Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226530 | XP_003597864.1 | 96.481 | 341 | 12 | 0 | 127 | 467 | 59 | 399 | 0.0 | 687 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226530 | sp|Q94AJ5|PGLR5_ARATH | 60.563 | 355 | 139 | 1 | 113 | 466 | 38 | 392 | 3.06e-163 | 471 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226530 | Q2HVV9 | 96.481 | 341 | 12 | 0 | 127 | 467 | 59 | 399 | 0.0 | 687 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011960 | Msa0226530 | 0.802711 | 4.928855e-49 | -8.615850e-47 |
| Msa0014710 | Msa0226530 | 0.815096 | 1.101203e-51 | -8.615850e-47 |
| Msa0032880 | Msa0226530 | 0.804957 | 1.683605e-49 | -8.615850e-47 |
| Msa0078900 | Msa0226530 | 0.809183 | 2.146044e-50 | -8.615850e-47 |
| Msa0140860 | Msa0226530 | 0.801182 | 1.016039e-48 | -8.615850e-47 |
| Msa0171540 | Msa0226530 | 0.821733 | 3.451373e-53 | -8.615850e-47 |
| Msa0187230 | Msa0226530 | 0.816606 | 5.071834e-52 | -8.615850e-47 |
| Msa0197660 | Msa0226530 | 0.827947 | 1.180786e-54 | -8.615850e-47 |
| Msa0206790 | Msa0226530 | 0.808272 | 3.360273e-50 | -8.615850e-47 |
| Msa0223410 | Msa0226530 | -0.822863 | 1.886221e-53 | -8.615850e-47 |
| Msa0224320 | Msa0226530 | 0.804428 | 2.170504e-49 | -8.615850e-47 |
| Msa0226530 | Msa0226890 | 0.813019 | 3.163941e-51 | -8.615850e-47 |
| Msa0226530 | Msa0239800 | 0.829965 | 3.831595e-55 | -8.615850e-47 |
| Msa0226530 | Msa0249560 | 0.805648 | 1.206234e-49 | -8.615850e-47 |
| Msa0226530 | Msa0265380 | 0.815888 | 7.339956e-52 | -8.615850e-47 |
| Msa0226530 | Msa0268090 | 0.824410 | 8.195202e-54 | -8.615850e-47 |
| Msa0226530 | Msa0277820 | 0.801891 | 7.269197e-49 | -8.615850e-47 |
| Msa0226530 | Msa0288100 | 0.811103 | 8.275749e-51 | -8.615850e-47 |
| Msa0226530 | Msa0303360 | 0.807565 | 4.751636e-50 | -8.615850e-47 |
| Msa0226530 | Msa0317510 | 0.825826 | 3.792409e-54 | -8.615850e-47 |
| Msa0226530 | Msa0326520 | 0.807351 | 5.274381e-50 | -8.615850e-47 |
| Msa0226530 | Msa0344690 | -0.805041 | 1.616385e-49 | -8.615850e-47 |
| Msa0226530 | Msa0380890 | 0.804455 | 2.142737e-49 | -8.615850e-47 |
| Msa0226530 | Msa0392040 | -0.803864 | 2.843770e-49 | -8.615850e-47 |
| Msa0226530 | Msa0412840 | 0.802830 | 4.658050e-49 | -8.615850e-47 |
| Msa0226530 | Msa0430790 | 0.802612 | 5.166226e-49 | -8.615850e-47 |
| Msa0226530 | Msa0434180 | 0.804462 | 2.135365e-49 | -8.615850e-47 |
| Msa0226530 | Msa0469940 | -0.804263 | 2.348845e-49 | -8.615850e-47 |
| Msa0226530 | Msa0473240 | 0.809448 | 1.882992e-50 | -8.615850e-47 |
| Msa0226530 | Msa0477130 | -0.801328 | 9.482299e-49 | -8.615850e-47 |
| Msa0226530 | Msa0483850 | 0.809367 | 1.960023e-50 | -8.615850e-47 |
| Msa0226530 | Msa0484780 | 0.803419 | 3.517533e-49 | -8.615850e-47 |
| Msa0226530 | Msa0512750 | 0.806225 | 9.123377e-50 | -8.615850e-47 |
| Msa0226530 | Msa0517490 | 0.800794 | 1.219628e-48 | -8.615850e-47 |
| Msa0226530 | Msa0558690 | 0.821024 | 5.031287e-53 | -8.615850e-47 |
| Msa0226530 | Msa0585230 | 0.809871 | 1.527545e-50 | -8.615850e-47 |
| Msa0226530 | Msa0610430 | 0.817360 | 3.433590e-52 | -8.615850e-47 |
| Msa0226530 | Msa0613460 | 0.805814 | 1.113006e-49 | -8.615850e-47 |
| Msa0226530 | Msa0620960 | 0.812783 | 3.562913e-51 | -8.615850e-47 |
| Msa0226530 | Msa0626090 | 0.805294 | 1.430718e-49 | -8.615850e-47 |
| Msa0226530 | Msa0654010 | 0.805136 | 1.543942e-49 | -8.615850e-47 |
| Msa0226530 | Msa0658570 | 0.809940 | 1.475998e-50 | -8.615850e-47 |
| Msa0226530 | Msa0663920 | 0.804148 | 2.482235e-49 | -8.615850e-47 |
| Msa0226530 | Msa0692830 | 0.800334 | 1.512935e-48 | -8.615850e-47 |
| Msa0226530 | Msa0693380 | 0.819427 | 1.168183e-52 | -8.615850e-47 |
| Msa0226530 | Msa0711790 | 0.819074 | 1.406028e-52 | -8.615850e-47 |
| Msa0226530 | Msa0716840 | 0.808623 | 2.828523e-50 | -8.615850e-47 |
| Msa0226530 | Msa0723110 | 0.818399 | 2.000314e-52 | -8.615850e-47 |
| Msa0226530 | Msa0747270 | 0.819202 | 1.314522e-52 | -8.615850e-47 |
| Msa0226530 | Msa0777230 | 0.801719 | 7.884004e-49 | -8.615850e-47 |
| Msa0226530 | Msa0820850 | 0.804588 | 2.009854e-49 | -8.615850e-47 |
| Msa0226530 | Msa0843250 | 0.802685 | 4.989933e-49 | -8.615850e-47 |
| Msa0226530 | Msa0857640 | 0.850967 | 1.205757e-60 | -8.615850e-47 |
| Msa0226530 | Msa0861130 | 0.805945 | 1.044817e-49 | -8.615850e-47 |
| Msa0226530 | Msa0864470 | -0.802532 | 5.365538e-49 | -8.615850e-47 |
| Msa0226530 | Msa0922410 | 0.800319 | 1.523744e-48 | -8.615850e-47 |
| Msa0226530 | Msa0942550 | -0.800516 | 1.389497e-48 | -8.615850e-47 |
| Msa0226530 | Msa0942560 | -0.806756 | 7.048138e-50 | -8.615850e-47 |
| Msa0226530 | Msa0973100 | 0.808875 | 2.498611e-50 | -8.615850e-47 |
| Msa0226530 | Msa0976670 | 0.807284 | 5.449627e-50 | -8.615850e-47 |
| Msa0226530 | Msa0982270 | 0.806119 | 9.601002e-50 | -8.615850e-47 |
| Msa0226530 | Msa0993290 | 0.807467 | 4.984342e-50 | -8.615850e-47 |
| Msa0226530 | Msa0993600 | 0.806745 | 7.085898e-50 | -8.615850e-47 |
| Msa0226530 | Msa1003620 | 0.829309 | 5.532967e-55 | -8.615850e-47 |
| Msa0226530 | Msa1012830 | 0.819311 | 1.241204e-52 | -8.615850e-47 |
| Msa0226530 | Msa1014540 | 0.818864 | 1.569132e-52 | -8.615850e-47 |
| Msa0226530 | Msa1046460 | 0.820785 | 5.710139e-53 | -8.615850e-47 |
| Msa0226530 | Msa1061680 | 0.805272 | 1.446412e-49 | -8.615850e-47 |
| Msa0226530 | Msa1075220 | -0.819722 | 1.000626e-52 | -8.615850e-47 |
| Msa0226530 | Msa1075540 | 0.814496 | 1.495948e-51 | -8.615850e-47 |
| Msa0226530 | Msa1082500 | 0.814411 | 1.562031e-51 | -8.615850e-47 |
| Msa0226530 | Msa1085300 | 0.823323 | 1.473438e-53 | -8.615850e-47 |
| Msa0226530 | Msa1085920 | 0.806316 | 8.726076e-50 | -8.615850e-47 |
| Msa0226530 | Msa1116130 | -0.809395 | 1.932658e-50 | -8.615850e-47 |
| Msa0226530 | Msa1124540 | -0.832728 | 8.009693e-56 | -8.615850e-47 |
| Msa0226530 | Msa1131220 | 0.803675 | 3.113289e-49 | -8.615850e-47 |
| Msa0226530 | Msa1144720 | -0.812320 | 4.499532e-51 | -8.615850e-47 |
| Msa0226530 | Msa1154280 | 0.801018 | 1.097387e-48 | -8.615850e-47 |
| Msa0226530 | Msa1219810 | 0.805138 | 1.543070e-49 | -8.615850e-47 |
| Msa0226530 | Msa1233890 | 0.819719 | 1.002091e-52 | -8.615850e-47 |
| Msa0226530 | Msa1238930 | 0.816898 | 4.360473e-52 | -8.615850e-47 |
| Msa0226530 | Msa1267060 | 0.839043 | 2.006006e-57 | -8.615850e-47 |
| Msa0226530 | Msa1277660 | 0.823474 | 1.358834e-53 | -8.615850e-47 |
| Msa0226530 | Msa1282580 | -0.821795 | 3.339567e-53 | -8.615850e-47 |
| Msa0226530 | Msa1287460 | 0.820110 | 8.153750e-53 | -8.615850e-47 |
| Msa0226530 | Msa1305190 | 0.804633 | 1.966842e-49 | -8.615850e-47 |
| Msa0226530 | Msa1305200 | 0.804771 | 1.840809e-49 | -8.615850e-47 |
| Msa0226530 | Msa1305340 | 0.801685 | 8.013151e-49 | -8.615850e-47 |
| Msa0226530 | Msa1305350 | 0.802489 | 5.476367e-49 | -8.615850e-47 |
| Msa0226530 | Msa1306760 | 0.806067 | 9.846055e-50 | -8.615850e-47 |
| Msa0226530 | Msa1306850 | 0.800549 | 1.368197e-48 | -8.615850e-47 |
| Msa0226530 | Msa1372760 | 0.801257 | 9.805744e-49 | -8.615850e-47 |
| Msa0226530 | Msa1376890 | 0.819257 | 1.276815e-52 | -8.615850e-47 |
| Msa0226530 | Msa1401530 | 0.834608 | 2.716714e-56 | -8.615850e-47 |
| Msa0226530 | Msa1416150 | 0.801119 | 1.046481e-48 | -8.615850e-47 |
| Msa0226530 | Msa1419960 | 0.821676 | 3.556620e-53 | -8.615850e-47 |
| Msa0226530 | Msa1424450 | 0.817310 | 3.523359e-52 | -8.615850e-47 |
| Msa0226530 | Msa1451620 | -0.814264 | 1.683582e-51 | -8.615850e-47 |
| Msa0226530 | Msa1462070 | 0.827181 | 1.802569e-54 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226530 | MtrunA17_Chr2g0332801 | 96.481 | 341 | 12 | 0 | 127 | 467 | 59 | 399 | 0.0 | 687 |
| Msa0226530 | MtrunA17_Chr8g0365901 | 46.839 | 348 | 184 | 1 | 119 | 466 | 57 | 403 | 3.00e-110 | 333 |
| Msa0226530 | MtrunA17_Chr1g0173451 | 48.986 | 345 | 165 | 4 | 123 | 466 | 72 | 406 | 2.63e-109 | 331 |
| Msa0226530 | MtrunA17_Chr4g0020771 | 47.851 | 349 | 175 | 6 | 121 | 466 | 68 | 412 | 6.48e-108 | 327 |
| Msa0226530 | MtrunA17_Chr3g0089021 | 47.977 | 346 | 175 | 4 | 122 | 466 | 66 | 407 | 4.62e-99 | 304 |
| Msa0226530 | MtrunA17_Chr1g0194231 | 44.729 | 351 | 182 | 6 | 126 | 466 | 80 | 428 | 3.93e-93 | 290 |
| Msa0226530 | MtrunA17_Chr7g0270361 | 41.370 | 365 | 205 | 5 | 110 | 466 | 50 | 413 | 1.22e-91 | 286 |
| Msa0226530 | MtrunA17_Chr6g0449961 | 42.776 | 353 | 192 | 6 | 115 | 466 | 33 | 376 | 4.92e-91 | 283 |
| Msa0226530 | MtrunA17_Chr4g0052621 | 41.690 | 355 | 195 | 6 | 121 | 466 | 59 | 410 | 1.40e-88 | 278 |
| Msa0226530 | MtrunA17_Chr2g0332971 | 41.449 | 345 | 197 | 4 | 127 | 467 | 28 | 371 | 9.04e-88 | 274 |
| Msa0226530 | MtrunA17_Chr7g0257701 | 42.647 | 340 | 152 | 4 | 114 | 418 | 52 | 383 | 4.62e-82 | 259 |
| Msa0226530 | MtrunA17_Chr7g0257721 | 48.864 | 264 | 133 | 2 | 121 | 384 | 70 | 331 | 1.93e-81 | 255 |
| Msa0226530 | MtrunA17_Chr5g0413141 | 40.000 | 345 | 199 | 5 | 127 | 466 | 59 | 400 | 1.95e-81 | 259 |
| Msa0226530 | MtrunA17_Chr5g0418411 | 40.179 | 336 | 190 | 5 | 127 | 458 | 29 | 357 | 3.88e-81 | 256 |
| Msa0226530 | MtrunA17_Chr2g0303941 | 42.398 | 342 | 186 | 8 | 127 | 466 | 28 | 360 | 1.00e-80 | 255 |
