Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747270 | XP_003591150.1 | 94.030 | 134 | 3 | 1 | 2 | 130 | 34 | 167 | 4.58e-82 | 250 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747270 | sp|Q5J907|TCTP_ELAGV | 85.821 | 134 | 14 | 1 | 2 | 130 | 34 | 167 | 1.42e-76 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747270 | G7I8Q1 | 94.030 | 134 | 3 | 1 | 2 | 130 | 34 | 167 | 2.19e-82 | 250 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002240 | Msa0747270 | 0.811105 | 8.267707e-51 | -8.615850e-47 |
| Msa0011170 | Msa0747270 | 0.801530 | 8.621452e-49 | -8.615850e-47 |
| Msa0011660 | Msa0747270 | -0.819306 | 1.244477e-52 | -8.615850e-47 |
| Msa0014710 | Msa0747270 | 0.807859 | 4.114830e-50 | -8.615850e-47 |
| Msa0018940 | Msa0747270 | 0.801993 | 6.925950e-49 | -8.615850e-47 |
| Msa0020410 | Msa0747270 | 0.822576 | 2.199691e-53 | -8.615850e-47 |
| Msa0021210 | Msa0747270 | 0.811698 | 6.145474e-51 | -8.615850e-47 |
| Msa0032860 | Msa0747270 | 0.839809 | 1.268979e-57 | -8.615850e-47 |
| Msa0032880 | Msa0747270 | 0.895830 | 6.600435e-76 | -8.615850e-47 |
| Msa0037880 | Msa0747270 | 0.832976 | 6.952113e-56 | -8.615850e-47 |
| Msa0044330 | Msa0747270 | 0.805936 | 1.049339e-49 | -8.615850e-47 |
| Msa0050200 | Msa0747270 | 0.810090 | 1.369938e-50 | -8.615850e-47 |
| Msa0065950 | Msa0747270 | 0.807202 | 5.671800e-50 | -8.615850e-47 |
| Msa0089820 | Msa0747270 | 0.835511 | 1.608533e-56 | -8.615850e-47 |
| Msa0090570 | Msa0747270 | 0.804431 | 2.167348e-49 | -8.615850e-47 |
| Msa0109590 | Msa0747270 | 0.805696 | 1.178627e-49 | -8.615850e-47 |
| Msa0112690 | Msa0747270 | 0.804848 | 1.774168e-49 | -8.615850e-47 |
| Msa0114430 | Msa0747270 | 0.816668 | 4.910487e-52 | -8.615850e-47 |
| Msa0610430 | Msa0747270 | 0.800714 | 1.266234e-48 | -8.615850e-47 |
| Msa0613460 | Msa0747270 | 0.803823 | 2.899929e-49 | -8.615850e-47 |
| Msa0617640 | Msa0747270 | 0.800002 | 1.767455e-48 | -8.615850e-47 |
| Msa0620960 | Msa0747270 | 0.825339 | 4.946499e-54 | -8.615850e-47 |
| Msa0653490 | Msa0747270 | 0.802229 | 6.195960e-49 | -8.615850e-47 |
| Msa0665020 | Msa0747270 | 0.821308 | 4.327444e-53 | -8.615850e-47 |
| Msa0672690 | Msa0747270 | 0.806431 | 8.253594e-50 | -8.615850e-47 |
| Msa0679290 | Msa0747270 | -0.805787 | 1.127976e-49 | -8.615850e-47 |
| Msa0701010 | Msa0747270 | 0.834985 | 2.183028e-56 | -8.615850e-47 |
| Msa0703780 | Msa0747270 | 0.804634 | 1.966466e-49 | -8.615850e-47 |
| Msa0711100 | Msa0747270 | 0.807215 | 5.636631e-50 | -8.615850e-47 |
| Msa0711150 | Msa0747270 | 0.817274 | 3.589711e-52 | -8.615850e-47 |
| Msa0716840 | Msa0747270 | 0.800199 | 1.611906e-48 | -8.615850e-47 |
| Msa0723110 | Msa0747270 | 0.803192 | 3.920249e-49 | -8.615850e-47 |
| Msa0735660 | Msa0747270 | 0.842084 | 3.208282e-58 | -8.615850e-47 |
| Msa0747260 | Msa0747270 | 0.860251 | 2.352909e-63 | -8.615850e-47 |
| Msa0747270 | Msa0751850 | 0.814619 | 1.405193e-51 | -8.615850e-47 |
| Msa0747270 | Msa0756460 | 0.802483 | 5.491560e-49 | -8.615850e-47 |
| Msa0747270 | Msa0768370 | 0.808940 | 2.419239e-50 | -8.615850e-47 |
| Msa0747270 | Msa0769980 | 0.807510 | 4.880637e-50 | -8.615850e-47 |
| Msa0747270 | Msa0777230 | 0.818529 | 1.869077e-52 | -8.615850e-47 |
| Msa0747270 | Msa0784380 | 0.821620 | 3.665353e-53 | -8.615850e-47 |
| Msa0747270 | Msa0801730 | 0.806362 | 8.533861e-50 | -8.615850e-47 |
| Msa0747270 | Msa0817460 | 0.832048 | 1.180263e-55 | -8.615850e-47 |
| Msa0747270 | Msa0820850 | 0.826266 | 2.980566e-54 | -8.615850e-47 |
| Msa0747270 | Msa0831850 | 0.822028 | 2.949519e-53 | -8.615850e-47 |
| Msa0747270 | Msa0844420 | 0.802070 | 6.677839e-49 | -8.615850e-47 |
| Msa0747270 | Msa0844450 | 0.816881 | 4.400096e-52 | -8.615850e-47 |
| Msa0747270 | Msa0844490 | 0.830115 | 3.521371e-55 | -8.615850e-47 |
| Msa0747270 | Msa0849030 | 0.818161 | 2.264947e-52 | -8.615850e-47 |
| Msa0747270 | Msa0857640 | 0.814172 | 1.763861e-51 | -8.615850e-47 |
| Msa0747270 | Msa0861130 | 0.822937 | 1.812972e-53 | -8.615850e-47 |
| Msa0747270 | Msa0864470 | -0.810326 | 1.218639e-50 | -8.615850e-47 |
| Msa0747270 | Msa0869120 | 0.803643 | 3.160771e-49 | -8.615850e-47 |
| Msa0747270 | Msa0876580 | 0.820124 | 8.096013e-53 | -8.615850e-47 |
| Msa0747270 | Msa0877250 | 0.805515 | 1.286269e-49 | -8.615850e-47 |
| Msa0747270 | Msa0897330 | 0.815167 | 1.062007e-51 | -8.615850e-47 |
| Msa0747270 | Msa0927380 | 0.805699 | 1.176924e-49 | -8.615850e-47 |
