 1.40e-66 221
Msa0420080 AT2G31750.1 29.607 483 297 14 22 493 6 456 9.73e-62 209
Msa0420080 AT2G31750.2 29.607 483 297 14 22 493 6 456 3.05e-61 208
Msa0420080 AT1G05680.1 30.538 465 286 11 24 480 6 441 4.65e-61 207
Msa0420080 AT1G05675.1 28.753 473 300 11 24 488 6 449 2.62e-60 205
Msa0420080 AT3G02100.1 29.388 490 294 15 17 489 6 460 2.66e-60 205
Msa0420080 AT2G31790.1 30.169 474 290 12 18 480 2 445 1.34e-59 203
Msa0420080 AT2G43820.1 28.631 482 294 13 21 491 4 446 1.35e-59 203
Msa0420080 AT2G30140.2 30.739 501 274 17 15 495 7 454 2.26e-57 197
Msa0420080 AT2G30140.1 30.539 501 276 17 15 495 7 455 3.00e-57 197
Msa0420080 AT2G43840.1 27.386 482 298 13 22 491 5 446 6.28e-57 196
Msa0420080 AT2G43840.2 27.386 482 298 13 22 491 5 446 8.77e-57 196
Msa0420080 AT2G36750.1 31.111 495 297 13 24 493 10 485 5.95e-55 192
Msa0420080 AT5G17050.1 26.033 484 323 11 16 493 4 458 1.95e-54 189
Msa0420080 AT4G34131.1 30.178 507 284 15 21 491 7 479 4.61e-54 189
Msa0420080 AT2G15480.1 29.234 496 306 11 20 491 6 480 8.14e-54 188
Msa0420080 AT2G36800.1 29.960 504 307 17 17 493 5 489 3.30e-53 187
Msa0420080 AT2G15490.3 28.974 497 308 11 19 491 2 477 5.91e-53 186
Msa0420080 AT4G15550.1 27.621 496 296 14 23 490 12 472 7.35e-53 186
Msa0420080 AT1G05560.1 26.735 490 308 13 23 497 4 457 8.66e-53 185
Msa0420080 AT1G05560.2 26.735 490 308 13 23 497 54 507 1.98e-52 186
Msa0420080 AT4G01070.1 28.200 500 273 14 20 480 4 456 2.61e-52 184
Msa0420080 AT2G30150.2 29.668 482 283 14 24 491 13 452 2.63e-52 184
Msa0420080 AT1G24100.1 28.803 493 285 17 22 491 9 458 5.78e-52 183
Msa0420080 AT2G15480.2 28.854 506 305 12 20 491 6 490 7.72e-52 183
Msa0420080 AT2G15490.1 28.800 500 308 12 19 491 2 480 8.44e-52 183
Msa0420080 AT4G14090.1 30.081 492 283 18 17 490 6 454 3.82e-51 181
Msa0420080 AT2G36770.1 28.709 519 317 15 1 494 1 491 4.99e-51 181
Msa0420080 AT1G05530.1 26.166 493 302 14 22 492 3 455 1.01e-50 179
Msa0420080 AT5G17040.1 26.250 480 299 11 24 492 5 440 1.31e-50 179
Msa0420080 AT2G30150.1 29.498 478 281 14 28 491 1 436 1.76e-50 178
Msa0420080 AT2G36780.1 29.800 500 298 16 24 493 14 490 1.78e-50 180
Msa0420080 AT3G53160.1 28.400 500 309 16 24 495 8 486 2.30e-49 177
Msa0420080 AT1G30530.1 25.462 487 321 12 10 492 3 451 2.50e-49 176
Msa0420080 AT5G26310.1 28.711 512 278 19 19 490 2 466 8.14e-49 175
Msa0420080 AT2G23250.1 28.512 477 287 18 27 491 1 435 1.19e-48 173
Msa0420080 AT5G17040.2 31.596 307 193 4 188 492 47 338 2.44e-48 170
Msa0420080 AT5G37950.1 33.158 380 208 11 39 409 1 343 2.89e-48 170
Msa0420080 AT5G66690.1 27.811 507 289 17 19 490 2 466 3.48e-48 173
Msa0420080 AT4G34135.1 29.102 512 292 13 17 491 4 481 6.27e-48 172
Msa0420080 AT5G37950.2 32.620 374 212 9 39 409 1 337 1.86e-47 168
Msa0420080 AT2G36760.1 28.400 500 307 16 24 494 14 491 2.85e-47 171
Msa0420080 AT2G23260.1 26.543 486 311 14 17 491 3 453 5.38e-47 169
Msa0420080 AT1G10400.1 30.600 500 283 21 21 494 4 465 2.70e-46 168
Msa0420080 AT2G36790.1 30.223 493 305 14 24 493 13 489 4.53e-46 168
Msa0420080 AT3G22250.1 27.660 470 283 15 20 464 4 441 8.69e-46 166
Msa0420080 AT1G01420.1 27.824 478 278 15 23 471 7 446 1.48e-45 166
Msa0420080 AT1G01420.2 27.824 478 278 15 23 471 10 449 1.63e-45 166
Msa0420080 AT4G36770.1 27.859 481 283 17 24 476 4 448 7.50e-45 164
Msa0420080 AT5G17030.1 28.477 302 201 3 193 493 170 457 3.10e-43 159
Msa0420080 AT1G01390.1 28.226 496 298 15 18 488 2 464 1.23e-42 158
Msa0420080 AT1G01390.2 28.455 492 294 15 18 484 19 477 1.58e-42 158
Msa0420080 AT2G16890.2 28.150 508 276 23 24 491 9 467 9.17e-42 155
Msa0420080 AT4G34138.1 26.036 507 301 13 22 491 9 478 1.05e-41 155
Msa0420080 AT3G50740.1 27.395 522 278 20 22 493 5 475 1.06e-41 155
Msa0420080 AT3G53150.1 25.676 518 323 12 18 494 16 512 1.68e-41 155
Msa0420080 AT2G29710.1 25.873 487 321 15 21 492 2 463 4.52e-41 154
Msa0420080 AT5G14860.1 27.075 506 301 17 20 491 4 475 5.17e-41 154
Msa0420080 AT2G18570.1 26.275 510 286 18 22 489 3 464 2.49e-40 151
Msa0420080 AT3G16520.3 31.776 321 192 10 180 489 153 457 3.50e-39 148
Msa0420080 AT5G03490.1 28.902 519 275 23 7 490 2 461 1.15e-38 147
