Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187230 | XP_003591148.1 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 3.22e-116 | 336 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187230 | sp|Q5J907|TCTP_ELAGV | 90.476 | 168 | 16 | 0 | 1 | 168 | 1 | 168 | 2.09e-109 | 311 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187230 | G7I8P9 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 1.54e-116 | 336 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015460 | Msa0187230 | 0.835604 | 1.523286e-56 | -8.615850e-47 |
| Msa0015480 | Msa0187230 | 0.808434 | 3.103132e-50 | -8.615850e-47 |
| Msa0020390 | Msa0187230 | 0.802635 | 5.109620e-49 | -8.615850e-47 |
| Msa0032860 | Msa0187230 | 0.896106 | 5.070380e-76 | -8.615850e-47 |
| Msa0032880 | Msa0187230 | 0.898567 | 4.674864e-77 | -8.615850e-47 |
| Msa0037540 | Msa0187230 | -0.800081 | 1.703941e-48 | -8.615850e-47 |
| Msa0037840 | Msa0187230 | 0.803526 | 3.342282e-49 | -8.615850e-47 |
| Msa0037880 | Msa0187230 | 0.831269 | 1.837112e-55 | -8.615850e-47 |
| Msa0038870 | Msa0187230 | 0.813353 | 2.672566e-51 | -8.615850e-47 |
| Msa0086420 | Msa0187230 | 0.823084 | 1.675881e-53 | -8.615850e-47 |
| Msa0089820 | Msa0187230 | 0.821595 | 3.714783e-53 | -8.615850e-47 |
| Msa0090390 | Msa0187230 | 0.819820 | 9.500205e-53 | -8.615850e-47 |
| Msa0109590 | Msa0187230 | 0.832238 | 1.059600e-55 | -8.615850e-47 |
| Msa0118540 | Msa0187230 | 0.815721 | 7.997620e-52 | -8.615850e-47 |
| Msa0129190 | Msa0187230 | -0.813327 | 2.707474e-51 | -8.615850e-47 |
| Msa0137870 | Msa0187230 | 0.805244 | 1.465898e-49 | -8.615850e-47 |
| Msa0140510 | Msa0187230 | -0.802932 | 4.436069e-49 | -8.615850e-47 |
| Msa0155880 | Msa0187230 | 0.826789 | 2.236744e-54 | -8.615850e-47 |
| Msa0167980 | Msa0187230 | 0.803848 | 2.865776e-49 | -8.615850e-47 |
| Msa0178860 | Msa0187230 | -0.803635 | 3.172843e-49 | -8.615850e-47 |
| Msa0186310 | Msa0187230 | 0.815274 | 1.005339e-51 | -8.615850e-47 |
| Msa0187220 | Msa0187230 | 0.823935 | 1.059586e-53 | -8.615850e-47 |
| Msa0187230 | Msa0187250 | 0.864607 | 1.076351e-64 | -8.615850e-47 |
| Msa0187230 | Msa0189520 | 0.830784 | 2.416756e-55 | -8.615850e-47 |
| Msa0187230 | Msa0197660 | 0.802674 | 5.015935e-49 | -8.615850e-47 |
| Msa0187230 | Msa0217680 | 0.806673 | 7.337030e-50 | -8.615850e-47 |
| Msa0187230 | Msa0226530 | 0.816606 | 5.071834e-52 | -8.615850e-47 |
| Msa0187230 | Msa0230560 | 0.840414 | 8.823368e-58 | -8.615850e-47 |
| Msa0187230 | Msa0233380 | 0.808257 | 3.384252e-50 | -8.615850e-47 |
| Msa0187230 | Msa0239800 | 0.806530 | 7.864542e-50 | -8.615850e-47 |
| Msa0187230 | Msa0256330 | 0.802544 | 5.333946e-49 | -8.615850e-47 |
| Msa0187230 | Msa0257500 | 0.817940 | 2.540240e-52 | -8.615850e-47 |
| Msa0187230 | Msa0259210 | 0.800072 | 1.710460e-48 | -8.615850e-47 |
| Msa0187230 | Msa0261720 | 0.806623 | 7.517850e-50 | -8.615850e-47 |
| Msa0187230 | Msa0268090 | 0.806668 | 7.357651e-50 | -8.615850e-47 |
| Msa0187230 | Msa0271360 | 0.847410 | 1.177282e-59 | -8.615850e-47 |
| Msa0187230 | Msa0290760 | 0.806673 | 7.339318e-50 | -8.615850e-47 |
| Msa0187230 | Msa0295330 | 0.803184 | 3.934659e-49 | -8.615850e-47 |
| Msa0187230 | Msa0309880 | 0.801828 | 7.487605e-49 | -8.615850e-47 |
| Msa0187230 | Msa0319170 | 0.806782 | 6.960162e-50 | -8.615850e-47 |
| Msa0187230 | Msa0336320 | 0.806721 | 7.167798e-50 | -8.615850e-47 |
| Msa0187230 | Msa0340690 | 0.808745 | 2.663590e-50 | -8.615850e-47 |
| Msa0187230 | Msa0347610 | 0.833691 | 4.612067e-56 | -8.615850e-47 |
| Msa0187230 | Msa0369440 | 0.813296 | 2.750518e-51 | -8.615850e-47 |
| Msa0187230 | Msa0376910 | 0.814968 | 1.175953e-51 | -8.615850e-47 |
| Msa0187230 | Msa0377900 | -0.802458 | 5.556567e-49 | -8.615850e-47 |
| Msa0187230 | Msa0379570 | 0.815879 | 7.372883e-52 | -8.615850e-47 |
| Msa0187230 | Msa0385490 | 0.814989 | 1.162925e-51 | -8.615850e-47 |
| Msa0187230 | Msa0389810 | 0.814676 | 1.364822e-51 | -8.615850e-47 |
| Msa0187230 | Msa0394340 | 0.831840 | 1.328515e-55 | -8.615850e-47 |
| Msa0187230 | Msa0404000 | 0.804562 | 2.035186e-49 | -8.615850e-47 |
| Msa0187230 | Msa0412840 | 0.837931 | 3.883154e-57 | -8.615850e-47 |
| Msa0187230 | Msa0419640 | -0.815889 | 7.334120e-52 | -8.615850e-47 |