| Msa0747270 | Msa0931520 | 0.804231 | 2.385998e-49 | -8.615850e-47 |
| Msa0747270 | Msa0936300 | 0.826749 | 2.286866e-54 | -8.615850e-47 |
| Msa0747270 | Msa0942550 | -0.823881 | 1.090983e-53 | -8.615850e-47 |
| Msa0747270 | Msa0942560 | -0.811919 | 5.501655e-51 | -8.615850e-47 |
| Msa0747270 | Msa0948320 | 0.802641 | 5.093883e-49 | -8.615850e-47 |
| Msa0747270 | Msa0960740 | 0.804658 | 1.943325e-49 | -8.615850e-47 |
| Msa0747270 | Msa0962840 | 0.813307 | 2.734683e-51 | -8.615850e-47 |
| Msa0747270 | Msa0966750 | 0.831948 | 1.249624e-55 | -8.615850e-47 |
| Msa0747270 | Msa0969810 | 0.800403 | 1.464859e-48 | -8.615850e-47 |
| Msa0747270 | Msa0973100 | 0.834803 | 2.426216e-56 | -8.615850e-47 |
| Msa0747270 | Msa0994370 | 0.815540 | 8.773497e-52 | -8.615850e-47 |
| Msa0747270 | Msa1000890 | 0.816269 | 6.034536e-52 | -8.615850e-47 |
| Msa0747270 | Msa1000900 | 0.816489 | 5.387502e-52 | -8.615850e-47 |
| Msa0747270 | Msa1001390 | 0.810197 | 1.299041e-50 | -8.615850e-47 |
| Msa0747270 | Msa1002850 | 0.814303 | 1.649953e-51 | -8.615850e-47 |
| Msa0747270 | Msa1003620 | 0.810386 | 1.182764e-50 | -8.615850e-47 |
| Msa0747270 | Msa1012830 | 0.818109 | 2.326748e-52 | -8.615850e-47 |
| Msa0747270 | Msa1014540 | 0.820912 | 5.337604e-53 | -8.615850e-47 |
| Msa0747270 | Msa1014730 | 0.803752 | 3.000375e-49 | -8.615850e-47 |
| Msa0747270 | Msa1029080 | -0.800423 | 1.451068e-48 | -8.615850e-47 |
| Msa0747270 | Msa1036610 | 0.832226 | 1.067005e-55 | -8.615850e-47 |
| Msa0747270 | Msa1037420 | 0.800440 | 1.439819e-48 | -8.615850e-47 |
| Msa0747270 | Msa1046460 | 0.804106 | 2.533018e-49 | -8.615850e-47 |
| Msa0747270 | Msa1054150 | -0.832396 | 9.680220e-56 | -8.615850e-47 |
| Msa0747270 | Msa1063510 | 0.818243 | 2.169567e-52 | -8.615850e-47 |
| Msa0747270 | Msa1064250 | 0.800293 | 1.542395e-48 | -8.615850e-47 |
| Msa0747270 | Msa1075220 | -0.808394 | 3.164695e-50 | -8.615850e-47 |
| Msa0747270 | Msa1079430 | 0.800846 | 1.189957e-48 | -8.615850e-47 |
| Msa0747270 | Msa1090260 | 0.804438 | 2.159796e-49 | -8.615850e-47 |
| Msa0747270 | Msa1109680 | 0.800705 | 1.271508e-48 | -8.615850e-47 |
| Msa0747270 | Msa1111870 | 0.819097 | 1.388882e-52 | -8.615850e-47 |
| Msa0747270 | Msa1113170 | 0.815376 | 9.543379e-52 | -8.615850e-47 |
| Msa0747270 | Msa1119480 | 0.821489 | 3.929583e-53 | -8.615850e-47 |
| Msa0747270 | Msa1133230 | 0.805407 | 1.354704e-49 | -8.615850e-47 |
| Msa0747270 | Msa1137570 | 0.824313 | 8.636785e-54 | -8.615850e-47 |
| Msa0747270 | Msa1142670 | 0.803196 | 3.912165e-49 | -8.615850e-47 |
| Msa0747270 | Msa1144040 | 0.800900 | 1.160337e-48 | -8.615850e-47 |
| Msa0747270 | Msa1144720 | -0.807146 | 5.829270e-50 | -8.615850e-47 |
| Msa0747270 | Msa1154280 | 0.803465 | 3.441376e-49 | -8.615850e-47 |
| Msa0747270 | Msa1162550 | -0.804095 | 2.545803e-49 | -8.615850e-47 |
| Msa0747270 | Msa1174040 | 0.834709 | 2.562172e-56 | -8.615850e-47 |
| Msa0747270 | Msa1181250 | 0.818978 | 1.477798e-52 | -8.615850e-47 |
| Msa0747270 | Msa1181330 | 0.811964 | 5.379001e-51 | -8.615850e-47 |
| Msa0747270 | Msa1183100 | -0.807507 | 4.887088e-50 | -8.615850e-47 |
| Msa0747270 | Msa1202770 | -0.800066 | 1.715567e-48 | -8.615850e-47 |
| Msa0747270 | Msa1210020 | 0.826837 | 2.178401e-54 | -8.615850e-47 |
| Msa0747270 | Msa1211140 | -0.823475 | 1.357835e-53 | -8.615850e-47 |
| Msa0747270 | Msa1224210 | 0.805738 | 1.154500e-49 | -8.615850e-47 |
| Msa0747270 | Msa1232740 | 0.825850 | 3.743070e-54 | -8.615850e-47 |
| Msa0747270 | Msa1259590 | -0.808121 | 3.618642e-50 | -8.615850e-47 |
| Msa0747270 | Msa1263290 | -0.801608 | 8.310209e-49 | -8.615850e-47 |
| Msa0747270 | Msa1270660 | 0.816637 | 4.991528e-52 | -8.615850e-47 |
| Msa0747270 | Msa1277660 | 0.824833 | 6.514512e-54 | -8.615850e-47 |
| Msa0747270 | Msa1284680 | 0.830529 | 2.790175e-55 | -8.615850e-47 |
| Msa0747270 | Msa1286800 | 0.819211 | 1.308598e-52 | -8.615850e-47 |
| Msa0747270 | Msa1287190 | 0.816595 | 5.100001e-52 | -8.615850e-47 |
| Msa0747270 | Msa1295330 | 0.800725 | 1.259738e-48 | -8.615850e-47 |
| Msa0747270 | Msa1298510 | 0.830759 | 2.450058e-55 | -8.615850e-47 |
| Msa0747270 | Msa1299290 | -0.816769 | 4.661397e-52 | -8.615850e-47 |
| Msa0747270 | Msa1305350 | 0.803433 | 3.494300e-49 | -8.615850e-47 |
| Msa0747270 | Msa1313320 | 0.828893 | 6.977721e-55 | -8.615850e-47 |
| Msa0747270 | Msa1332040 | -0.811855 | 5.680553e-51 | -8.615850e-47 |