Msa0420080 AT2G29730.1 24.017 483 329 14 24 492 5 463 8.67e-38 144
Msa0420080 AT3G16520.1 31.949 313 184 10 180 477 153 451 4.70e-37 142
Msa0420080 AT3G16520.2 32.509 283 167 8 180 451 153 422 5.74e-37 142
Msa0420080 AT2G18560.1 30.592 304 160 10 219 489 89 374 1.02e-36 140
Msa0420080 AT3G21790.1 26.931 505 306 17 22 491 2 478 1.83e-36 141
Msa0420080 AT1G51210.1 27.729 458 277 13 20 465 16 431 8.83e-36 138
Msa0420080 AT1G73880.1 25.662 491 320 14 17 492 7 467 2.26e-34 135
Msa0420080 AT3G21780.1 26.087 506 309 19 22 496 2 473 5.67e-34 134
Msa0420080 AT5G65550.1 26.652 469 288 16 22 469 7 440 7.35e-34 133
Msa0420080 AT1G07250.1 25.586 512 308 18 21 496 3 477 1.71e-33 132
Msa0420080 AT1G07240.1 25.403 496 317 15 25 492 6 476 5.61e-33 131
Msa0420080 AT3G21750.1 23.228 508 317 14 22 494 2 471 1.03e-32 130
Msa0420080 AT3G21760.1 24.752 505 319 16 22 491 2 480 1.28e-32 130
Msa0420080 AT3G21800.1 32.028 281 155 8 240 496 212 480 4.22e-32 129
Msa0420080 AT5G49690.1 27.174 460 273 20 24 463 10 427 5.75e-32 128
Msa0420080 AT4G15260.1 28.179 291 176 5 227 496 81 359 1.25e-31 125
Msa0420080 AT4G15280.1 24.131 518 305 17 22 494 2 476 2.37e-31 126
Msa0420080 AT2G29740.1 29.699 266 162 7 238 491 222 474 2.91e-31 126
Msa0420080 AT4G15280.2 23.901 523 310 17 17 494 29 508 4.70e-31 126
Msa0420080 AT1G07260.1 29.104 268 165 6 238 492 217 472 5.42e-31 125
Msa0420080 AT5G12890.1 27.033 492 293 20 24 480 10 470 9.72e-31 125
Msa0420080 AT2G16890.3 26.522 460 250 22 24 444 9 419 1.30e-30 123
Msa0420080 AT2G29750.1 24.178 517 310 18 21 497 5 479 3.73e-30 123
Msa0420080 AT5G54010.1 24.798 496 300 21 22 494 4 449 1.40e-26 112
Msa0420080 AT4G27560.1 23.529 493 305 17 22 492 5 447 6.97e-25 107
Msa0420080 AT4G27570.1 23.504 468 289 16 22 468 5 424 8.58e-25 107
Msa0420080 AT2G22590.1 25.840 476 291 18 17 467 8 446 2.17e-24 106
Msa0420080 AT5G53990.1 25.629 437 253 16 21 442 3 382 2.30e-23 103
Msa0420080 AT1G64910.1 25.431 464 270 18 21 462 3 412 3.92e-23 102
Msa0420080 AT3G29630.1 24.533 428 273 15 22 444 4 386 1.22e-22 100
Msa0420080 AT4G34135.2 27.324 355 200 10 17 345 4 326 2.99e-22 98.2
Msa0420080 AT5G54060.1 24.211 475 310 14 17 473 6 448 1.55e-21 97.8
Msa0420080 AT1G64920.1 23.577 492 309 20 20 490 2 447 8.98e-21 95.1
Msa0420080 AT3G29630.2 23.653 427 252 13 22 444 4 360 1.09e-20 94.7
Msa0420080 AT1G06000.1 26.259 278 184 8 227 491 164 433 1.65e-20 94.4
Msa0420080 AT4G09500.2 22.845 464 292 17 22 468 4 418 2.97e-19 90.5
Msa0420080 AT2G22930.1 21.983 464 292 17 24 468 6 418 4.26e-18 87.0
Msa0420080 AT1G50580.1 23.026 456 290 16 22 462 4 413 2.45e-17 84.7
Msa0420080 AT4G09500.1 27.429 175 120 3 301 468 219 393 3.74e-17 84.0
Msa0420080 AT4G01070.2 22.917 384 215 12 19 368 3 339 4.11e-16 80.1

Find 115 sgRNAs with CRISPR-Local

Find 196 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCATAAAATGGTTGAGTAAA+TGG 0.151034 3_2:-68356974 Msa0420080:CDS
CATGTTGACTATTCTGAATT+TGG 0.236044 3_2:-68356283 Msa0420080:three_prime_UTR
TCTTCACCCATTACTATATC+TGG 0.244649 3_2:+68356831 None:intergenic
GTTGCATCTTTATCTGATTC+TGG 0.253266 3_2:+68359159 None:intergenic
TGGAAGAGTGGCTAAGGATT+TGG 0.280456 3_2:-68358998 Msa0420080:CDS
GATTGCTCATTTGATTGATT+TGG 0.290032 3_2:-68356114 Msa0420080:three_prime_UTR
CTTGGAGCTGACTTTGTTAA+GGG 0.310099 3_2:-68359222 Msa0420080:CDS
ATGACTCAGAATGCATAAAA+TGG 0.312996 3_2:-68356986 Msa0420080:CDS
GAAATGTAATAGATTTGTTT+TGG 0.317995 3_2:-68356092 Msa0420080:three_prime_UTR
CAGGTCTGCCTACTATTTGT+TGG 0.330319 3_2:-68356656 Msa0420080:CDS
CAAATACAATATGAGGCTTT+TGG 0.334890 3_2:+68359367 None:intergenic
ACACTTGAAGCAATTTCTTC+AGG 0.336883 3_2:-68356675 Msa0420080:CDS
GGGCCAATGCTATATATGTT+AGG 0.338040 3_2:+68357083 None:intergenic
AGCTTCTACTTGTGGGTTTG+TGG 0.343584 3_2:-68358950 Msa0420080:CDS
TATCTTTGATTATGTTCCTT+TGG 0.343696 3_2:-68356136 Msa0420080:three_prime_UTR
TCTTGGAGCTGACTTTGTTA+AGG 0.346942 3_2:-68359223 Msa0420080:CDS
CTGAGCAACAAACAAATTGT+AGG 0.353752 3_2:-68356623 Msa0420080:CDS
ACCATTACAACGTAGGAGTT+TGG 0.354802 3_2:+68359299 None:intergenic
