AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1255410


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255410 MtrunA17_Chr8g0373661 88.046 527 33 5 1 522 1 502 0.0 700
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1255410 AT1G53645.1 62.304 191 70 2 334 522 333 523 5.83e-79 257

Find 184 sgRNAs with CRISPR-Local

Find 472 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCACCTTCAACAAGCTTTC+CGG 0.227322 8_2:-54064166 Msa1255410:CDS
CTCCAATGGTTCCTCTCATT+TGG 0.246963 8_2:+54064457 None:intergenic
TTCTTTGCAGTTACCCTATC+TGG 0.248729 8_2:+54062504 None:intergenic
TTTGGTCTGGCTAGATTGTT+TGG 0.251745 8_2:+54064622 None:intergenic
GGTTCTTTCTCATCAATATC+TGG 0.265566 8_2:+54063026 None:intergenic
CCCACCATGTTTAAACTATT+AGG 0.280618 8_2:+54058195 None:intergenic
TCAAACTCCACCGCATATTC+TGG 0.299644 8_2:+54063053 None:intergenic
AGGGTTAGGGTTAGGGTTAC+CGG 0.302448 8_2:+54064278 None:intergenic
CCGTGCTGTCATCTCTCTTC+AGG 0.310721 8_2:-54062406 Msa1255410:intron
GGCCGCGGTCGTGGTGGTTC+TGG 0.311716 8_2:-54064336 Msa1255410:CDS
TCAGGGCTAGGGTTAGGGTT+AGG 0.316434 8_2:+54064270 None:intergenic
TGTTGCCTGGAGGTGGGAGG+GGG 0.335772 8_2:-54063792 Msa1255410:CDS
GAAAGAACCGATTGCACTTC+GGG 0.337469 8_2:-54063012 Msa1255410:CDS
TTGACATCAGGGCTAGGGTT+AGG 0.341235 8_2:+54064264 None:intergenic
AAACCTGAAGAAGTGGAAAA+TGG 0.348213 8_2:+54064384 None:intergenic
CGCCCGCTTTCAGTTTGGTC+TGG 0.350459 8_2:+54064609 None:intergenic
CAGGGCTAGGGTTAGGGTTA+GGG 0.362193 8_2:+54064271 None:intergenic
TCCAATGGTTCCTCTCATTT+GGG 0.365379 8_2:+54064458 None:intergenic
AGGTGTTGCCTGGAGGTGGG+AGG 0.366035 8_2:-54063795 Msa1255410:CDS
ACGGAAGATGGTGCACTTGT+AGG 0.368520 8_2:+54062444 None:intergenic
AAACTAGCTTATCCATGAAT+TGG 0.369301 8_2:+54058244 None:intergenic
CCACCTCCAGGCAACACCTT+TGG 0.380640 8_2:+54063799 None:intergenic
CTGTTCATCGGCTGCCTCCT+AGG 0.388316 8_2:+54063661 None:intergenic
GTGTTGCCTGGAGGTGGGAG+GGG 0.389066 8_2:-54063793 Msa1255410:CDS
CGTGGCGGTGGCCGCGGTCG+TGG 0.394338 8_2:-54064345 Msa1255410:CDS
CTAGTAAAAGACGGTTTCTT+CGG 0.394364 8_2:+54063901 None:intergenic
GGTGATGGAAGGGGAAGGTA+TGG 0.398845 8_2:-54063526 Msa1255410:CDS
AGGAGGAAGAGGTGATGGAA+GGG 0.399167 8_2:-54063536 Msa1255410:CDS
GAAAATTTAGCGAAGAAGCT+TGG 0.406039 8_2:-54063427 Msa1255410:CDS
GTAGAGCCAATAGATTTATC+TGG 0.406442 8_2:-54063859 Msa1255410:CDS
CGACAAGAAATGCCAATTCA+TGG 0.407306 8_2:-54058256 Msa1255410:CDS
CTATTACCAGATAAATCTAT+TGG 0.410011 8_2:+54063853 None:intergenic
TTGGTCTGGCTAGATTGTTT+GGG 0.412968 8_2:+54064623 None:intergenic
TAGCGTTTGTCTTGTGGCAT+TGG 0.414494 8_2:+54064410 None:intergenic
CCAAAGGTGTTGCCTGGAGG+TGG 0.416183 8_2:-54063799 Msa1255410:CDS
TCAGGTTTCGGCGGTGGTGA+TGG 0.417047 8_2:-54064369 Msa1255410:CDS
ACTGGTCGGGGACGCGGTCG+TGG 0.419690 8_2:-54064105 Msa1255410:CDS
AATGCTGATGGGCTATATCT+TGG 0.422789 8_2:-54063466 Msa1255410:CDS
CTCAAGCTCCGGTAGTGAAC+AGG 0.423650 8_2:-54063732 Msa1255410:CDS
GGTTTAGAATCATTGACATC+AGG 0.426611 8_2:+54064252 None:intergenic
AGAGGAAGAGGAAGAGGAAG+AGG 0.426997 8_2:-54063607 Msa1255410:CDS
AAAATTTAGCGAAGAAGCTT+GGG 0.430060 8_2:-54063426 Msa1255410:CDS
ATCGGTGAATCTGTTGCATC+AGG 0.432286 8_2:+54064231 None:intergenic
TTGTCTTGTGGCATTGGAAA+TGG 0.435407 8_2:+54064416 None:intergenic
AGTGGAAGAGGAAGAGGAAG+AGG 0.436235 8_2:-54063613 Msa1255410:CDS
TCATCAACCTGGTACTGGTC+GGG 0.436303 8_2:-54064118 Msa1255410:CDS
GATAAATCTATTGGCTCTAC+TGG 0.437931 8_2:+54063862 None:intergenic
TGTTGCGCCCGCTTTCAGTT+TGG 0.438820 8_2:+54064604 None:intergenic
GGTGGTGATGGCCGTGGCGG+TGG 0.438898 8_2:-54064357 Msa1255410:CDS
CGGGGACGCGGTCGTGGTCG+AGG 0.439164 8_2:-54064099 Msa1255410:CDS
AATTGAAGAGTTAATGCAAC+GGG 0.439485 8_2:-54062565 Msa1255410:CDS
GGTAGAGGCCGTGGTGGTAG+AGG 0.439678 8_2:-54063556 Msa1255410:CDS
GGAGGAAGAGGTGATGGAAG+GGG 0.440280 8_2:-54063535 Msa1255410:CDS
GAAAATGATTCTGTACCAAC+TGG 0.440558 8_2:-54064051 Msa1255410:CDS
GATGAAAGTGGAAGAGGAAG+AGG 0.443310 8_2:-54063619 Msa1255410:CDS
TGACATCAGGGCTAGGGTTA+GGG 0.444256 8_2:+54064265 None:intergenic
GGTAGAGGAGGAAGAGGTGA+TGG 0.446354 8_2:-54063541 Msa1255410:CDS
ATTCCACCTGGTGCTGGTCG+TGG 0.446401 8_2:-54064210 Msa1255410:CDS
ACTTCTTCAGGTTTCGGCGG+TGG 0.450076 8_2:-54064375 Msa1255410:CDS
GAGGAGGAAGAGGTGATGGA+AGG 0.452318 8_2:-54063537 Msa1255410:CDS
CGACCAGCACCAGGTGGAAT+CGG 0.452625 8_2:+54064213 None:intergenic
GAAGCTTGGGCCTGAGATGA+TGG 0.454944 8_2:-54063413 Msa1255410:CDS
GTGAACTCTTTCACGGAAGA+TGG 0.455569 8_2:+54062432 None:intergenic
CCTGGTACTGGTCGGGGACG+CGG 0.460146 8_2:-54064111 Msa1255410:CDS
CCTGGTGCTGGTCGTGGCCA+TGG 0.461613 8_2:-54064204 Msa1255410:CDS
GATGGCCGTGGCGGTGGCCG+CGG 0.469580 8_2:-54064351 Msa1255410:CDS
TTCTTGTCGAATCCCCAGCC+TGG 0.471173 8_2:+54058270 None:intergenic
TATATGATGCAGAGCAATCC+AGG 0.472747 8_2:-54058288 Msa1255410:intron
GCTCGTGGCCGAGGAGGTAG+AGG 0.475229 8_2:-54063571 Msa1255410:CDS
ACTGGTCGTGGACGCGGTCG+AGG 0.477132 8_2:-54064033 Msa1255410:CDS
TCTTGAGCTGCTTCTTCCAA+CGG 0.477397 8_2:+54063760 None:intergenic
GCTGGTCGTGGCCATGGTCG+TGG 0.477563 8_2:-54064198 Msa1255410:CDS
GAATCATTGACATCAGGGCT+AGG 0.477871 8_2:+54064258 None:intergenic