| Msa0747270 | Msa1345220 | 0.848834 | 4.761420e-60 | -8.615850e-47 |
| Msa0747270 | Msa1348600 | 0.804848 | 1.773511e-49 | -8.615850e-47 |
| Msa0747270 | Msa1348760 | 0.810720 | 1.001897e-50 | -8.615850e-47 |
| Msa0747270 | Msa1353470 | 0.801693 | 7.983657e-49 | -8.615850e-47 |
| Msa0747270 | Msa1358670 | 0.821193 | 4.599928e-53 | -8.615850e-47 |
| Msa0747270 | Msa1373030 | 0.814596 | 1.421532e-51 | -8.615850e-47 |
| Msa0747270 | Msa1390700 | 0.802920 | 4.461631e-49 | -8.615850e-47 |
| Msa0747270 | Msa1392910 | 0.801935 | 7.119654e-49 | -8.615850e-47 |
| Msa0747270 | Msa1394310 | 0.806536 | 7.842570e-50 | -8.615850e-47 |
| Msa0747270 | Msa1397120 | 0.819928 | 8.977100e-53 | -8.615850e-47 |
| Msa0747270 | Msa1403340 | 0.828033 | 1.125849e-54 | -8.615850e-47 |
| Msa0747270 | Msa1403890 | 0.814643 | 1.387525e-51 | -8.615850e-47 |
| Msa0747270 | Msa1409880 | 0.808472 | 3.046271e-50 | -8.615850e-47 |
| Msa0747270 | Msa1427230 | 0.824545 | 7.618753e-54 | -8.615850e-47 |
| Msa0747270 | Msa1449340 | -0.800199 | 1.612184e-48 | -8.615850e-47 |
| Msa0747270 | Msa1451620 | -0.814159 | 1.775468e-51 | -8.615850e-47 |
| Msa0747270 | Msa1454950 | 0.810330 | 1.216410e-50 | -8.615850e-47 |
| Msa0747270 | Msa1460830 | 0.818101 | 2.336830e-52 | -8.615850e-47 |
| Msa0747270 | Msa1462070 | 0.854614 | 1.094710e-61 | -8.615850e-47 |
| Msa0747270 | Msa1465850 | 0.818540 | 1.858925e-52 | -8.615850e-47 |
| Msa0129190 | Msa0747270 | -0.812255 | 4.648429e-51 | -8.615850e-47 |
| Msa0142290 | Msa0747270 | 0.804044 | 2.608915e-49 | -8.615850e-47 |
| Msa0145190 | Msa0747270 | 0.808646 | 2.796439e-50 | -8.615850e-47 |
| Msa0147250 | Msa0747270 | 0.803455 | 3.458306e-49 | -8.615850e-47 |
| Msa0150840 | Msa0747270 | 0.806430 | 8.256602e-50 | -8.615850e-47 |
| Msa0171540 | Msa0747270 | 0.817263 | 3.609785e-52 | -8.615850e-47 |
| Msa0178930 | Msa0747270 | 0.805613 | 1.226835e-49 | -8.615850e-47 |
| Msa0180500 | Msa0747270 | 0.818854 | 1.577616e-52 | -8.615850e-47 |
| Msa0183010 | Msa0747270 | -0.808958 | 2.397724e-50 | -8.615850e-47 |
| Msa0187230 | Msa0747270 | 0.851515 | 8.438441e-61 | -8.615850e-47 |
| Msa0187250 | Msa0747270 | 0.870563 | 1.327535e-66 | -8.615850e-47 |
| Msa0197660 | Msa0747270 | 0.807237 | 5.575454e-50 | -8.615850e-47 |
| Msa0198910 | Msa0747270 | 0.803127 | 4.043675e-49 | -8.615850e-47 |
| Msa0216530 | Msa0747270 | 0.808172 | 3.528642e-50 | -8.615850e-47 |
| Msa0217680 | Msa0747270 | 0.809064 | 2.275729e-50 | -8.615850e-47 |
| Msa0223010 | Msa0747270 | 0.811592 | 6.480237e-51 | -8.615850e-47 |
| Msa0226180 | Msa0747270 | 0.807324 | 5.342669e-50 | -8.615850e-47 |
| Msa0226530 | Msa0747270 | 0.819202 | 1.314522e-52 | -8.615850e-47 |
| Msa0229380 | Msa0747270 | 0.816180 | 6.316479e-52 | -8.615850e-47 |
| Msa0230560 | Msa0747270 | 0.833224 | 6.031082e-56 | -8.615850e-47 |
| Msa0230640 | Msa0747270 | -0.813913 | 2.012117e-51 | -8.615850e-47 |
| Msa0376910 | Msa0747270 | 0.808036 | 3.772119e-50 | -8.615850e-47 |
| Msa0381610 | Msa0747270 | -0.805889 | 1.073602e-49 | -8.615850e-47 |
| Msa0387280 | Msa0747270 | 0.814848 | 1.249803e-51 | -8.615850e-47 |
| Msa0394340 | Msa0747270 | 0.810229 | 1.278542e-50 | -8.615850e-47 |
| Msa0405370 | Msa0747270 | 0.815562 | 8.676478e-52 | -8.615850e-47 |
| Msa0412840 | Msa0747270 | 0.830824 | 2.362488e-55 | -8.615850e-47 |
| Msa0413410 | Msa0747270 | 0.810917 | 9.079291e-51 | -8.615850e-47 |
| Msa0425790 | Msa0747270 | 0.809013 | 2.333635e-50 | -8.615850e-47 |
| Msa0433410 | Msa0747270 | -0.800015 | 1.757051e-48 | -8.615850e-47 |
| Msa0434180 | Msa0747270 | 0.826741 | 2.296565e-54 | -8.615850e-47 |
| Msa0435690 | Msa0747270 | 0.813739 | 2.197762e-51 | -8.615850e-47 |
| Msa0442200 | Msa0747270 | 0.808742 | 2.666444e-50 | -8.615850e-47 |
| Msa0457510 | Msa0747270 | 0.826527 | 2.584036e-54 | -8.615850e-47 |
| Msa0464100 | Msa0747270 | 0.805100 | 1.571312e-49 | -8.615850e-47 |
| Msa0464120 | Msa0747270 | 0.802712 | 4.925952e-49 | -8.615850e-47 |
| Msa0469940 | Msa0747270 | -0.803085 | 4.125674e-49 | -8.615850e-47 |
| Msa0471900 | Msa0747270 | 0.805306 | 1.422870e-49 | -8.615850e-47 |
| Msa0479340 | Msa0747270 | 0.806629 | 7.496579e-50 | -8.615850e-47 |
| Msa0239800 | Msa0747270 | 0.808982 | 2.369678e-50 | -8.615850e-47 |
| Msa0241140 | Msa0747270 | 0.804226 | 2.391844e-49 | -8.615850e-47 |
| Msa0249560 | Msa0747270 | 0.815578 | 8.605982e-52 | -8.615850e-47 |