| Msa0226530 | MtrunA17_Chr2g0332771 | 99.153 | 118 | 1 | 0 | 1 | 118 | 1 | 118 | 3.68e-80 | 244 |
| Msa0226530 | MtrunA17_Chr7g0273191 | 80.137 | 146 | 29 | 0 | 230 | 375 | 1 | 146 | 9.93e-80 | 244 |
| Msa0226530 | MtrunA17_Chr5g0413411 | 37.531 | 405 | 212 | 9 | 89 | 466 | 93 | 483 | 3.76e-79 | 255 |
| Msa0226530 | MtrunA17_Chr3g0121891 | 40.282 | 355 | 198 | 6 | 117 | 466 | 19 | 364 | 1.25e-78 | 250 |
| Msa0226530 | MtrunA17_Chr7g0230891 | 39.255 | 349 | 204 | 6 | 119 | 466 | 29 | 370 | 7.78e-78 | 248 |
| Msa0226530 | MtrunA17_Chr4g0067631 | 39.005 | 382 | 211 | 11 | 101 | 466 | 17 | 392 | 3.21e-77 | 247 |
| Msa0226530 | MtrunA17_Chr4g0043661 | 37.288 | 354 | 201 | 7 | 124 | 466 | 20 | 363 | 1.76e-76 | 244 |
| Msa0226530 | MtrunA17_Chr8g0365891 | 37.179 | 390 | 210 | 8 | 105 | 466 | 88 | 470 | 2.53e-76 | 248 |
| Msa0226530 | MtrunA17_Chr2g0293681 | 40.729 | 329 | 184 | 5 | 120 | 440 | 60 | 385 | 2.17e-74 | 240 |
| Msa0226530 | MtrunA17_Chr4g0043431 | 41.056 | 341 | 193 | 7 | 128 | 466 | 36 | 370 | 2.81e-74 | 239 |
| Msa0226530 | MtrunA17_Chr6g0461181 | 35.844 | 385 | 197 | 7 | 124 | 466 | 27 | 403 | 9.47e-74 | 238 |
| Msa0226530 | MtrunA17_Chr3g0121881 | 37.037 | 351 | 209 | 5 | 120 | 466 | 26 | 368 | 1.74e-72 | 234 |
| Msa0226530 | MtrunA17_Chr7g0228411 | 37.772 | 368 | 194 | 9 | 126 | 466 | 39 | 398 | 4.14e-70 | 229 |
| Msa0226530 | MtrunA17_Chr4g0018151 | 37.356 | 348 | 202 | 4 | 121 | 464 | 72 | 407 | 1.86e-69 | 228 |
| Msa0226530 | MtrunA17_Chr8g0337571 | 39.067 | 343 | 187 | 9 | 126 | 464 | 30 | 354 | 1.42e-68 | 224 |
| Msa0226530 | MtrunA17_Chr1g0150291 | 36.550 | 342 | 206 | 6 | 127 | 466 | 45 | 377 | 2.87e-67 | 221 |
| Msa0226530 | MtrunA17_Chr1g0150301 | 37.135 | 342 | 204 | 7 | 127 | 466 | 27 | 359 | 5.41e-67 | 219 |
| Msa0226530 | MtrunA17_Chr8g0337581 | 36.443 | 343 | 197 | 8 | 126 | 464 | 30 | 355 | 6.37e-67 | 219 |
| Msa0226530 | MtrunA17_Chr2g0307831 | 34.930 | 355 | 203 | 6 | 126 | 466 | 24 | 364 | 3.57e-65 | 216 |
| Msa0226530 | MtrunA17_Chr2g0307821 | 34.930 | 355 | 203 | 6 | 126 | 466 | 24 | 364 | 3.57e-65 | 216 |
| Msa0226530 | MtrunA17_Chr8g0348981 | 36.390 | 349 | 208 | 8 | 125 | 466 | 25 | 366 | 3.60e-65 | 215 |
| Msa0226530 | MtrunA17_Chr1g0195221 | 34.682 | 346 | 214 | 7 | 126 | 466 | 34 | 372 | 1.45e-62 | 208 |
| Msa0226530 | MtrunA17_Chr2g0307811 | 36.311 | 347 | 209 | 7 | 126 | 466 | 24 | 364 | 2.61e-62 | 208 |
| Msa0226530 | MtrunA17_Chr2g0295451 | 39.057 | 297 | 170 | 6 | 124 | 414 | 50 | 341 | 5.29e-61 | 204 |
| Msa0226530 | MtrunA17_Chr3g0100091 | 40.493 | 284 | 147 | 4 | 189 | 466 | 48 | 315 | 7.37e-60 | 200 |
| Msa0226530 | MtrunA17_Chr2g0291841 | 37.540 | 309 | 182 | 8 | 162 | 466 | 31 | 332 | 1.51e-59 | 199 |
| Msa0226530 | MtrunA17_Chr5g0425811 | 38.163 | 283 | 160 | 6 | 144 | 422 | 2 | 273 | 1.95e-56 | 188 |
| Msa0226530 | MtrunA17_Chr5g0447901 | 35.254 | 295 | 181 | 7 | 125 | 415 | 23 | 311 | 3.27e-55 | 187 |
| Msa0226530 | MtrunA17_Chr8g0336481 | 38.060 | 268 | 150 | 4 | 187 | 452 | 14 | 267 | 9.32e-54 | 181 |
| Msa0226530 | MtrunA17_Chr1g0149241 | 33.908 | 348 | 184 | 11 | 123 | 466 | 24 | 329 | 6.63e-53 | 182 |
| Msa0226530 | MtrunA17_Chr3g0093011 | 39.462 | 223 | 132 | 1 | 247 | 466 | 7 | 229 | 1.87e-52 | 177 |
| Msa0226530 | MtrunA17_Chr8g0337511 | 45.327 | 214 | 110 | 3 | 253 | 466 | 4 | 210 | 8.38e-51 | 172 |
| Msa0226530 | MtrunA17_Chr8g0337601 | 42.453 | 212 | 114 | 3 | 254 | 464 | 2 | 206 | 2.28e-47 | 163 |
| Msa0226530 | MtrunA17_Chr8g0337521 | 37.405 | 262 | 142 | 7 | 126 | 383 | 30 | 273 | 2.23e-46 | 162 |
| Msa0226530 | MtrunA17_Chr8g0337351 | 47.879 | 165 | 85 | 1 | 270 | 433 | 7 | 171 | 1.24e-42 | 149 |
| Msa0226530 | MtrunA17_Chr4g0003631 | 61.017 | 118 | 34 | 2 | 1 | 118 | 1 | 106 | 3.21e-38 | 134 |
| Msa0226530 | MtrunA17_Chr7g0273181 | 86.567 | 67 | 9 | 0 | 401 | 467 | 1 | 67 | 5.48e-33 | 121 |
| Msa0226530 | MtrunA17_Chr8g0337551 | 46.094 | 128 | 69 | 0 | 256 | 383 | 7 | 134 | 2.51e-30 | 115 |
| Msa0226530 | MtrunA17_Chr3g0093021 | 37.313 | 134 | 78 | 3 | 117 | 249 | 17 | 145 | 1.70e-21 | 91.3 |
| Msa0226530 | MtrunA17_Chr5g0442221 | 27.100 | 369 | 213 | 12 | 112 | 445 | 36 | 383 | 1.23e-20 | 94.4 |
| Msa0226530 | MtrunA17_Chr4g0063471 | 43.548 | 124 | 41 | 5 | 1 | 118 | 1 | 101 | 2.93e-20 | 85.9 |
| Msa0226530 | MtrunA17_Chr3g0095221 | 28.528 | 326 | 178 | 13 | 112 | 403 | 39 | 343 | 1.65e-19 | 90.9 |
| Msa0226530 | MtrunA17_Chr4g0070281 | 26.781 | 351 | 207 | 13 | 126 | 440 | 74 | 410 | 3.92e-19 | 89.7 |
| Msa0226530 | MtrunA17_Chr2g0301091 | 25.464 | 377 | 230 | 15 | 126 | 466 | 55 | 416 | 6.70e-19 | 89.0 |
| Msa0226530 | MtrunA17_Chr7g0257711 | 48.235 | 85 | 43 | 1 | 384 | 467 | 1 | 85 | 1.65e-18 | 81.3 |
| Msa0226530 | MtrunA17_Chr7g0270821 | 30.000 | 330 | 178 | 14 | 127 | 420 | 43 | 355 | 1.35e-17 | 85.1 |
| Msa0226530 | MtrunA17_Chr8g0373171 | 46.429 | 84 | 45 | 0 | 254 | 337 | 7 | 90 | 2.62e-17 | 77.8 |
| Msa0226530 | MtrunA17_Chr4g0067811 | 29.572 | 257 | 156 | 8 | 225 | 466 | 153 | 399 | 1.73e-16 | 81.6 |
| Msa0226530 | MtrunA17_Chr1g0202641 | 27.734 | 256 | 162 | 8 | 225 | 466 | 168 | 414 | 3.24e-16 | 81.6 |
| Msa0226530 | MtrunA17_Chr1g0202641 | 23.760 | 383 | 241 | 13 | 103 | 448 | 526 | 894 | 2.06e-13 | 72.8 |
| Msa0226530 | MtrunA17_Chr8g0337541 | 34.848 | 132 | 78 | 5 | 113 | 239 | 16 | 144 | 3.49e-16 | 75.9 |
| Msa0226530 | MtrunA17_Chr7g0255311 | 29.319 | 191 | 119 | 4 | 225 | 404 | 176 | 361 | 4.18e-16 | 80.5 |
| Msa0226530 | MtrunA17_Chr1g0193961 | 27.011 | 348 | 206 | 12 | 127 | 440 | 43 | 376 | 6.21e-16 | 80.1 |
| Msa0226530 | MtrunA17_Chr3g0130251 | 26.007 | 273 | 174 | 7 | 211 | 466 | 174 | 435 | 3.98e-15 | 77.4 |
| Msa0226530 | MtrunA17_Chr1g0202651 | 26.562 | 256 | 165 | 8 | 225 | 466 | 168 | 414 | 6.11e-15 | 77.0 |
| Msa0226530 | MtrunA17_Chr8g0387391 | 24.437 | 311 | 188 | 12 | 128 | 404 | 45 | 342 | 3.58e-14 | 74.3 |
| Msa0226530 | MtrunA17_Chr7g0248451 | 23.925 | 372 | 237 | 12 | 128 | 466 | 56 | 414 | 3.75e-14 | 74.3 |
| Msa0226530 | MtrunA17_Chr2g0330221 | 27.419 | 186 | 126 | 6 | 117 | 301 | 16 | 193 | 4.10e-14 | 71.2 |
| Msa0226530 | MtrunA17_Chr1g0202621 | 25.839 | 298 | 172 | 12 | 129 | 394 | 50 | 330 | 4.69e-14 | 73.9 |
| Msa0226530 | MtrunA17_Chr7g0258111 | 24.277 | 346 | 211 | 12 | 127 | 442 | 48 | 372 | 1.61e-13 | 72.4 |
| Msa0226530 | MtrunA17_Chr8g0348491 | 26.339 | 224 | 145 | 6 | 225 | 435 | 168 | 384 | 1.56e-12 | 69.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0226530 | AT1G80170.1 | 60.563 | 355 | 139 | 1 | 113 | 466 | 38 | 392 | 3.11e-164 | 471 |
| Msa0226530 | AT1G80170.2 | 59.124 | 274 | 111 | 1 | 113 | 385 | 38 | 311 | 9.08e-121 | 356 |
| Msa0226530 | AT3G07970.1 | 50.725 | 345 | 166 | 3 | 123 | 466 | 67 | 408 | 4.18e-118 | 353 |
| Msa0226530 | AT2G41850.1 | 50.997 | 351 | 167 | 3 | 118 | 466 | 59 | 406 | 3.41e-116 | 348 |
| Msa0226530 | AT1G70500.1 | 45.690 | 348 | 188 | 1 | 119 | 466 | 59 | 405 | 8.09e-113 | 341 |
| Msa0226530 | AT3G57510.1 | 48.688 | 343 | 171 | 3 | 126 | 466 | 67 | 406 | 4.31e-111 | 335 |
| Msa0226530 | AT1G23460.2 | 46.552 | 348 | 185 | 1 | 119 | 466 | 35 | 381 | 1.01e-109 | 332 |
| Msa0226530 | AT1G23460.1 | 46.552 | 348 | 185 | 1 | 119 | 466 | 59 | 405 | 1.78e-109 | 332 |
| Msa0226530 | AT1G56710.1 | 45.299 | 351 | 180 | 5 | 126 | 466 | 47 | 395 | 1.33e-99 | 306 |
| Msa0226530 | AT3G15720.1 | 43.804 | 347 | 181 | 5 | 123 | 466 | 20 | 355 | 5.28e-92 | 287 |
| Msa0226530 | AT3G15720.3 | 43.804 | 347 | 181 | 5 | 123 | 466 | 19 | 354 | 6.43e-92 | 286 |
| Msa0226530 | AT1G02460.1 | 43.503 | 354 | 185 | 7 | 126 | 466 | 88 | 439 | 2.42e-89 | 281 |
| Msa0226530 | AT5G14650.1 | 41.761 | 352 | 197 | 7 | 116 | 466 | 40 | 384 | 4.65e-89 | 278 |
| Msa0226530 | AT3G15720.2 | 43.228 | 347 | 180 | 6 | 123 | 466 | 19 | 351 | 5.33e-89 | 279 |
| Msa0226530 | AT4G01890.1 | 43.243 | 370 | 188 | 12 | 114 | 466 | 51 | 415 | 2.83e-87 | 275 |
| Msa0226530 | AT2G43890.1 | 40.176 | 341 | 194 | 7 | 128 | 466 | 30 | 362 | 2.15e-86 | 270 |
| Msa0226530 | AT1G05660.1 | 40.000 | 345 | 199 | 6 | 123 | 466 | 24 | 361 | 2.48e-86 | 270 |
| Msa0226530 | AT1G05650.1 | 39.769 | 347 | 201 | 6 | 121 | 466 | 22 | 361 | 7.51e-86 | 269 |
| Msa0226530 | AT2G43870.1 | 43.182 | 352 | 188 | 8 | 117 | 466 | 14 | 355 | 4.32e-84 | 264 |
| Msa0226530 | AT1G48100.1 | 38.592 | 355 | 206 | 6 | 121 | 466 | 74 | 425 | 9.19e-84 | 266 |
| Msa0226530 | AT3G26610.1 | 39.037 | 374 | 209 | 6 | 109 | 466 | 36 | 406 | 4.73e-83 | 264 |
| Msa0226530 | AT4G35670.1 | 40.762 | 341 | 192 | 4 | 128 | 466 | 25 | 357 | 3.95e-81 | 257 |
| Msa0226530 | AT3G59850.1 | 41.279 | 344 | 194 | 6 | 125 | 466 | 21 | 358 | 8.08e-81 | 256 |
| Msa0226530 | AT3G59850.2 | 41.279 | 344 | 194 | 6 | 125 | 466 | 65 | 402 | 3.49e-80 | 255 |
| Msa0226530 | AT5G44840.1 | 38.081 | 344 | 204 | 4 | 125 | 466 | 22 | 358 | 4.26e-80 | 254 |
| Msa0226530 | AT5G27530.1 | 39.826 | 344 | 189 | 3 | 125 | 466 | 51 | 378 | 4.42e-80 | 256 |
| Msa0226530 | AT2G43880.1 | 40.176 | 341 | 196 | 6 | 127 | 466 | 31 | 364 | 2.55e-79 | 252 |
| Msa0226530 | AT5G17200.1 | 40.599 | 367 | 183 | 6 | 123 | 466 | 35 | 389 | 4.69e-79 | 252 |