GAAATGATGGAAGGAGAAAA+AGG 0.359746 3_2:-68356522 Msa0420080:CDS
GATGGCAATTATGACTTTGC+TGG 0.363761 3_2:-68359018 Msa0420080:CDS
TCAGTACTATATATTAATTA+TGG 0.370543 3_2:-68356942 Msa0420080:CDS
GGAAGAGTGGCTAAGGATTT+GGG 0.372307 3_2:-68358997 Msa0420080:CDS
TCAGCAATTATACAAGTAAC+TGG 0.373014 3_2:+68359039 None:intergenic
AACACATTTGAAGAATTAGA+AGG 0.379838 3_2:-68357137 Msa0420080:CDS
TTATGCAACACTTGGAGAAT+AGG 0.381141 3_2:-68356597 Msa0420080:CDS
ATGGTCTCAAATTGAAAATC+AGG 0.386462 3_2:+68359195 None:intergenic
TATTTGAGTTATATTATAAT+CGG 0.388927 3_2:-68356379 Msa0420080:exon
ATCACTTGAAAGAATTTGCT+TGG 0.389995 3_2:-68356896 Msa0420080:CDS
GCTTCTACTTGTGGGTTTGT+GGG 0.397074 3_2:-68358949 Msa0420080:CDS
TCACTTGAAAGAATTTGCTT+GGG 0.404835 3_2:-68356895 Msa0420080:CDS
CCTTGGATACAAGTTTAGAT+TGG 0.405206 3_2:-68357292 Msa0420080:CDS
GTGAATCCCTTGACACCCTT+AGG 0.405921 3_2:-68357115 Msa0420080:CDS
ACAAGTTTAGATTGGATCTC+TGG 0.407043 3_2:-68357284 Msa0420080:CDS
AATTCCAACCACAATGAGTT+AGG 0.409400 3_2:+68356700 None:intergenic
TTTGGACAGCTTCTACTTGT+GGG 0.414329 3_2:-68358957 Msa0420080:CDS
CATAAAATGGTTGAGTAAAT+GGG 0.417737 3_2:-68356973 Msa0420080:CDS
CAGTTTAATTTACCTTTGAA+TGG 0.422394 3_2:+68358886 None:intergenic
GCAAAACCGTATTCTTTCTC+AGG 0.431385 3_2:+68357035 None:intergenic
TGAATTCAACCACAAACGTT+TGG 0.432420 3_2:-68359253 Msa0420080:CDS
CAATGTTGTGTGATTCAACT+AGG 0.436379 3_2:-68359125 Msa0420080:CDS
AAATTAACTATGATGTGAAA+AGG 0.437634 3_2:-68356569 Msa0420080:CDS
AATGGTACAAATACAATATG+AGG 0.439304 3_2:+68359360 None:intergenic
TCTGATTCTGGTAAACCATC+AGG 0.441558 3_2:+68359171 None:intergenic
AAACGTTTGGTAAAGTCTCT+TGG 0.443702 3_2:-68359240 Msa0420080:CDS
CTTTGGACAGCTTCTACTTG+TGG 0.458489 3_2:-68358958 Msa0420080:CDS
GCCAAACTCCTACGTTGTAA+TGG 0.460605 3_2:-68359300 Msa0420080:CDS
CTAGATGAAGTCAAGGATAG+AGG 0.462415 3_2:-68356783 Msa0420080:CDS
AATTAACTATGATGTGAAAA+GGG 0.466340 3_2:-68356568 Msa0420080:CDS
GGCCAATGCTATATATGTTA+GGG 0.467636 3_2:+68357084 None:intergenic
ATGAGGCCAGATATAGTAAT+GGG 0.468666 3_2:-68356837 Msa0420080:CDS
GTTTGTTGCTCAGCAAAGAA+AGG 0.473094 3_2:+68356633 None:intergenic
CTTGCTCATCCATCAGTTGG+AGG 0.473224 3_2:-68356726 Msa0420080:CDS
GAGACTTTACCAAACGTTTG+TGG 0.473697 3_2:+68359244 None:intergenic
CAGTGTTCACAAAGGTTATG+TGG 0.477175 3_2:+68359274 None:intergenic
AAGAAAGGCCAACAAATAGT+AGG 0.487158 3_2:+68356648 None:intergenic
CTTCTACTTGTGGGTTTGTG+GGG 0.488063 3_2:-68358948 Msa0420080:CDS
ACATGACCTTGTGCTGGAAA+TGG 0.488947 3_2:+68359342 None:intergenic
GTCAACATGACATTGATTGA+TGG 0.501093 3_2:+68356297 None:intergenic
TGAATCCCTTGACACCCTTA+GGG 0.501956 3_2:-68357114 Msa0420080:CDS
ATACAAGTAACTGGAATATG+AGG 0.502466 3_2:+68359048 None:intergenic
AGAACTTGTGATGGAAATGA+TGG 0.507214 3_2:-68356535 Msa0420080:CDS
AACCCTAACATATATAGCAT+TGG 0.514549 3_2:-68357086 Msa0420080:CDS
CTGATGGATGAGCAAGCACT+TGG 0.515271 3_2:+68356733 None:intergenic
CCAATCTAAACTTGTATCCA+AGG 0.516376 3_2:+68357292 None:intergenic
AGTTTGGCTAGTTGCATGAA+AGG 0.517620 3_2:+68359315 None:intergenic
ATTGGCCCACTTCACATGCT+TGG 0.521488 3_2:-68357068 Msa0420080:CDS
TCAGTGACTCTGATGAAGCT+TGG 0.522849 3_2:+68357233 None:intergenic
CTAGTTGAATCACACAACAT+TGG 0.524951 3_2:+68359126 None:intergenic
TGGCTATGACTATTAGGAGG+TGG 0.526998 3_2:+68359387 None:intergenic
AGAGGAATTCTTCCATTCAA+AGG 0.528099 3_2:-68358898 Msa0420080:intron
TGTGGGGTATTTGCAATTCG+AGG 0.529153 3_2:-68358932 Msa0420080:CDS
ACAAAATTGTGTGAGATCAT+CGG 0.529236 3_2:-68357171 Msa0420080:CDS
GGGTTCACATGACCTTGTGC+TGG 0.530108 3_2:+68359336 None:intergenic
AGAGATGAGACAAAACTGCT+TGG 0.532493 3_2:-68356496 Msa0420080:CDS
TGACTCTGATGAAGCTTGGA+AGG 0.534999 3_2:+68357237 None:intergenic
CTTTGCTGGAAGAGTGGCTA+AGG 0.536699 3_2:-68359004 Msa0420080:CDS
TTCGAGGAGCTTGTCAAAAG+AGG 0.537426 3_2:-68358916 Msa0420080:CDS
AGAGATAACAGAACTTGTGA+TGG 0.539853 3_2:-68356544 Msa0420080:CDS
AAGTAGAAGCTGTCCAAAGT+TGG 0.540479 3_2:+68358962 None:intergenic
CAACACTTGGAGAATAGGAA+TGG 0.540623 3_2:-68356592 Msa0420080:CDS
GGTTCCTAACTCATTGTGGT+TGG 0.541326 3_2:-68356704 Msa0420080:CDS