| Msa0187230 | Msa0436190 | 0.820263 | 7.521183e-53 | -8.615850e-47 |
| Msa0187230 | Msa0442200 | 0.835530 | 1.590945e-56 | -8.615850e-47 |
| Msa0187230 | Msa0442610 | 0.800220 | 1.596425e-48 | -8.615850e-47 |
| Msa0187230 | Msa0457510 | 0.841222 | 5.414982e-58 | -8.615850e-47 |
| Msa0187230 | Msa0463550 | 0.801686 | 8.009167e-49 | -8.615850e-47 |
| Msa0187230 | Msa0468130 | 0.813582 | 2.379333e-51 | -8.615850e-47 |
| Msa0187230 | Msa0471900 | 0.812741 | 3.640078e-51 | -8.615850e-47 |
| Msa0187230 | Msa0472960 | -0.805049 | 1.610008e-49 | -8.615850e-47 |
| Msa0187230 | Msa0473830 | -0.815603 | 8.493948e-52 | -8.615850e-47 |
| Msa0187230 | Msa0477130 | -0.819400 | 1.185094e-52 | -8.615850e-47 |
| Msa0187230 | Msa0482190 | -0.808093 | 3.669026e-50 | -8.615850e-47 |
| Msa0187230 | Msa0489610 | 0.842213 | 2.965801e-58 | -8.615850e-47 |
| Msa0187230 | Msa0518070 | -0.812593 | 3.922137e-51 | -8.615850e-47 |
| Msa0187230 | Msa0521740 | 0.822976 | 1.775697e-53 | -8.615850e-47 |
| Msa0187230 | Msa0524600 | 0.807709 | 4.427171e-50 | -8.615850e-47 |
| Msa0187230 | Msa0534410 | 0.817632 | 2.982214e-52 | -8.615850e-47 |
| Msa0187230 | Msa0588240 | 0.800848 | 1.189011e-48 | -8.615850e-47 |
| Msa0187230 | Msa0590650 | 0.819356 | 1.212390e-52 | -8.615850e-47 |
| Msa0187230 | Msa0608160 | 0.800748 | 1.246172e-48 | -8.615850e-47 |
| Msa0187230 | Msa0610130 | 0.817727 | 2.837758e-52 | -8.615850e-47 |
| Msa0187230 | Msa0626220 | 0.806331 | 8.665653e-50 | -8.615850e-47 |
| Msa0187230 | Msa0630950 | 0.811056 | 8.474634e-51 | -8.615850e-47 |
| Msa0187230 | Msa0631200 | 0.803303 | 3.718335e-49 | -8.615850e-47 |
| Msa0187230 | Msa0648080 | 0.801666 | 8.084163e-49 | -8.615850e-47 |
| Msa0187230 | Msa0661710 | 0.816511 | 5.324630e-52 | -8.615850e-47 |
| Msa0187230 | Msa0669190 | 0.806526 | 7.882700e-50 | -8.615850e-47 |
| Msa0187230 | Msa0715410 | 0.800796 | 1.218036e-48 | -8.615850e-47 |
| Msa0187230 | Msa0747260 | 0.873204 | 1.762540e-67 | -8.615850e-47 |
| Msa0187230 | Msa0747270 | 0.851515 | 8.438441e-61 | -8.615850e-47 |
| Msa0187230 | Msa0749440 | 0.806197 | 9.244314e-50 | -8.615850e-47 |
| Msa0187230 | Msa0751850 | 0.804727 | 1.879813e-49 | -8.615850e-47 |
| Msa0187230 | Msa0760350 | 0.801950 | 7.070871e-49 | -8.615850e-47 |
| Msa0187230 | Msa0784380 | 0.815321 | 9.817104e-52 | -8.615850e-47 |
| Msa0187230 | Msa0793380 | 0.810092 | 1.368715e-50 | -8.615850e-47 |
| Msa0187230 | Msa0801730 | 0.803995 | 2.671214e-49 | -8.615850e-47 |
| Msa0187230 | Msa0820850 | 0.808393 | 3.166629e-50 | -8.615850e-47 |
| Msa0187230 | Msa0837780 | 0.812135 | 4.936386e-51 | -8.615850e-47 |
| Msa0187230 | Msa0860900 | -0.817386 | 3.388405e-52 | -8.615850e-47 |
| Msa0187230 | Msa0861130 | 0.805648 | 1.206255e-49 | -8.615850e-47 |
| Msa0187230 | Msa0864470 | -0.842067 | 3.242937e-58 | -8.615850e-47 |
| Msa0187230 | Msa0869120 | 0.830747 | 2.467895e-55 | -8.615850e-47 |
| Msa0187230 | Msa0879860 | 0.800051 | 1.727636e-48 | -8.615850e-47 |
| Msa0187230 | Msa0890550 | 0.805766 | 1.139046e-49 | -8.615850e-47 |
| Msa0187230 | Msa0891600 | -0.803550 | 3.303768e-49 | -8.615850e-47 |
| Msa0187230 | Msa0937150 | 0.802191 | 6.307833e-49 | -8.615850e-47 |
| Msa0187230 | Msa0937330 | 0.812413 | 4.293981e-51 | -8.615850e-47 |
| Msa0187230 | Msa0942550 | -0.824193 | 9.215354e-54 | -8.615850e-47 |
| Msa0187230 | Msa0942560 | -0.819703 | 1.010492e-52 | -8.615850e-47 |
| Msa0187230 | Msa0945120 | 0.827036 | 1.952458e-54 | -8.615850e-47 |
| Msa0187230 | Msa0982270 | 0.813048 | 3.117496e-51 | -8.615850e-47 |
| Msa0187230 | Msa0990580 | 0.812979 | 3.228362e-51 | -8.615850e-47 |
| Msa0187230 | Msa0994370 | 0.843298 | 1.526646e-58 | -8.615850e-47 |
| Msa0187230 | Msa1012830 | 0.840590 | 7.935542e-58 | -8.615850e-47 |
| Msa0187230 | Msa1029080 | -0.825385 | 4.825276e-54 | -8.615850e-47 |
| Msa0187230 | Msa1063510 | 0.808966 | 2.387921e-50 | -8.615850e-47 |
| Msa0187230 | Msa1068870 | 0.800617 | 1.324801e-48 | -8.615850e-47 |
| Msa0187230 | Msa1081790 | -0.814134 | 1.797866e-51 | -8.615850e-47 |
| Msa0187230 | Msa1091940 | 0.806289 | 8.842045e-50 | -8.615850e-47 |
| Msa0187230 | Msa1124540 | -0.812094 | 5.040645e-51 | -8.615850e-47 |
| Msa0187230 | Msa1133230 | 0.822590 | 2.183300e-53 | -8.615850e-47 |
| Msa0187230 | Msa1133250 | 0.814274 | 1.674486e-51 | -8.615850e-47 |