TCTATTCATCAACCTGGTAC+TGG 0.481130 8_2:-54064123 Msa1255410:CDS
TCGGATTACTGAAGCATATG+AGG 0.482732 8_2:-54063389 Msa1255410:CDS
TGATGCAGAGCAATCCAGGC+TGG 0.483494 8_2:-54058284 Msa1255410:intron
GGTGTTGCCTGGAGGTGGGA+GGG 0.486583 8_2:-54063794 Msa1255410:CDS
GAGGATAATGTTTCTCAGAC+AGG 0.491809 8_2:-54063943 Msa1255410:CDS
CCGCGTCCCCGACCAGTACC+AGG 0.492475 8_2:+54064111 None:intergenic
AAGATATAGCCCATCAGCAT+TGG 0.498060 8_2:+54063468 None:intergenic
ACGGTTAGTGAACTCTTTCA+CGG 0.502532 8_2:+54062425 None:intergenic
CAAAGGTGTTGCCTGGAGGT+GGG 0.504812 8_2:-54063798 Msa1255410:CDS
GGCCGAGGAGGTAGAGGCCG+TGG 0.509132 8_2:-54063565 Msa1255410:CDS
GATGTGTATGCTCGTGGCCG+AGG 0.509602 8_2:-54063580 Msa1255410:CDS
AGAGATGATGGTGATGAAAG+TGG 0.511063 8_2:-54063631 Msa1255410:CDS
TTCGGCGGTGGTGATGGCCG+TGG 0.513048 8_2:-54064363 Msa1255410:CDS
TGACTTGTCCACAATACAAT+GGG 0.514833 8_2:+54058155 None:intergenic
TGAGAGGAACCATTGGAGTA+AGG 0.516509 8_2:-54064452 Msa1255410:CDS
GTAATCCGATCCATCATCTC+AGG 0.517395 8_2:+54063403 None:intergenic
GTCGTGGCCATGGTCGTGGT+GGG 0.517490 8_2:-54064194 Msa1255410:CDS
AGATGATAGAACAAGTCATC+AGG 0.518001 8_2:-54063503 Msa1255410:CDS
CGTGGTGGTAGAGGAGGAAG+AGG 0.520322 8_2:-54063547 Msa1255410:CDS
CACGACCGCGGCCACCGCCA+CGG 0.521808 8_2:+54064346 None:intergenic
TCACCGATTCCACCTGGTGC+TGG 0.521829 8_2:-54064216 Msa1255410:CDS
CTGCATCTGATAATGTTCCT+AGG 0.522503 8_2:-54063678 Msa1255410:CDS
GATGGTGATGAAAGTGGAAG+AGG 0.523245 8_2:-54063625 Msa1255410:CDS
AACAGATTTGTGAGAGATGA+TGG 0.524122 8_2:-54063643 Msa1255410:CDS
GTACCAACTGGTCGTGGACG+CGG 0.528998 8_2:-54064039 Msa1255410:CDS
CCTAATAGTTTAAACATGGT+GGG 0.529435 8_2:-54058195 Msa1255410:three_prime_UTR
ACCGCCGAAACCTGAAGAAG+TGG 0.530487 8_2:+54064377 None:intergenic
ATCACTACAGCGGACCAGAT+AGG 0.531367 8_2:-54062518 Msa1255410:CDS
AGAAAGAACCGATTGCACTT+CGG 0.532289 8_2:-54063013 Msa1255410:CDS
AGTGCATCCCGAAGTGCAAT+CGG 0.533272 8_2:+54063005 None:intergenic
AGAGGCCGTGGTGGTAGAGG+AGG 0.535761 8_2:-54063553 Msa1255410:CDS
GAAGAGGTGATGGAAGGGGA+AGG 0.535784 8_2:-54063531 Msa1255410:CDS
TGGAACTAGCGTTTGTCTTG+TGG 0.535954 8_2:+54064404 None:intergenic
GATGCAGAGCAATCCAGGCT+GGG 0.536072 8_2:-54058283 Msa1255410:intron
GTATCAGCGTCGCGAGGTAG+CGG 0.536080 8_2:-54064558 Msa1255410:five_prime_UTR
TGAACAGGCATATCCGCGTT+CGG 0.536805 8_2:-54063717 Msa1255410:CDS
ACCTAATAGTTTAAACATGG+TGG 0.537866 8_2:-54058196 Msa1255410:three_prime_UTR
GATTCTGTACCAACTGGTCG+TGG 0.542945 8_2:-54064045 Msa1255410:CDS
TCAAGAAGCTCCTCAAGCTC+CGG 0.543537 8_2:-54063743 Msa1255410:CDS
TATCGCCGACACGAAGTGAT+CGG 0.546563 8_2:+54064522 None:intergenic
TTATCAGATGCAGCATCAGC+CGG 0.546697 8_2:+54063688 None:intergenic
TCCCAAATGAGAGGAACCAT+TGG 0.549673 8_2:-54064459 Msa1255410:exon
AATCATTGACATCAGGGCTA+GGG 0.550140 8_2:+54064259 None:intergenic
GGTCGTGGCCATGGTCGTGG+TGG 0.550623 8_2:-54064195 Msa1255410:CDS
TCACTACAGCGGACCAGATA+GGG 0.550825 8_2:-54062517 Msa1255410:CDS
GGCGGTGGCCGCGGTCGTGG+TGG 0.553330 8_2:-54064342 Msa1255410:CDS
TTCATCAACCTGGTACTGGT+CGG 0.554220 8_2:-54064119 Msa1255410:CDS
CCATGGCCACGACCAGCACC+AGG 0.557760 8_2:+54064204 None:intergenic
ACTGTGCCAAAGGTGTTGCC+TGG 0.559635 8_2:-54063805 Msa1255410:CDS
GTTTAGAATCATTGACATCA+GGG 0.559648 8_2:+54064253 None:intergenic
ATAGCGCGTTCCAATGCTGA+TGG 0.559942 8_2:-54063478 Msa1255410:CDS
GACATAAACGACGAAAACGC+CGG 0.561836 8_2:+54064147 None:intergenic
CGGATATGCCTGTTCACTAC+CGG 0.563579 8_2:+54063724 None:intergenic
CACCACGGCCTCTACCTCCT+CGG 0.565248 8_2:+54063563 None:intergenic
AACGCCGGAAAGCTTGTTGA+AGG 0.569562 8_2:+54064162 None:intergenic
GTAAAAGACGGTTTCTTCGG+AGG 0.572454 8_2:+54063904 None:intergenic
GCCGGAAAGCTTGTTGAAGG+TGG 0.572764 8_2:+54064165 None:intergenic
GATTCGAAGTCAAGAAGAGT+GGG 0.572829 8_2:-54062946 Msa1255410:CDS
TCTTGTGGCATTGGAAATGG+TGG 0.573141 8_2:+54064419 None:intergenic
AGCCAGACCAAACTGAAAGC+GGG 0.573621 8_2:-54064611 Msa1255410:five_prime_UTR
TATCCGCGTTCGGCAAACTC+CGG 0.575011 8_2:-54063707 Msa1255410:CDS
CATCAACCTGGTACTGGTCG+GGG 0.575996 8_2:-54064117 Msa1255410:CDS
CAGCCGGAGTTTGCCGAACG+CGG 0.577581 8_2:+54063704 None:intergenic
GAACTGTCCCACCACGACCA+TGG 0.577645 8_2:+54064187 None:intergenic
TCTCTCACAAATCTGTTCAT+CGG 0.578507 8_2:+54063649 None:intergenic
GTTTAATCTTCCCAAATGAG+AGG 0.579706 8_2:-54064468 Msa1255410:exon
ATGTCTTCTATTCATCAACC+TGG 0.585758 8_2:-54064129 Msa1255410:CDS
GGATTCGAAGTCAAGAAGAG+TGG 0.586087 8_2:-54062947 Msa1255410:CDS
ACCTGTCTTCATCAAAAGAG+AGG 0.588860 8_2:-54063962 Msa1255410:CDS
ACCGTTGCAAGATGAATATG+TGG 0.589115 8_2:-54063341 Msa1255410:CDS
TCCACATATTCATCTTGCAA+CGG 0.589778 8_2:+54063340 None:intergenic
CTGTTCACTACCGGAGCTTG+AGG 0.592767 8_2:+54063733 None:intergenic
ATGACTTGTCCACAATACAA+TGG 0.595769 8_2:+54058154 None:intergenic
TATTCATCTTGCAACGGTGA+GGG 0.599373 8_2:+54063346 None:intergenic
ATGCAGAGCAATCCAGGCTG+GGG 0.601555 8_2:-54058282 Msa1255410:intron
ATACAATGCCCATTGTATTG+TGG 0.601786 8_2:-54058163 Msa1255410:three_prime_UTR
TCAGCGTCGCGAGGTAGCGG+CGG 0.605501 8_2:-54064555 Msa1255410:five_prime_UTR
ACAGATTCACCGATTCCACC+TGG 0.606567 8_2:-54064222 Msa1255410:CDS