| Msa0251640 | Msa0747270 | 0.813456 | 2.536714e-51 | -8.615850e-47 |
| Msa0257500 | Msa0747270 | 0.810506 | 1.114151e-50 | -8.615850e-47 |
| Msa0259210 | Msa0747270 | 0.815726 | 7.975163e-52 | -8.615850e-47 |
| Msa0271360 | Msa0747270 | 0.807604 | 4.660057e-50 | -8.615850e-47 |
| Msa0285450 | Msa0747270 | 0.813013 | 3.172974e-51 | -8.615850e-47 |
| Msa0288100 | Msa0747270 | 0.830413 | 2.978925e-55 | -8.615850e-47 |
| Msa0306210 | Msa0747270 | -0.824233 | 9.018664e-54 | -8.615850e-47 |
| Msa0319170 | Msa0747270 | 0.822630 | 2.136995e-53 | -8.615850e-47 |
| Msa0321310 | Msa0747270 | 0.811297 | 7.512080e-51 | -8.615850e-47 |
| Msa0326520 | Msa0747270 | 0.808133 | 3.597228e-50 | -8.615850e-47 |
| Msa0336320 | Msa0747270 | 0.816599 | 5.090424e-52 | -8.615850e-47 |
| Msa0340690 | Msa0747270 | 0.801536 | 8.598112e-49 | -8.615850e-47 |
| Msa0342750 | Msa0747270 | 0.801343 | 9.416047e-49 | -8.615850e-47 |
| Msa0343850 | Msa0747270 | 0.800649 | 1.305495e-48 | -8.615850e-47 |
| Msa0344690 | Msa0747270 | -0.804332 | 2.273382e-49 | -8.615850e-47 |
| Msa0359030 | Msa0747270 | 0.805187 | 1.506861e-49 | -8.615850e-47 |
| Msa0512750 | Msa0747270 | 0.800374 | 1.485192e-48 | -8.615850e-47 |
| Msa0518380 | Msa0747270 | 0.814370 | 1.595114e-51 | -8.615850e-47 |
| Msa0521740 | Msa0747270 | 0.822339 | 2.497577e-53 | -8.615850e-47 |
| Msa0523940 | Msa0747270 | 0.821061 | 4.932569e-53 | -8.615850e-47 |
| Msa0529040 | Msa0747270 | 0.819267 | 1.270467e-52 | -8.615850e-47 |
| Msa0530400 | Msa0747270 | 0.800432 | 1.445100e-48 | -8.615850e-47 |
| Msa0545700 | Msa0747270 | 0.827857 | 1.240750e-54 | -8.615850e-47 |
| Msa0585230 | Msa0747270 | 0.814214 | 1.726613e-51 | -8.615850e-47 |
| Msa0594560 | Msa0747270 | 0.805200 | 1.497521e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747270 | MtrunA17_Chr1g0192201 | 94.030 | 134 | 3 | 1 | 2 | 130 | 34 | 167 | 4.21e-86 | 250 |
| Msa0747270 | MtrunA17_Chr1g0192171 | 93.284 | 134 | 4 | 1 | 2 | 130 | 34 | 167 | 3.20e-85 | 248 |
| Msa0747270 | MtrunA17_Chr2g0295871 | 82.090 | 134 | 18 | 2 | 2 | 130 | 34 | 166 | 7.37e-72 | 214 |
| Msa0747270 | MtrunA17_Chr1g0192161 | 92.920 | 113 | 3 | 1 | 3 | 110 | 25 | 137 | 3.46e-69 | 206 |
| Msa0747270 | MtrunA17_Chr6g0479151 | 79.688 | 128 | 20 | 2 | 2 | 124 | 34 | 160 | 1.85e-65 | 197 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0747270 | AT3G16640.1 | 71.642 | 134 | 33 | 1 | 2 | 130 | 34 | 167 | 1.04e-63 | 194 |
| Msa0747270 | AT3G05540.1 | 71.111 | 135 | 32 | 3 | 2 | 130 | 34 | 167 | 5.55e-57 | 177 |
Find 40 sgRNAs with CRISPR-Local
Find 153 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGACATTGTTGACACTTTC+AGG | 0.139441 | 5_1:-70943293 | Msa0747270:CDS |
| AATTGTAGGTCTTTGAGTTT+AGG | 0.257674 | 5_1:+70943129 | None:intergenic |
| ATTGTAGGTCTTTGAGTTTA+GGG | 0.290821 | 5_1:+70943130 | None:intergenic |
| GTTGCTGACATCTAAATTAG+AGG | 0.319278 | 5_1:-70943208 | Msa0747270:CDS |
| TGTTGACACTTTCAGGCTTC+AGG | 0.327729 | 5_1:-70943286 | Msa0747270:CDS |
| TTTAATACTAGTATTGTGTT+TGG | 0.344075 | 5_1:-70942586 | Msa0747270:intron |
| GTTGGTTTGGTAGGTTTGTT+TGG | 0.362866 | 5_1:-70942309 | Msa0747270:intron |
| GATGAAATACATACAATTGT+AGG | 0.374980 | 5_1:+70943115 | None:intergenic |
| CTACTTTGCCTATGGCTTGA+AGG | 0.378916 | 5_1:-70942916 | Msa0747270:CDS |
| AATTGCTTCTTATCAAAAGC+TGG | 0.428621 | 5_1:+70943258 | None:intergenic |
| CCTTGTGTTTGCTTACTACA+AGG | 0.455642 | 5_1:-70942964 | Msa0747270:CDS |
| TAGGCAAAGTAGAGAAAAGT+TGG | 0.474181 | 5_1:+70942927 | None:intergenic |
| TATTTGCAGTGGGTTGTTCA+AGG | 0.483236 | 5_1:-70943402 | Msa0747270:intron |
| GGTCTTTGAGTTTAGGGAGA+AGG | 0.500494 | 5_1:+70943136 | None:intergenic |
| GGAGCAGTGGATGTGAATAT+TGG | 0.501116 | 5_1:-70943381 | Msa0747270:CDS |
| GGTGCTAACCCTTCTGCTGA+GGG | 0.509671 | 5_1:-70943360 | Msa0747270:CDS |
| AAGATGAATGTGTTCTATGC+CGG | 0.514411 | 5_1:+70940859 | Msa0747250:intron |
| TGCTGAAAAGATTGGTGACC+CGG | 0.516912 | 5_1:-70940878 | Msa0747270:CDS |
| CTTGATTTCCTTCAAGCCAT+AGG | 0.517168 | 5_1:+70942908 | None:intergenic |
| ATTCTTAATCGATAGTACTC+TGG | 0.532748 | 5_1:-70942839 | Msa0747270:intron |
| TCGTCACCACCCTCAGCAGA+AGG | 0.538139 | 5_1:+70943351 | None:intergenic |
| GTGTTTGCTTACTACAAGGA+TGG | 0.538874 | 5_1:-70942960 | Msa0747270:CDS |
| TGGTGCTAACCCTTCTGCTG+AGG | 0.553542 | 5_1:-70943361 | Msa0747270:CDS |