| Msa0187230 | Msa1143930 | -0.810373 | 1.190244e-50 | -8.615850e-47 |
| Msa0187230 | Msa1156170 | -0.821129 | 4.756779e-53 | -8.615850e-47 |
| Msa0187230 | Msa1166090 | -0.802252 | 6.128312e-49 | -8.615850e-47 |
| Msa0187230 | Msa1177780 | 0.808245 | 3.405414e-50 | -8.615850e-47 |
| Msa0187230 | Msa1183100 | -0.819831 | 9.445501e-53 | -8.615850e-47 |
| Msa0187230 | Msa1188600 | -0.816575 | 5.153083e-52 | -8.615850e-47 |
| Msa0187230 | Msa1202770 | -0.805555 | 1.261691e-49 | -8.615850e-47 |
| Msa0187230 | Msa1211140 | -0.809917 | 1.492992e-50 | -8.615850e-47 |
| Msa0187230 | Msa1217430 | -0.804237 | 2.379098e-49 | -8.615850e-47 |
| Msa0187230 | Msa1224580 | -0.802222 | 6.214598e-49 | -8.615850e-47 |
| Msa0187230 | Msa1238770 | 0.800492 | 1.405069e-48 | -8.615850e-47 |
| Msa0187230 | Msa1258380 | -0.806417 | 8.311020e-50 | -8.615850e-47 |
| Msa0187230 | Msa1263290 | -0.805858 | 1.089561e-49 | -8.615850e-47 |
| Msa0187230 | Msa1270660 | 0.836104 | 1.138027e-56 | -8.615850e-47 |
| Msa0187230 | Msa1270730 | 0.800613 | 1.327637e-48 | -8.615850e-47 |
| Msa0187230 | Msa1299290 | -0.807310 | 5.381670e-50 | -8.615850e-47 |
| Msa0187230 | Msa1302190 | -0.806489 | 8.023607e-50 | -8.615850e-47 |
| Msa0187230 | Msa1305190 | 0.803648 | 3.153118e-49 | -8.615850e-47 |
| Msa0187230 | Msa1305340 | 0.801386 | 9.226883e-49 | -8.615850e-47 |
| Msa0187230 | Msa1305350 | 0.813921 | 2.003876e-51 | -8.615850e-47 |
| Msa0187230 | Msa1306760 | 0.803663 | 3.130668e-49 | -8.615850e-47 |
| Msa0187230 | Msa1307740 | 0.811740 | 6.017691e-51 | -8.615850e-47 |
| Msa0187230 | Msa1310400 | 0.808478 | 3.036897e-50 | -8.615850e-47 |
| Msa0187230 | Msa1345220 | 0.808967 | 2.387719e-50 | -8.615850e-47 |
| Msa0187230 | Msa1348600 | 0.819010 | 1.453424e-52 | -8.615850e-47 |
| Msa0187230 | Msa1357430 | 0.811454 | 6.946824e-51 | -8.615850e-47 |
| Msa0187230 | Msa1358670 | 0.806289 | 8.841019e-50 | -8.615850e-47 |
| Msa0187230 | Msa1371940 | 0.802477 | 5.506063e-49 | -8.615850e-47 |
| Msa0187230 | Msa1376130 | 0.819139 | 1.358514e-52 | -8.615850e-47 |
| Msa0187230 | Msa1377570 | 0.824566 | 7.531378e-54 | -8.615850e-47 |
| Msa0187230 | Msa1394310 | 0.804375 | 2.226620e-49 | -8.615850e-47 |
| Msa0187230 | Msa1396400 | -0.800567 | 1.356693e-48 | -8.615850e-47 |
| Msa0187230 | Msa1397120 | 0.821333 | 4.269011e-53 | -8.615850e-47 |
| Msa0187230 | Msa1403340 | 0.840310 | 9.393412e-58 | -8.615850e-47 |
| Msa0187230 | Msa1403890 | 0.814171 | 1.764484e-51 | -8.615850e-47 |
| Msa0187230 | Msa1419640 | 0.800805 | 1.213221e-48 | -8.615850e-47 |
| Msa0187230 | Msa1438700 | 0.809051 | 2.291025e-50 | -8.615850e-47 |
| Msa0187230 | Msa1443610 | 0.830836 | 2.346734e-55 | -8.615850e-47 |
| Msa0187230 | Msa1444250 | -0.821549 | 3.806575e-53 | -8.615850e-47 |
| Msa0187230 | Msa1454950 | 0.882080 | 1.405274e-70 | -8.615850e-47 |
| Msa0187230 | Msa1462060 | 0.818117 | 2.316666e-52 | -8.615850e-47 |
| Msa0187230 | Msa1462070 | 0.856360 | 3.390388e-62 | -8.615850e-47 |
| Msa0187230 | Msa1465850 | 0.808502 | 3.000698e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187230 | MtrunA17_Chr1g0192171 | 98.214 | 168 | 3 | 0 | 1 | 168 | 1 | 168 | 2.96e-120 | 336 |
| Msa0187230 | MtrunA17_Chr1g0192201 | 97.619 | 168 | 4 | 0 | 1 | 168 | 1 | 168 | 3.38e-119 | 333 |
| Msa0187230 | MtrunA17_Chr2g0295871 | 85.119 | 168 | 24 | 1 | 1 | 168 | 1 | 167 | 1.07e-101 | 289 |
| Msa0187230 | MtrunA17_Chr6g0479151 | 80.745 | 161 | 30 | 1 | 1 | 161 | 1 | 160 | 2.91e-89 | 257 |
| Msa0187230 | MtrunA17_Chr1g0192161 | 86.047 | 129 | 18 | 0 | 19 | 147 | 9 | 137 | 2.72e-65 | 196 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0187230 | AT3G16640.1 | 77.976 | 168 | 37 | 0 | 1 | 168 | 1 | 168 | 1.80e-95 | 274 |
| Msa0187230 | AT3G05540.1 | 79.290 | 169 | 33 | 2 | 1 | 168 | 1 | 168 | 1.65e-88 | 256 |
Find 45 sgRNAs with CRISPR-Local
Find 187 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGATAGTACTCTGGTAATTT+TGG | 0.116227 | 2_1:-1912139 | Msa0187230:three_prime_UTR |
| TTGACATTGTTGACACTTTC+AGG | 0.139441 | 2_1:-1912601 | Msa0187230:CDS |
| GAGTTTACTATTCTCTAATT+AGG | 0.257485 | 2_1:-1912091 | Msa0187230:three_prime_UTR |
| AATTGTAGGTCTTTGAGTTT+TGG | 0.259902 | 2_1:+1912437 | None:intergenic |