TCCACTTCTTCAGGTTTCGG+CGG 0.608890 8_2:-54064378 Msa1255410:CDS
TCCTCAAATCTAGTAAAAGA+CGG 0.609975 8_2:+54063892 None:intergenic
TGCTTGTGATGCGGAGAGAG+TGG 0.612416 8_2:+54064495 None:intergenic
TAGCCAGACCAAACTGAAAG+CGG 0.612979 8_2:-54064612 Msa1255410:five_prime_UTR
TAGCGCGTTCCAATGCTGAT+GGG 0.615947 8_2:-54063477 Msa1255410:CDS
ATATTCATCTTGCAACGGTG+AGG 0.616062 8_2:+54063345 None:intergenic
AGATGAATATGTGGAAGCAA+TGG 0.616565 8_2:-54063332 Msa1255410:CDS
GGCACAGTGACATTCAACTT+CGG 0.619021 8_2:-54064315 Msa1255410:CDS
TTGGGCCTGAGATGATGGAT+CGG 0.619513 8_2:-54063408 Msa1255410:CDS
TATCTTGGAGATAATGCAGA+TGG 0.621855 8_2:-54063451 Msa1255410:CDS
GGCGGTGGTGATGGCCGTGG+CGG 0.623720 8_2:-54064360 Msa1255410:CDS
TGCCAGAACCACCACGACCG+CGG 0.624237 8_2:+54064334 None:intergenic
GGGTTAGGGTTAGGGTTACC+GGG 0.624624 8_2:+54064279 None:intergenic
TGAATTTGAGCCAGAATATG+CGG 0.624630 8_2:-54063063 Msa1255410:CDS
CGAGGAGGTAGAGGCCGTGG+TGG 0.626950 8_2:-54063562 Msa1255410:CDS
GGAAGAGATGTGTATGCTCG+TGG 0.636849 8_2:-54063586 Msa1255410:CDS
TAAACAAAATGCTTGTGATG+CGG 0.642463 8_2:+54064486 None:intergenic
ATTTGTAATGACTGTGCCAA+AGG 0.653633 8_2:-54063815 Msa1255410:CDS
GTGCCAAAGGTGTTGCCTGG+AGG 0.655445 8_2:-54063802 Msa1255410:CDS
CGACCGCGTCCACGACCAGT+TGG 0.658092 8_2:+54064036 None:intergenic
AATTTCCGATCACTTCGTGT+CGG 0.664226 8_2:-54064527 Msa1255410:five_prime_UTR
GTGTATGCTCGTGGCCGAGG+AGG 0.667737 8_2:-54063577 Msa1255410:CDS
ATTTGAGCCAGAATATGCGG+TGG 0.671575 8_2:-54063060 Msa1255410:CDS
TAATTGAAGAGTTAATGCAA+CGG 0.672734 8_2:-54062566 Msa1255410:CDS
CTCTTCCTCCTCTACCACCA+CGG 0.676685 8_2:+54063548 None:intergenic
TGGCCACGACCAGCACCAGG+TGG 0.681683 8_2:+54064207 None:intergenic
TCGAAGTCAAGAAGAGTGGG+AGG 0.683559 8_2:-54062943 Msa1255410:intron
ATAACCTAATAGTTTAAACA+TGG 0.692264 8_2:-54058199 Msa1255410:exon
AAACACGTATCAGCGTCGCG+AGG 0.693287 8_2:-54064564 Msa1255410:five_prime_UTR
CATCTGATAATGTTCCTAGG+AGG 0.714229 8_2:-54063675 Msa1255410:CDS
AAGATTGTTGATCACTACAG+CGG 0.722275 8_2:-54062528 Msa1255410:CDS
TTGTGATGCGGAGAGAGTGG+TGG 0.724351 8_2:+54064498 None:intergenic
CCTGAAGAGAGATGACAGCA+CGG 0.753810 8_2:+54062406 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTATGTAATATTTCTTA+TGG - chr8_2:54061304-54061323 Msa1255410:intron 10.0%
!!! TTTTATGTAATATTTCTTAT+GGG - chr8_2:54061305-54061324 Msa1255410:intron 10.0%
!! TAAGAAAAATGTATAAATAA+AGG - chr8_2:54062861-54062880 Msa1255410:intron 10.0%
!! AAGAAAAATGTATAAATAAA+GGG - chr8_2:54062862-54062881 Msa1255410:intron 10.0%
!! TATTTAGTATTATATTGTAT+TGG - chr8_2:54062926-54062945 Msa1255410:intron 10.0%
!! ATTTAGTATTATATTGTATT+GGG - chr8_2:54062927-54062946 Msa1255410:intron 10.0%
!! TAATTTACTAAAATAAATCA+TGG - chr8_2:54063550-54063569 Msa1255410:CDS 10.0%
!! TTATACTTTGATATTAGTAT+AGG - chr8_2:54060336-54060355 Msa1255410:intron 15.0%
!! AATGAAAGAATATAAGTTAT+TGG - chr8_2:54060707-54060726 Msa1255410:intron 15.0%
!!! TTTATTCATCTTAACATTTT+TGG + chr8_2:54061274-54061293 None:intergenic 15.0%
!! TTTATGTAATATTTCTTATG+GGG - chr8_2:54061306-54061325 Msa1255410:intron 15.0%
!! AAAAAACCATATGAAATATT+AGG + chr8_2:54061643-54061662 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+AGG + chr8_2:54062673-54062692 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - chr8_2:54062481-54062500 Msa1255410:CDS 15.0%
!! AATGCTATTAAAATTAAGTA+AGG - chr8_2:54062673-54062692 Msa1255410:intron 15.0%
!!! ATTGATTACTTTTCAATTTA+GGG + chr8_2:54062747-54062766 None:intergenic 15.0%
!!! AATTGATTACTTTTCAATTT+AGG + chr8_2:54062748-54062767 None:intergenic 15.0%
!! AGAAAAATGTATAAATAAAG+GGG - chr8_2:54062863-54062882 Msa1255410:intron 15.0%
!! AATAATAAATGCAATTTGTA+TGG - chr8_2:54063852-54063871 Msa1255410:CDS 15.0%
!!! ATTTTGAGAAAAAAAAATCA+AGG - chr8_2:54063902-54063921 Msa1255410:CDS 15.0%
!! AAATTATAGGAATAATTGTA+TGG + chr8_2:54063954-54063973 None:intergenic 15.0%
!! TTAAGGAATCATTAAATTAT+AGG + chr8_2:54063967-54063986 None:intergenic 15.0%
!! ACCTAAAACATAAAAAAAAA+AGG - chr8_2:54064000-54064019 Msa1255410:CDS 15.0%
!!! TCCTTTTTTTTTTATGTTTT+AGG + chr8_2:54064004-54064023 None:intergenic 15.0%
!! AAACATAAAAAAAAAAGGAA+TGG - chr8_2:54064005-54064024 Msa1255410:CDS 15.0%
!! CAACATTTAATTGAAATAAA+AGG + chr8_2:54064237-54064256 None:intergenic 15.0%
!!! CTTTTATTTCAATTAAATGT+TGG - chr8_2:54064235-54064254 Msa1255410:CDS 15.0%
!! CAATTTAGTATATTTATGTT+TGG - chr8_2:54064268-54064287 Msa1255410:CDS 15.0%
!! AACAAAAAGATAGAGATATA+TGG + chr8_2:54059307-54059326 None:intergenic 20.0%
!!! ATATATCTCTATCTTTTTGT+TGG - chr8_2:54059306-54059325 Msa1255410:intron 20.0%
!!! ATCCATTTTTCATAAAGAAT+GGG - chr8_2:54059399-54059418 Msa1255410:intron 20.0%
!! AGTTATGCCATTATATTATT+GGG + chr8_2:54059712-54059731 None:intergenic 20.0%
!! AAGTTATGCCATTATATTAT+TGG + chr8_2:54059713-54059732 None:intergenic 20.0%
!! GTTAACTAAAACAAAGTTAT+TGG + chr8_2:54059831-54059850 None:intergenic 20.0%
!!! TTTGGAATAGTTGTATTTTA+TGG - chr8_2:54059897-54059916 Msa1255410:intron 20.0%
!!! TTGGAATAGTTGTATTTTAT+GGG - chr8_2:54059898-54059917 Msa1255410:intron 20.0%
!!! TCAACAATCTTTTTCAATAA+AGG + chr8_2:54060048-54060067 None:intergenic 20.0%