| GGGGAGAGCATGCATGATGA+TGG | 0.565967 | 5_1:-70942990 | Msa0747270:CDS |
| GTTGGCAACGGAACGGAACT+CGG | 0.570635 | 5_1:-70940910 | Msa0747270:CDS |
| GGTGGAGATGCTGAAAAGAT+TGG | 0.573770 | 5_1:-70940886 | Msa0747270:CDS |
| AACGGAACGGAACTCGGAGG+TGG | 0.578369 | 5_1:-70940904 | Msa0747270:CDS |
| TTAATGATGTAGGTTGGCAA+CGG | 0.585465 | 5_1:-70940922 | Msa0747270:intron |
| TTCTGCTGAGGGTGGTGACG+AGG | 0.592413 | 5_1:-70943349 | Msa0747270:CDS |
| GTAGAGAAAAGTTGGATCAG+TGG | 0.605758 | 5_1:+70942935 | None:intergenic |
| AGATGAATGTGTTCTATGCC+GGG | 0.605979 | 5_1:+70940860 | Msa0747250:intron |
| GCTAACCCTTCTGCTGAGGG+TGG | 0.615863 | 5_1:-70943357 | Msa0747270:CDS |
| CGTCACCACCCTCAGCAGAA+GGG | 0.628440 | 5_1:+70943352 | None:intergenic |
| CCTTGTAGTAAGCAAACACA+AGG | 0.635355 | 5_1:+70942964 | None:intergenic |
| GTGGGTTGTTCAAGGAGCAG+TGG | 0.636439 | 5_1:-70943394 | Msa0747270:CDS |
| GATGTAGGTTGGCAACGGAA+CGG | 0.639480 | 5_1:-70940917 | Msa0747270:intron |
| GAGGGTGGTGACGAGGATGA+CGG | 0.661706 | 5_1:-70943342 | Msa0747270:CDS |
| ATATTGTTCTCAGAGCAACA+TGG | 0.711223 | 5_1:-70942734 | Msa0747270:intron |
| GGCAACGGAACGGAACTCGG+AGG | 0.733884 | 5_1:-70940907 | Msa0747270:CDS |
| TTGTGTTTGGAAACGCAGCG+TGG | 0.750352 | 5_1:-70942573 | Msa0747270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATTTATGATCATATATT+TGG | + | chr5_1:70941222-70941241 | Msa0747250:intron | 10.0% |
| !! | AAAAAAAAAAAAGAAGAAGA+AGG | + | chr5_1:70941034-70941053 | Msa0747250:intron | 15.0% |
| !! | AAAAAAAAACACACATATAT+AGG | - | chr5_1:70941070-70941089 | Msa0747270:intron | 15.0% |
| !! | ATTATGGTAAATCAATTAAT+TGG | + | chr5_1:70941105-70941124 | Msa0747250:intron | 15.0% |
| !! | ATTATAAAATTTCAGTAGTA+TGG | - | chr5_1:70941966-70941985 | Msa0747270:intron | 15.0% |
| !! | TTAATATAATCTATGAATGA+AGG | + | chr5_1:70942210-70942229 | None:intergenic | 15.0% |
| !! | AAAACTAAAATTAATTCAAC+TGG | - | chr5_1:70942906-70942925 | Msa0747270:intron | 15.0% |
| !! | TTTAATTCAAATATAACAAG+CGG | - | chr5_1:70942959-70942978 | Msa0747270:CDS | 15.0% |
| !! | AAATAAACAAATCAAGTAAT+TGG | - | chr5_1:70943046-70943065 | Msa0747270:intron | 15.0% |
| !!! | ACATTTACTTACTTAATTTT+GGG | + | chr5_1:70943085-70943104 | None:intergenic | 15.0% |
| !!! | CGAACATTTATTTTCATATT+AGG | - | chr5_1:70941156-70941175 | Msa0747270:intron | 20.0% |
| !!! | ATTATCTTTCATCTCTTTTT+TGG | - | chr5_1:70941581-70941600 | Msa0747270:intron | 20.0% |
| !!! | ATTAAGTTTTCTCTTTTTTG+TGG | - | chr5_1:70941608-70941627 | Msa0747270:intron | 20.0% |
| !! | TTTAATACTAGTATTGTGTT+TGG | - | chr5_1:70942087-70942106 | Msa0747270:intron | 20.0% |
| !!! | CATTTACTTACTTAATTTTG+GGG | + | chr5_1:70943084-70943103 | None:intergenic | 20.0% |
| !!! | GACATTTACTTACTTAATTT+TGG | + | chr5_1:70943086-70943105 | None:intergenic | 20.0% |
| !!! | GATTTTTTTGAACTGAAAAA+TGG | - | chr5_1:70943146-70943165 | Msa0747270:CDS | 20.0% |
| !! | TGAATTTAGTGAATGAAATT+TGG | - | chr5_1:70943473-70943492 | Msa0747270:intron | 20.0% |
| ! | AAAAACACACATATATAGGT+AGG | - | chr5_1:70941074-70941093 | Msa0747270:intron | 25.0% |
| !! | ATTACCATTTTACCCTTAAT+GGG | + | chr5_1:70941131-70941150 | Msa0747250:intron | 25.0% |
| !! | AATTACCATTTTACCCTTAA+TGG | + | chr5_1:70941132-70941151 | Msa0747250:intron | 25.0% |
| ! | GATGAAATACATACAATTGT+AGG | + | chr5_1:70941561-70941580 | Msa0747250:intron | 25.0% |
| ! | ACACATTTAGTTATCATGTT+AGG | - | chr5_1:70941794-70941813 | Msa0747270:intron | 25.0% |
| ! | GAGTTTACTATTCTCTAATT+AGG | - | chr5_1:70941891-70941910 | Msa0747270:intron | 25.0% |
| ! | TTTACTATTCTCTAATTAGG+AGG | - | chr5_1:70941894-70941913 | Msa0747270:intron | 25.0% |
| ! | AAATTTCAGTAGTATGGTTA+TGG | - | chr5_1:70941972-70941991 | Msa0747270:intron | 25.0% |
| ! | AGAAAAAAAAAAGTGAGTTG+TGG | + | chr5_1:70942064-70942083 | None:intergenic | 25.0% |
| !! | CATTTTCAATTGATTAGCAT+TGG | + | chr5_1:70942268-70942287 | None:intergenic | 25.0% |
| !!! | GTTATCTTCTTTGTTATTGT+TGG | - | chr5_1:70942346-70942365 | Msa0747270:intron | 25.0% |
| !! | TAACAGTTCTAATTAGTTTC+CGG | - | chr5_1:70942610-70942629 | Msa0747270:intron | 25.0% |
| ! | TATATCACCACAAATTGTAT+CGG | - | chr5_1:70942655-70942674 | Msa0747270:intron | 25.0% |
| ! | GGAAACTAGTATTATAGAAA+TGG | - | chr5_1:70942692-70942711 | Msa0747270:intron | 25.0% |
| ! | AGATTAACATGAATGTCTTA+TGG | - | chr5_1:70942717-70942736 | Msa0747270:intron | 25.0% |