| TGTTGACACTTTCAGGCTTC+AGG | 0.327729 | 2_1:-1912594 | Msa0187230:CDS |
| ACACATTTAGTTATCATGTT+AGG | 0.332046 | 2_1:-1912187 | Msa0187230:three_prime_UTR |
| CGCAACCATGCTTGTTTACC+AGG | 0.349778 | 2_1:-1913675 | Msa0187230:exon |
| GATGAAACACATACAATTGT+AGG | 0.370851 | 2_1:+1912423 | None:intergenic |
| CTACTTTGCCTATGGCTTGA+AGG | 0.378916 | 2_1:-1912224 | Msa0187230:CDS |
| GTTTACCAGGATCTTCTTAC+GGG | 0.390880 | 2_1:-1913662 | Msa0187230:intron |
| TGTTTACCAGGATCTTCTTA+CGG | 0.395300 | 2_1:-1913663 | Msa0187230:CDS |
| CCATTCTGAATTTCCTTGTA+GGG | 0.421805 | 2_1:+1912872 | None:intergenic |
| TCCATTCTGAATTTCCTTGT+AGG | 0.427172 | 2_1:+1912871 | None:intergenic |
| AATTGCTTCTTATCAAAAGC+TGG | 0.428621 | 2_1:+1912566 | None:intergenic |
| GAATGGAATGTTGTGGGAAG+TGG | 0.443613 | 2_1:-1912855 | Msa0187230:CDS |
| CCTTGTGTTTGCTTACTACA+AGG | 0.455642 | 2_1:-1912272 | Msa0187230:CDS |
| TATTTGCAGTGGGTTGTTCA+AGG | 0.483236 | 2_1:-1912710 | Msa0187230:intron |
| CTCTGACTCATTCCCCTACA+AGG | 0.486361 | 2_1:-1912885 | Msa0187230:CDS |
| AATAAGAGAGAAGCAAAAGA+AGG | 0.496831 | 2_1:+1913710 | None:intergenic |
| GGAGCAGTGGATGTGAATAT+TGG | 0.501116 | 2_1:-1912689 | Msa0187230:CDS |
| GGTGCTAACCCTTCTGCTGA+GGG | 0.509671 | 2_1:-1912668 | Msa0187230:CDS |
| CTTGATTTCCTTCAAGCCAT+AGG | 0.517168 | 2_1:+1912216 | None:intergenic |
| TTTACTATTCTCTAATTAGG+AGG | 0.521787 | 2_1:-1912088 | Msa0187230:three_prime_UTR |
| ATTCTTAATCGATAGTACTC+TGG | 0.532748 | 2_1:-1912148 | Msa0187230:three_prime_UTR |
| AATTCAGAATGGAATGTTGT+GGG | 0.534489 | 2_1:-1912861 | Msa0187230:CDS |
| TCGTCACCACCCTCAGCAGA+AGG | 0.538139 | 2_1:+1912659 | None:intergenic |
| GTGTTTGCTTACTACAAGGA+TGG | 0.538874 | 2_1:-1912268 | Msa0187230:CDS |
| CCCTACAAGGAAATTCAGAA+TGG | 0.541188 | 2_1:-1912872 | Msa0187230:CDS |
| CATTCTGAATTTCCTTGTAG+GGG | 0.549656 | 2_1:+1912873 | None:intergenic |
| TGGTGCTAACCCTTCTGCTG+AGG | 0.553542 | 2_1:-1912669 | Msa0187230:CDS |
| GTTTACCCGTAAGAAGATCC+TGG | 0.562606 | 2_1:+1913657 | None:intergenic |
| GGGGAGAGCATGCATGATGA+TGG | 0.565967 | 2_1:-1912298 | Msa0187230:CDS |
| AAATTCAGAATGGAATGTTG+TGG | 0.574500 | 2_1:-1912862 | Msa0187230:CDS |
| GTTGTGGGAAGTGGAAGGAA+AGG | 0.585239 | 2_1:-1912846 | Msa0187230:intron |
| GTAGAGAAAAGTTGAATCAG+TGG | 0.590080 | 2_1:+1912243 | None:intergenic |
| TTCTGCTGAGGGTGGTGACG+AGG | 0.592413 | 2_1:-1912657 | Msa0187230:CDS |
| CTGGTAAACAAGCATGGTTG+CGG | 0.598178 | 2_1:+1913676 | None:intergenic |
| AAGATCCTGGTAAACAAGCA+TGG | 0.602746 | 2_1:+1913670 | None:intergenic |
| GCTAACCCTTCTGCTGAGGG+TGG | 0.615863 | 2_1:-1912665 | Msa0187230:CDS |
| CGTCACCACCCTCAGCAGAA+GGG | 0.628440 | 2_1:+1912660 | None:intergenic |
| CCTTGTAGTAAGCAAACACA+AGG | 0.635355 | 2_1:+1912272 | None:intergenic |
| GTGGGTTGTTCAAGGAGCAG+TGG | 0.636439 | 2_1:-1912702 | Msa0187230:CDS |
| GAGGGTGGTGACGAGGATGA+CGG | 0.661706 | 2_1:-1912650 | Msa0187230:CDS |
| GGAATGTTGTGGGAAGTGGA+AGG | 0.687071 | 2_1:-1912851 | Msa0187230:CDS |
| ATATTGTTCTCAGAGCAACA+TGG | 0.711223 | 2_1:-1912043 | Msa0187230:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAATTTAATAGAATTTGT+TGG | - | chr2_1:1912576-1912595 | Msa0187230:CDS | 10.0% |
| !! | TTTATTTATGATCATATATT+TGG | + | chr2_1:1912995-1913014 | None:intergenic | 10.0% |
| !!! | TTTAATTTAATAGAATTTGT+TGG | - | chr2_1:1912576-1912595 | Msa0187230:CDS | 10.0% |
| !! | TTTATTTATGATCATATATT+TGG | + | chr2_1:1912995-1913014 | None:intergenic | 10.0% |
| !!! | TTATATATTAACCTTTTGTA+AGG | - | chr2_1:1912363-1912382 | Msa0187230:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGACACA+AGG | - | chr2_1:1912414-1912433 | Msa0187230:intron | 15.0% |
| !! | AAAACAAAAATTCATTCAAA+TGG | - | chr2_1:1912793-1912812 | Msa0187230:intron | 15.0% |
| !!! | TTATATATTAACCTTTTGTA+AGG | - | chr2_1:1912363-1912382 | Msa0187230:intron | 15.0% |
| !!! | TTTTTTTTTTTTTTGACACA+AGG | - | chr2_1:1912414-1912433 | Msa0187230:intron | 15.0% |
| !! | AAAACAAAAATTCATTCAAA+TGG | - | chr2_1:1912793-1912812 | Msa0187230:intron | 15.0% |
| !! | AAAGTAAAAGAAACCTAATT+GGG | + | chr2_1:1912157-1912176 | None:intergenic | 20.0% |
| !! | AAAAGTAAAAGAAACCTAAT+TGG | + | chr2_1:1912158-1912177 | None:intergenic | 20.0% |
| !! | TTATCATTCATCGTAATATT+TGG | + | chr2_1:1912236-1912255 | None:intergenic | 20.0% |