!!! GAAATAAAATGCTTTTACTT+AGG - chr8_2:54060220-54060239 Msa1255410:intron 20.0%
!! TTAGTATAGGTTCTATTTAT+TGG - chr8_2:54060349-54060368 Msa1255410:intron 20.0%
!! AAGAACAACAAATATTTATC+TGG + chr8_2:54060448-54060467 None:intergenic 20.0%
!!! AAATATTTGTTGTTCTTTCT+AGG - chr8_2:54060451-54060470 Msa1255410:intron 20.0%
!! TGAAAGAAAACAAAAAGTAA+AGG - chr8_2:54060499-54060518 Msa1255410:intron 20.0%
!!! ATATTTAACTTTGTTGTTAG+TGG - chr8_2:54060770-54060789 Msa1255410:intron 20.0%
!! AAATCAAAATCAGTCTTTAT+TGG + chr8_2:54061184-54061203 None:intergenic 20.0%
!!! TCAAACTAAATTTTAACCAA+GGG + chr8_2:54061212-54061231 None:intergenic 20.0%
!!! ATCAAACTAAATTTTAACCA+AGG + chr8_2:54061213-54061232 None:intergenic 20.0%
!! TACATATTATACAGTTAGTT+AGG + chr8_2:54061509-54061528 None:intergenic 20.0%
!! AGTTAGCAAATATAAAAAAG+AGG + chr8_2:54061935-54061954 None:intergenic 20.0%
!! AACTAGAGAAAAGAAATTAT+AGG + chr8_2:54061996-54062015 None:intergenic 20.0%
!!! TCTTTTCTCTAGTTTTAATA+TGG - chr8_2:54062002-54062021 Msa1255410:intron 20.0%
!!! AAAAAAGCACTATATTTCTA+AGG - chr8_2:54062055-54062074 Msa1255410:intron 20.0%
!! TTCAAAAATTTAAGAGTTCA+AGG + chr8_2:54062350-54062369 None:intergenic 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr8_2:54062610-54062629 Msa1255410:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr8_2:54062611-54062630 Msa1255410:intron 20.0%
!! AAAGTGGAATATATTGTATT+GGG - chr8_2:54062886-54062905 Msa1255410:intron 20.0%
!! AGTTGTATTGAAAATTGAAA+TGG - chr8_2:54062959-54062978 Msa1255410:CDS 20.0%
!! GTTGTATTGAAAATTGAAAT+GGG - chr8_2:54062960-54062979 Msa1255410:CDS 20.0%
!!! GACACTTTTTTTTAGAAAAT+GGG - chr8_2:54062996-54063015 Msa1255410:CDS 20.0%
!!! ACAAGTGAGTTTTTAAATTT+AGG + chr8_2:54063210-54063229 None:intergenic 20.0%
!!! CTAATCATTTAGTTTAATTC+AGG + chr8_2:54063602-54063621 None:intergenic 20.0%
!! AACTAAATGATTAGATTTAG+TGG - chr8_2:54063608-54063627 Msa1255410:CDS 20.0%
!!! TTCTAAAACATCAAAAGAAA+AGG + chr8_2:54063732-54063751 None:intergenic 20.0%
!!! TTCTAAAACATCAAAAGTTT+TGG + chr8_2:54063768-54063787 None:intergenic 20.0%
!! ATAAAAAAAAAAGGAATGGA+GGG - chr8_2:54064009-54064028 Msa1255410:CDS 20.0%
!! ATAACCTAATAGTTTAAACA+TGG - chr8_2:54064386-54064405 Msa1255410:CDS 20.0%
!!! TCCATCTTATTTTAGATTTT+TGG - chr8_2:54064617-54064636 Msa1255410:five_prime_UTR 20.0%
!! ACAGAATCATTTTCAAATTG+AGG + chr8_2:54058528-54058547 None:intergenic 25.0%
!! ACAGAATCATTTTCAAATTG+AGG + chr8_2:54058528-54058547 None:intergenic 25.0%
! CTATTACCAGATAAATCTAT+TGG + chr8_2:54058735-54058754 None:intergenic 25.0%
! TTGTTGGAAAATGATTCTAT+TGG - chr8_2:54059322-54059341 Msa1255410:intron 25.0%
!!! CATCCATTTTTCATAAAGAA+TGG - chr8_2:54059398-54059417 Msa1255410:intron 25.0%
! TTCCCATTCTTTATGAAAAA+TGG + chr8_2:54059404-54059423 None:intergenic 25.0%
!!! CATTTTTGATGACATATGAA+GGG - chr8_2:54059617-54059636 Msa1255410:intron 25.0%
! ATTACAGCCCAATAATATAA+TGG - chr8_2:54059702-54059721 Msa1255410:intron 25.0%
! TATCTTCACTAACAATCTTA+TGG - chr8_2:54059797-54059816 Msa1255410:intron 25.0%
! AGGATATCAAGTTAGAAAAT+AGG + chr8_2:54059990-54060009 None:intergenic 25.0%
! TAATTGAAGAGTTAATGCAA+CGG - chr8_2:54060019-54060038 Msa1255410:intron 25.0%
! TGTTAAAATAAAATCCCCTT+TGG - chr8_2:54060303-54060322 Msa1255410:intron 25.0%
! TATAGGTTCTATTTATTGGA+TGG - chr8_2:54060353-54060372 Msa1255410:intron 25.0%
!! CTAGGAATTTAGAATCTAAA+TGG - chr8_2:54060469-54060488 Msa1255410:intron 25.0%
! AGAAAACAAAAAGTAAAGGA+AGG - chr8_2:54060503-54060522 Msa1255410:intron 25.0%
! AGATTCTTGAAATTAACACA+AGG - chr8_2:54060569-54060588 Msa1255410:intron 25.0%
! ATTGGAGTTTACATATGTTA+AGG - chr8_2:54060725-54060744 Msa1255410:intron 25.0%
! GAAACATTATAGGATAGAAT+AGG - chr8_2:54060798-54060817 Msa1255410:intron 25.0%
!! TAAGTAGTAGTAGAATTTTC+AGG - chr8_2:54060891-54060910 Msa1255410:intron 25.0%
! ATCAGTCTTTATTGGATATA+AGG + chr8_2:54061176-54061195 None:intergenic 25.0%
! ATCGTTATTGAAAATCTCAA+CGG - chr8_2:54061355-54061374 Msa1255410:intron 25.0%
!! TACTTGTTACTAACAAGTAT+TGG - chr8_2:54061555-54061574 Msa1255410:intron 25.0%
!! TCCTTTGTTAATTCTTTTGT+AGG - chr8_2:54061605-54061624 Msa1255410:intron 25.0%
! AGTGTTCCTAATATTTCATA+TGG - chr8_2:54061634-54061653 Msa1255410:intron 25.0%
! TTTGAATTCTATCTATGTTG+CGG - chr8_2:54061903-54061922 Msa1255410:intron 25.0%
! AGCAAATATAAAAAAGAGGT+GGG + chr8_2:54061931-54061950 None:intergenic 25.0%
! TAGCAAATATAAAAAAGAGG+TGG + chr8_2:54061932-54061951 None:intergenic 25.0%
!! TTTTTACGAAACTAAGTTAG+AGG - chr8_2:54062127-54062146 Msa1255410:intron 25.0%
! TTCAATTTATTCTCATCTCT+TGG + chr8_2:54062186-54062205 None:intergenic 25.0%
! AAGAGATGAGAATAAATTGA+AGG - chr8_2:54062185-54062204 Msa1255410:intron 25.0%
! AGAGATGAGAATAAATTGAA+GGG - chr8_2:54062186-54062205 Msa1255410:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr8_2:54062321-54062340 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr8_2:54062322-54062341 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - chr8_2:54062644-54062663 Msa1255410:intron 25.0%
! AAGTAAGGACTAAACTTATA+AGG - chr8_2:54062688-54062707 Msa1255410:intron 25.0%