| Msa0226530 | AT1G10640.1 | 40.379 | 369 | 189 | 8 | 125 | 466 | 117 | 481 | 4.89e-79 | 255 |
| Msa0226530 | AT1G60590.1 | 38.649 | 370 | 193 | 8 | 127 | 466 | 123 | 488 | 6.08e-78 | 253 |
| Msa0226530 | AT1G65570.1 | 38.617 | 347 | 204 | 7 | 123 | 466 | 27 | 367 | 4.28e-76 | 244 |
| Msa0226530 | AT2G43860.1 | 40.351 | 342 | 196 | 6 | 127 | 466 | 33 | 368 | 5.91e-76 | 244 |
| Msa0226530 | AT3G15720.4 | 43.189 | 301 | 157 | 5 | 169 | 466 | 2 | 291 | 9.62e-76 | 243 |
| Msa0226530 | AT1G78400.1 | 38.040 | 347 | 204 | 7 | 124 | 466 | 32 | 371 | 3.54e-73 | 236 |
| Msa0226530 | AT1G02790.1 | 38.109 | 349 | 203 | 6 | 119 | 466 | 44 | 380 | 1.61e-72 | 235 |
| Msa0226530 | AT4G18180.1 | 38.439 | 346 | 204 | 6 | 126 | 466 | 38 | 379 | 2.65e-71 | 232 |
| Msa0226530 | AT5G44830.1 | 38.033 | 305 | 171 | 3 | 163 | 466 | 12 | 299 | 1.94e-69 | 224 |
| Msa0226530 | AT3G07830.1 | 37.920 | 327 | 193 | 7 | 143 | 466 | 37 | 356 | 4.85e-68 | 223 |
| Msa0226530 | AT1G17150.1 | 36.994 | 346 | 207 | 7 | 125 | 466 | 31 | 369 | 1.64e-67 | 221 |
| Msa0226530 | AT5G48140.1 | 36.697 | 327 | 196 | 6 | 143 | 466 | 37 | 355 | 1.36e-66 | 219 |
| Msa0226530 | AT2G43880.2 | 40.134 | 299 | 171 | 6 | 127 | 424 | 31 | 322 | 2.85e-66 | 216 |
| Msa0226530 | AT3G07840.1 | 36.467 | 351 | 206 | 8 | 126 | 466 | 13 | 356 | 1.53e-65 | 216 |
| Msa0226530 | AT3G07820.1 | 37.003 | 327 | 196 | 7 | 143 | 466 | 36 | 355 | 2.60e-65 | 216 |
| Msa0226530 | AT2G15460.1 | 35.393 | 356 | 215 | 9 | 119 | 466 | 22 | 370 | 5.76e-64 | 212 |
| Msa0226530 | AT2G33160.1 | 36.207 | 348 | 210 | 6 | 125 | 466 | 30 | 371 | 2.34e-63 | 217 |
| Msa0226530 | AT4G32380.1 | 36.676 | 349 | 207 | 8 | 124 | 466 | 23 | 363 | 2.46e-63 | 212 |
| Msa0226530 | AT2G15450.1 | 34.831 | 356 | 217 | 9 | 119 | 466 | 22 | 370 | 1.04e-62 | 209 |
| Msa0226530 | AT1G43080.1 | 34.957 | 349 | 213 | 8 | 125 | 466 | 29 | 370 | 1.75e-62 | 208 |
| Msa0226530 | AT2G15470.1 | 34.831 | 356 | 217 | 9 | 119 | 466 | 22 | 370 | 3.83e-61 | 205 |
| Msa0226530 | AT1G43090.1 | 34.670 | 349 | 214 | 8 | 125 | 466 | 29 | 370 | 4.03e-61 | 206 |
| Msa0226530 | AT1G80140.1 | 36.741 | 313 | 184 | 8 | 158 | 466 | 2 | 304 | 6.07e-61 | 202 |
| Msa0226530 | AT4G35670.2 | 40.856 | 257 | 144 | 2 | 210 | 466 | 2 | 250 | 9.17e-61 | 200 |
| Msa0226530 | AT4G13760.1 | 32.759 | 348 | 222 | 6 | 125 | 466 | 29 | 370 | 2.21e-60 | 203 |
| Msa0226530 | AT2G26620.1 | 34.294 | 347 | 216 | 8 | 125 | 466 | 29 | 368 | 6.28e-60 | 202 |
| Msa0226530 | AT1G43100.1 | 34.384 | 349 | 215 | 8 | 125 | 466 | 29 | 370 | 2.75e-59 | 201 |
| Msa0226530 | AT3G14040.1 | 35.860 | 343 | 210 | 6 | 127 | 466 | 71 | 406 | 8.78e-58 | 197 |
| Msa0226530 | AT2G40310.1 | 31.897 | 348 | 225 | 6 | 125 | 466 | 29 | 370 | 3.46e-57 | 194 |
| Msa0226530 | AT5G39910.1 | 37.209 | 301 | 163 | 6 | 126 | 421 | 35 | 314 | 1.62e-56 | 192 |
| Msa0226530 | AT3G07850.1 | 36.333 | 300 | 184 | 5 | 170 | 466 | 110 | 405 | 1.64e-56 | 194 |
| Msa0226530 | AT5G14650.2 | 37.269 | 271 | 164 | 5 | 116 | 385 | 40 | 305 | 4.75e-56 | 189 |
| Msa0226530 | AT4G32375.1 | 37.970 | 266 | 157 | 3 | 202 | 466 | 5 | 263 | 2.90e-55 | 190 |
| Msa0226530 | AT4G32370.1 | 37.134 | 307 | 174 | 8 | 122 | 418 | 29 | 326 | 2.47e-53 | 182 |
| Msa0226530 | AT4G32380.2 | 36.184 | 304 | 180 | 9 | 124 | 423 | 23 | 316 | 1.37e-48 | 172 |
| Msa0226530 | AT1G80180.1 | 48.551 | 138 | 51 | 6 | 1 | 118 | 1 | 138 | 5.58e-27 | 105 |
| Msa0226530 | AT1G15400.3 | 48.387 | 124 | 42 | 5 | 1 | 105 | 1 | 121 | 7.24e-26 | 103 |
| Msa0226530 | AT1G15400.2 | 48.387 | 124 | 42 | 5 | 1 | 105 | 1 | 121 | 9.77e-26 | 102 |
| Msa0226530 | AT1G15400.1 | 48.387 | 124 | 42 | 5 | 1 | 105 | 1 | 121 | 1.64e-25 | 102 |
| Msa0226530 | AT3G62110.1 | 28.836 | 378 | 219 | 12 | 98 | 440 | 15 | 377 | 7.01e-25 | 107 |
| Msa0226530 | AT3G62110.2 | 28.836 | 378 | 219 | 12 | 98 | 440 | 15 | 377 | 7.01e-25 | 107 |
| Msa0226530 | AT5G41870.1 | 29.156 | 391 | 218 | 14 | 112 | 466 | 37 | 404 | 5.90e-22 | 98.6 |
| Msa0226530 | AT4G33440.1 | 28.135 | 327 | 174 | 12 | 123 | 408 | 68 | 374 | 2.08e-20 | 94.0 |
| Msa0226530 | AT4G23820.1 | 26.842 | 380 | 217 | 12 | 127 | 466 | 41 | 399 | 1.45e-19 | 91.3 |
| Msa0226530 | AT3G42950.1 | 26.912 | 353 | 204 | 12 | 126 | 440 | 65 | 401 | 2.14e-18 | 88.2 |
| Msa0226530 | AT1G19170.1 | 25.995 | 377 | 217 | 15 | 103 | 440 | 70 | 423 | 5.09e-18 | 87.0 |
| Msa0226530 | AT3G48950.1 | 24.603 | 378 | 226 | 14 | 129 | 466 | 47 | 405 | 1.28e-16 | 82.4 |
| Msa0226530 | AT5G49215.1 | 26.582 | 395 | 222 | 13 | 116 | 466 | 32 | 402 | 1.93e-16 | 82.0 |
| Msa0226530 | AT5G49215.2 | 26.582 | 395 | 222 | 13 | 116 | 466 | 30 | 400 | 2.08e-16 | 81.6 |
| Msa0226530 | AT5G20100.1 | 47.273 | 110 | 42 | 5 | 3 | 108 | 2 | 99 | 3.67e-16 | 74.7 |
| Msa0226530 | AT4G23500.1 | 27.895 | 190 | 117 | 5 | 225 | 401 | 181 | 363 | 3.58e-14 | 75.1 |
| Msa0226530 | AT2G23900.1 | 23.580 | 352 | 221 | 14 | 129 | 445 | 58 | 396 | 4.42e-14 | 74.7 |
| Msa0226530 | AT3G61490.2 | 25.000 | 312 | 185 | 11 | 128 | 404 | 46 | 343 | 2.35e-13 | 72.4 |
| Msa0226530 | AT3G61490.3 | 25.000 | 312 | 185 | 11 | 128 | 404 | 46 | 343 | 2.35e-13 | 72.4 |
| Msa0226530 | AT3G61490.1 | 25.000 | 312 | 185 | 11 | 128 | 404 | 46 | 343 | 2.35e-13 | 72.4 |
| Msa0226530 | AT3G61490.5 | 28.497 | 193 | 118 | 6 | 225 | 404 | 173 | 358 | 2.64e-13 | 72.4 |
| Msa0226530 | AT3G61490.4 | 30.055 | 183 | 108 | 6 | 225 | 394 | 271 | 446 | 2.73e-13 | 72.4 |
| Msa0226530 | AT3G57790.2 | 24.917 | 301 | 182 | 12 | 127 | 399 | 35 | 319 | 1.74e-12 | 69.7 |
| Msa0226530 | AT3G57790.1 | 24.917 | 301 | 182 | 12 | 127 | 399 | 35 | 319 | 1.74e-12 | 69.7 |
| Msa0226530 | AT3G16850.1 | 25.472 | 318 | 188 | 11 | 127 | 409 | 40 | 343 | 3.61e-11 | 65.5 |
Find 173 sgRNAs with CRISPR-Local
Find 359 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCAATAAATGAGGGTTATT+TGG | 0.101908 | 2_1:-77038248 | Msa0226530:three_prime_UTR |
| CCCAAATAACCCTCATTTAT+TGG | 0.114856 | 2_1:+77038247 | None:intergenic |
| ATTAGGCATTGCTTTGAATT+TGG | 0.159887 | 2_1:-77038362 | Msa0226530:three_prime_UTR |
| AAATGTTGGTGTTGTATTAA+TGG | 0.195964 | 2_1:-77038332 | Msa0226530:three_prime_UTR |
| ATGTGGATTCCATCAGTATT+AGG | 0.197943 | 2_1:+77040624 | None:intergenic |
| GTTCTTTCCATCACTCATTT+TGG | 0.214496 | 2_1:-77041840 | Msa0226530:CDS |
| TATCTTTACAACACTGATAA+TGG | 0.215916 | 2_1:-77039584 | Msa0226530:CDS |
| CATTGTTCTATGATCCTTAT+AGG | 0.237350 | 2_1:-77038082 | Msa0226530:three_prime_UTR |
| GTGCTAGTATTGATATGTTT+GGG | 0.239903 | 2_1:-77038686 | Msa0226530:three_prime_UTR |
| ATCACTGCAGGCAAATTTAA+TGG | 0.242128 | 2_1:+77038975 | None:intergenic |
| ATTAGGCATTGCTTTGAATT+AGG | 0.243157 | 2_1:-77038379 | Msa0226530:three_prime_UTR |
| TTCAGGCCTTCTTGAAGGTT+TGG | 0.258824 | 2_1:-77041410 | Msa0226530:intron |
| ATCAAAATAAGAAATATTTA+TGG | 0.263046 | 2_1:-77038580 | Msa0226530:three_prime_UTR |
| TAGTATTGATCTATTATTAT+TGG | 0.266163 | 2_1:+77039386 | None:intergenic |
| TTTGAAGAGGGTGTTGTATT+AGG | 0.271065 | 2_1:-77038396 | Msa0226530:three_prime_UTR |
| ATCTTTACAACACTGATAAT+GGG | 0.275213 | 2_1:-77039583 | Msa0226530:CDS |
| CACATTCCAGAATATCTTAA+TGG | 0.285684 | 2_1:-77039423 | Msa0226530:CDS |
| TTATAGTCTTGATGAATTAA+TGG | 0.295189 | 2_1:-77038436 | Msa0226530:three_prime_UTR |
| AAGGTTCATCAGGGTTTGTT+TGG | 0.296640 | 2_1:-77043545 | Msa0226530:CDS |
| GAAGGTGGAGGGAGAATAGA+TGG | 0.297947 | 2_1:-77041055 | Msa0226530:CDS |
| CTCCTAGGATTTCTGCTTGT+GGG | 0.299207 | 2_1:-77043314 | Msa0226530:CDS |
| CTCGTTGGCCACGCCCTATA+AGG | 0.305710 | 2_1:+77038068 | None:intergenic |
| AACCCGCCTGGATTTGGATT+TGG | 0.305803 | 2_1:+77041860 | None:intergenic |
| GGAAAGAACCCGCCTGGATT+TGG | 0.307981 | 2_1:+77041854 | None:intergenic |
| TCAGGCCTTCTTGAAGGTTT+GGG | 0.313872 | 2_1:-77041409 | Msa0226530:intron |
| CCAATAAATGAGGGTTATTT+GGG | 0.326963 | 2_1:-77038247 | Msa0226530:three_prime_UTR |
| TCCATGCGAAGGACTATATC+TGG | 0.328133 | 2_1:-77038947 | Msa0226530:CDS |
| ATTCAAAATGTAATTGTTGA+TGG | 0.333748 | 2_1:-77039611 | Msa0226530:CDS |
| GGTGCTAGTATTGATATGTT+TGG | 0.335287 | 2_1:-77038687 | Msa0226530:three_prime_UTR |
| TATATTGCTCAATATGTTCA+TGG | 0.345027 | 2_1:+77038523 | None:intergenic |
| TCAGAAATTCTTCACGGGTC+TGG | 0.349912 | 2_1:-77039797 | Msa0226530:CDS |
| GAAATTGCTTGTTCTCTCTC+TGG | 0.353244 | 2_1:-77041387 | Msa0226530:CDS |
| GGCAAATTTAATGGTTTCTT+CGG | 0.366996 | 2_1:+77038984 | None:intergenic |
| TTCAGAAGACAAGGTTCATC+AGG | 0.369694 | 2_1:-77043555 | Msa0226530:CDS |
| TAATTTAATTTATACAACTT+TGG | 0.384231 | 2_1:-77038868 | Msa0226530:three_prime_UTR |
| GGTGTTGTATTAATGGATTA+TGG | 0.385584 | 2_1:-77038325 | Msa0226530:three_prime_UTR |
| GATATTCTGGAATGTGATCT+TGG | 0.388014 | 2_1:+77039430 | None:intergenic |
| GTTCTTGTTGATTCTGACTC+TGG | 0.396706 | 2_1:+77043484 | None:intergenic |
| ATTTCTCTTCGACCGTCAAT+AGG | 0.397609 | 2_1:+77038199 | None:intergenic |
| TTGATCTATTATTATTGGAT+TGG | 0.401401 | 2_1:+77039391 | None:intergenic |
| AGGTTCATCAGGGTTTGTTT+GGG | 0.404671 | 2_1:-77043544 | Msa0226530:CDS |
| CGAAATATTTCCTGCGGTCC+AGG | 0.405337 | 2_1:-77039771 | Msa0226530:CDS |