| !!! | TTTTTCATAAACTTCACTTT+TGG | - | chr2_1:1912311-1912330 | Msa0187230:intron | 20.0% |
| !!! | ACAAGGTTAAAATACTTTTT+TGG | - | chr2_1:1912431-1912450 | Msa0187230:intron | 20.0% |
| !! | GATAATAATGAAAAACCTAA+AGG | + | chr2_1:1912550-1912569 | None:intergenic | 20.0% |
| !! | TAATCTTAAATATTAGTAGC+AGG | + | chr2_1:1912743-1912762 | None:intergenic | 20.0% |
| !!! | ATTATCTTTCATCTCTTTTT+TGG | - | chr2_1:1913354-1913373 | Msa0187230:intron | 20.0% |
| !!! | ATTAAGTTTTCTCTTTTTTG+TGG | - | chr2_1:1913381-1913400 | Msa0187230:intron | 20.0% |
| !! | AAAGTAAAAGAAACCTAATT+GGG | + | chr2_1:1912157-1912176 | None:intergenic | 20.0% |
| !! | AAAAGTAAAAGAAACCTAAT+TGG | + | chr2_1:1912158-1912177 | None:intergenic | 20.0% |
| !! | TTATCATTCATCGTAATATT+TGG | + | chr2_1:1912236-1912255 | None:intergenic | 20.0% |
| !!! | TTTTTCATAAACTTCACTTT+TGG | - | chr2_1:1912311-1912330 | Msa0187230:intron | 20.0% |
| !!! | ACAAGGTTAAAATACTTTTT+TGG | - | chr2_1:1912431-1912450 | Msa0187230:intron | 20.0% |
| !! | GATAATAATGAAAAACCTAA+AGG | + | chr2_1:1912550-1912569 | None:intergenic | 20.0% |
| !! | TAATCTTAAATATTAGTAGC+AGG | + | chr2_1:1912743-1912762 | None:intergenic | 20.0% |
| !!! | ATTATCTTTCATCTCTTTTT+TGG | - | chr2_1:1913354-1913373 | Msa0187230:intron | 20.0% |
| !!! | ATTAAGTTTTCTCTTTTTTG+TGG | - | chr2_1:1913381-1913400 | Msa0187230:intron | 20.0% |
| !!! | TTTTCTCCATTGTTTTTCAT+AGG | - | chr2_1:1912174-1912193 | Msa0187230:three_prime_UTR | 25.0% |
| ! | CAAAATCCTATGAAAAACAA+TGG | + | chr2_1:1912183-1912202 | None:intergenic | 25.0% |
| ! | AAATTCATTCACTAAACACA+GGG | + | chr2_1:1912268-1912287 | None:intergenic | 25.0% |
| ! | AATCTTAACAACCTTACAAA+AGG | + | chr2_1:1912377-1912396 | None:intergenic | 25.0% |
| ! | TTGGAAAACCTTAAATTTCT+TGG | - | chr2_1:1912450-1912469 | Msa0187230:CDS | 25.0% |
| ! | TGGAAAACCTTAAATTTCTT+GGG | - | chr2_1:1912451-1912470 | Msa0187230:CDS | 25.0% |
| ! | ACTATTATAGATCAAACTTG+TGG | - | chr2_1:1912485-1912504 | Msa0187230:CDS | 25.0% |
| ! | AAATATTACTTAGCAGTTTG+TGG | + | chr2_1:1912654-1912673 | None:intergenic | 25.0% |
| ! | AAAATCCACAATCAAGTATT+AGG | + | chr2_1:1912703-1912722 | None:intergenic | 25.0% |
| ! | ACACATTTAGTTATCATGTT+AGG | - | chr2_1:1913567-1913586 | Msa0187230:intron | 25.0% |
| ! | GAGTTTACTATTCTCTAATT+AGG | - | chr2_1:1913663-1913682 | Msa0187230:CDS | 25.0% |
| ! | TTTACTATTCTCTAATTAGG+AGG | - | chr2_1:1913666-1913685 | Msa0187230:CDS | 25.0% |
| !!! | TTTTCTCCATTGTTTTTCAT+AGG | - | chr2_1:1912174-1912193 | Msa0187230:three_prime_UTR | 25.0% |
| ! | CAAAATCCTATGAAAAACAA+TGG | + | chr2_1:1912183-1912202 | None:intergenic | 25.0% |
| ! | AAATTCATTCACTAAACACA+GGG | + | chr2_1:1912268-1912287 | None:intergenic | 25.0% |
| ! | AATCTTAACAACCTTACAAA+AGG | + | chr2_1:1912377-1912396 | None:intergenic | 25.0% |
| ! | TTGGAAAACCTTAAATTTCT+TGG | - | chr2_1:1912450-1912469 | Msa0187230:CDS | 25.0% |
| ! | TGGAAAACCTTAAATTTCTT+GGG | - | chr2_1:1912451-1912470 | Msa0187230:CDS | 25.0% |
| ! | ACTATTATAGATCAAACTTG+TGG | - | chr2_1:1912485-1912504 | Msa0187230:CDS | 25.0% |
| ! | AAATATTACTTAGCAGTTTG+TGG | + | chr2_1:1912654-1912673 | None:intergenic | 25.0% |
| ! | AAAATCCACAATCAAGTATT+AGG | + | chr2_1:1912703-1912722 | None:intergenic | 25.0% |
| ! | ACACATTTAGTTATCATGTT+AGG | - | chr2_1:1913567-1913586 | Msa0187230:intron | 25.0% |
| ! | GAGTTTACTATTCTCTAATT+AGG | - | chr2_1:1913663-1913682 | Msa0187230:CDS | 25.0% |
| ! | TTTACTATTCTCTAATTAGG+AGG | - | chr2_1:1913666-1913685 | Msa0187230:CDS | 25.0% |
| AATAAGAGAGAAGCAAAAGA+AGG | + | chr2_1:1912047-1912066 | None:intergenic | 30.0% | |
| ACAAAAAACTCAAAGATGCA+AGG | + | chr2_1:1912122-1912141 | None:intergenic | 30.0% | |
| ! | TTTTACTTTACCACCCAATT+AGG | - | chr2_1:1912141-1912160 | Msa0187230:three_prime_UTR | 30.0% |
| GAAATTCATTCACTAAACAC+AGG | + | chr2_1:1912269-1912288 | None:intergenic | 30.0% | |
| GATCTATAATAGTGTGTGTT+TGG | + | chr2_1:1912478-1912497 | None:intergenic | 30.0% | |
| !! | AGTTTTATGTTTGTGTTCTG+TGG | - | chr2_1:1912519-1912538 | Msa0187230:CDS | 30.0% |
| ! | CTTTGTTGATGAATTTGTCT+AGG | - | chr2_1:1912834-1912853 | Msa0187230:intron | 30.0% |
| AAATTCAGAATGGAATGTTG+TGG | - | chr2_1:1912892-1912911 | Msa0187230:CDS | 30.0% | |