!!! TTATAAGGTCGCTATTTTAT+AGG - chr8_2:54062703-54062722 Msa1255410:intron 25.0%
!!! TATAAGGTCGCTATTTTATA+GGG - chr8_2:54062704-54062723 Msa1255410:intron 25.0%
! GAAAGTGGAATATATTGTAT+TGG - chr8_2:54062885-54062904 Msa1255410:intron 25.0%
!!! GGACACTTTTTTTTAGAAAA+TGG - chr8_2:54062995-54063014 Msa1255410:CDS 25.0%
! ATACCAGATAATCAGAATTA+AGG + chr8_2:54063456-54063475 None:intergenic 25.0%
! ATCAAAAGAAAAGGAATAGA+GGG + chr8_2:54063723-54063742 None:intergenic 25.0%
!!! TTTTTCAACAAGGGTAAAAT+TGG + chr8_2:54063808-54063827 None:intergenic 25.0%
!! GAAAAACACACTTTGAAAAT+TGG - chr8_2:54063822-54063841 Msa1255410:CDS 25.0%
! ATGGTGAGTTTCAATAATTA+AGG - chr8_2:54063871-54063890 Msa1255410:CDS 25.0%
! AAAAAATCAAGGAGTAAGTA+AGG - chr8_2:54063913-54063932 Msa1255410:CDS 25.0%
! AAAAATCAAGGAGTAAGTAA+GGG - chr8_2:54063914-54063933 Msa1255410:CDS 25.0%
! CATAAAAAAAAAAGGAATGG+AGG - chr8_2:54064008-54064027 Msa1255410:CDS 25.0%
!! GCCAAAAATCTAAAATAAGA+TGG + chr8_2:54064621-54064640 None:intergenic 25.0%
TAAACAAAATGCTTGTGATG+CGG + chr8_2:54058102-54058121 None:intergenic 30.0%
! GTTTAGAATCATTGACATCA+GGG + chr8_2:54058335-54058354 None:intergenic 30.0%
! GAATCATTTTCAAATTGAGG+TGG + chr8_2:54058525-54058544 None:intergenic 30.0%
! GAATCATTTTCAAATTGAGG+TGG + chr8_2:54058525-54058544 None:intergenic 30.0%
!!! TTGATGAAGACAGGTTTTTT+AGG + chr8_2:54058618-54058637 None:intergenic 30.0%
TCCTCAAATCTAGTAAAAGA+CGG + chr8_2:54058696-54058715 None:intergenic 30.0%
AAAATTTAGCGAAGAAGCTT+GGG - chr8_2:54059159-54059178 Msa1255410:intron 30.0%
! TGGAAAATGATTCTAAGAAG+TGG - chr8_2:54059342-54059361 Msa1255410:intron 30.0%
! TGATTCTAAGAAGTGGAAAT+AGG - chr8_2:54059349-54059368 Msa1255410:intron 30.0%
TCTTTATGAAAAATGGATGC+AGG + chr8_2:54059397-54059416 None:intergenic 30.0%
! ATAAAGAATGGGAACGTTTT+AGG - chr8_2:54059410-54059429 Msa1255410:intron 30.0%
CCTTCATATGTCATCAAAAA+TGG + chr8_2:54059619-54059638 None:intergenic 30.0%
!! CCATTTTTGATGACATATGA+AGG - chr8_2:54059616-54059635 Msa1255410:intron 30.0%
! TATAATGGCATAACTTGCAA+TGG - chr8_2:54059717-54059736 Msa1255410:intron 30.0%
! CTGTATTGCTGCATTTATTT+TGG - chr8_2:54059879-54059898 Msa1255410:intron 30.0%
ATCTATATGTGCAAGTATGT+TGG - chr8_2:54059959-54059978 Msa1255410:intron 30.0%
TTAACTCTTCAATTACTTCC+TGG + chr8_2:54060014-54060033 None:intergenic 30.0%
AATTGAAGAGTTAATGCAAC+GGG - chr8_2:54060020-54060039 Msa1255410:intron 30.0%
TATAACAGAACTATGCCAAA+GGG + chr8_2:54060321-54060340 None:intergenic 30.0%
ATTTATTGGATGGTTGTAGA+AGG - chr8_2:54060363-54060382 Msa1255410:intron 30.0%
TATCCTATTCTATCAAAAGC+AGG + chr8_2:54060753-54060772 None:intergenic 30.0%
! TAGAATAGGTTGAGTTATTG+TGG - chr8_2:54060812-54060831 Msa1255410:intron 30.0%
!! AAATGGACATTTTCAAGAAC+TGG - chr8_2:54060954-54060973 Msa1255410:intron 30.0%
TGAGTATTAATTGCATTGTG+AGG - chr8_2:54060990-54061009 Msa1255410:intron 30.0%
AGACAAATCTTGCAATTGAA+AGG - chr8_2:54061064-54061083 Msa1255410:intron 30.0%
GACAAATCTTGCAATTGAAA+GGG - chr8_2:54061065-54061084 Msa1255410:intron 30.0%
TAGTAAGAAAGTTGTCTAAG+AGG - chr8_2:54061134-54061153 Msa1255410:intron 30.0%
GGATATAAGGAAGGAATAAA+GGG + chr8_2:54061163-54061182 None:intergenic 30.0%
TGGATATAAGGAAGGAATAA+AGG + chr8_2:54061164-54061183 None:intergenic 30.0%
GTCTTTATTGGATATAAGGA+AGG + chr8_2:54061172-54061191 None:intergenic 30.0%
TCGTTATTGAAAATCTCAAC+GGG - chr8_2:54061356-54061375 Msa1255410:intron 30.0%
GCCTACAAAAGAATTAACAA+AGG + chr8_2:54061609-54061628 None:intergenic 30.0%
TTGTCTTTGCCATCAAAAAA+TGG - chr8_2:54061664-54061683 Msa1255410:intron 30.0%
!!! TTTTTTAGTGAACCATGAAC+AGG + chr8_2:54061698-54061717 None:intergenic 30.0%
!! AAACTTTTAAGAGTGCAGTT+GGG - chr8_2:54061819-54061838 Msa1255410:intron 30.0%
!! TACAAGGTCGCTATTTTATA+GGG + chr8_2:54062229-54062248 None:intergenic 30.0%
!! TTACAAGGTCGCTATTTTAT+AGG + chr8_2:54062230-54062249 None:intergenic 30.0%
AAGTAAGGACTAAACTTACA+AGG + chr8_2:54062245-54062264 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - chr8_2:54062384-54062403 Msa1255410:intron 30.0%
!!! TTTGCGATAATTTTTTGCAG+AGG - chr8_2:54062519-54062538 Msa1255410:CDS 30.0%
CAGTGCAGAAAAACAAAATT+AGG - chr8_2:54062643-54062662 Msa1255410:intron 30.0%
TGTATAAATAAAGGGGAAAG+TGG - chr8_2:54062870-54062889 Msa1255410:intron 30.0%
! TTGAAATGGGTCAGTTATTT+TGG - chr8_2:54062973-54062992 Msa1255410:CDS 30.0%
!! TGAAATGGGTCAGTTATTTT+GGG - chr8_2:54062974-54062993 Msa1255410:CDS 30.0%
CAACTGGAATAATTAAGCTA+TGG + chr8_2:54063081-54063100 None:intergenic 30.0%
ATGTTAAAGTTCAGTGAACT+TGG + chr8_2:54063344-54063363 None:intergenic 30.0%
ACTTTAACATCAGTTTCGTT+TGG - chr8_2:54063354-54063373 Msa1255410:CDS 30.0%
CTTTAACATCAGTTTCGTTT+GGG - chr8_2:54063355-54063374 Msa1255410:CDS 30.0%
AAGTTCAGTTTAGTACAGTT+TGG - chr8_2:54063402-54063421 Msa1255410:CDS 30.0%
TTTCTTCTGCTGTATAATTG+TGG + chr8_2:54063576-54063595 None:intergenic 30.0%
CATCAAAAGAAAAGGAATAG+AGG + chr8_2:54063724-54063743 None:intergenic 30.0%
!! CAAAGTGTGTTTTTCAACAA+GGG + chr8_2:54063817-54063836 None:intergenic 30.0%
!! TCAAAGTGTGTTTTTCAACA+AGG + chr8_2:54063818-54063837 None:intergenic 30.0%