| CTGAGATAGCAATACATTAG+TGG | 0.412225 | 2_1:+77040991 | None:intergenic |
| GTGAATCACCTTTCTGTAGA+AGG | 0.414133 | 2_1:-77041073 | Msa0226530:CDS |
| CACGGTCCACCAATGTCAAT+TGG | 0.416662 | 2_1:+77041318 | None:intergenic |
| TTTAAACCATGCCATATGTC+AGG | 0.419031 | 2_1:+77041124 | None:intergenic |
| CTGGACCGCAGGAAATATTT+CGG | 0.419458 | 2_1:+77039772 | None:intergenic |
| TGTGGATTCCATCAGTATTA+GGG | 0.421148 | 2_1:+77040625 | None:intergenic |
| AAAGATAGTGTAATTAGAAC+AGG | 0.430176 | 2_1:-77040576 | Msa0226530:intron |
| ATATCCTTCATTAATATTCA+AGG | 0.433661 | 2_1:-77039018 | Msa0226530:CDS |
| CTTCTCTGAACAGTATTGAT+TGG | 0.435131 | 2_1:+77043402 | None:intergenic |
| ATTGTTCTATGATCCTTATA+GGG | 0.436899 | 2_1:-77038081 | Msa0226530:three_prime_UTR |
| ACGACATCCATGCAATAATC+AGG | 0.440847 | 2_1:-77039354 | Msa0226530:intron |
| CGTTCTAACGGTGGAGGACG+TGG | 0.452280 | 2_1:-77043378 | Msa0226530:CDS |
| GCAAATGGATTTACTTCCAC+GGG | 0.466116 | 2_1:-77041096 | Msa0226530:CDS |
| ATGGTTTAAATAAGCGCAAA+TGG | 0.466463 | 2_1:-77041111 | Msa0226530:CDS |
| GATTCATTTCAAACAACAAA+GGG | 0.469214 | 2_1:-77038811 | Msa0226530:three_prime_UTR |
| GCCCTAGCTAAACCTATTGA+CGG | 0.474495 | 2_1:-77038211 | Msa0226530:three_prime_UTR |
| GGTGTTGATCTTGCAAGATC+TGG | 0.475427 | 2_1:+77041012 | None:intergenic |
| CTTGTCAGTCCAATTGACAT+TGG | 0.476571 | 2_1:-77041327 | Msa0226530:CDS |
| GCGGTCCAGGTCATGGCATA+AGG | 0.477965 | 2_1:-77039758 | Msa0226530:intron |
| CACCACGAGACCCTGACATA+TGG | 0.479091 | 2_1:-77041135 | Msa0226530:CDS |
| GACCGTCAATAGGTTTAGCT+AGG | 0.480231 | 2_1:+77038209 | None:intergenic |
| CTCTACCTGGATCGATGCTT+AGG | 0.481698 | 2_1:+77043249 | None:intergenic |
| AATTCCAGCTTTCAGAATCT+CGG | 0.483522 | 2_1:-77038179 | Msa0226530:three_prime_UTR |
| GCTTAGGAAAATCAAACGTA+TGG | 0.487471 | 2_1:-77039640 | Msa0226530:CDS |
| ACAAGCATTACAAGGAGCTA+TGG | 0.488984 | 2_1:-77038757 | Msa0226530:three_prime_UTR |
| GTCGATCTAAGATCACTTTG+AGG | 0.490157 | 2_1:-77041296 | Msa0226530:CDS |
| TCTACTAGAATATAGAGTAT+AGG | 0.496153 | 2_1:-77038632 | Msa0226530:three_prime_UTR |
| GTCAGTCCAATTGACATTGG+TGG | 0.498328 | 2_1:-77041324 | Msa0226530:CDS |
| TGGAGGGAGAATAGATGGAA+TGG | 0.499731 | 2_1:-77041050 | Msa0226530:CDS |
| TTAATCGAATCTCCCGCTCC+TGG | 0.500024 | 2_1:-77038156 | Msa0226530:three_prime_UTR |
| TTGGGAAAGTAGGAGAGAAG+AGG | 0.503813 | 2_1:-77043278 | Msa0226530:CDS |
| CATTAATATTCAAGGAACTT+CGG | 0.505412 | 2_1:-77039010 | Msa0226530:CDS |
| GGAGGGAGAATAGATGGAAT+GGG | 0.507401 | 2_1:-77041049 | Msa0226530:CDS |
| TGCTCAGATACCAATAAATG+AGG | 0.509278 | 2_1:-77038257 | Msa0226530:three_prime_UTR |
| GCTGATACAAGAGGGAAGTT+CGG | 0.510716 | 2_1:-77038299 | Msa0226530:three_prime_UTR |
| TTAACCGAGATTCTGAAAGC+TGG | 0.511024 | 2_1:+77038175 | None:intergenic |
| CGCATTCACTAGCTGTATGC+GGG | 0.515066 | 2_1:-77040688 | Msa0226530:CDS |
| TTCAATACCTGATTATTGCA+TGG | 0.516335 | 2_1:+77039347 | None:intergenic |
| AGGCTCATACACAAAACGTC+TGG | 0.516633 | 2_1:+77038125 | None:intergenic |
| ATTTCCTGCGGTCCAGGTCA+TGG | 0.517475 | 2_1:-77039765 | Msa0226530:CDS |
| AGTTCCTTGAATATTAATGA+AGG | 0.518756 | 2_1:+77039014 | None:intergenic |
| GAGAATAGATGGAATGGGAC+AGG | 0.519778 | 2_1:-77041044 | Msa0226530:CDS |
| CCATTGTCAGAAATTCTTCA+CGG | 0.520353 | 2_1:-77039803 | Msa0226530:CDS |
| CACCTTTCTGTAGAAGGTGG+AGG | 0.520732 | 2_1:-77041067 | Msa0226530:CDS |
| CATTGTCAGAAATTCTTCAC+GGG | 0.523478 | 2_1:-77039802 | Msa0226530:CDS |
| TCTCCTAGGATTTCTGCTTG+TGG | 0.524460 | 2_1:-77043315 | Msa0226530:CDS |
| CGATTGAGCCACCGTCTCCT+AGG | 0.529012 | 2_1:-77043329 | Msa0226530:CDS |
| AAATTTAATGGTTTCTTCGG+TGG | 0.531158 | 2_1:+77038987 | None:intergenic |
| ATTATGAAAACCATCACCTA+TGG | 0.537109 | 2_1:+77041815 | None:intergenic |
| TCAGTATTAGGGCTGGAAGC+AGG | 0.538760 | 2_1:+77040636 | None:intergenic |
| GCGCCACTAACCGTTGGAGC+AGG | 0.541200 | 2_1:+77040881 | None:intergenic |
| AGTGATGGAAAGAACCCGCC+TGG | 0.541770 | 2_1:+77041848 | None:intergenic |
| TCGATCTAAGATCACTTTGA+GGG | 0.543860 | 2_1:-77041295 | Msa0226530:intron |
| ACAAGTATTGTACTTCAAGT+AGG | 0.545287 | 2_1:-77038477 | Msa0226530:three_prime_UTR |
| AGTCTTGATGAATTAATGGC+AGG | 0.546312 | 2_1:-77038432 | Msa0226530:three_prime_UTR |
| CCAGATCCAAATCCAAATCC+AGG | 0.547681 | 2_1:-77041866 | Msa0226530:intron |
| AACCACCTAAGCATCGATCC+AGG | 0.548665 | 2_1:-77043254 | Msa0226530:intron |
| CGCAAATGGATTTACTTCCA+CGG | 0.548823 | 2_1:-77041097 | Msa0226530:CDS |
| ATCCACATTAGTGCTACAAA+AGG | 0.548972 | 2_1:-77040609 | Msa0226530:CDS |
| GATTCCATCAGTATTAGGGC+TGG | 0.550615 | 2_1:+77040629 | None:intergenic |
| CTTGCATTTATGAAAAGTCA+AGG | 0.554504 | 2_1:+77040761 | None:intergenic |
| CAAGCATTACAAGGAGCTAT+GGG | 0.555323 | 2_1:-77038756 | Msa0226530:three_prime_UTR |
| GGAGACGGTGGCTCAATCGC+CGG | 0.558530 | 2_1:+77043333 | None:intergenic |
| GCTTCCAGCCCTAATACTGA+TGG | 0.563965 | 2_1:-77040633 | Msa0226530:CDS |
| GCCATGTCTTCCTGCTCCAA+CGG | 0.565057 | 2_1:-77040891 | Msa0226530:intron |
| AATTTCCCAAACCTTCAAGA+AGG | 0.566327 | 2_1:+77041404 | None:intergenic |
| GATGCAACATCACCACAGCT+TGG | 0.569916 | 2_1:-77043426 | Msa0226530:CDS |
| GGAGGACGTGGTTACCGTAC+CGG | 0.573123 | 2_1:-77043366 | Msa0226530:CDS |
| AGATTCATTTCAAACAACAA+AGG | 0.573267 | 2_1:-77038812 | Msa0226530:three_prime_UTR |
| TCTATGATCCTTATAGGGCG+TGG | 0.573916 | 2_1:-77038076 | Msa0226530:three_prime_UTR |
| TCCCTCCACCTTCTACAGAA+AGG | 0.574731 | 2_1:+77041065 | None:intergenic |
| TCCAGATATAGTCCTTCGCA+TGG | 0.577421 | 2_1:+77038946 | None:intergenic |
| GAATTAGTCGAATTTGAAGA+GGG | 0.577760 | 2_1:-77038408 | Msa0226530:three_prime_UTR |
| TGAATTAGTCGAATTTGAAG+AGG | 0.578122 | 2_1:-77038409 | Msa0226530:three_prime_UTR |
| TATGCCATGACCTGGACCGC+AGG | 0.579266 | 2_1:+77039761 | None:intergenic |
| CTTAGGAAAATCAAACGTAT+GGG | 0.579944 | 2_1:-77039639 | Msa0226530:CDS |
| CCGTACCGGAAAAGTATCTC+CGG | 0.581778 | 2_1:-77043352 | Msa0226530:CDS |
| ACCGTCAATAGGTTTAGCTA+GGG | 0.581785 | 2_1:+77038210 | None:intergenic |
| GCAACAAGTTCTGTTTGAAG+AGG | 0.583723 | 2_1:+77038105 | None:intergenic |
| GCATGGAGAAGCATCACTGC+AGG | 0.584741 | 2_1:+77038963 | None:intergenic |
| TTAAACCATGCCATATGTCA+GGG | 0.584939 | 2_1:+77041125 | None:intergenic |
| TTTCACCTTATGCCATGACC+TGG | 0.585279 | 2_1:+77039753 | None:intergenic |
| TTATGGTTTGCTGATACAAG+AGG | 0.588636 | 2_1:-77038308 | Msa0226530:three_prime_UTR |
| ACCTTTCTGTAGAAGGTGGA+GGG | 0.590327 | 2_1:-77041066 | Msa0226530:CDS |
| TGCTAGTATTGATATGTTTG+GGG | 0.591783 | 2_1:-77038685 | Msa0226530:three_prime_UTR |
| CTGGAAATAATACCAGGAGC+GGG | 0.593004 | 2_1:+77038144 | None:intergenic |
| AACCCACAAGCAGAAATCCT+AGG | 0.594122 | 2_1:+77043312 | None:intergenic |
| CAGACTTCAGCTGTTCAAGT+GGG | 0.594864 | 2_1:-77039045 | Msa0226530:CDS |
| TATGGCACCAAAATGAGTGA+TGG | 0.595270 | 2_1:+77041833 | None:intergenic |
| ACCGTTGGAGCAGGAAGACA+TGG | 0.595442 | 2_1:+77040890 | None:intergenic |
| AAACGTCTGGAAATAATACC+AGG | 0.595522 | 2_1:+77038138 | None:intergenic |
| CTGTTAATCAAGTGCAACAG+AGG | 0.595795 | 2_1:-77038788 | Msa0226530:three_prime_UTR |
| TACCTGGATCGATGCTTAGG+TGG | 0.595835 | 2_1:+77043252 | None:intergenic |
| TGCCATATGTCAGGGTCTCG+TGG | 0.597428 | 2_1:+77041133 | None:intergenic |
| ATCCAAATCCAAATCCAGGC+GGG | 0.599305 | 2_1:-77041862 | Msa0226530:CDS |
| GGTGAGAATCAAAACATGGC+AGG | 0.600627 | 2_1:-77039561 | Msa0226530:intron |
| GCAGACTTCAGCTGTTCAAG+TGG | 0.600789 | 2_1:-77039046 | Msa0226530:intron |
| TCAGAAGACAAGGTTCATCA+GGG | 0.600967 | 2_1:-77043554 | Msa0226530:CDS |
| AGAAGTCGTTCTAACGGTGG+AGG | 0.607642 | 2_1:-77043384 | Msa0226530:CDS |
| TCTTTACAACACTGATAATG+GGG | 0.611264 | 2_1:-77039582 | Msa0226530:CDS |
| GAGTTACATTTACGTACGAT+CGG | 0.617220 | 2_1:-77038708 | Msa0226530:three_prime_UTR |
| CCGTGAAGAATTTCTGACAA+TGG | 0.622012 | 2_1:+77039803 | None:intergenic |
| AGTGATGCTTCTCCATGCGA+AGG | 0.626792 | 2_1:-77038958 | Msa0226530:CDS |
| CGAGACCCTGACATATGGCA+TGG | 0.627441 | 2_1:-77041130 | Msa0226530:CDS |
| AATCACCTTTCTGTAGAAGG+TGG | 0.627809 | 2_1:-77041070 | Msa0226530:CDS |
| TAGATGGAATGGGACAGGAA+TGG | 0.629282 | 2_1:-77041039 | Msa0226530:CDS |
| ATGGAATGGGACAGGAATGG+TGG | 0.629500 | 2_1:-77041036 | Msa0226530:CDS |
| TCGCATTCACTAGCTGTATG+CGG | 0.629981 | 2_1:-77040689 | Msa0226530:CDS |
| TATGGTTTGCTGATACAAGA+GGG | 0.633646 | 2_1:-77038307 | Msa0226530:three_prime_UTR |
| ACAGAGAAACCAGACATGGA+AGG | 0.634834 | 2_1:-77043600 | None:intergenic |
| TGTTAATCAAGTGCAACAGA+GGG | 0.636230 | 2_1:-77038787 | Msa0226530:three_prime_UTR |
| TCTGGAAATAATACCAGGAG+CGG | 0.637044 | 2_1:+77038143 | None:intergenic |
| GTTCAGAGAAGTCGTTCTAA+CGG | 0.637358 | 2_1:-77043390 | Msa0226530:CDS |
| CAAGCAGAAATCCTAGGAGA+CGG | 0.637647 | 2_1:+77043318 | None:intergenic |
| GCTCAGATACCAATAAATGA+GGG | 0.638738 | 2_1:-77038256 | Msa0226530:three_prime_UTR |
| ATTCTGGAATGTGATCTTGG+AGG | 0.640527 | 2_1:+77039433 | None:intergenic |
| GCAGTATCATTCAGAAGACA+AGG | 0.648817 | 2_1:-77043564 | Msa0226530:CDS |
| TTTGGCTATTTAGCACCACA+AGG | 0.650329 | 2_1:+77040721 | None:intergenic |