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3_2:+68359176 None:intergenic
GCCTACCAAGCATGTGAAGT+GGG 0.545551 3_2:+68357063 None:intergenic
AGCTACAGATGCTACTAATG+TGG 0.548442 3_2:-68356460 Msa0420080:CDS
CACTTGAAAGAATTTGCTTG+GGG 0.550965 3_2:-68356894 Msa0420080:CDS
GCATTCGAGAGATCCAACTT+TGG 0.553124 3_2:-68358975 Msa0420080:CDS
GTGCTTGCTCATCCATCAGT+TGG 0.553399 3_2:-68356729 Msa0420080:CDS
TTTAGCCCTAAGGGTGTCAA+GGG 0.554175 3_2:+68357109 None:intergenic
GTTACTTGTATAATTGCTGA+TGG 0.554672 3_2:-68359036 Msa0420080:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.555128 3_2:+68359316 None:intergenic
TTGCTCATCCATCAGTTGGA+GGG 0.557925 3_2:-68356725 Msa0420080:CDS
GTTAGGAACCCTCCAACTGA+TGG 0.561564 3_2:+68356717 None:intergenic
GGAGGGTTCCTAACTCATTG+TGG 0.564364 3_2:-68356708 Msa0420080:CDS
TTATGACTTTGCTGGAAGAG+TGG 0.569942 3_2:-68359010 Msa0420080:CDS
CAATTTGAGACCATACCTGA+TGG 0.571463 3_2:-68359186 Msa0420080:CDS
CTATGACTATTAGGAGGTGG+AGG 0.571491 3_2:+68359390 None:intergenic
GTAGGTATTTATGCAACACT+TGG 0.572740 3_2:-68356605 Msa0420080:CDS
TATTGTGGTTCTTGTTGACA+AGG 0.574072 3_2:-68356185 Msa0420080:three_prime_UTR
ACTTGTATCCAAGGTGCCAT+CGG 0.578172 3_2:+68357301 None:intergenic
GCTACAGATGCTACTAATGT+GGG 0.582080 3_2:-68356459 Msa0420080:CDS
AATGAGGCCAGATATAGTAA+TGG 0.584372 3_2:-68356838 Msa0420080:CDS
GCCCACTTCACATGCTTGGT+AGG 0.589057 3_2:-68357064 Msa0420080:CDS
TTAATCACGAGCTCTTTGAA+AGG 0.592339 3_2:+68359087 None:intergenic
TTAATATATAGTACTGAGCA+AGG 0.597770 3_2:+68356948 None:intergenic
ATAGAGGATACATAACAAGT+TGG 0.603705 3_2:-68356767 Msa0420080:CDS
TGCCTACCAAGCATGTGAAG+TGG 0.610099 3_2:+68357062 None:intergenic
TGAGACAAAACTGCTTGGAG+TGG 0.611958 3_2:-68356491 Msa0420080:CDS
GTATGGACAGGAAAATATTG+TGG 0.616787 3_2:-68356200 Msa0420080:three_prime_UTR
TTTGTACCATTTCCAGCACA+AGG 0.617582 3_2:-68359348 Msa0420080:CDS
ACTTCATCTAGAAAATCTTG+TGG 0.630695 3_2:+68356795 None:intergenic
CAATCAAATGAGCAATCCAA+AGG 0.640979 3_2:+68356120 None:intergenic
CTTGTGATGGAAATGATGGA+AGG 0.648111 3_2:-68356531 Msa0420080:CDS
GTTGAATTCAGTGTTCACAA+AGG 0.652579 3_2:+68359266 None:intergenic
TGTGGAAACCATTACAACGT+AGG 0.697450 3_2:+68359292 None:intergenic
ACAGATGCTACTAATGTGGG+AGG 0.700783 3_2:-68356456 Msa0420080:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTTAATGTATTTAAAAAG+TGG + chr3_2:68356776-68356795 None:intergenic 10.0%
!! AAAAAAAAAAAATATCAGTT+GGG + chr3_2:68357633-68357652 None:intergenic 10.0%
!! AAAAAAAAAAAAATATCAGT+TGG + chr3_2:68357634-68357653 None:intergenic 10.0%
!!! ATTCTAAAATAAAGAAATAA+AGG + chr3_2:68357768-68357787 None:intergenic 10.0%
!! ATTAAAATCAATATAAACAA+AGG + chr3_2:68357976-68357995 None:intergenic 10.0%
!!! TATTTGAGTTATATTATAAT+CGG - chr3_2:68359136-68359155 Msa0420080:CDS 10.0%
!!! TTATTTTTTCTAAAGAGTAT+TGG - chr3_2:68356962-68356981 Msa0420080:CDS 15.0%
!!! TTATTTTTTGGAATATACTT+AGG + chr3_2:68357010-68357029 None:intergenic 15.0%
!! TTATACATTCATAATATTCA+TGG - chr3_2:68357208-68357227 Msa0420080:CDS 15.0%
!!! TGTTTAGGTAATTTTTTTTT+TGG - chr3_2:68357590-68357609 Msa0420080:intron 15.0%
!!! TTTTTTTTTGAATCATGATA+TGG - chr3_2:68357852-68357871 Msa0420080:intron 15.0%
!! TCAGTACTATATATTAATTA+TGG - chr3_2:68358573-68358592 Msa0420080:intron 15.0%
!! GAAAATTATGAAGAAAAAAA+AGG + chr3_2:68359291-68359310 None:intergenic 15.0%
!! TTAATGCGATATGAATATTT+AGG - chr3_2:68357735-68357754 Msa0420080:intron 20.0%
!!! ATAGTAAGTTACCATTTTTA+TGG - chr3_2:68358652-68358671 Msa0420080:intron 20.0%
!! AAATTAACTATGATGTGAAA+AGG - chr3_2:68358946-68358965 Msa0420080:CDS 20.0%
!! AATTAACTATGATGTGAAAA+GGG - chr3_2:68358947-68358966 Msa0420080:CDS 20.0%
!!! GAAATGTAATAGATTTGTTT+TGG - chr3_2:68359423-68359442 Msa0420080:CDS 20.0%
! AATGGTACAAATACAATATG+AGG + chr3_2:68356158-68356177 None:intergenic 25.0%
!! CAGTTTAATTTACCTTTGAA+TGG + chr3_2:68356632-68356651 None:intergenic 25.0%
!! GAATATACTTAGGTACTTTT+GGG + chr3_2:68357000-68357019 None:intergenic 25.0%
! AGTCAATAAGTAGTTCAAAT+CGG - chr3_2:68357165-68357184 Msa0420080:CDS 25.0%
! ATTTGACGCATTTAATACAA+GGG + chr3_2:68357270-68357289 None:intergenic 25.0%