AGGTGATTGCACAAATATTA+AGG + chr8_2:54063984-54064003 None:intergenic 30.0%
!! TGTAGAGATTTTGTTTGTCT+TGG - chr8_2:54064063-54064082 Msa1255410:CDS 30.0%
! AAACTAGCTTATCCATGAAT+TGG + chr8_2:54064344-54064363 None:intergenic 30.0%
ACCTAATAGTTTAAACATGG+TGG - chr8_2:54064389-54064408 Msa1255410:CDS 30.0%
CCTAATAGTTTAAACATGGT+GGG - chr8_2:54064390-54064409 Msa1255410:CDS 30.0%
!! TGATAGCTATTTTGTTGCAT+CGG - chr8_2:54064530-54064549 Msa1255410:five_prime_UTR 30.0%
GTTTAATCTTCCCAAATGAG+AGG - chr8_2:54058117-54058136 Msa1255410:three_prime_UTR 35.0%
!!! ATTTTGAAGCCTTACTCCAA+TGG + chr8_2:54058145-54058164 None:intergenic 35.0%
AAACCTGAAGAAGTGGAAAA+TGG + chr8_2:54058204-54058223 None:intergenic 35.0%
!! TTTTCCACTTCTTCAGGTTT+CGG - chr8_2:54058204-54058223 Msa1255410:exon 35.0%
! GGTTTAGAATCATTGACATC+AGG + chr8_2:54058336-54058355 None:intergenic 35.0%
ATGTCTTCTATTCATCAACC+TGG - chr8_2:54058456-54058475 Msa1255410:intron 35.0%
! TTTTCAAATTGAGGTGGCAA+TGG + chr8_2:54058519-54058538 None:intergenic 35.0%
GAAAATGATTCTGTACCAAC+TGG - chr8_2:54058534-54058553 Msa1255410:intron 35.0%
! TTTTCAAATTGAGGTGGCAA+TGG + chr8_2:54058519-54058538 None:intergenic 35.0%
CTAGTAAAAGACGGTTTCTT+CGG + chr8_2:54058687-54058706 None:intergenic 35.0%
! ACCGTCTTTTACTAGATTTG+AGG - chr8_2:54058692-54058711 Msa1255410:intron 35.0%
!! GATAAATCTATTGGCTCTAC+TGG + chr8_2:54058726-54058745 None:intergenic 35.0%
GTAGAGCCAATAGATTTATC+TGG - chr8_2:54058726-54058745 Msa1255410:intron 35.0%
ATTTGTAATGACTGTGCCAA+AGG - chr8_2:54058770-54058789 Msa1255410:intron 35.0%
TCTCTCACAAATCTGTTCAT+CGG + chr8_2:54058939-54058958 None:intergenic 35.0%
AACAGATTTGTGAGAGATGA+TGG - chr8_2:54058942-54058961 Msa1255410:intron 35.0%
AGATGATAGAACAAGTCATC+AGG - chr8_2:54059082-54059101 Msa1255410:intron 35.0%
TATCTTGGAGATAATGCAGA+TGG - chr8_2:54059134-54059153 Msa1255410:intron 35.0%
GAAAATTTAGCGAAGAAGCT+TGG - chr8_2:54059158-54059177 Msa1255410:intron 35.0%
TCCACATATTCATCTTGCAA+CGG + chr8_2:54059248-54059267 None:intergenic 35.0%
AGATGAATATGTGGAAGCAA+TGG - chr8_2:54059253-54059272 Msa1255410:intron 35.0%
TGAATTTGAGCCAGAATATG+CGG - chr8_2:54059522-54059541 Msa1255410:intron 35.0%
GGTTCTTTCTCATCAATATC+TGG + chr8_2:54059562-54059581 None:intergenic 35.0%
TATTATTGGGCTGTAATCCT+CGG + chr8_2:54059699-54059718 None:intergenic 35.0%
! GCATAACTTGCAATGGTTTA+GGG - chr8_2:54059724-54059743 Msa1255410:intron 35.0%
! TCTCAATGTACTTGTTACAC+AGG + chr8_2:54059853-54059872 None:intergenic 35.0%
! TTGTATTTTATGGGTGCTAG+CGG - chr8_2:54059907-54059926 Msa1255410:intron 35.0%
TTCTAACTTGATATCCTACC+AGG - chr8_2:54059993-54060012 Msa1255410:intron 35.0%
AAGATTGTTGATCACTACAG+CGG - chr8_2:54060057-54060076 Msa1255410:intron 35.0%
ATAACAGAACTATGCCAAAG+GGG + chr8_2:54060320-54060339 None:intergenic 35.0%
GTATAACAGAACTATGCCAA+AGG + chr8_2:54060322-54060341 None:intergenic 35.0%
AAAGTAAAGGAAGGCAGATA+TGG - chr8_2:54060512-54060531 Msa1255410:intron 35.0%
TTGCAATAATTCCTCAACCT+AGG + chr8_2:54060606-54060625 None:intergenic 35.0%
! TAGGTTGAGGAATTATTGCA+AGG - chr8_2:54060605-54060624 Msa1255410:intron 35.0%
!! GTACCTGCTTTTGATAGAAT+AGG - chr8_2:54060747-54060766 Msa1255410:intron 35.0%
!! AGTGGACTGAGAAACATTAT+AGG - chr8_2:54060788-54060807 Msa1255410:intron 35.0%
GGTTCATGTATGAAAGTTTC+TGG - chr8_2:54060927-54060946 Msa1255410:intron 35.0%
!! TGAAAGTTTCTGGCTGTAAA+TGG - chr8_2:54060937-54060956 Msa1255410:intron 35.0%
!! GACATTTTCAAGAACTGGTT+GGG - chr8_2:54060959-54060978 Msa1255410:intron 35.0%
!! ACATTTTCAAGAACTGGTTG+GGG - chr8_2:54060960-54060979 Msa1255410:intron 35.0%
ATTAATTGCATTGTGAGGTG+TGG - chr8_2:54060995-54061014 Msa1255410:intron 35.0%
TGGCATAAACATGTGGAAAA+CGG - chr8_2:54061015-54061034 Msa1255410:intron 35.0%
!! AAACGGGTAATGGATATCAA+TGG - chr8_2:54061032-54061051 Msa1255410:intron 35.0%
ATGGATATCAATGGTTCAGT+AGG - chr8_2:54061041-54061060 Msa1255410:intron 35.0%
TCTTGCAATTGAAAGGGAAA+TGG - chr8_2:54061071-54061090 Msa1255410:intron 35.0%
!!! GATTTTGATTTGATTGCCCT+TGG - chr8_2:54061193-54061212 Msa1255410:intron 35.0%
TGCTATATATAGCATGTGCT+AGG - chr8_2:54061245-54061264 Msa1255410:intron 35.0%
TTATTGAAAATCTCAACGGG+AGG - chr8_2:54061359-54061378 Msa1255410:intron 35.0%
ACATGATCCCTATTTATGCA+TGG - chr8_2:54061387-54061406 Msa1255410:intron 35.0%
CCTCTTTCCATGCATAAATA+GGG + chr8_2:54061397-54061416 None:intergenic 35.0%
CCTATTTATGCATGGAAAGA+GGG - chr8_2:54061395-54061414 Msa1255410:intron 35.0%
ATATTACAGAACTGACCAAG+TGG - chr8_2:54061435-54061454 Msa1255410:intron 35.0%
TATTACAGAACTGACCAAGT+GGG - chr8_2:54061436-54061455 Msa1255410:intron 35.0%
! GTGCATTTTACTGTTTGGTT+TGG + chr8_2:54061721-54061740 None:intergenic 35.0%
! GTTCAGTGCATTTTACTGTT+TGG + chr8_2:54061726-54061745 None:intergenic 35.0%
! AACAGTTCAGTCTTTGAGTT+TGG + chr8_2:54061748-54061767 None:intergenic 35.0%
!! CAAACTTTTAAGAGTGCAGT+TGG - chr8_2:54061818-54061837 Msa1255410:intron 35.0%
TTCAGAAACACAAGTCAAGA+TGG + chr8_2:54061864-54061883 None:intergenic 35.0%
! TTCTGAAAAAAGAACCACAC+TGG - chr8_2:54061877-54061896 Msa1255410:intron 35.0%
TAGAATTCAAATCACCAGTG+TGG + chr8_2:54061894-54061913 None:intergenic 35.0%