| ! | AATTGATTACATTACGATCT+TGG | - | chr5_1:70943006-70943025 | Msa0747270:intron | 25.0% |
| ! | TGAAACAAAATGAGATAGAA+AGG | - | chr5_1:70943232-70943251 | Msa0747270:intron | 25.0% |
| ! | ACAAGAAGCAAATTATATGA+TGG | - | chr5_1:70943278-70943297 | Msa0747270:CDS | 25.0% |
| ! | GTCAATCAACAACTATATAA+AGG | - | chr5_1:70943336-70943355 | Msa0747270:CDS | 25.0% |
| ! | TTTGATTACTACACAAGAAT+TGG | - | chr5_1:70943359-70943378 | Msa0747270:CDS | 25.0% |
| !!! | ATATTGATATGCAGTTTTGT+CGG | + | chr5_1:70943628-70943647 | None:intergenic | 25.0% |
| ! | TACAATCTTCTTAATGATGT+AGG | - | chr5_1:70943741-70943760 | Msa0747270:intron | 25.0% |
| ! | TTACCATTTTACCCTTAATG+GGG | + | chr5_1:70941130-70941149 | Msa0747250:intron | 30.0% |
| CACATCACACAATAAACTTT+AGG | + | chr5_1:70941249-70941268 | Msa0747250:intron | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr5_1:70941418-70941437 | Msa0747250:intron | 30.0% | |
| ! | ATTGTAGGTCTTTGAGTTTA+GGG | + | chr5_1:70941546-70941565 | Msa0747250:intron | 30.0% |
| ! | AATTGTAGGTCTTTGAGTTT+AGG | + | chr5_1:70941547-70941566 | Msa0747250:intron | 30.0% |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | chr5_1:70941663-70941682 | Msa0747270:intron | 30.0% |
| ATTCTTAATCGATAGTACTC+TGG | - | chr5_1:70941834-70941853 | Msa0747270:intron | 30.0% | |
| !! | TAGTCAGTTGTTTGAGTTTT+TGG | - | chr5_1:70942142-70942161 | Msa0747270:intron | 30.0% |
| ATCTATGAATGAAGGTTGTT+TGG | + | chr5_1:70942202-70942221 | None:intergenic | 30.0% | |
| !! | CTTCTTTGTTATTGTTGGTT+TGG | - | chr5_1:70942351-70942370 | Msa0747270:intron | 30.0% |
| !! | TTTGTTATTGTTGGTTTGGT+AGG | - | chr5_1:70942355-70942374 | Msa0747270:intron | 30.0% |
| AGGGACATTTGATTCATAAT+TGG | - | chr5_1:70942499-70942518 | Msa0747270:intron | 30.0% | |
| ATCATATCCGATACAATTTG+TGG | + | chr5_1:70942665-70942684 | None:intergenic | 30.0% | |
| ACAAATTGTATCGGATATGA+TGG | - | chr5_1:70942664-70942683 | Msa0747270:intron | 30.0% | |
| TGTGATATCTTCAACATGAA+TGG | - | chr5_1:70942780-70942799 | Msa0747270:intron | 30.0% | |
| ! | TGTGCAAATGATGATGAAAT+TGG | - | chr5_1:70942803-70942822 | Msa0747270:intron | 30.0% |
| GTCTAAGAGAAAGTCTAATT+TGG | + | chr5_1:70943114-70943133 | None:intergenic | 30.0% | |
| !! | ACTTCATCTCTATTTTGAAG+CGG | - | chr5_1:70943388-70943407 | Msa0747270:CDS | 30.0% |
| ATCTTCTTAATGATGTAGGT+TGG | - | chr5_1:70943745-70943764 | Msa0747270:intron | 30.0% | |
| TGAGAAGAACGGGAAAATAA+AGG | + | chr5_1:70940982-70941001 | Msa0747250:intron | 35.0% | |
| GAAGAAGAAGGAAAACAGAA+CGG | + | chr5_1:70941022-70941041 | Msa0747250:intron | 35.0% | |
| TTACCATAATACCCCCATTA+AGG | - | chr5_1:70941115-70941134 | Msa0747270:intron | 35.0% | |
| TACCATAATACCCCCATTAA+GGG | - | chr5_1:70941116-70941135 | Msa0747270:intron | 35.0% | |
| ! | TACCATTTTACCCTTAATGG+GGG | + | chr5_1:70941129-70941148 | Msa0747250:intron | 35.0% |
| TGTGATGTGATTATTTGCAG+TGG | - | chr5_1:70941260-70941279 | Msa0747270:intron | 35.0% | |
| GTGATGTGATTATTTGCAGT+GGG | - | chr5_1:70941261-70941280 | Msa0747270:intron | 35.0% | |
| TTGACATTGTTGACACTTTC+AGG | - | chr5_1:70941380-70941399 | Msa0747270:intron | 35.0% | |
| GTTGCTGACATCTAAATTAG+AGG | - | chr5_1:70941465-70941484 | Msa0747270:intron | 35.0% | |
| !! | CATCAATGTTGCAGTTTTGT+TGG | - | chr5_1:70941662-70941681 | Msa0747270:intron | 35.0% |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | chr5_1:70941664-70941683 | Msa0747270:intron | 35.0% |
| TAGGCAAAGTAGAGAAAAGT+TGG | + | chr5_1:70941749-70941768 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | chr5_1:70941749-70941768 | Msa0747270:intron | 35.0% |
| ! | CGATAGTACTCTGGTAATTT+TGG | - | chr5_1:70941843-70941862 | Msa0747270:intron | 35.0% |
| ATATTGTTCTCAGAGCAACA+TGG | - | chr5_1:70941939-70941958 | Msa0747270:intron | 35.0% | |
| !! | TCAGTTGTTTGAGTTTTTGG+TGG | - | chr5_1:70942145-70942164 | Msa0747270:intron | 35.0% |
| AACTTAAGATGTGCTTCATC+TGG | - | chr5_1:70942455-70942474 | Msa0747270:intron | 35.0% | |
| ACTTAAGATGTGCTTCATCT+GGG | - | chr5_1:70942456-70942475 | Msa0747270:intron | 35.0% | |
| TCATCGCAATCATCAGATAA+AGG | + | chr5_1:70942572-70942591 | None:intergenic | 35.0% | |
| AAAACTCAGCCAAATTTCAG+AGG | - | chr5_1:70943423-70943442 | Msa0747270:intron | 35.0% | |
| !! | CTTTCAAAGCCTCTGAAATT+TGG | + | chr5_1:70943435-70943454 | None:intergenic | 35.0% |
| !! | CAAATTTCAGAGGCTTTGAA+AGG | - | chr5_1:70943433-70943452 | Msa0747270:intron | 35.0% |