| AATTCAGAATGGAATGTTGT+GGG | - | chr2_1:1912893-1912912 | Msa0187230:CDS | 30.0% | |
| CACATCACACAATAAACTTT+AGG | + | chr2_1:1913022-1913041 | None:intergenic | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr2_1:1913191-1913210 | None:intergenic | 30.0% | |
| !! | ATTGTAGGTCTTTGAGTTTT+GGG | + | chr2_1:1913319-1913338 | None:intergenic | 30.0% |
| !! | AATTGTAGGTCTTTGAGTTT+TGG | + | chr2_1:1913320-1913339 | None:intergenic | 30.0% |
| GATGAAACACATACAATTGT+AGG | + | chr2_1:1913334-1913353 | None:intergenic | 30.0% | |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | chr2_1:1913436-1913455 | Msa0187230:intron | 30.0% |
| ATTCTTAATCGATAGTACTC+TGG | - | chr2_1:1913606-1913625 | Msa0187230:intron | 30.0% | |
| AATAAGAGAGAAGCAAAAGA+AGG | + | chr2_1:1912047-1912066 | None:intergenic | 30.0% | |
| ACAAAAAACTCAAAGATGCA+AGG | + | chr2_1:1912122-1912141 | None:intergenic | 30.0% | |
| ! | TTTTACTTTACCACCCAATT+AGG | - | chr2_1:1912141-1912160 | Msa0187230:three_prime_UTR | 30.0% |
| GAAATTCATTCACTAAACAC+AGG | + | chr2_1:1912269-1912288 | None:intergenic | 30.0% | |
| GATCTATAATAGTGTGTGTT+TGG | + | chr2_1:1912478-1912497 | None:intergenic | 30.0% | |
| !! | AGTTTTATGTTTGTGTTCTG+TGG | - | chr2_1:1912519-1912538 | Msa0187230:CDS | 30.0% |
| ! | CTTTGTTGATGAATTTGTCT+AGG | - | chr2_1:1912834-1912853 | Msa0187230:intron | 30.0% |
| AAATTCAGAATGGAATGTTG+TGG | - | chr2_1:1912892-1912911 | Msa0187230:CDS | 30.0% | |
| AATTCAGAATGGAATGTTGT+GGG | - | chr2_1:1912893-1912912 | Msa0187230:CDS | 30.0% | |
| CACATCACACAATAAACTTT+AGG | + | chr2_1:1913022-1913041 | None:intergenic | 30.0% | |
| AATTGCTTCTTATCAAAAGC+TGG | + | chr2_1:1913191-1913210 | None:intergenic | 30.0% | |
| !! | ATTGTAGGTCTTTGAGTTTT+GGG | + | chr2_1:1913319-1913338 | None:intergenic | 30.0% |
| !! | AATTGTAGGTCTTTGAGTTT+TGG | + | chr2_1:1913320-1913339 | None:intergenic | 30.0% |
| GATGAAACACATACAATTGT+AGG | + | chr2_1:1913334-1913353 | None:intergenic | 30.0% | |
| !!! | ATCAATGTTGCAGTTTTGTT+GGG | - | chr2_1:1913436-1913455 | Msa0187230:intron | 30.0% |
| ATTCTTAATCGATAGTACTC+TGG | - | chr2_1:1913606-1913625 | Msa0187230:intron | 30.0% | |
| TGTTTACCAGGATCTTCTTA+CGG | - | chr2_1:1912091-1912110 | Msa0187230:three_prime_UTR | 35.0% | |
| GTAAAAGAAACCTAATTGGG+TGG | + | chr2_1:1912154-1912173 | None:intergenic | 35.0% | |
| GTTTGGTCCCAAGAAATTTA+AGG | + | chr2_1:1912461-1912480 | None:intergenic | 35.0% | |
| TGTTCTGTGGTTTAACCTTT+AGG | - | chr2_1:1912532-1912551 | Msa0187230:CDS | 35.0% | |
| GTTAGGCTAATCGTGTTTAA+AGG | + | chr2_1:1912681-1912700 | None:intergenic | 35.0% | |
| CCACAATCAAGTATTAGGTT+AGG | + | chr2_1:1912698-1912717 | None:intergenic | 35.0% | |
| CCTAACCTAATACTTGATTG+TGG | - | chr2_1:1912695-1912714 | Msa0187230:CDS | 35.0% | |
| CATTCTGAATTTCCTTGTAG+GGG | + | chr2_1:1912884-1912903 | None:intergenic | 35.0% | |
| CCATTCTGAATTTCCTTGTA+GGG | + | chr2_1:1912885-1912904 | None:intergenic | 35.0% | |
| TCCATTCTGAATTTCCTTGT+AGG | + | chr2_1:1912886-1912905 | None:intergenic | 35.0% | |
| TGTGATGTGATTATTTGCAG+TGG | - | chr2_1:1913033-1913052 | Msa0187230:intron | 35.0% | |
| GTGATGTGATTATTTGCAGT+GGG | - | chr2_1:1913034-1913053 | Msa0187230:intron | 35.0% | |
| TTGACATTGTTGACACTTTC+AGG | - | chr2_1:1913153-1913172 | Msa0187230:intron | 35.0% | |
| !! | TTGAACAACTCTTGCTTTTC+TGG | + | chr2_1:1913263-1913282 | None:intergenic | 35.0% |
| !! | CATCAATGTTGCAGTTTTGT+TGG | - | chr2_1:1913435-1913454 | Msa0187230:intron | 35.0% |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | chr2_1:1913437-1913456 | Msa0187230:intron | 35.0% |
| GTAGAGAAAAGTTGAATCAG+TGG | + | chr2_1:1913514-1913533 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | chr2_1:1913522-1913541 | Msa0187230:intron | 35.0% |
| ! | CGATAGTACTCTGGTAATTT+TGG | - | chr2_1:1913615-1913634 | Msa0187230:intron | 35.0% |
| ATATTGTTCTCAGAGCAACA+TGG | - | chr2_1:1913711-1913730 | Msa0187230:five_prime_UTR | 35.0% | |
| AAGGTGAAAGAGTTAACTAG+CGG | + | chr2_1:1912028-1912047 | None:intergenic | 35.0% | |
| TGTTTACCAGGATCTTCTTA+CGG | - | chr2_1:1912091-1912110 | Msa0187230:three_prime_UTR | 35.0% | |
| GTAAAAGAAACCTAATTGGG+TGG | + | chr2_1:1912154-1912173 | None:intergenic | 35.0% | |
| GTTTGGTCCCAAGAAATTTA+AGG | + | chr2_1:1912461-1912480 | None:intergenic | 35.0% | |