TCCAAGGGGTCAAATAAATT+GGG + chr8_2:54062826-54062845 None:intergenic 35.0%
ATCCAAGGGGTCAAATAAAT+TGG + chr8_2:54062827-54062846 None:intergenic 35.0%
ATCTGTGTGAAATGATCCAA+GGG + chr8_2:54062841-54062860 None:intergenic 35.0%
AATCTGTGTGAAATGATCCA+AGG + chr8_2:54062842-54062861 None:intergenic 35.0%
AGAAAATGGGTCAGTTATTC+CGG - chr8_2:54063009-54063028 Msa1255410:CDS 35.0%
AAATTGTATTTCCCTGTCAC+TGG - chr8_2:54063055-54063074 Msa1255410:CDS 35.0%
AGAACATTGTAAGAAGCAAC+TGG + chr8_2:54063097-54063116 None:intergenic 35.0%
CTTGGTAAGATATTGTGAAC+TGG + chr8_2:54063326-54063345 None:intergenic 35.0%
CAGATAATCAGAATTAAGGC+TGG + chr8_2:54063452-54063471 None:intergenic 35.0%
CAGCCTTAATTCTGATTATC+TGG - chr8_2:54063450-54063469 Msa1255410:CDS 35.0%
!!! TTTGTGCAGACTAGTTTTTC+TGG - chr8_2:54063491-54063510 Msa1255410:CDS 35.0%
TGTTTGTCTTGGATGCTTTA+TGG - chr8_2:54064074-54064093 Msa1255410:CDS 35.0%
CCCACCATGTTTAAACTATT+AGG + chr8_2:54064393-54064412 None:intergenic 35.0%
ATACAATGCCCATTGTATTG+TGG - chr8_2:54064422-54064441 Msa1255410:CDS 35.0%
! TGACTTGTCCACAATACAAT+GGG + chr8_2:54064433-54064452 None:intergenic 35.0%
! ATGACTTGTCCACAATACAA+TGG + chr8_2:54064434-54064453 None:intergenic 35.0%
!!! GTTCTCGCAATTTTTTGCAT+CGG - chr8_2:54064552-54064571 Msa1255410:five_prime_UTR 35.0%
AATTTCCGATCACTTCGTGT+CGG - chr8_2:54058058-54058077 Msa1255410:three_prime_UTR 40.0%
TCCAATGGTTCCTCTCATTT+GGG + chr8_2:54058130-54058149 None:intergenic 40.0%
! TTGTCTTGTGGCATTGGAAA+TGG + chr8_2:54058172-54058191 None:intergenic 40.0%
! GTTCCATTTTCCACTTCTTC+AGG - chr8_2:54058198-54058217 Msa1255410:three_prime_UTR 40.0%
AATCATTGACATCAGGGCTA+GGG + chr8_2:54058329-54058348 None:intergenic 40.0%
TCTATTCATCAACCTGGTAC+TGG - chr8_2:54058462-54058481 Msa1255410:intron 40.0%
ACCTGTCTTCATCAAAAGAG+AGG - chr8_2:54058623-54058642 Msa1255410:intron 40.0%
! TCCTCTCTTTTGATGAAGAC+AGG + chr8_2:54058627-54058646 None:intergenic 40.0%
GAGGATAATGTTTCTCAGAC+AGG - chr8_2:54058642-54058661 Msa1255410:intron 40.0%
! CTGCATCTGATAATGTTCCT+AGG - chr8_2:54058907-54058926 Msa1255410:intron 40.0%
! CATCTGATAATGTTCCTAGG+AGG - chr8_2:54058910-54058929 Msa1255410:intron 40.0%
! AGAGATGATGGTGATGAAAG+TGG - chr8_2:54058954-54058973 Msa1255410:intron 40.0%
AAGATATAGCCCATCAGCAT+TGG + chr8_2:54059120-54059139 None:intergenic 40.0%
!! AATGCTGATGGGCTATATCT+TGG - chr8_2:54059119-54059138 Msa1255410:intron 40.0%
TCGGATTACTGAAGCATATG+AGG - chr8_2:54059196-54059215 Msa1255410:intron 40.0%
TATTCATCTTGCAACGGTGA+GGG + chr8_2:54059242-54059261 None:intergenic 40.0%
ATATTCATCTTGCAACGGTG+AGG + chr8_2:54059243-54059262 None:intergenic 40.0%
ACCGTTGCAAGATGAATATG+TGG - chr8_2:54059244-54059263 Msa1255410:intron 40.0%
AGAAAGAACCGATTGCACTT+CGG - chr8_2:54059572-54059591 Msa1255410:intron 40.0%
GATTCGAAGTCAAGAAGAGT+GGG - chr8_2:54059639-54059658 Msa1255410:intron 40.0%
! GGCATAACTTGCAATGGTTT+AGG - chr8_2:54059723-54059742 Msa1255410:intron 40.0%
! TGTATTTTATGGGTGCTAGC+GGG - chr8_2:54059908-54059927 Msa1255410:intron 40.0%
CTCTTCAATTACTTCCTGGT+AGG + chr8_2:54060010-54060029 None:intergenic 40.0%
TTCTTTGCAGTTACCCTATC+TGG + chr8_2:54060084-54060103 None:intergenic 40.0%
ACGGTTAGTGAACTCTTTCA+CGG + chr8_2:54060163-54060182 None:intergenic 40.0%
TGTGAGTGAGACTTAAGGTT+GGG - chr8_2:54060861-54060880 Msa1255410:intron 40.0%
!!! GTAGTAGAATTTTCAGGTCC+AGG - chr8_2:54060897-54060916 Msa1255410:intron 40.0%
!! GGACATTTTCAAGAACTGGT+TGG - chr8_2:54060958-54060977 Msa1255410:intron 40.0%
GGCATAAACATGTGGAAAAC+GGG - chr8_2:54061016-54061035 Msa1255410:intron 40.0%
AACATGTGGAAAACGGGTAA+TGG - chr8_2:54061022-54061041 Msa1255410:intron 40.0%
CCCTATTTATGCATGGAAAG+AGG - chr8_2:54061394-54061413 Msa1255410:intron 40.0%
CCCTCTTTCCATGCATAAAT+AGG + chr8_2:54061398-54061417 None:intergenic 40.0%
ATTACAGAACTGACCAAGTG+GGG - chr8_2:54061437-54061456 Msa1255410:intron 40.0%
CTACAACATAGAACTAGCCA+AGG - chr8_2:54061476-54061495 Msa1255410:intron 40.0%
GTTAGTTAGGTGTTCAACCT+TGG + chr8_2:54061496-54061515 None:intergenic 40.0%
GCCATCAAAAAATGGTATCC+AGG - chr8_2:54061672-54061691 Msa1255410:intron 40.0%
!!! GCCTGGATACCATTTTTTGA+TGG + chr8_2:54061676-54061695 None:intergenic 40.0%
!! AGTTTGCAAGTACTGAACCA+TGG + chr8_2:54061804-54061823 None:intergenic 40.0%
ATTCTCATCTCTTGGCAAGT+TGG + chr8_2:54062178-54062197 None:intergenic 40.0%
GTCAAATAAATTGGGACGGA+GGG + chr8_2:54062818-54062837 None:intergenic 40.0%
AGGGGTCAAATAAATTGGGA+CGG + chr8_2:54062822-54062841 None:intergenic 40.0%
TCCCAATTTATTTGACCCCT+TGG - chr8_2:54062822-54062841 Msa1255410:intron 40.0%
TCTGTGTGAAATGATCCAAG+GGG + chr8_2:54062840-54062859 None:intergenic 40.0%
GAAAATGGGTCAGTTATTCC+GGG - chr8_2:54063010-54063029 Msa1255410:CDS 40.0%
TCGTTGAAACAATTCCGTTG+CGG - chr8_2:54063232-54063251 Msa1255410:intron 40.0%
TGCAATAGAAGCTGATCGTT+CGG - chr8_2:54063298-54063317 Msa1255410:intron 40.0%
ATCAGAATTAAGGCTGGACA+TGG + chr8_2:54063446-54063465 None:intergenic 40.0%
! AATGGAGGGAGTATGTCTTA+AGG - chr8_2:54064023-54064042 Msa1255410:CDS 40.0%
TTGTCTTGGATGCTTTATGG+TGG - chr8_2:54064077-54064096 Msa1255410:CDS 40.0%