| TCTGAAAGTCAGAAACCTTG+TGG | 0.650336 | 2_1:-77040736 | Msa0226530:CDS |
| ATGGGGTGAGAATCAAAACA+TGG | 0.670172 | 2_1:-77039565 | Msa0226530:CDS |
| TGGATCCGAAATATTTCCTG+CGG | 0.672303 | 2_1:-77039777 | Msa0226530:CDS |
| CTATAAGGATCATAGAACAA+TGG | 0.675226 | 2_1:+77038083 | None:intergenic |
| CAGAGAAGTCGTTCTAACGG+TGG | 0.679356 | 2_1:-77043387 | Msa0226530:CDS |
| AGACTTCAGCTGTTCAAGTG+GGG | 0.681157 | 2_1:-77039044 | Msa0226530:CDS |
| CAGAAAGGTGATTCACCCCG+TGG | 0.688997 | 2_1:+77041080 | None:intergenic |
| GCAGAAATCCTAGGAGACGG+TGG | 0.696269 | 2_1:+77043321 | None:intergenic |
| GCTGTGGTGATGTTGCATCA+CGG | 0.699454 | 2_1:+77043430 | None:intergenic |
| GTATTGATTGGTCCAAGCTG+TGG | 0.700900 | 2_1:+77043414 | None:intergenic |
| GATCCAAATCCAAATCCAGG+CGG | 0.712455 | 2_1:-77041863 | Msa0226530:CDS |
| CAAATGGATTTACTTCCACG+GGG | 0.737068 | 2_1:-77041095 | Msa0226530:CDS |
| AAAGTGATCTTAGATCGACA+CGG | 0.771784 | 2_1:+77041300 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTAATCTTTTAAATTTTGT+GGG | + | chr2_1:77039222-77039241 | None:intergenic | 10.0% |
| !! | ATTACATAAATTAAAATGTT+TGG | + | chr2_1:77039483-77039502 | None:intergenic | 10.0% |
| !! | ACAAATTATTCAAAATATAT+AGG | + | chr2_1:77042432-77042451 | None:intergenic | 10.0% |
| !!! | TAATTTAATTTATACAACTT+TGG | - | chr2_1:77042791-77042810 | Msa0226530:intron | 10.0% |
| !! | ATCAAAATAAGAAATATTTA+TGG | - | chr2_1:77043079-77043098 | Msa0226530:intron | 10.0% |
| !! | TATAATTTAATTCCCTATAT+AGG | + | chr2_1:77038751-77038770 | None:intergenic | 15.0% |
| !! | TGTATATTAGTAGAAAAATA+CGG | + | chr2_1:77038841-77038860 | None:intergenic | 15.0% |
| !!! | GATTAATCTTTTAAATTTTG+TGG | + | chr2_1:77039223-77039242 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATCTATCTTTTC+AGG | - | chr2_1:77040232-77040251 | Msa0226530:intron | 15.0% |
| !!! | TTATTTGTTTTATAGATCTT+AGG | - | chr2_1:77040490-77040509 | Msa0226530:intron | 15.0% |
| !!! | CATTATTATTTTTGAATGTA+TGG | - | chr2_1:77041500-77041519 | Msa0226530:intron | 15.0% |
| !!! | AAATGATTTACACATTTTTA+TGG | + | chr2_1:77041683-77041702 | None:intergenic | 15.0% |
| !! | ATTATACAATTTATACTACT+TGG | + | chr2_1:77041961-77041980 | None:intergenic | 15.0% |
| !!! | TAGTATTGATCTATTATTAT+TGG | + | chr2_1:77042276-77042295 | None:intergenic | 15.0% |
| !!! | AATTTTAAGATATTTTTGCA+GGG | - | chr2_1:77042333-77042352 | Msa0226530:intron | 15.0% |
| !!! | TGTATTTATGATTTTTACTT+CGG | + | chr2_1:77043165-77043184 | None:intergenic | 15.0% |
| !!! | AATTAGTTACTTTAGATTTG+TGG | - | chr2_1:77038562-77038581 | Msa0226530:three_prime_UTR | 20.0% |
| !!! | ATTAGTTACTTTAGATTTGT+GGG | - | chr2_1:77038563-77038582 | Msa0226530:three_prime_UTR | 20.0% |
| !! | TATATAGTACTATCCTATAT+AGG | - | chr2_1:77038735-77038754 | Msa0226530:three_prime_UTR | 20.0% |
| !! | ATATAGTACTATCCTATATA+GGG | - | chr2_1:77038736-77038755 | Msa0226530:three_prime_UTR | 20.0% |
| !! | ACAATTTATACAAATGTTCA+TGG | + | chr2_1:77039586-77039605 | None:intergenic | 20.0% |
| !!! | ACAAGAAAAGTTTTTTCATA+TGG | + | chr2_1:77040317-77040336 | None:intergenic | 20.0% |
| !!! | ACCTGTTTTTAGTAAAATAT+AGG | - | chr2_1:77041210-77041229 | Msa0226530:intron | 20.0% |
| !!! | TCCTATATTTTACTAAAAAC+AGG | + | chr2_1:77041214-77041233 | None:intergenic | 20.0% |
| !! | TTTCAATGTTACATTATTGT+TGG | + | chr2_1:77041658-77041677 | None:intergenic | 20.0% |
| !! | ATTCAAAATGTAATTGTTGA+TGG | - | chr2_1:77042048-77042067 | Msa0226530:intron | 20.0% |
| !! | TAATGAGAATGAAAATGATA+CGG | + | chr2_1:77042139-77042158 | None:intergenic | 20.0% |
| !! | TTGATCTATTATTATTGGAT+TGG | + | chr2_1:77042271-77042290 | None:intergenic | 20.0% |
| !!! | GAATTTTAAGATATTTTTGC+AGG | - | chr2_1:77042332-77042351 | Msa0226530:intron | 20.0% |
| !! | ATATCCTTCATTAATATTCA+AGG | - | chr2_1:77042641-77042660 | Msa0226530:intron | 20.0% |
| !!! | TGGAAAATATTTTTCATTGA+CGG | - | chr2_1:77042732-77042751 | Msa0226530:intron | 20.0% |
| !!! | TTATAGTCTTGATGAATTAA+TGG | - | chr2_1:77043223-77043242 | Msa0226530:intron | 20.0% |
| !! | TTAGTTACTTTAGATTTGTG+GGG | - | chr2_1:77038564-77038583 | Msa0226530:three_prime_UTR | 25.0% |
| ! | AAGAAAACATCGATATTGTT+AGG | - | chr2_1:77039288-77039307 | Msa0226530:intron | 25.0% |
| ! | TGAATTTCAACGTAATAAAC+AGG | - | chr2_1:77039332-77039351 | Msa0226530:intron | 25.0% |
| ! | GAATTTCAACGTAATAAACA+GGG | - | chr2_1:77039333-77039352 | Msa0226530:intron | 25.0% |
| ! | AATTTCAACGTAATAAACAG+GGG | - | chr2_1:77039334-77039353 | Msa0226530:intron | 25.0% |
| ! | ATATTCATTCATATTCCACA+AGG | - | chr2_1:77040033-77040052 | Msa0226530:intron | 25.0% |
| !! | ACAGAATTTCGTTTAAAATC+CGG | + | chr2_1:77040416-77040435 | None:intergenic | 25.0% |
| !!! | TGAAACTACTTTTACTATGT+AGG | - | chr2_1:77040875-77040894 | Msa0226530:intron | 25.0% |
| ! | AAAGATAGTGTAATTAGAAC+AGG | - | chr2_1:77041083-77041102 | Msa0226530:CDS | 25.0% |
| ! | TAACAACGAATAAACTTTGT+AGG | - | chr2_1:77041254-77041273 | Msa0226530:intron | 25.0% |
| ! | AATAAACTTTGTAGGCATAA+CGG | - | chr2_1:77041262-77041281 | Msa0226530:intron | 25.0% |
| !!! | TTACCTTGTTTTTTACACAA+GGG | - | chr2_1:77041361-77041380 | Msa0226530:CDS | 25.0% |
| ! | TGGAAATGTTTAATGTTGTA+AGG | - | chr2_1:77041590-77041609 | Msa0226530:intron | 25.0% |
| ! | GGAAATGTTTAATGTTGTAA+GGG | - | chr2_1:77041591-77041610 | Msa0226530:intron | 25.0% |
| !!! | TTATTGTTGGTTTATTGTTC+AGG | + | chr2_1:77041645-77041664 | None:intergenic | 25.0% |
| !!! | AACGAAAGTAGTCATTTTTA+TGG | + | chr2_1:77041739-77041758 | None:intergenic | 25.0% |
| !!! | ATTCTAGAACTTCTACAAAA+CGG | + | chr2_1:77041763-77041782 | None:intergenic | 25.0% |
| !!! | ATGTTCACTTTTAGTTCATT+AGG | - | chr2_1:77041932-77041951 | Msa0226530:intron | 25.0% |
| ! | TGAAAAATAGGTTCAAGTAT+CGG | + | chr2_1:77041990-77042009 | None:intergenic | 25.0% |
| ! | TATCTTTACAACACTGATAA+TGG | - | chr2_1:77042075-77042094 | Msa0226530:intron | 25.0% |
| ! | ATCTTTACAACACTGATAAT+GGG | - | chr2_1:77042076-77042095 | Msa0226530:intron | 25.0% |
| !! | CATTTTCCATTAAGATATTC+TGG | + | chr2_1:77042245-77042264 | None:intergenic | 25.0% |
| !!! | TAGTCAGTTATTTTTTTGAG+AGG | - | chr2_1:77042402-77042421 | Msa0226530:intron | 25.0% |
| !! | TCATTAATTTGAATCCTTGT+TGG | + | chr2_1:77042526-77042545 | None:intergenic | 25.0% |
| ! | AGTTCCTTGAATATTAATGA+AGG | + | chr2_1:77042648-77042667 | None:intergenic | 25.0% |
| ! | CATTAATATTCAAGGAACTT+CGG | - | chr2_1:77042649-77042668 | Msa0226530:intron | 25.0% |
| ! | AGATTCATTTCAAACAACAA+AGG | - | chr2_1:77042847-77042866 | Msa0226530:intron | 25.0% |
| ! | GATTCATTTCAAACAACAAA+GGG | - | chr2_1:77042848-77042867 | Msa0226530:intron | 25.0% |
| ! | TCTACTAGAATATAGAGTAT+AGG | - | chr2_1:77043027-77043046 | Msa0226530:intron | 25.0% |
| ! | TATATTGCTCAATATGTTCA+TGG | + | chr2_1:77043139-77043158 | None:intergenic | 25.0% |
| !! | AATTTGGAATCCAAAAATGT+TGG | - | chr2_1:77043313-77043332 | Msa0226530:CDS | 25.0% |
| !! | TAATACAACACCAACATTTT+TGG | + | chr2_1:77043326-77043345 | None:intergenic | 25.0% |
| !!! | AAATGTTGGTGTTGTATTAA+TGG | - | chr2_1:77043327-77043346 | Msa0226530:CDS | 25.0% |
| ! | ATTGTTCTATGATCCTTATA+GGG | - | chr2_1:77043578-77043597 | Msa0226530:CDS | 25.0% |
| !!! | AACTGTTTTGATGCTTTTGT+CGG | - | chr2_1:77038439-77038458 | Msa0226530:three_prime_UTR | 30.0% |
| CTATATATCCAAGTTGTAGA+CGG | + | chr2_1:77038722-77038741 | None:intergenic | 30.0% | |
| TCAAATGAGTCATCTATTGT+GGG | + | chr2_1:77038787-77038806 | None:intergenic | 30.0% | |
| TTCAAATGAGTCATCTATTG+TGG | + | chr2_1:77038788-77038807 | None:intergenic | 30.0% | |
| TTAAGCTCAAAGTTATGCAT+TGG | - | chr2_1:77038963-77038982 | Msa0226530:CDS | 30.0% | |
| TAAGCTCAAAGTTATGCATT+GGG | - | chr2_1:77038964-77038983 | Msa0226530:CDS | 30.0% | |
| GTAATAGAGATGAAATTGAG+AGG | - | chr2_1:77039032-77039051 | Msa0226530:CDS | 30.0% | |
| GGTAAGTAAATTGTAAGTAC+CGG | - | chr2_1:77039108-77039127 | Msa0226530:intron | 30.0% | |
| TACATGTATCTCTATCTATC+CGG | + | chr2_1:77039130-77039149 | None:intergenic | 30.0% | |
| ATTATGAAAACCATCACCTA+TGG | + | chr2_1:77039847-77039866 | None:intergenic | 30.0% | |
| ! | ATACTGTTTTCCCTTGAATT+TGG | - | chr2_1:77039888-77039907 | Msa0226530:intron | 30.0% |
| ATTTATAGCCACTGAATGTT+AGG | - | chr2_1:77040112-77040131 | Msa0226530:intron | 30.0% | |
| ACCATGATATACTGATAAAC+AGG | - | chr2_1:77040202-77040221 | Msa0226530:intron | 30.0% | |
| ACCTGTTTATCAGTATATCA+TGG | + | chr2_1:77040206-77040225 | None:intergenic | 30.0% | |
| ATGGTTTAAATAAGCGCAAA+TGG | - | chr2_1:77040548-77040567 | Msa0226530:intron | 30.0% | |
| ATCAGATTAGAGAAATGAAC+TGG | + | chr2_1:77040822-77040841 | None:intergenic | 30.0% | |
| CTTGCATTTATGAAAAGTCA+AGG | + | chr2_1:77040901-77040920 | None:intergenic | 30.0% | |
| AATACTAGCGTTACTCATAT+TGG | - | chr2_1:77041128-77041147 | Msa0226530:CDS | 30.0% | |
| CTTGTGTAAAAAACAAGGTA+AGG | + | chr2_1:77041362-77041381 | None:intergenic | 30.0% | |
| !!! | CTTACCTTGTTTTTTACACA+AGG | - | chr2_1:77041360-77041379 | Msa0226530:CDS | 30.0% |
| AATCCCTTGTGTAAAAAACA+AGG | + | chr2_1:77041367-77041386 | None:intergenic | 30.0% | |