| CAAAAGAATAGACGCAAAAG+AGG | - | chr5_1:70943546-70943565 | Msa0747270:intron | 35.0% | |
| !! | TGCAGTTTTGTCGGAAATAT+TGG | + | chr5_1:70943619-70943638 | None:intergenic | 35.0% |
| ! | TTAATGATGTAGGTTGGCAA+CGG | - | chr5_1:70943751-70943770 | Msa0747270:intron | 35.0% |
| ! | ATGCAAGTTGAGGAAGAAGA+AGG | - | chr5_1:70940873-70940892 | Msa0747270:CDS | 40.0% |
| AGATGAGAAGAAGAGGAAAC+GGG | + | chr5_1:70940949-70940968 | Msa0747250:intron | 40.0% | |
| GAGATGAGAAGAAGAGGAAA+CGG | + | chr5_1:70940950-70940969 | Msa0747250:intron | 40.0% | |
| GAAGAACGGGAAAATAAAGG+AGG | + | chr5_1:70940979-70940998 | Msa0747250:intron | 40.0% | |
| AAGAAGAGAGGTGAGAAGAA+CGG | + | chr5_1:70940993-70941012 | Msa0747250:intron | 40.0% | |
| !! | TACCCTTAATGGGGGTATTA+TGG | + | chr5_1:70941121-70941140 | Msa0747250:intron | 40.0% |
| TACCCCCATTAAGGGTAAAA+TGG | - | chr5_1:70941124-70941143 | Msa0747270:intron | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr5_1:70941271-70941290 | Msa0747270:intron | 40.0% |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr5_1:70941712-70941731 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr5_1:70941709-70941728 | Msa0747270:intron | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr5_1:70941713-70941732 | Msa0747270:intron | 40.0% | |
| GTAGAGAAAAGTTGGATCAG+TGG | + | chr5_1:70941741-70941760 | None:intergenic | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | chr5_1:70941768-70941787 | None:intergenic | 40.0% | |
| !!! | TGAGTTTTTGGTGGTATGTC+TGG | - | chr5_1:70942154-70942173 | Msa0747270:intron | 40.0% |
| !! | TTTTTGGTGGTATGTCTGGT+GGG | - | chr5_1:70942158-70942177 | Msa0747270:intron | 40.0% |
| !! | GTTGGTTTGGTAGGTTTGTT+TGG | - | chr5_1:70942364-70942383 | Msa0747270:intron | 40.0% |
| TCGCAATCATCAGATAAAGG+CGG | + | chr5_1:70942569-70942588 | None:intergenic | 40.0% | |
| ! | ATTGCGATGACATAACTTGC+TGG | - | chr5_1:70942582-70942601 | Msa0747270:intron | 40.0% |
| !! | TTGCGATGACATAACTTGCT+GGG | - | chr5_1:70942583-70942602 | Msa0747270:intron | 40.0% |
| GTATGCAATGCATTGCTAAC+CGG | + | chr5_1:70942632-70942651 | None:intergenic | 40.0% | |
| ! | GTATCGGATATGATGGTGAA+TGG | - | chr5_1:70942671-70942690 | Msa0747270:intron | 40.0% |
| ! | GACTTGCTTTCTTCTTTGCT+TGG | - | chr5_1:70943206-70943225 | Msa0747270:CDS | 40.0% |
| TTGTACTACCTGTTGATGTG+GGG | + | chr5_1:70943262-70943281 | None:intergenic | 40.0% | |
| CTTGTACTACCTGTTGATGT+GGG | + | chr5_1:70943263-70943282 | None:intergenic | 40.0% | |
| TCTTGTACTACCTGTTGATG+TGG | + | chr5_1:70943264-70943283 | None:intergenic | 40.0% | |
| ! | CAAGTTGAGGAAGAAGAAGG+AGG | - | chr5_1:70940876-70940895 | Msa0747270:CDS | 45.0% |
| AGAAGAAGAGGAAACGGGTA+CGG | + | chr5_1:70940944-70940963 | Msa0747250:intron | 45.0% | |
| GGGAAAATAAAGGAGGTCGA+GGG | + | chr5_1:70940972-70940991 | Msa0747250:intron | 45.0% | |
| AGAAGAGAGGTGAGAAGAAC+GGG | + | chr5_1:70940992-70941011 | Msa0747250:intron | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr5_1:70941292-70941311 | Msa0747270:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr5_1:70941387-70941406 | Msa0747270:intron | 45.0% | |
| ! | GGTCTTTGAGTTTAGGGAGA+AGG | + | chr5_1:70941540-70941559 | Msa0747250:intron | 45.0% |
| CTACTTTGCCTATGGCTTGA+AGG | - | chr5_1:70941757-70941776 | Msa0747270:intron | 45.0% | |
| !!! | GTTTTTGGTGGTATGTCTGG+TGG | - | chr5_1:70942157-70942176 | Msa0747270:intron | 45.0% |
| TGATGCCAAGACTGCTAGAT+AGG | - | chr5_1:70942479-70942498 | Msa0747270:intron | 45.0% | |
| GATGCCAAGACTGCTAGATA+GGG | - | chr5_1:70942480-70942499 | Msa0747270:intron | 45.0% | |
| ATGTCCCTATCTAGCAGTCT+TGG | + | chr5_1:70942487-70942506 | None:intergenic | 45.0% | |
| AATCATCAGATAAAGGCGGC+GGG | + | chr5_1:70942565-70942584 | None:intergenic | 45.0% | |
| CAATCATCAGATAAAGGCGG+CGG | + | chr5_1:70942566-70942585 | None:intergenic | 45.0% | |
| !! | TGCGATGACATAACTTGCTG+GGG | - | chr5_1:70942584-70942603 | Msa0747270:intron | 45.0% |
| ACGATCTTGGCAAGCTACAT+AGG | - | chr5_1:70943019-70943038 | Msa0747270:intron | 45.0% | |
| AAGGAAATCCCCACATCAAC+AGG | - | chr5_1:70943251-70943270 | Msa0747270:intron | 45.0% | |
| GGTGGAGATGCTGAAAAGAT+TGG | - | chr5_1:70943787-70943806 | Msa0747270:intron | 45.0% | |
| ! | TGCTGAAAAGATTGGTGACC+CGG | - | chr5_1:70943795-70943814 | Msa0747270:intron | 45.0% |
| !!! | TAAGTATTTATTATTTTAAA+TGG | + | chr5_1:70942303-70942322 | None:intergenic | 5.0% |