! AATTTGACGCATTTAATACA+AGG + chr3_2:68357271-68357290 None:intergenic 25.0%
!! TTAAATGCGTCAAATTTTGA+CGG - chr3_2:68357275-68357294 Msa0420080:CDS 25.0%
!!! ATTAGTTTAGCTACTTTTCT+TGG + chr3_2:68357457-68357476 None:intergenic 25.0%
!!! TTTTTTTTTGGTACAAGAGA+AGG - chr3_2:68357602-68357621 Msa0420080:intron 25.0%
! AAATGTACATCACAGAAATT+AGG + chr3_2:68357922-68357941 None:intergenic 25.0%
! AACACATTTGAAGAATTAGA+AGG - chr3_2:68358378-68358397 Msa0420080:intron 25.0%
! CATAAAATGGTTGAGTAAAT+GGG - chr3_2:68358542-68358561 Msa0420080:intron 25.0%
!! TTAATATATAGTACTGAGCA+AGG + chr3_2:68358570-68358589 None:intergenic 25.0%
!!! TACCATTTTTATGGATAATG+AGG - chr3_2:68358661-68358680 Msa0420080:intron 25.0%
!! CTTCATAATTTTCAACTGTA+TGG - chr3_2:68359298-68359317 Msa0420080:CDS 25.0%
! TATCTTTGATTATGTTCCTT+TGG - chr3_2:68359379-68359398 Msa0420080:CDS 25.0%
! TTTTCTTGAGACATTACTGT+GGG + chr3_2:68356083-68356102 None:intergenic 30.0%
! CAAATACAATATGAGGCTTT+TGG + chr3_2:68356151-68356170 None:intergenic 30.0%
ATGGTCTCAAATTGAAAATC+AGG + chr3_2:68356323-68356342 None:intergenic 30.0%
ATACAAGTAACTGGAATATG+AGG + chr3_2:68356470-68356489 None:intergenic 30.0%
TCAGCAATTATACAAGTAAC+TGG + chr3_2:68356479-68356498 None:intergenic 30.0%
GTTACTTGTATAATTGCTGA+TGG - chr3_2:68356479-68356498 Msa0420080:CDS 30.0%
! GGAATATACTTAGGTACTTT+TGG + chr3_2:68357001-68357020 None:intergenic 30.0%
!! CTACTTATTGACTCGTTTAT+TGG + chr3_2:68357158-68357177 None:intergenic 30.0%
TTAACGATTAGAATATGCCT+CGG + chr3_2:68357556-68357575 None:intergenic 30.0%
!!! ACTATTTTTGGAGCTTGATA+TGG - chr3_2:68357821-68357840 Msa0420080:intron 30.0%
ACAAAATTGTGTGAGATCAT+CGG - chr3_2:68358344-68358363 Msa0420080:intron 30.0%
AACCCTAACATATATAGCAT+TGG - chr3_2:68358429-68358448 Msa0420080:intron 30.0%
! CATTTTCCTGAGAAAGAATA+CGG - chr3_2:68358474-68358493 Msa0420080:intron 30.0%
ATGACTCAGAATGCATAAAA+TGG - chr3_2:68358529-68358548 Msa0420080:intron 30.0%
GCATAAAATGGTTGAGTAAA+TGG - chr3_2:68358541-68358560 Msa0420080:intron 30.0%
! ATCACTTGAAAGAATTTGCT+TGG - chr3_2:68358619-68358638 Msa0420080:intron 30.0%
! TCACTTGAAAGAATTTGCTT+GGG - chr3_2:68358620-68358639 Msa0420080:intron 30.0%
ACTTCATCTAGAAAATCTTG+TGG + chr3_2:68358723-68358742 None:intergenic 30.0%
! AGATTTTCTAGATGAAGTCA+AGG - chr3_2:68358725-68358744 Msa0420080:intron 30.0%
ATAGAGGATACATAACAAGT+TGG - chr3_2:68358748-68358767 Msa0420080:intron 30.0%
! CATGTTGACTATTCTGAATT+TGG - chr3_2:68359232-68359251 Msa0420080:CDS 30.0%
! TAATTTTCAACTGTATGGAC+AGG - chr3_2:68359303-68359322 Msa0420080:CDS 30.0%
GATTGCTCATTTGATTGATT+TGG - chr3_2:68359401-68359420 Msa0420080:CDS 30.0%
! CTTTTCTTGAGACATTACTG+TGG + chr3_2:68356084-68356103 None:intergenic 35.0%
!! TTTTGGCTATGACTATTAGG+AGG + chr3_2:68356134-68356153 None:intergenic 35.0%
GTTGAATTCAGTGTTCACAA+AGG + chr3_2:68356252-68356271 None:intergenic 35.0%
TGAATTCAACCACAAACGTT+TGG - chr3_2:68356262-68356281 Msa0420080:three_prime_UTR 35.0%
AAACGTTTGGTAAAGTCTCT+TGG - chr3_2:68356275-68356294 Msa0420080:three_prime_UTR 35.0%
GTTGCATCTTTATCTGATTC+TGG + chr3_2:68356359-68356378 None:intergenic 35.0%
CTAGTTGAATCACACAACAT+TGG + chr3_2:68356392-68356411 None:intergenic 35.0%
CAATGTTGTGTGATTCAACT+AGG - chr3_2:68356390-68356409 Msa0420080:exon 35.0%
TTAATCACGAGCTCTTTGAA+AGG + chr3_2:68356431-68356450 None:intergenic 35.0%
AGAGGAATTCTTCCATTCAA+AGG - chr3_2:68356617-68356636 Msa0420080:CDS 35.0%
TATGAATCTGACGTACAGAT+CGG + chr3_2:68356872-68356891 None:intergenic 35.0%
!! TAAGTAGTGGGCCAATAAAT+GGG - chr3_2:68357115-68357134 Msa0420080:CDS 35.0%
AGTTCAAATCGGATTCTTTG+TGG - chr3_2:68357176-68357195 Msa0420080:CDS 35.0%
! ACTACATTTTTGTTGGTCCT+TGG + chr3_2:68357337-68357356 None:intergenic 35.0%
AAGGACCAACAAAAATGTAG+TGG - chr3_2:68357336-68357355 Msa0420080:intron 35.0%
AGGACCAACAAAAATGTAGT+GGG - chr3_2:68357337-68357356 Msa0420080:intron 35.0%
TGGTTTAGAAGAGTTAGTCA+AGG + chr3_2:68357437-68357456 None:intergenic 35.0%
ATGTTAGCAAACTTCTCCAA+CGG - chr3_2:68357475-68357494 Msa0420080:intron 35.0%
TAACGTTATGATTCATCCGT+TGG + chr3_2:68357494-68357513 None:intergenic 35.0%