| TATAAGATGCCTACAAAGTA+GGG | + | chr2_1:77041458-77041477 | None:intergenic | 30.0% | |
| TTATAAGATGCCTACAAAGT+AGG | + | chr2_1:77041459-77041478 | None:intergenic | 30.0% | |
| GCGACTGAAAATATCATATA+GGG | + | chr2_1:77041555-77041574 | None:intergenic | 30.0% | |
| ATTTCACTGCATTACATTTC+AGG | - | chr2_1:77041819-77041838 | Msa0226530:CDS | 30.0% | |
| !! | TTGAACCTATTTTTCAGCAT+TGG | - | chr2_1:77041994-77042013 | Msa0226530:intron | 30.0% |
| CTTAGGAAAATCAAACGTAT+GGG | - | chr2_1:77042020-77042039 | Msa0226530:intron | 30.0% | |
| ! | TCTTTACAACACTGATAATG+GGG | - | chr2_1:77042077-77042096 | Msa0226530:intron | 30.0% |
| CACATTCCAGAATATCTTAA+TGG | - | chr2_1:77042236-77042255 | Msa0226530:intron | 30.0% | |
| TTCAATACCTGATTATTGCA+TGG | + | chr2_1:77042315-77042334 | None:intergenic | 30.0% | |
| ACTGACATGATTATAATCGA+TGG | + | chr2_1:77042482-77042501 | None:intergenic | 30.0% | |
| AAATTTAATGGTTTCTTCGG+TGG | + | chr2_1:77042675-77042694 | None:intergenic | 30.0% | |
| GGCAAATTTAATGGTTTCTT+CGG | + | chr2_1:77042678-77042697 | None:intergenic | 30.0% | |
| ! | CAATTTTTCTCGTTGTATCT+TGG | + | chr2_1:77042763-77042782 | None:intergenic | 30.0% |
| ! | GTTTTACAACAAGCATTACA+AGG | - | chr2_1:77042894-77042913 | Msa0226530:intron | 30.0% |
| !! | GTGCTAGTATTGATATGTTT+GGG | - | chr2_1:77042973-77042992 | Msa0226530:intron | 30.0% |
| !! | TGCTAGTATTGATATGTTTG+GGG | - | chr2_1:77042974-77042993 | Msa0226530:intron | 30.0% |
| ! | ACAAGTATTGTACTTCAAGT+AGG | - | chr2_1:77043182-77043201 | Msa0226530:intron | 30.0% |
| TGAATTAGTCGAATTTGAAG+AGG | - | chr2_1:77043250-77043269 | Msa0226530:intron | 30.0% | |
| GAATTAGTCGAATTTGAAGA+GGG | - | chr2_1:77043251-77043270 | Msa0226530:intron | 30.0% | |
| ! | ATTAGGCATTGCTTTGAATT+AGG | - | chr2_1:77043280-77043299 | Msa0226530:CDS | 30.0% |
| ! | ATTAGGCATTGCTTTGAATT+TGG | - | chr2_1:77043280-77043299 | Msa0226530:CDS | 30.0% |
| !! | GGTGTTGTATTAATGGATTA+TGG | - | chr2_1:77043334-77043353 | Msa0226530:CDS | 30.0% |
| ACCAATAAATGAGGGTTATT+TGG | - | chr2_1:77043411-77043430 | Msa0226530:CDS | 30.0% | |
| CCAATAAATGAGGGTTATTT+GGG | - | chr2_1:77043412-77043431 | Msa0226530:CDS | 30.0% | |
| CTATAAGGATCATAGAACAA+TGG | + | chr2_1:77043579-77043598 | None:intergenic | 30.0% | |
| CATTGTTCTATGATCCTTAT+AGG | - | chr2_1:77043577-77043596 | Msa0226530:CDS | 30.0% | |
| !! | CTTCTCTGAACAGTATTGAT+TGG | + | chr2_1:77038260-77038279 | None:intergenic | 35.0% |
| AACAGTTCAAAAACTCTACC+TGG | + | chr2_1:77038426-77038445 | None:intergenic | 35.0% | |
| TCAAAGTTATGCATTGGGAT+GGG | - | chr2_1:77038969-77038988 | Msa0226530:CDS | 35.0% | |
| ! | TCAACTGTGTCAAGTATTGT+GGG | - | chr2_1:77039000-77039019 | Msa0226530:CDS | 35.0% |
| GAGGATCTCTACTCATATAT+AGG | - | chr2_1:77039087-77039106 | Msa0226530:intron | 35.0% | |
| !! | CATGCAACAACATTGATTTC+TGG | - | chr2_1:77039176-77039195 | Msa0226530:intron | 35.0% |
| TTAGGCCAAACGTAATAAAC+AGG | - | chr2_1:77039306-77039325 | Msa0226530:intron | 35.0% | |
| TAGGCCAAACGTAATAAACA+GGG | - | chr2_1:77039307-77039326 | Msa0226530:intron | 35.0% | |
| ATAATAGAGTCAAGTCCTTG+TGG | + | chr2_1:77039744-77039763 | None:intergenic | 35.0% | |
| ATTTGGATTTGGATCTGGTT+CGG | + | chr2_1:77039791-77039810 | None:intergenic | 35.0% | |
| ! | GTTCTTTCCATCACTCATTT+TGG | - | chr2_1:77039819-77039838 | Msa0226530:CDS | 35.0% |
| ! | TGGTTTTCATAATGACACTC+AGG | - | chr2_1:77039854-77039873 | Msa0226530:intron | 35.0% |
| TTTCCCTTGAATTTGGACTT+TGG | - | chr2_1:77039895-77039914 | Msa0226530:intron | 35.0% | |
| ACAAATCACCTAACATTCAG+TGG | + | chr2_1:77040123-77040142 | None:intergenic | 35.0% | |
| TGTCTCATTGAGCTAGATAT+AGG | - | chr2_1:77040140-77040159 | Msa0226530:intron | 35.0% | |
| AATTTCCCAAACCTTCAAGA+AGG | + | chr2_1:77040258-77040277 | None:intergenic | 35.0% | |
| AAAGTGATCTTAGATCGACA+CGG | + | chr2_1:77040362-77040381 | None:intergenic | 35.0% | |
| ! | TCGATCTAAGATCACTTTGA+GGG | - | chr2_1:77040364-77040383 | Msa0226530:intron | 35.0% |
| TTAAACCATGCCATATGTCA+GGG | + | chr2_1:77040537-77040556 | None:intergenic | 35.0% | |
| TTTAAACCATGCCATATGTC+AGG | + | chr2_1:77040538-77040557 | None:intergenic | 35.0% | |
| CTGAGATAGCAATACATTAG+TGG | + | chr2_1:77040671-77040690 | None:intergenic | 35.0% | |
| TTAGTGGCGCTTCAAAATAT+GGG | - | chr2_1:77040791-77040810 | Msa0226530:intron | 35.0% | |
| !!! | TGAATGCGATGTGCATTTTT+TGG | + | chr2_1:77040959-77040978 | None:intergenic | 35.0% |
| TGTGGATTCCATCAGTATTA+GGG | + | chr2_1:77041037-77041056 | None:intergenic | 35.0% | |
| ATGTGGATTCCATCAGTATT+AGG | + | chr2_1:77041038-77041057 | None:intergenic | 35.0% | |
| ATCCACATTAGTGCTACAAA+AGG | - | chr2_1:77041050-77041069 | Msa0226530:CDS | 35.0% | |
| GCTAGTATTGCATTAGATTG+AGG | + | chr2_1:77041117-77041136 | None:intergenic | 35.0% | |
| GTTGTTATCACATGACTGAA+AGG | + | chr2_1:77041413-77041432 | None:intergenic | 35.0% | |
| ATAAGATGCCTACAAAGTAG+GGG | + | chr2_1:77041457-77041476 | None:intergenic | 35.0% | |
| CGCGACTGAAAATATCATAT+AGG | + | chr2_1:77041556-77041575 | None:intergenic | 35.0% | |
| TTTAATGTTGTAAGGGAGAG+AGG | - | chr2_1:77041598-77041617 | Msa0226530:intron | 35.0% | |
| TTAATGTTGTAAGGGAGAGA+GGG | - | chr2_1:77041599-77041618 | Msa0226530:intron | 35.0% | |
| !! | TGTTGGTTTATTGTTCAGGT+TGG | + | chr2_1:77041641-77041660 | None:intergenic | 35.0% |
| CCATTGTCAGAAATTCTTCA+CGG | - | chr2_1:77041856-77041875 | Msa0226530:CDS | 35.0% | |
| CATTGTCAGAAATTCTTCAC+GGG | - | chr2_1:77041857-77041876 | Msa0226530:CDS | 35.0% | |
| AGCTACCAATGCTGAAAAAT+AGG | + | chr2_1:77042002-77042021 | None:intergenic | 35.0% | |
| !!! | TTTTTCAGCATTGGTAGCTT+AGG | - | chr2_1:77042003-77042022 | Msa0226530:intron | 35.0% |
| GCTTAGGAAAATCAAACGTA+TGG | - | chr2_1:77042019-77042038 | Msa0226530:intron | 35.0% | |
| TCAATAGACTTGTCATCACT+AGG | + | chr2_1:77042169-77042188 | None:intergenic | 35.0% | |
| ! | AGTCGAGCCAAATTTTCTTT+AGG | - | chr2_1:77042188-77042207 | Msa0226530:intron | 35.0% |
| ! | GTCGAGCCAAATTTTCTTTA+GGG | - | chr2_1:77042189-77042208 | Msa0226530:intron | 35.0% |
| CTACCACCCTAAAGAAAATT+TGG | + | chr2_1:77042198-77042217 | None:intergenic | 35.0% | |
| !!! | AATTTTCTTTAGGGTGGTAG+TGG | - | chr2_1:77042198-77042217 | Msa0226530:intron | 35.0% |
| !! | GATATTCTGGAATGTGATCT+TGG | + | chr2_1:77042232-77042251 | None:intergenic | 35.0% |
| TGCAGGACATTACATTCTTA+CGG | + | chr2_1:77042586-77042605 | None:intergenic | 35.0% | |
| ATCACTGCAGGCAAATTTAA+TGG | + | chr2_1:77042687-77042706 | None:intergenic | 35.0% | |
| TGTTAATCAAGTGCAACAGA+GGG | - | chr2_1:77042872-77042891 | Msa0226530:intron | 35.0% | |
| GAGTTACATTTACGTACGAT+CGG | - | chr2_1:77042951-77042970 | Msa0226530:intron | 35.0% | |
| !! | GGTGCTAGTATTGATATGTT+TGG | - | chr2_1:77042972-77042991 | Msa0226530:intron | 35.0% |
| AGTCTTGATGAATTAATGGC+AGG | - | chr2_1:77043227-77043246 | Msa0226530:intron | 35.0% | |
| !! | TTTGAAGAGGGTGTTGTATT+AGG | - | chr2_1:77043263-77043282 | Msa0226530:CDS | 35.0% |
| !! | TTATGGTTTGCTGATACAAG+AGG | - | chr2_1:77043351-77043370 | Msa0226530:CDS | 35.0% |
| !! | TATGGTTTGCTGATACAAGA+GGG | - | chr2_1:77043352-77043371 | Msa0226530:CDS | 35.0% |
| TGCTCAGATACCAATAAATG+AGG | - | chr2_1:77043402-77043421 | Msa0226530:CDS | 35.0% | |
| GCTCAGATACCAATAAATGA+GGG | - | chr2_1:77043403-77043422 | Msa0226530:CDS | 35.0% | |
| CCCAAATAACCCTCATTTAT+TGG | + | chr2_1:77043415-77043434 | None:intergenic | 35.0% | |
| AATTCCAGCTTTCAGAATCT+CGG | - | chr2_1:77043480-77043499 | Msa0226530:CDS | 35.0% | |
| AAACGTCTGGAAATAATACC+AGG | + | chr2_1:77043524-77043543 | None:intergenic | 35.0% | |
| GCAGTATCATTCAGAAGACA+AGG | - | chr2_1:77038095-77038114 | Msa0226530:three_prime_UTR | 40.0% | |
| TTCAGAAGACAAGGTTCATC+AGG | - | chr2_1:77038104-77038123 | Msa0226530:three_prime_UTR | 40.0% | |
| TCAGAAGACAAGGTTCATCA+GGG | - | chr2_1:77038105-77038124 | Msa0226530:three_prime_UTR | 40.0% | |
| ! | AAGGTTCATCAGGGTTTGTT+TGG | - | chr2_1:77038114-77038133 | Msa0226530:three_prime_UTR | 40.0% |
| ! | AGGTTCATCAGGGTTTGTTT+GGG | - | chr2_1:77038115-77038134 | Msa0226530:three_prime_UTR | 40.0% |
| !! | GTTCTTGTTGATTCTGACTC+TGG | + | chr2_1:77038178-77038197 | None:intergenic | 40.0% |
| GTTCAGAGAAGTCGTTCTAA+CGG | - | chr2_1:77038269-77038288 | Msa0226530:three_prime_UTR | 40.0% | |
| ! | ATTTCTGCTTGTGGGTTTTG+TGG | - | chr2_1:77038353-77038372 | Msa0226530:three_prime_UTR | 40.0% |
| !!! | TGTTTTGATGCTTTTGTCGG+TGG | - | chr2_1:77038442-77038461 | Msa0226530:three_prime_UTR | 40.0% |
| CATAAACCTTTCATCGTCAC+CGG | + | chr2_1:77038511-77038530 | None:intergenic | 40.0% | |
| GGGTATAGTATAGTACCTAG+TGG | - | chr2_1:77038584-77038603 | Msa0226530:three_prime_UTR | 40.0% | |
| TCATGATGAACTCAACCACT+AGG | + | chr2_1:77038602-77038621 | None:intergenic | 40.0% | |
| TGTTTACACCGTCTACAACT+TGG | - | chr2_1:77038711-77038730 | Msa0226530:three_prime_UTR | 40.0% | |
| ATGAGTCATCTATTGTGGGA+CGG | + | chr2_1:77038783-77038802 | None:intergenic | 40.0% | |
| ACTCATCGAGACGAATCTAA+CGG | + | chr2_1:77038889-77038908 | None:intergenic | 40.0% | |
| CTCAAAGTTATGCATTGGGA+TGG | - | chr2_1:77038968-77038987 | Msa0226530:CDS | 40.0% | |