| TGTTCTGTGGTTTAACCTTT+AGG | - | chr2_1:1912532-1912551 | Msa0187230:CDS | 35.0% | |
| GTTAGGCTAATCGTGTTTAA+AGG | + | chr2_1:1912681-1912700 | None:intergenic | 35.0% | |
| CCACAATCAAGTATTAGGTT+AGG | + | chr2_1:1912698-1912717 | None:intergenic | 35.0% | |
| CCTAACCTAATACTTGATTG+TGG | - | chr2_1:1912695-1912714 | Msa0187230:CDS | 35.0% | |
| CATTCTGAATTTCCTTGTAG+GGG | + | chr2_1:1912884-1912903 | None:intergenic | 35.0% | |
| CCATTCTGAATTTCCTTGTA+GGG | + | chr2_1:1912885-1912904 | None:intergenic | 35.0% | |
| TCCATTCTGAATTTCCTTGT+AGG | + | chr2_1:1912886-1912905 | None:intergenic | 35.0% | |
| TGTGATGTGATTATTTGCAG+TGG | - | chr2_1:1913033-1913052 | Msa0187230:intron | 35.0% | |
| GTGATGTGATTATTTGCAGT+GGG | - | chr2_1:1913034-1913053 | Msa0187230:intron | 35.0% | |
| TTGACATTGTTGACACTTTC+AGG | - | chr2_1:1913153-1913172 | Msa0187230:intron | 35.0% | |
| !! | TTGAACAACTCTTGCTTTTC+TGG | + | chr2_1:1913263-1913282 | None:intergenic | 35.0% |
| !! | CATCAATGTTGCAGTTTTGT+TGG | - | chr2_1:1913435-1913454 | Msa0187230:intron | 35.0% |
| !!! | TCAATGTTGCAGTTTTGTTG+GGG | - | chr2_1:1913437-1913456 | Msa0187230:intron | 35.0% |
| GTAGAGAAAAGTTGAATCAG+TGG | + | chr2_1:1913514-1913533 | None:intergenic | 35.0% | |
| ! | ACTTTTCTCTACTTTGCCTA+TGG | - | chr2_1:1913522-1913541 | Msa0187230:intron | 35.0% |
| ! | CGATAGTACTCTGGTAATTT+TGG | - | chr2_1:1913615-1913634 | Msa0187230:intron | 35.0% |
| ATATTGTTCTCAGAGCAACA+TGG | - | chr2_1:1913711-1913730 | Msa0187230:five_prime_UTR | 35.0% | |
| AAGATCCTGGTAAACAAGCA+TGG | + | chr2_1:1912087-1912106 | None:intergenic | 40.0% | |
| GTTTACCAGGATCTTCTTAC+GGG | - | chr2_1:1912092-1912111 | Msa0187230:three_prime_UTR | 40.0% | |
| AGTTGTTGTGTTTGTGACAG+AGG | - | chr2_1:1912610-1912629 | Msa0187230:CDS | 40.0% | |
| CCCTACAAGGAAATTCAGAA+TGG | - | chr2_1:1912882-1912901 | Msa0187230:CDS | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr2_1:1913044-1913063 | Msa0187230:intron | 40.0% |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr2_1:1913485-1913504 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr2_1:1913482-1913501 | Msa0187230:intron | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr2_1:1913486-1913505 | Msa0187230:intron | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | chr2_1:1913541-1913560 | None:intergenic | 40.0% | |
| AAGATCCTGGTAAACAAGCA+TGG | + | chr2_1:1912087-1912106 | None:intergenic | 40.0% | |
| GTTTACCAGGATCTTCTTAC+GGG | - | chr2_1:1912092-1912111 | Msa0187230:three_prime_UTR | 40.0% | |
| AGTTGTTGTGTTTGTGACAG+AGG | - | chr2_1:1912610-1912629 | Msa0187230:CDS | 40.0% | |
| CCCTACAAGGAAATTCAGAA+TGG | - | chr2_1:1912882-1912901 | Msa0187230:CDS | 40.0% | |
| !! | TATTTGCAGTGGGTTGTTCA+AGG | - | chr2_1:1913044-1913063 | Msa0187230:intron | 40.0% |
| CCTTGTAGTAAGCAAACACA+AGG | + | chr2_1:1913485-1913504 | None:intergenic | 40.0% | |
| CCTTGTGTTTGCTTACTACA+AGG | - | chr2_1:1913482-1913501 | Msa0187230:intron | 40.0% | |
| GTGTTTGCTTACTACAAGGA+TGG | - | chr2_1:1913486-1913505 | Msa0187230:intron | 40.0% | |
| CTTGATTTCCTTCAAGCCAT+AGG | + | chr2_1:1913541-1913560 | None:intergenic | 40.0% | |
| CTGGTAAACAAGCATGGTTG+CGG | + | chr2_1:1912081-1912100 | None:intergenic | 45.0% | |
| GTTTACCCGTAAGAAGATCC+TGG | + | chr2_1:1912100-1912119 | None:intergenic | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | chr2_1:1912899-1912918 | Msa0187230:CDS | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr2_1:1913065-1913084 | Msa0187230:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr2_1:1913160-1913179 | Msa0187230:intron | 45.0% | |
| !!! | GGTCTTTGAGTTTTGGGAGA+AGG | + | chr2_1:1913313-1913332 | None:intergenic | 45.0% |
| CTACTTTGCCTATGGCTTGA+AGG | - | chr2_1:1913530-1913549 | Msa0187230:intron | 45.0% | |
| CTGGTAAACAAGCATGGTTG+CGG | + | chr2_1:1912081-1912100 | None:intergenic | 45.0% | |
| GTTTACCCGTAAGAAGATCC+TGG | + | chr2_1:1912100-1912119 | None:intergenic | 45.0% | |
| GAATGGAATGTTGTGGGAAG+TGG | - | chr2_1:1912899-1912918 | Msa0187230:CDS | 45.0% | |
| GGAGCAGTGGATGTGAATAT+TGG | - | chr2_1:1913065-1913084 | Msa0187230:intron | 45.0% | |
| TGTTGACACTTTCAGGCTTC+AGG | - | chr2_1:1913160-1913179 | Msa0187230:intron | 45.0% | |