!!! TTTTGGAGCTTGATATGGTA+AGG - chr3_2:68357826-68357845 Msa0420080:intron 35.0%
! GATGAAAATTTTGTTGCCGA+TGG - chr3_2:68358198-68358217 Msa0420080:intron 35.0%
CCAATCTAAACTTGTATCCA+AGG + chr3_2:68358226-68358245 None:intergenic 35.0%
CCTTGGATACAAGTTTAGAT+TGG - chr3_2:68358223-68358242 Msa0420080:intron 35.0%
ACAAGTTTAGATTGGATCTC+TGG - chr3_2:68358231-68358250 Msa0420080:intron 35.0%
! GATGATCTCACACAATTTTG+TGG + chr3_2:68358345-68358364 None:intergenic 35.0%
GGCCAATGCTATATATGTTA+GGG + chr3_2:68358434-68358453 None:intergenic 35.0%
! CACTTGAAAGAATTTGCTTG+GGG - chr3_2:68358621-68358640 Msa0420080:intron 35.0%
GGCCTCATTATCCATAAAAA+TGG + chr3_2:68358666-68358685 None:intergenic 35.0%
AATGAGGCCAGATATAGTAA+TGG - chr3_2:68358677-68358696 Msa0420080:intron 35.0%
ATGAGGCCAGATATAGTAAT+GGG - chr3_2:68358678-68358697 Msa0420080:intron 35.0%
TCTTCACCCATTACTATATC+TGG + chr3_2:68358687-68358706 None:intergenic 35.0%
AATTCCAACCACAATGAGTT+AGG + chr3_2:68358818-68358837 None:intergenic 35.0%
ACACTTGAAGCAATTTCTTC+AGG - chr3_2:68358840-68358859 Msa0420080:intron 35.0%
AAGAAAGGCCAACAAATAGT+AGG + chr3_2:68358870-68358889 None:intergenic 35.0%
CTGAGCAACAAACAAATTGT+AGG - chr3_2:68358892-68358911 Msa0420080:intron 35.0%
GTAGGTATTTATGCAACACT+TGG - chr3_2:68358910-68358929 Msa0420080:CDS 35.0%
TTATGCAACACTTGGAGAAT+AGG - chr3_2:68358918-68358937 Msa0420080:CDS 35.0%
AGAGATAACAGAACTTGTGA+TGG - chr3_2:68358971-68358990 Msa0420080:CDS 35.0%
! AGAACTTGTGATGGAAATGA+TGG - chr3_2:68358980-68358999 Msa0420080:CDS 35.0%
! GAAATGATGGAAGGAGAAAA+AGG - chr3_2:68358993-68359012 Msa0420080:CDS 35.0%
! GTCAACATGACATTGATTGA+TGG + chr3_2:68359221-68359240 None:intergenic 35.0%
GTATGGACAGGAAAATATTG+TGG - chr3_2:68359315-68359334 Msa0420080:CDS 35.0%
TATTGTGGTTCTTGTTGACA+AGG - chr3_2:68359330-68359349 Msa0420080:CDS 35.0%
CAATCAAATGAGCAATCCAA+AGG + chr3_2:68359398-68359417 None:intergenic 35.0%
!! GGCTTTTGGCTATGACTATT+AGG + chr3_2:68356137-68356156 None:intergenic 40.0%
TTTGTACCATTTCCAGCACA+AGG - chr3_2:68356167-68356186 Msa0420080:three_prime_UTR 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG + chr3_2:68356202-68356221 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG + chr3_2:68356203-68356222 None:intergenic 40.0%
ACCATTACAACGTAGGAGTT+TGG + chr3_2:68356219-68356238 None:intergenic 40.0%
TGTGGAAACCATTACAACGT+AGG + chr3_2:68356226-68356245 None:intergenic 40.0%
CAGTGTTCACAAAGGTTATG+TGG + chr3_2:68356244-68356263 None:intergenic 40.0%
GAGACTTTACCAAACGTTTG+TGG + chr3_2:68356274-68356293 None:intergenic 40.0%
! TCTTGGAGCTGACTTTGTTA+AGG - chr3_2:68356292-68356311 Msa0420080:three_prime_UTR 40.0%
! CTTGGAGCTGACTTTGTTAA+GGG - chr3_2:68356293-68356312 Msa0420080:three_prime_UTR 40.0%
! CAATTTGAGACCATACCTGA+TGG - chr3_2:68356329-68356348 Msa0420080:three_prime_UTR 40.0%
TTCTGGTAAACCATCAGGTA+TGG + chr3_2:68356342-68356361 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG + chr3_2:68356347-68356366 None:intergenic 40.0%
GATGGCAATTATGACTTTGC+TGG - chr3_2:68356497-68356516 Msa0420080:CDS 40.0%
TTATGACTTTGCTGGAAGAG+TGG - chr3_2:68356505-68356524 Msa0420080:CDS 40.0%
AAGTAGAAGCTGTCCAAAGT+TGG + chr3_2:68356556-68356575 None:intergenic 40.0%
TTTGGACAGCTTCTACTTGT+GGG - chr3_2:68356558-68356577 Msa0420080:CDS 40.0%
ACTACTTACTAATAGGGGTG+TGG + chr3_2:68357103-68357122 None:intergenic 40.0%
ACACCCCTATTAGTAAGTAG+TGG - chr3_2:68357102-68357121 Msa0420080:CDS 40.0%
CACCCCTATTAGTAAGTAGT+GGG - chr3_2:68357103-68357122 Msa0420080:CDS 40.0%
TGGCCCACTACTTACTAATA+GGG + chr3_2:68357109-68357128 None:intergenic 40.0%
TTGGCCCACTACTTACTAAT+AGG + chr3_2:68357110-68357129 None:intergenic 40.0%
!! GTAAGTAGTGGGCCAATAAA+TGG - chr3_2:68357114-68357133 Msa0420080:CDS 40.0%
CCAGTGTCTATCCCATTTAT+TGG + chr3_2:68357129-68357148 None:intergenic 40.0%
CCAATAAATGGGATAGACAC+TGG - chr3_2:68357126-68357145 Msa0420080:CDS 40.0%
TTCATGGTCATTGAGTCACA+TGG - chr3_2:68357224-68357243 Msa0420080:CDS 40.0%
!! ATTTTGACGGATGCCAATCA+TGG - chr3_2:68357288-68357307 Msa0420080:CDS 40.0%
GTTTAGAAGAGCTAATAGCG+TGG + chr3_2:68357406-68357425 None:intergenic 40.0%