| ! | GTCAACTGTGTCAAGTATTG+TGG | - | chr2_1:77038999-77039018 | Msa0226530:CDS | 40.0% |
| ! | CATAGCGAGTTGAAATAGAG+AGG | - | chr2_1:77039068-77039087 | Msa0226530:intron | 40.0% |
| AGGCCAAACGTAATAAACAG+GGG | - | chr2_1:77039308-77039327 | Msa0226530:intron | 40.0% | |
| CATCCCCTGTTTATTACGTT+TGG | + | chr2_1:77039314-77039333 | None:intergenic | 40.0% | |
| ATTATCAAACTCCCACGTTC+TGG | - | chr2_1:77039759-77039778 | Msa0226530:CDS | 40.0% | |
| TTATCAAACTCCCACGTTCT+GGG | - | chr2_1:77039760-77039779 | Msa0226530:CDS | 40.0% | |
| ! | TTTGGATTTGGATCTGGTTC+GGG | + | chr2_1:77039790-77039809 | None:intergenic | 40.0% |
| TATGGCACCAAAATGAGTGA+TGG | + | chr2_1:77039829-77039848 | None:intergenic | 40.0% | |
| !!! | ATCACTCATTTTGGTGCCAT+AGG | - | chr2_1:77039828-77039847 | Msa0226530:intron | 40.0% |
| CCTCCAAAGTCCAAATTCAA+GGG | + | chr2_1:77039901-77039920 | None:intergenic | 40.0% | |
| AACTTGCAAGAACATCCTTG+TGG | + | chr2_1:77040051-77040070 | None:intergenic | 40.0% | |
| ACAAGGATGTTCTTGCAAGT+TGG | - | chr2_1:77040050-77040069 | Msa0226530:intron | 40.0% | |
| CAAGGATGTTCTTGCAAGTT+GGG | - | chr2_1:77040051-77040070 | Msa0226530:intron | 40.0% | |
| !! | ATCTTTTCAGGCCTTCTTGA+AGG | - | chr2_1:77040244-77040263 | Msa0226530:intron | 40.0% |
| GAAATTGCTTGTTCTCTCTC+TGG | - | chr2_1:77040272-77040291 | Msa0226530:intron | 40.0% | |
| CTTGTCAGTCCAATTGACAT+TGG | - | chr2_1:77040332-77040351 | Msa0226530:intron | 40.0% | |
| ! | GTCGATCTAAGATCACTTTG+AGG | - | chr2_1:77040363-77040382 | Msa0226530:intron | 40.0% |
| ! | CAAGAGTGTGTGAAATCTAC+CGG | - | chr2_1:77040394-77040413 | Msa0226530:intron | 40.0% |
| ! | CGCAAATGGATTTACTTCCA+CGG | - | chr2_1:77040562-77040581 | Msa0226530:intron | 40.0% |
| ! | GCAAATGGATTTACTTCCAC+GGG | - | chr2_1:77040563-77040582 | Msa0226530:intron | 40.0% |
| ! | CAAATGGATTTACTTCCACG+GGG | - | chr2_1:77040564-77040583 | Msa0226530:intron | 40.0% |
| GTGAATCACCTTTCTGTAGA+AGG | - | chr2_1:77040586-77040605 | Msa0226530:CDS | 40.0% | |
| AATCACCTTTCTGTAGAAGG+TGG | - | chr2_1:77040589-77040608 | Msa0226530:CDS | 40.0% | |
| GTTAGTGGCGCTTCAAAATA+TGG | - | chr2_1:77040790-77040809 | Msa0226530:intron | 40.0% | |
| TAGTGGCGCTTCAAAATATG+GGG | - | chr2_1:77040792-77040811 | Msa0226530:intron | 40.0% | |
| TCTGAAAGTCAGAAACCTTG+TGG | - | chr2_1:77040923-77040942 | Msa0226530:intron | 40.0% | |
| TTTGGCTATTTAGCACCACA+AGG | + | chr2_1:77040941-77040960 | None:intergenic | 40.0% | |
| ! | CACCTTTTGTAGCACTAATG+TGG | + | chr2_1:77041055-77041074 | None:intergenic | 40.0% |
| CATACAATACACCAAATGGC+GGG | + | chr2_1:77041336-77041355 | None:intergenic | 40.0% | |
| GCATACAATACACCAAATGG+CGG | + | chr2_1:77041337-77041356 | None:intergenic | 40.0% | |
| GCTGCATACAATACACCAAA+TGG | + | chr2_1:77041340-77041359 | None:intergenic | 40.0% | |
| TAAGATGCCTACAAAGTAGG+GGG | + | chr2_1:77041456-77041475 | None:intergenic | 40.0% | |
| ! | GTCGCGTAGCTTTTAAACTT+TGG | - | chr2_1:77041570-77041589 | Msa0226530:intron | 40.0% |
| CCGTGAAGAATTTCTGACAA+TGG | + | chr2_1:77041859-77041878 | None:intergenic | 40.0% | |
| TGGATCCGAAATATTTCCTG+CGG | - | chr2_1:77041882-77041901 | Msa0226530:intron | 40.0% | |
| ATGGGGTGAGAATCAAAACA+TGG | - | chr2_1:77042094-77042113 | Msa0226530:intron | 40.0% | |
| !! | GAGCCAAATTTTCTTTAGGG+TGG | - | chr2_1:77042192-77042211 | Msa0226530:intron | 40.0% |
| !! | ATTCTGGAATGTGATCTTGG+AGG | + | chr2_1:77042229-77042248 | None:intergenic | 40.0% |
| ACGACATCCATGCAATAATC+AGG | - | chr2_1:77042305-77042324 | Msa0226530:intron | 40.0% | |
| ATTCCTGTCAATCTCCAACA+AGG | - | chr2_1:77042509-77042528 | Msa0226530:intron | 40.0% | |
| AATCCTTGTTGGAGATTGAC+AGG | + | chr2_1:77042515-77042534 | None:intergenic | 40.0% | |
| CTGTTAATCAAGTGCAACAG+AGG | - | chr2_1:77042871-77042890 | Msa0226530:intron | 40.0% | |
| ACAAGCATTACAAGGAGCTA+TGG | - | chr2_1:77042902-77042921 | Msa0226530:intron | 40.0% | |
| CAAGCATTACAAGGAGCTAT+GGG | - | chr2_1:77042903-77042922 | Msa0226530:intron | 40.0% | |
| ACCGTCAATAGGTTTAGCTA+GGG | + | chr2_1:77043452-77043471 | None:intergenic | 40.0% | |
| ATTTCTCTTCGACCGTCAAT+AGG | + | chr2_1:77043463-77043482 | None:intergenic | 40.0% | |
| ! | TTAACCGAGATTCTGAAAGC+TGG | + | chr2_1:77043487-77043506 | None:intergenic | 40.0% |
| TCTGGAAATAATACCAGGAG+CGG | + | chr2_1:77043519-77043538 | None:intergenic | 40.0% | |
| GCAACAAGTTCTGTTTGAAG+AGG | + | chr2_1:77043557-77043576 | None:intergenic | 40.0% | |
| !! | GTATTGATTGGTCCAAGCTG+TGG | + | chr2_1:77038248-77038267 | None:intergenic | 45.0% |
| ! | AATCGCCGGAGATACTTTTC+CGG | + | chr2_1:77038315-77038334 | None:intergenic | 45.0% |
| CAAGCAGAAATCCTAGGAGA+CGG | + | chr2_1:77038344-77038363 | None:intergenic | 45.0% | |
| TCTCCTAGGATTTCTGCTTG+TGG | - | chr2_1:77038344-77038363 | Msa0226530:three_prime_UTR | 45.0% | |
| CTCCTAGGATTTCTGCTTGT+GGG | - | chr2_1:77038345-77038364 | Msa0226530:three_prime_UTR | 45.0% | |
| AACCCACAAGCAGAAATCCT+AGG | + | chr2_1:77038350-77038369 | None:intergenic | 45.0% | |
| !! | TGTGGGTTTTGTGGTGCTTT+TGG | - | chr2_1:77038362-77038381 | Msa0226530:three_prime_UTR | 45.0% |
| !! | GTGGGTTTTGTGGTGCTTTT+GGG | - | chr2_1:77038363-77038382 | Msa0226530:three_prime_UTR | 45.0% |
| !! | TGTGGTGCTTTTGGGAAAGT+AGG | - | chr2_1:77038371-77038390 | Msa0226530:three_prime_UTR | 45.0% |
| TTGGGAAAGTAGGAGAGAAG+AGG | - | chr2_1:77038381-77038400 | Msa0226530:three_prime_UTR | 45.0% | |
| GATATTCCGGTGACGATGAA+AGG | - | chr2_1:77038502-77038521 | Msa0226530:three_prime_UTR | 45.0% | |
| ATGCATTGGGATGGGTAAGA+AGG | - | chr2_1:77038977-77038996 | Msa0226530:CDS | 45.0% | |
| ! | CTGTGTCAAGTATTGTGGGA+CGG | - | chr2_1:77039004-77039023 | Msa0226530:CDS | 45.0% |
| ! | TCTGGAGTCTCTCGTTTATC+TGG | - | chr2_1:77039194-77039213 | Msa0226530:intron | 45.0% |
| CTGGAGTCTCTCGTTTATCT+GGG | - | chr2_1:77039195-77039214 | Msa0226530:intron | 45.0% | |
| TTAATCTATGCAGCTGCACG+CGG | - | chr2_1:77039237-77039256 | Msa0226530:intron | 45.0% | |
| CCTGGATTTGGATTTGGATC+TGG | + | chr2_1:77039796-77039815 | None:intergenic | 45.0% | |
| CCAGATCCAAATCCAAATCC+AGG | - | chr2_1:77039793-77039812 | Msa0226530:CDS | 45.0% | |
| GATCCAAATCCAAATCCAGG+CGG | - | chr2_1:77039796-77039815 | Msa0226530:CDS | 45.0% | |
| ATCCAAATCCAAATCCAGGC+GGG | - | chr2_1:77039797-77039816 | Msa0226530:CDS | 45.0% | |
| !!! | CATTTTGGTGCCATAGGTGA+TGG | - | chr2_1:77039834-77039853 | Msa0226530:intron | 45.0% |
| CCCTTGAATTTGGACTTTGG+AGG | - | chr2_1:77039898-77039917 | Msa0226530:intron | 45.0% | |
| GCCTCCAAAGTCCAAATTCA+AGG | + | chr2_1:77039902-77039921 | None:intergenic | 45.0% | |
| ! | ATTTGGACTTTGGAGGCTTG+AGG | - | chr2_1:77039905-77039924 | Msa0226530:intron | 45.0% |
| TTCAGGCCTTCTTGAAGGTT+TGG | - | chr2_1:77040249-77040268 | Msa0226530:intron | 45.0% | |
| TCAGGCCTTCTTGAAGGTTT+GGG | - | chr2_1:77040250-77040269 | Msa0226530:intron | 45.0% | |
| GTCAGTCCAATTGACATTGG+TGG | - | chr2_1:77040335-77040354 | Msa0226530:intron | 45.0% | |
| CGGTAGATTTCACACACTCT+TGG | + | chr2_1:77040396-77040415 | None:intergenic | 45.0% | |
| ACCTTTCTGTAGAAGGTGGA+GGG | - | chr2_1:77040593-77040612 | Msa0226530:CDS | 45.0% | |
| TGGAGGGAGAATAGATGGAA+TGG | - | chr2_1:77040609-77040628 | Msa0226530:CDS | 45.0% | |
| GGAGGGAGAATAGATGGAAT+GGG | - | chr2_1:77040610-77040629 | Msa0226530:CDS | 45.0% | |
| GAGAATAGATGGAATGGGAC+AGG | - | chr2_1:77040615-77040634 | Msa0226530:CDS | 45.0% | |
| TAGATGGAATGGGACAGGAA+TGG | - | chr2_1:77040620-77040639 | Msa0226530:CDS | 45.0% | |
| !! | GGTGTTGATCTTGCAAGATC+TGG | + | chr2_1:77040650-77040669 | None:intergenic | 45.0% |
| TCGCATTCACTAGCTGTATG+CGG | - | chr2_1:77040970-77040989 | Msa0226530:intron | 45.0% | |
| GATTCCATCAGTATTAGGGC+TGG | + | chr2_1:77041033-77041052 | None:intergenic | 45.0% | |
| ! | TACGGGAGCTTTAGTGCATT+AGG | + | chr2_1:77041291-77041310 | None:intergenic | 45.0% |
| TTCCCAGACATTGCGTATAC+GGG | + | chr2_1:77041308-77041327 | None:intergenic | 45.0% | |
| CTTCCCAGACATTGCGTATA+CGG | + | chr2_1:77041309-77041328 | None:intergenic | 45.0% | |
| GTATACGCAATGTCTGGGAA+GGG | - | chr2_1:77041308-77041327 | Msa0226530:CDS | 45.0% | |
| TATACGCAATGTCTGGGAAG+GGG | - | chr2_1:77041309-77041328 | Msa0226530:CDS | 45.0% | |
| ACAACTTTATCGTTGCGCCA+AGG | - | chr2_1:77041428-77041447 | Msa0226530:intron | 45.0% | |
| TGTAAGGGAGAGAGGGAAAA+AGG | - | chr2_1:77041606-77041625 | Msa0226530:intron | 45.0% | |
| TCAGAAATTCTTCACGGGTC+TGG | - | chr2_1:77041862-77041881 | Msa0226530:CDS | 45.0% | |
| CTGGACCGCAGGAAATATTT+CGG | + | chr2_1:77041890-77041909 | None:intergenic | 45.0% | |
| TTTCACCTTATGCCATGACC+TGG | + | chr2_1:77041909-77041928 | None:intergenic | 45.0% | |
| GGTGAGAATCAAAACATGGC+AGG | - | chr2_1:77042098-77042117 | Msa0226530:intron | 45.0% | |
| TGAAGTCTGCATCACAATGC+AGG | + | chr2_1:77042603-77042622 | None:intergenic | 45.0% | |
| CAGACTTCAGCTGTTCAAGT+GGG | - | chr2_1:77042614-77042633 | Msa0226530:intron | 45.0% | |
| AGACTTCAGCTGTTCAAGTG+GGG | - | chr2_1:77042615-77042634 | Msa0226530:intron | 45.0% | |
| TCCATGCGAAGGACTATATC+TGG | - | chr2_1:77042712-77042731 | Msa0226530:intron | 45.0% | |