| !!! | GGTCTTTGAGTTTTGGGAGA+AGG | + | chr2_1:1913313-1913332 | None:intergenic | 45.0% |
| CTACTTTGCCTATGGCTTGA+AGG | - | chr2_1:1913530-1913549 | Msa0187230:intron | 45.0% | |
| !!! | ATTCTATTAAATTAAAATTT+TGG | + | chr2_1:1912572-1912591 | None:intergenic | 5.0% |
| !!! | ATTCTATTAAATTAAAATTT+TGG | + | chr2_1:1912572-1912591 | None:intergenic | 5.0% |
| CGCAACCATGCTTGTTTACC+AGG | - | chr2_1:1912079-1912098 | Msa0187230:three_prime_UTR | 50.0% | |
| CTCTGACTCATTCCCCTACA+AGG | - | chr2_1:1912869-1912888 | Msa0187230:CDS | 50.0% | |
| GGAATGTTGTGGGAAGTGGA+AGG | - | chr2_1:1912903-1912922 | Msa0187230:intron | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | chr2_1:1912908-1912927 | Msa0187230:intron | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | chr2_1:1912913-1912932 | Msa0187230:intron | 50.0% | |
| CGCAACCATGCTTGTTTACC+AGG | - | chr2_1:1912079-1912098 | Msa0187230:three_prime_UTR | 50.0% | |
| CTCTGACTCATTCCCCTACA+AGG | - | chr2_1:1912869-1912888 | Msa0187230:CDS | 50.0% | |
| GGAATGTTGTGGGAAGTGGA+AGG | - | chr2_1:1912903-1912922 | Msa0187230:intron | 50.0% | |
| GTTGTGGGAAGTGGAAGGAA+AGG | - | chr2_1:1912908-1912927 | Msa0187230:intron | 50.0% | |
| GGGAAGTGGAAGGAAAGGTT+AGG | - | chr2_1:1912913-1912932 | Msa0187230:intron | 50.0% | |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr2_1:1913052-1913071 | Msa0187230:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCTG+AGG | - | chr2_1:1913085-1913104 | Msa0187230:intron | 55.0% |
| GGTGCTAACCCTTCTGCTGA+GGG | - | chr2_1:1913086-1913105 | Msa0187230:intron | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr2_1:1913456-1913475 | Msa0187230:intron | 55.0% |
| ! | GTGGGTTGTTCAAGGAGCAG+TGG | - | chr2_1:1913052-1913071 | Msa0187230:intron | 55.0% |
| ! | TGGTGCTAACCCTTCTGCTG+AGG | - | chr2_1:1913085-1913104 | Msa0187230:intron | 55.0% |
| GGTGCTAACCCTTCTGCTGA+GGG | - | chr2_1:1913086-1913105 | Msa0187230:intron | 55.0% | |
| ! | GGGGAGAGCATGCATGATGA+TGG | - | chr2_1:1913456-1913475 | Msa0187230:intron | 55.0% |
| GCTAACCCTTCTGCTGAGGG+TGG | - | chr2_1:1913089-1913108 | Msa0187230:intron | 60.0% | |
| CGTCACCACCCTCAGCAGAA+GGG | + | chr2_1:1913097-1913116 | None:intergenic | 60.0% | |
| TCGTCACCACCCTCAGCAGA+AGG | + | chr2_1:1913098-1913117 | None:intergenic | 60.0% | |
| ! | TTCTGCTGAGGGTGGTGACG+AGG | - | chr2_1:1913097-1913116 | Msa0187230:intron | 60.0% |
| ! | GAGGGTGGTGACGAGGATGA+CGG | - | chr2_1:1913104-1913123 | Msa0187230:intron | 60.0% |
| GCTAACCCTTCTGCTGAGGG+TGG | - | chr2_1:1913089-1913108 | Msa0187230:intron | 60.0% | |
| CGTCACCACCCTCAGCAGAA+GGG | + | chr2_1:1913097-1913116 | None:intergenic | 60.0% | |
| TCGTCACCACCCTCAGCAGA+AGG | + | chr2_1:1913098-1913117 | None:intergenic | 60.0% | |
| ! | TTCTGCTGAGGGTGGTGACG+AGG | - | chr2_1:1913097-1913116 | Msa0187230:intron | 60.0% |
| ! | GAGGGTGGTGACGAGGATGA+CGG | - | chr2_1:1913104-1913123 | Msa0187230:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 1912026 | 1913750 | 1912026 | ID=Msa0187230;Name=Msa0187230 |
| chr2_1 | mRNA | 1912026 | 1913750 | 1912026 | ID=Msa0187230-mRNA-1;Parent=Msa0187230;Name=Msa0187230-mRNA-1;_AED=0.30;_eAED=0.30;_QI=60|1|1|1|1|1|4|184|168 |
| chr2_1 | exon | 1912026 | 1912327 | 1912026 | ID=Msa0187230-mRNA-1:exon:921;Parent=Msa0187230-mRNA-1 |
| chr2_1 | exon | 1912437 | 1912723 | 1912437 | ID=Msa0187230-mRNA-1:exon:920;Parent=Msa0187230-mRNA-1 |
| chr2_1 | exon | 1912847 | 1912920 | 1912847 | ID=Msa0187230-mRNA-1:exon:919;Parent=Msa0187230-mRNA-1 |
| chr2_1 | exon | 1913663 | 1913750 | 1913663 | ID=Msa0187230-mRNA-1:exon:918;Parent=Msa0187230-mRNA-1 |
| chr2_1 | five_prime_UTR | 1913691 | 1913750 | 1913691 | ID=Msa0187230-mRNA-1:five_prime_utr;Parent=Msa0187230-mRNA-1 |
| chr2_1 | CDS | 1913663 | 1913690 | 1913663 | ID=Msa0187230-mRNA-1:cds;Parent=Msa0187230-mRNA-1 |
| chr2_1 | CDS | 1912847 | 1912920 | 1912847 | ID=Msa0187230-mRNA-1:cds;Parent=Msa0187230-mRNA-1 |
| chr2_1 | CDS | 1912437 | 1912723 | 1912437 | ID=Msa0187230-mRNA-1:cds;Parent=Msa0187230-mRNA-1 |
| chr2_1 | CDS | 1912210 | 1912327 | 1912210 | ID=Msa0187230-mRNA-1:cds;Parent=Msa0187230-mRNA-1 |
| chr2_1 | three_prime_UTR | 1912026 | 1912209 | 1912026 | ID=Msa0187230-mRNA-1:three_prime_utr;Parent=Msa0187230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