AGAGTTAGTCAAGGCAATCT+TGG + chr3_2:68357428-68357447 None:intergenic 40.0%
TGAAAATGACATTAGCACCG+AGG - chr3_2:68357536-68357555 Msa0420080:intron 40.0%
ATGCGATATGTGCACTGTTT+AGG - chr3_2:68357575-68357594 Msa0420080:intron 40.0%
ACGAAACTGGATTATGTGGA+CGG + chr3_2:68357891-68357910 None:intergenic 40.0%
ACAGACGAAACTGGATTATG+TGG + chr3_2:68357895-68357914 None:intergenic 40.0%
TTAGGTCTAACAGACGAAAC+TGG + chr3_2:68357904-68357923 None:intergenic 40.0%
TCTACAATCGATCATGTGTG+TGG + chr3_2:68358098-68358117 None:intergenic 40.0%
!!! GTTAGGGTTTTTAGCCCTAA+GGG + chr3_2:68358418-68358437 None:intergenic 40.0%
!!! TGTTAGGGTTTTTAGCCCTA+AGG + chr3_2:68358419-68358438 None:intergenic 40.0%
GGGCCAATGCTATATATGTT+AGG + chr3_2:68358435-68358454 None:intergenic 40.0%
GCAAAACCGTATTCTTTCTC+AGG + chr3_2:68358483-68358502 None:intergenic 40.0%
!! CAGCAAGTGGTTCAAGTTTT+TGG - chr3_2:68358502-68358521 Msa0420080:intron 40.0%
CTAGATGAAGTCAAGGATAG+AGG - chr3_2:68358732-68358751 Msa0420080:intron 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG + chr3_2:68358885-68358904 None:intergenic 40.0%
CAACACTTGGAGAATAGGAA+TGG - chr3_2:68358923-68358942 Msa0420080:CDS 40.0%
! CTTGTGATGGAAATGATGGA+AGG - chr3_2:68358984-68359003 Msa0420080:CDS 40.0%
AGAGATGAGACAAAACTGCT+TGG - chr3_2:68359019-68359038 Msa0420080:CDS 40.0%
AGCTACAGATGCTACTAATG+TGG - chr3_2:68359055-68359074 Msa0420080:CDS 40.0%
GCTACAGATGCTACTAATGT+GGG - chr3_2:68359056-68359075 Msa0420080:CDS 40.0%
CTATGACTATTAGGAGGTGG+AGG + chr3_2:68356128-68356147 None:intergenic 45.0%
TGGCTATGACTATTAGGAGG+TGG + chr3_2:68356131-68356150 None:intergenic 45.0%
ACATGACCTTGTGCTGGAAA+TGG + chr3_2:68356176-68356195 None:intergenic 45.0%
GCCAAACTCCTACGTTGTAA+TGG - chr3_2:68356215-68356234 Msa0420080:three_prime_UTR 45.0%
TGGAAGAGTGGCTAAGGATT+TGG - chr3_2:68356517-68356536 Msa0420080:CDS 45.0%
GGAAGAGTGGCTAAGGATTT+GGG - chr3_2:68356518-68356537 Msa0420080:CDS 45.0%
GCATTCGAGAGATCCAACTT+TGG - chr3_2:68356540-68356559 Msa0420080:CDS 45.0%
CTTTGGACAGCTTCTACTTG+TGG - chr3_2:68356557-68356576 Msa0420080:CDS 45.0%
AGCTTCTACTTGTGGGTTTG+TGG - chr3_2:68356565-68356584 Msa0420080:CDS 45.0%
GCTTCTACTTGTGGGTTTGT+GGG - chr3_2:68356566-68356585 Msa0420080:CDS 45.0%
CTTCTACTTGTGGGTTTGTG+GGG - chr3_2:68356567-68356586 Msa0420080:CDS 45.0%
! TGTGGGGTATTTGCAATTCG+AGG - chr3_2:68356583-68356602 Msa0420080:CDS 45.0%
TTCGAGGAGCTTGTCAAAAG+AGG - chr3_2:68356599-68356618 Msa0420080:CDS 45.0%
GGCCCACTACTTACTAATAG+GGG + chr3_2:68357108-68357127 None:intergenic 45.0%
GCAAGTGACAACTGTGTCTA+GGG + chr3_2:68357315-68357334 None:intergenic 45.0%
! CGTGCCCACTACATTTTTGT+TGG + chr3_2:68357344-68357363 None:intergenic 45.0%
CAGAGAGAGAGAGAGAAGAT+TGG - chr3_2:68357378-68357397 Msa0420080:intron 45.0%
ATTTGCATACACTGTCAGCG+TGG - chr3_2:68357994-68358013 Msa0420080:intron 45.0%
! ACTTGTATCCAAGGTGCCAT+CGG + chr3_2:68358217-68358236 None:intergenic 45.0%
TGACTCTGATGAAGCTTGGA+AGG + chr3_2:68358281-68358300 None:intergenic 45.0%
TCAGTGACTCTGATGAAGCT+TGG + chr3_2:68358285-68358304 None:intergenic 45.0%
TGAATCCCTTGACACCCTTA+GGG - chr3_2:68358401-68358420 Msa0420080:intron 45.0%
!! TTTAGCCCTAAGGGTGTCAA+GGG + chr3_2:68358409-68358428 None:intergenic 45.0%
!!! TTTTAGCCCTAAGGGTGTCA+AGG + chr3_2:68358410-68358429 None:intergenic 45.0%
! GAATACGGTTTTGCAGCAAG+TGG - chr3_2:68358489-68358508 Msa0420080:intron 45.0%
TTGCTCATCCATCAGTTGGA+GGG - chr3_2:68358790-68358809 Msa0420080:intron 45.0%
GGTTCCTAACTCATTGTGGT+TGG - chr3_2:68358811-68358830 Msa0420080:intron 45.0%
CAGGTCTGCCTACTATTTGT+TGG - chr3_2:68358859-68358878 Msa0420080:intron 45.0%
TGAGACAAAACTGCTTGGAG+TGG - chr3_2:68359024-68359043 Msa0420080:CDS 45.0%
ACAGATGCTACTAATGTGGG+AGG - chr3_2:68359059-68359078 Msa0420080:CDS 45.0%
!!! TAAATAACTAAATTATTTTT+TGG + chr3_2:68357022-68357041 None:intergenic 5.0%
!!! AAAATATATATTACTATTTT+TGG - chr3_2:68357809-68357828 Msa0420080:intron 5.0%
CTTTGCTGGAAGAGTGGCTA+AGG - chr3_2:68356511-68356530 Msa0420080:CDS 50.0%
! CTGTGTCTAGGGTCCATGAT+TGG + chr3_2:68357304-68357323 None:intergenic 50.0%