| TCCAGATATAGTCCTTCGCA+TGG | + | chr2_1:77042716-77042735 | None:intergenic | 45.0% | |
| GCTGATACAAGAGGGAAGTT+CGG | - | chr2_1:77043360-77043379 | Msa0226530:CDS | 45.0% | |
| GCCCTAGCTAAACCTATTGA+CGG | - | chr2_1:77043448-77043467 | Msa0226530:CDS | 45.0% | |
| GACCGTCAATAGGTTTAGCT+AGG | + | chr2_1:77043453-77043472 | None:intergenic | 45.0% | |
| CTGGAAATAATACCAGGAGC+GGG | + | chr2_1:77043518-77043537 | None:intergenic | 45.0% | |
| AGGCTCATACACAAAACGTC+TGG | + | chr2_1:77043537-77043556 | None:intergenic | 45.0% | |
| TCTATGATCCTTATAGGGCG+TGG | - | chr2_1:77043583-77043602 | Msa0226530:CDS | 45.0% | |
| ! | GCTGTGGTGATGTTGCATCA+CGG | + | chr2_1:77038232-77038251 | None:intergenic | 50.0% |
| GATGCAACATCACCACAGCT+TGG | - | chr2_1:77038233-77038252 | Msa0226530:three_prime_UTR | 50.0% | |
| CAGAGAAGTCGTTCTAACGG+TGG | - | chr2_1:77038272-77038291 | Msa0226530:three_prime_UTR | 50.0% | |
| AGAAGTCGTTCTAACGGTGG+AGG | - | chr2_1:77038275-77038294 | Msa0226530:three_prime_UTR | 50.0% | |
| ! | CCGGAGATACTTTTCCGGTA+CGG | + | chr2_1:77038310-77038329 | None:intergenic | 50.0% |
| !! | CCGTACCGGAAAAGTATCTC+CGG | - | chr2_1:77038307-77038326 | Msa0226530:three_prime_UTR | 50.0% |
| !! | AACCACCTAAGCATCGATCC+AGG | - | chr2_1:77038405-77038424 | Msa0226530:three_prime_UTR | 50.0% |
| TACCTGGATCGATGCTTAGG+TGG | + | chr2_1:77038410-77038429 | None:intergenic | 50.0% | |
| CTCTACCTGGATCGATGCTT+AGG | + | chr2_1:77038413-77038432 | None:intergenic | 50.0% | |
| GGTGGTTTGAATTGAAGCCG+TGG | - | chr2_1:77038460-77038479 | Msa0226530:three_prime_UTR | 50.0% | |
| ATCTCCGGTGACTTCAACCA+CGG | + | chr2_1:77038480-77038499 | None:intergenic | 50.0% | |
| TGGTTGAAGTCACCGGAGAT+GGG | - | chr2_1:77038480-77038499 | Msa0226530:three_prime_UTR | 50.0% | |
| TCACCGGAGATGGGATATTC+CGG | - | chr2_1:77038489-77038508 | Msa0226530:three_prime_UTR | 50.0% | |
| TCACCGGAATATCCCATCTC+CGG | + | chr2_1:77038495-77038514 | None:intergenic | 50.0% | |
| GTCATCTATTGTGGGACGGA+GGG | + | chr2_1:77038779-77038798 | None:intergenic | 50.0% | |
| AGTCATCTATTGTGGGACGG+AGG | + | chr2_1:77038780-77038799 | None:intergenic | 50.0% | |
| ! | TGTCAAGTATTGTGGGACGG+AGG | - | chr2_1:77039007-77039026 | Msa0226530:CDS | 50.0% |
| ! | GTCAAGTATTGTGGGACGGA+GGG | - | chr2_1:77039008-77039027 | Msa0226530:CDS | 50.0% |
| CAAGCACAAGCACAACCACA+AGG | - | chr2_1:77039726-77039745 | Msa0226530:intron | 50.0% | |
| AACCCGCCTGGATTTGGATT+TGG | + | chr2_1:77039802-77039821 | None:intergenic | 50.0% | |
| CACGGTCCACCAATGTCAAT+TGG | + | chr2_1:77040344-77040363 | None:intergenic | 50.0% | |
| CACCTTTCTGTAGAAGGTGG+AGG | - | chr2_1:77040592-77040611 | Msa0226530:CDS | 50.0% | |
| TCCCTCCACCTTCTACAGAA+AGG | + | chr2_1:77040597-77040616 | None:intergenic | 50.0% | |
| GAAGGTGGAGGGAGAATAGA+TGG | - | chr2_1:77040604-77040623 | Msa0226530:CDS | 50.0% | |
| ATGGAATGGGACAGGAATGG+TGG | - | chr2_1:77040623-77040642 | Msa0226530:CDS | 50.0% | |
| CAGGAAGACATGGCTGCAAA+AGG | + | chr2_1:77040762-77040781 | None:intergenic | 50.0% | |
| ! | TTTGAAGCGCCACTAACCGT+TGG | + | chr2_1:77040787-77040806 | None:intergenic | 50.0% |
| CGCATTCACTAGCTGTATGC+GGG | - | chr2_1:77040971-77040990 | Msa0226530:intron | 50.0% | |
| TCAGTATTAGGGCTGGAAGC+AGG | + | chr2_1:77041026-77041045 | None:intergenic | 50.0% | |
| GCTTCCAGCCCTAATACTGA+TGG | - | chr2_1:77041026-77041045 | Msa0226530:CDS | 50.0% | |
| CTCCCGTATACGCAATGTCT+GGG | - | chr2_1:77041303-77041322 | Msa0226530:CDS | 50.0% | |
| CGTATACGCAATGTCTGGGA+AGG | - | chr2_1:77041307-77041326 | Msa0226530:CDS | 50.0% | |
| AAGGTCACGCGTTCAAGTCT+TGG | + | chr2_1:77041394-77041413 | None:intergenic | 50.0% | |
| CGAAATATTTCCTGCGGTCC+AGG | - | chr2_1:77041888-77041907 | Msa0226530:intron | 50.0% | |
| GCAGACTTCAGCTGTTCAAG+TGG | - | chr2_1:77042613-77042632 | Msa0226530:intron | 50.0% | |
| AGTGATGCTTCTCCATGCGA+AGG | - | chr2_1:77042701-77042720 | Msa0226530:intron | 50.0% | |
| TTAATCGAATCTCCCGCTCC+TGG | - | chr2_1:77043503-77043522 | Msa0226530:CDS | 50.0% | |
| GCAGAAATCCTAGGAGACGG+TGG | + | chr2_1:77038341-77038360 | None:intergenic | 55.0% | |
| GAAGCCGTGGTTGAAGTCAC+CGG | - | chr2_1:77038473-77038492 | Msa0226530:three_prime_UTR | 55.0% | |
| GTGGTTGAAGTCACCGGAGA+TGG | - | chr2_1:77038479-77038498 | Msa0226530:three_prime_UTR | 55.0% | |
| !! | TTCGGGTTGACCCAGAACGT+GGG | + | chr2_1:77039773-77039792 | None:intergenic | 55.0% |
| GGAAAGAACCCGCCTGGATT+TGG | + | chr2_1:77039808-77039827 | None:intergenic | 55.0% | |
| ! | AGTGATGGAAAGAACCCGCC+TGG | + | chr2_1:77039814-77039833 | None:intergenic | 55.0% |
| CACCACGAGACCCTGACATA+TGG | - | chr2_1:77040524-77040543 | Msa0226530:intron | 55.0% | |
| TGCCATATGTCAGGGTCTCG+TGG | + | chr2_1:77040529-77040548 | None:intergenic | 55.0% | |
| CGAGACCCTGACATATGGCA+TGG | - | chr2_1:77040529-77040548 | Msa0226530:intron | 55.0% | |
| CAGAAAGGTGATTCACCCCG+TGG | + | chr2_1:77040582-77040601 | None:intergenic | 55.0% | |
| GCCATGTCTTCCTGCTCCAA+CGG | - | chr2_1:77040768-77040787 | Msa0226530:intron | 55.0% | |
| ACCGTTGGAGCAGGAAGACA+TGG | + | chr2_1:77040772-77040791 | None:intergenic | 55.0% | |
| CTTCCTGCTCCAACGGTTAG+TGG | - | chr2_1:77040775-77040794 | Msa0226530:intron | 55.0% | |
| GCTCCCGTATACGCAATGTC+TGG | - | chr2_1:77041302-77041321 | Msa0226530:CDS | 55.0% | |
| CTACAAAGTAGGGGGAGCCT+TGG | + | chr2_1:77041448-77041467 | None:intergenic | 55.0% | |
| CAAGGCTCCCCCTACTTTGT+AGG | - | chr2_1:77041446-77041465 | Msa0226530:intron | 55.0% | |
| ATTTCCTGCGGTCCAGGTCA+TGG | - | chr2_1:77041894-77041913 | Msa0226530:intron | 55.0% | |
| !! | GCATGGAGAAGCATCACTGC+AGG | + | chr2_1:77042699-77042718 | None:intergenic | 55.0% |
| CGTTCTAACGGTGGAGGACG+TGG | - | chr2_1:77038281-77038300 | Msa0226530:three_prime_UTR | 60.0% | |
| GGAGGACGTGGTTACCGTAC+CGG | - | chr2_1:77038293-77038312 | Msa0226530:three_prime_UTR | 60.0% | |
| CGATTGAGCCACCGTCTCCT+AGG | - | chr2_1:77038330-77038349 | Msa0226530:three_prime_UTR | 60.0% | |
| ATCTATGCAGCTGCACGCGG+AGG | - | chr2_1:77039240-77039259 | Msa0226530:intron | 60.0% | |
| !! | GTTCGGGTTGACCCAGAACG+TGG | + | chr2_1:77039774-77039793 | None:intergenic | 60.0% |
| TATGCCATGACCTGGACCGC+AGG | + | chr2_1:77041901-77041920 | None:intergenic | 60.0% | |
| GCGGTCCAGGTCATGGCATA+AGG | - | chr2_1:77041901-77041920 | Msa0226530:intron | 60.0% | |
| GGAGACGGTGGCTCAATCGC+CGG | + | chr2_1:77038329-77038348 | None:intergenic | 65.0% | |
| GCGCCACTAACCGTTGGAGC+AGG | + | chr2_1:77040781-77040800 | None:intergenic | 65.0% | |
| TGGGAAGGGGTCCCGCCATT+TGG | - | chr2_1:77041322-77041341 | Msa0226530:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 77038074 | 77043607 | 77038074 | ID=Msa0226530;Name=Msa0226530 |
| chr2_1 | mRNA | 77038074 | 77043607 | 77038074 | ID=Msa0226530-mRNA-1;Parent=Msa0226530;Name=Msa0226530-mRNA-1;_AED=0.33;_eAED=0.33;_QI=0|0.88|0.8|1|1|1|10|856|468 |
| chr2_1 | exon | 77038074 | 77039064 | 77038074 | ID=Msa0226530-mRNA-1:exon:23366;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77039355 | 77039471 | 77039355 | ID=Msa0226530-mRNA-1:exon:23365;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77039562 | 77039670 | 77039562 | ID=Msa0226530-mRNA-1:exon:23364;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77039759 | 77039840 | 77039759 | ID=Msa0226530-mRNA-1:exon:23363;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77040577 | 77040784 | 77040577 | ID=Msa0226530-mRNA-1:exon:23362;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77040892 | 77040912 | 77040892 | ID=Msa0226530-mRNA-1:exon:23361;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77041006 | 77041176 | 77041006 | ID=Msa0226530-mRNA-1:exon:23360;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77041296 | 77041427 | 77041296 | ID=Msa0226530-mRNA-1:exon:23359;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77041806 | 77041884 | 77041806 | ID=Msa0226530-mRNA-1:exon:23358;Parent=Msa0226530-mRNA-1 |
| chr2_1 | exon | 77043255 | 77043607 | 77043255 | ID=Msa0226530-mRNA-1:exon:23357;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77043255 | 77043607 | 77043255 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77041806 | 77041884 | 77041806 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77041296 | 77041427 | 77041296 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77041006 | 77041176 | 77041006 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77040892 | 77040912 | 77040892 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77040577 | 77040784 | 77040577 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77039759 | 77039840 | 77039759 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77039562 | 77039670 | 77039562 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77039355 | 77039471 | 77039355 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | CDS | 77038930 | 77039064 | 77038930 | ID=Msa0226530-mRNA-1:cds;Parent=Msa0226530-mRNA-1 |
| chr2_1 | three_prime_UTR | 77038074 | 77038929 | 77038074 | ID=Msa0226530-mRNA-1:three_prime_utr;Parent=Msa0226530-mRNA-1 |
| Gene Sequence |
| Protein sequence |