| !!! | TTATGTTTTATAATAAATTT+CGG | - | chr5_1:70943584-70943603 | Msa0747270:intron | 5.0% |
| AACGGGTACGGGAGAAAGAA+GGG | + | chr5_1:70940932-70940951 | Msa0747250:intron | 50.0% | |
| AAACGGGTACGGGAGAAAGA+AGG | + | chr5_1:70940933-70940952 | Msa0747250:intron | 50.0% | |
| GAAGAAGAGGAAACGGGTAC+GGG | + | chr5_1:70940943-70940962 | Msa0747250:intron | 50.0% | |
| TCGAGGGAGATGAGAAGAAG+AGG | + | chr5_1:70940956-70940975 | Msa0747250:intron | 50.0% | |
| CGGGAAAATAAAGGAGGTCG+AGG | + | chr5_1:70940973-70940992 | Msa0747250:intron | 50.0% | |
| GAACGGACAGAGAAGAAGAG+AGG | + | chr5_1:70941005-70941024 | Msa0747250:intron | 50.0% | |
| TTGTGTTTGGAAACGCAGCG+TGG | - | chr5_1:70942100-70942119 | Msa0747270:intron | 50.0% | |
| ! | GATGTAGGTTGGCAACGGAA+CGG | - | chr5_1:70943756-70943775 | Msa0747270:intron | 50.0% |
| ACGGGTACGGGAGAAAGAAG+GGG | + | chr5_1:70940931-70940950 | Msa0747250:intron | 55.0% | |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr5_1:70941279-70941298 | Msa0747270:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCTG+AGG | - | chr5_1:70941312-70941331 | Msa0747270:intron | 55.0% |
| GGTGCTAACCCTTCTGCTGA+GGG | - | chr5_1:70941313-70941332 | Msa0747270:intron | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr5_1:70941683-70941702 | Msa0747270:intron | 55.0% |
| GTTGGCAACGGAACGGAACT+CGG | - | chr5_1:70943763-70943782 | Msa0747270:intron | 55.0% | |
| GGGTACGGGAGAAAGAAGGG+GGG | + | chr5_1:70940929-70940948 | Msa0747250:intron | 60.0% | |
| CGGGTACGGGAGAAAGAAGG+GGG | + | chr5_1:70940930-70940949 | Msa0747250:intron | 60.0% | |
| GCTAACCCTTCTGCTGAGGG+TGG | - | chr5_1:70941316-70941335 | Msa0747270:intron | 60.0% | |
| CGTCACCACCCTCAGCAGAA+GGG | + | chr5_1:70941324-70941343 | Msa0747250:intron | 60.0% | |
| TCGTCACCACCCTCAGCAGA+AGG | + | chr5_1:70941325-70941344 | Msa0747250:intron | 60.0% | |
| ! | TTCTGCTGAGGGTGGTGACG+AGG | - | chr5_1:70941324-70941343 | Msa0747270:intron | 60.0% |
| ! | GAGGGTGGTGACGAGGATGA+CGG | - | chr5_1:70941331-70941350 | Msa0747270:intron | 60.0% |
| AACGGAACGGAACTCGGAGG+TGG | - | chr5_1:70943769-70943788 | Msa0747270:intron | 60.0% | |
| GGCAACGGAACGGAACTCGG+AGG | - | chr5_1:70943766-70943785 | Msa0747270:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 70940873 | 70943822 | 70940873 | ID=Msa0747270;Name=Msa0747270 |
| chr5_1 | mRNA | 70940873 | 70943822 | 70940873 | ID=Msa0747270-mRNA-1;Parent=Msa0747270;Name=Msa0747270-mRNA-1;_AED=0.54;_eAED=0.54;_QI=0|0.12|0|0.55|1|1|9|0|180 |
| chr5_1 | exon | 70943817 | 70943822 | 70943817 | ID=Msa0747270-mRNA-1:exon:21004;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70943257 | 70943415 | 70943257 | ID=Msa0747270-mRNA-1:exon:21003;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70943129 | 70943241 | 70943129 | ID=Msa0747270-mRNA-1:exon:21002;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70942909 | 70943019 | 70942909 | ID=Msa0747270-mRNA-1:exon:21001;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70942840 | 70942846 | 70942840 | ID=Msa0747270-mRNA-1:exon:21000;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70942735 | 70942743 | 70942735 | ID=Msa0747270-mRNA-1:exon:20999;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70942529 | 70942597 | 70942529 | ID=Msa0747270-mRNA-1:exon:20998;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70942310 | 70942318 | 70942310 | ID=Msa0747270-mRNA-1:exon:20997;Parent=Msa0747270-mRNA-1 |
| chr5_1 | exon | 70940873 | 70940932 | 70940873 | ID=Msa0747270-mRNA-1:exon:20996;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70943817 | 70943822 | 70943817 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70943257 | 70943415 | 70943257 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70943129 | 70943241 | 70943129 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70942909 | 70943019 | 70942909 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70942840 | 70942846 | 70942840 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70942735 | 70942743 | 70942735 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70942529 | 70942597 | 70942529 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70942310 | 70942318 | 70942310 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| chr5_1 | CDS | 70940873 | 70940932 | 70940873 | ID=Msa0747270-mRNA-1:cds;Parent=Msa0747270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