GGCAAGTGACAACTGTGTCT+AGG + chr3_2:68357316-68357335 None:intergenic 50.0%
! GACACAGTTGTCACTTGCCA+AGG - chr3_2:68357317-68357336 Msa0420080:CDS 50.0%
! TTTTGTTGCCGATGGCACCT+TGG - chr3_2:68358206-68358225 Msa0420080:intron 50.0%
GTGAATCCCTTGACACCCTT+AGG - chr3_2:68358400-68358419 Msa0420080:intron 50.0%
ATTGGCCCACTTCACATGCT+TGG - chr3_2:68358447-68358466 Msa0420080:intron 50.0%
GCCTACCAAGCATGTGAAGT+GGG + chr3_2:68358455-68358474 None:intergenic 50.0%
TGCCTACCAAGCATGTGAAG+TGG + chr3_2:68358456-68358475 None:intergenic 50.0%
! CTGATGGATGAGCAAGCACT+TGG + chr3_2:68358785-68358804 None:intergenic 50.0%
GTGCTTGCTCATCCATCAGT+TGG - chr3_2:68358786-68358805 Msa0420080:intron 50.0%
CTTGCTCATCCATCAGTTGG+AGG - chr3_2:68358789-68358808 Msa0420080:intron 50.0%
GTTAGGAACCCTCCAACTGA+TGG + chr3_2:68358801-68358820 None:intergenic 50.0%
GGAGGGTTCCTAACTCATTG+TGG - chr3_2:68358807-68358826 Msa0420080:intron 50.0%
GGGTTCACATGACCTTGTGC+TGG + chr3_2:68356182-68356201 None:intergenic 55.0%
GCCCACTTCACATGCTTGGT+AGG - chr3_2:68358451-68358470 Msa0420080:intron 55.0%
Chromosome Type Strat End Strand Name
chr3_2 gene 68356076 68359461 68356076 ID=Msa0420080;Name=Msa0420080
chr3_2 mRNA 68356076 68359461 68356076 ID=Msa0420080-mRNA-1;Parent=Msa0420080;Name=Msa0420080-mRNA-1;_AED=0.31;_eAED=0.31;_QI=13|1|1|1|1|1|2|319|497
chr3_2 exon 68356076 68357338 68356076 ID=Msa0420080-mRNA-1:exon:16085;Parent=Msa0420080-mRNA-1
chr3_2 exon 68358899 68359461 68358899 ID=Msa0420080-mRNA-1:exon:16084;Parent=Msa0420080-mRNA-1
chr3_2 five_prime_UTR 68359449 68359461 68359449 ID=Msa0420080-mRNA-1:five_prime_utr;Parent=Msa0420080-mRNA-1
chr3_2 CDS 68358899 68359448 68358899 ID=Msa0420080-mRNA-1:cds;Parent=Msa0420080-mRNA-1
chr3_2 CDS 68356395 68357338 68356395 ID=Msa0420080-mRNA-1:cds;Parent=Msa0420080-mRNA-1
chr3_2 three_prime_UTR 68356076 68356394 68356076 ID=Msa0420080-mRNA-1:three_prime_utr;Parent=Msa0420080-mRNA-1
Gene Sequence

>Msa0420080

ATGTCTCAAGAAAAGCAAAATAAAATAGAGTATACTCCTCCACCTCCTAATAGTCATAGCCAAAAGCCTCATATTGTATTTGTACCATTTCCAGCACAAGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCCTACGTTGTAATGGTTTCCACATAACCTTTGTGAACACTGAATTCAACCACAAACGTTTGGTAAAGTCTCTTGGAGCTGACTTTGTTAAGGGTCTACCTGATTTTCAATTTGAGACCATACCTGATGGTTTACCAGAATCAGATAAAGATGCAACACAAGATATTCCAATGTTGTGTGATTCAACTAGGAAAAATTGTTATGCTCCTTTCAAAGAGCTCGTGATTAAGCTCAACACTTCATCACCTCATATTCCAGTTACTTGTATAATTGCTGATGGCAATTATGACTTTGCTGGAAGAGTGGCTAAGGATTTGGGCATTCGAGAGATCCAACTTTGGACAGCTTCTACTTGTGGGTTTGTGGGGTATTTGCAATTCGAGGAGCTTGTCAAAAGAGGAATTCTTCCATTCAAAGATGAAAATTTTGTTGCCGATGGCACCTTGGATACAAGTTTAGATTGGATCTCTGGAATAAAAGATATCAGATTGAAAGACCTTCCAAGCTTCATCAGAGTCACTGATCTAAATGATATTATGTTTGATTTCTTTTGTGTTGAGCCACAAAATTGTGTGAGATCATCGGCAATCATCATTAACACATTTGAAGAATTAGAAGGTGAATCCCTTGACACCCTTAGGGCTAAAAACCCTAACATATATAGCATTGGCCCACTTCACATGCTTGGTAGGCATTTTCCTGAGAAAGAATACGGTTTTGCAGCAAGTGGTTCAAGTTTTTGGAAAAATGACTCAGAATGCATAAAATGGTTGAGTAAATGGGAACCTTGCTCAGTACTATATATTAATTATGGAAGTATAACTGTTATGACATATCATCACTTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAGTTACCATTTTTATGGATAATGAGGCCAGATATAGTAATGGGTGAAGAAACTTCAACTTTGCCACAAGATTTTCTAGATGAAGTCAAGGATAGAGGATACATAACAAGTTGGTGCATGCAAGACCAAGTGCTTGCTCATCCATCAGTTGGAGGGTTCCTAACTCATTGTGGTTGGAATTCTACACTTGAAGCAATTTCTTCAGGTCTGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAACACTTGGAGAATAGGAATGGAAATTAACTATGATGTGAAAAGGGAAGAGATAACAGAACTTGTGATGGAAATGATGGAAGGAGAAAAAGGAAAAGAGATGAGACAAAACTGCTTGGAGTGGAAGAAGAAAGCTACAGATGCTACTAATGTGGGAGGATCATCATACAATAATTTCTATAATTTAATTAAAGAGCTTCTTCATCACAATGCTATTTGA

Protein sequence

>Msa0420080

MSQEKQNKIEYTPPPPNSHSQKPHIVFVPFPAQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLVKSLGADFVKGLPDFQFETIPDGLPESDKDATQDIPMLCDSTRKNCYAPFKELVIKLNTSSPHIPVTCIIADGNYDFAGRVAKDLGIREIQLWTASTCGFVGYLQFEELVKRGILPFKDENFVADGTLDTSLDWISGIKDIRLKDLPSFIRVTDLNDIMFDFFCVEPQNCVRSSAIIINTFEELEGESLDTLRAKNPNIYSIGPLHMLGRHFPEKEYGFAASGSSFWKNDSECIKWLSKWEPCSVLYINYGSITVMTYHHLKEFAWGIANSKLPFLWIMRPDIVMGEETSTLPQDFLDEVKDRGYITSWCMQDQVLAHPSVGGFLTHCGWNSTLEAISSGLPTICWPFFAEQQTNCRYLCNTWRIGMEINYDVKREEITELVMEMMEGEKGKEMRQNCLEWKKKATDATNVGGSSYNNFYNLIKELLHHNAI*