TATATGATGCAGAGCAATCC+AGG - chr8_2:54064297-54064316 Msa1255410:CDS 40.0%
CGACAAGAAATGCCAATTCA+TGG - chr8_2:54064329-54064348 Msa1255410:CDS 40.0%
TAGCCAGACCAAACTGAAAG+CGG - chr8_2:54057973-54057992 Msa1255410:three_prime_UTR 45.0%
TCCCAAATGAGAGGAACCAT+TGG - chr8_2:54058126-54058145 Msa1255410:three_prime_UTR 45.0%
CTCCAATGGTTCCTCTCATT+TGG + chr8_2:54058131-54058150 None:intergenic 45.0%
TGAGAGGAACCATTGGAGTA+AGG - chr8_2:54058133-54058152 Msa1255410:three_prime_UTR 45.0%
! TCTTGTGGCATTGGAAATGG+TGG + chr8_2:54058169-54058188 None:intergenic 45.0%
TAGCGTTTGTCTTGTGGCAT+TGG + chr8_2:54058178-54058197 None:intergenic 45.0%
TGGAACTAGCGTTTGTCTTG+TGG + chr8_2:54058184-54058203 None:intergenic 45.0%
GGCACAGTGACATTCAACTT+CGG - chr8_2:54058270-54058289 Msa1255410:CDS 45.0%
GAATCATTGACATCAGGGCT+AGG + chr8_2:54058330-54058349 None:intergenic 45.0%
ATCGGTGAATCTGTTGCATC+AGG + chr8_2:54058357-54058376 None:intergenic 45.0%
TCCACCTTCAACAAGCTTTC+CGG - chr8_2:54058419-54058438 Msa1255410:intron 45.0%
GACATAAACGACGAAAACGC+CGG + chr8_2:54058441-54058460 None:intergenic 45.0%
!! TTCATCAACCTGGTACTGGT+CGG - chr8_2:54058466-54058485 Msa1255410:intron 45.0%
GTAAAAGACGGTTTCTTCGG+AGG + chr8_2:54058684-54058703 None:intergenic 45.0%
TCTTGAGCTGCTTCTTCCAA+CGG + chr8_2:54058828-54058847 None:intergenic 45.0%
TTATCAGATGCAGCATCAGC+CGG + chr8_2:54058900-54058919 None:intergenic 45.0%
! GATGGTGATGAAAGTGGAAG+AGG - chr8_2:54058960-54058979 Msa1255410:intron 45.0%
GATGAAAGTGGAAGAGGAAG+AGG - chr8_2:54058966-54058985 Msa1255410:intron 45.0%
GTAATCCGATCCATCATCTC+AGG + chr8_2:54059185-54059204 None:intergenic 45.0%
ATTTGAGCCAGAATATGCGG+TGG - chr8_2:54059525-54059544 Msa1255410:intron 45.0%
TCAAACTCCACCGCATATTC+TGG + chr8_2:54059535-54059554 None:intergenic 45.0%
GAAAGAACCGATTGCACTTC+GGG - chr8_2:54059573-54059592 Msa1255410:intron 45.0%
GGATTCGAAGTCAAGAAGAG+TGG - chr8_2:54059638-54059657 Msa1255410:intron 45.0%
GTCAATCTTATCCATGACCG+AGG - chr8_2:54059679-54059698 Msa1255410:intron 45.0%
GTGAACTCTTTCACGGAAGA+TGG + chr8_2:54060156-54060175 None:intergenic 45.0%
! ACAAGGTGTCTCTTGTTCCT+AGG - chr8_2:54060586-54060605 Msa1255410:intron 45.0%
TGTCTCTTGTTCCTAGGTTG+AGG - chr8_2:54060592-54060611 Msa1255410:intron 45.0%
GCTACTGTGAGTGAGACTTA+AGG - chr8_2:54060856-54060875 Msa1255410:intron 45.0%
CTGTGAGTGAGACTTAAGGT+TGG - chr8_2:54060860-54060879 Msa1255410:intron 45.0%
ATACATGAACCTGACACTCC+TGG + chr8_2:54060918-54060937 None:intergenic 45.0%
TGAGGTGTGGCATAAACATG+TGG - chr8_2:54061008-54061027 Msa1255410:intron 45.0%
!! GGGACTTGTTATGCAGCAAA+GGG - chr8_2:54061326-54061345 Msa1255410:intron 45.0%
!! GGACTTGTTATGCAGCAAAG+GGG - chr8_2:54061327-54061346 Msa1255410:intron 45.0%
TTGTTATGCAGCAAAGGGGT+GGG - chr8_2:54061331-54061350 Msa1255410:intron 45.0%
! ACAGAGTTAGTTTCCCCACT+TGG + chr8_2:54061453-54061472 None:intergenic 45.0%
!!! CTGAACTGTCACTTTTGCCA+TGG - chr8_2:54061784-54061803 Msa1255410:intron 45.0%
GGTCAAATAAATTGGGACGG+AGG + chr8_2:54062819-54062838 None:intergenic 45.0%
TTAAGCTATGGCCAGTGACA+GGG + chr8_2:54063069-54063088 None:intergenic 45.0%
ATTAAGCTATGGCCAGTGAC+AGG + chr8_2:54063070-54063089 None:intergenic 45.0%
CTGAAGCTGAAGCAGTTCAT+TGG - chr8_2:54063160-54063179 Msa1255410:intron 45.0%
! CATCAGTTTCGTTTGGGTTC+AGG - chr8_2:54063361-54063380 Msa1255410:CDS 45.0%
!!! ATAAGTAAATTTTTTTTATA+GGG + chr8_2:54062289-54062308 None:intergenic 5.0%
!!! TATAAGTAAATTTTTTTTAT+AGG + chr8_2:54062290-54062309 None:intergenic 5.0%
AGCCAGACCAAACTGAAAGC+GGG - chr8_2:54057974-54057993 Msa1255410:three_prime_UTR 50.0%
TATCGCCGACACGAAGTGAT+CGG + chr8_2:54058066-54058085 None:intergenic 50.0%
! TCCACTTCTTCAGGTTTCGG+CGG - chr8_2:54058207-54058226 Msa1255410:exon 50.0%
TTCGGTGAAAAAGCTGCTCC+CGG - chr8_2:54058288-54058307 Msa1255410:intron 50.0%
AGGGTTAGGGTTAGGGTTAC+CGG + chr8_2:54058310-54058329 None:intergenic 50.0%
TGACATCAGGGCTAGGGTTA+GGG + chr8_2:54058323-54058342 None:intergenic 50.0%
TTGACATCAGGGCTAGGGTT+AGG + chr8_2:54058324-54058343 None:intergenic 50.0%
!! ACAGATTCACCGATTCCACC+TGG - chr8_2:54058363-54058382 Msa1255410:intron 50.0%
!! AACGCCGGAAAGCTTGTTGA+AGG + chr8_2:54058426-54058445 None:intergenic 50.0%
!! TCATCAACCTGGTACTGGTC+GGG - chr8_2:54058467-54058486 Msa1255410:intron 50.0%
GATTCTGTACCAACTGGTCG+TGG - chr8_2:54058540-54058559 Msa1255410:intron 50.0%
TCAAGAAGCTCCTCAAGCTC+CGG - chr8_2:54058842-54058861 Msa1255410:intron 50.0%
CGGATATGCCTGTTCACTAC+CGG + chr8_2:54058864-54058883 None:intergenic 50.0%
TGAACAGGCATATCCGCGTT+CGG - chr8_2:54058868-54058887 Msa1255410:intron 50.0%
AGTGGAAGAGGAAGAGGAAG+AGG - chr8_2:54058972-54058991 Msa1255410:intron 50.0%
AGAGGAAGAGGAAGAGGAAG+AGG - chr8_2:54058978-54058997 Msa1255410:intron 50.0%
GGAAGAGATGTGTATGCTCG+TGG - chr8_2:54058999-54059018 Msa1255410:intron 50.0%
!! AGGAGGAAGAGGTGATGGAA+GGG - chr8_2:54059049-54059068 Msa1255410:intron 50.0%
ATAGCGCGTTCCAATGCTGA+TGG - chr8_2:54059107-54059126 Msa1255410:intron 50.0%
TAGCGCGTTCCAATGCTGAT+GGG - chr8_2:54059108-54059127 Msa1255410:intron 50.0%
!! TTGGGCCTGAGATGATGGAT+CGG - chr8_2:54059177-54059196 Msa1255410:intron 50.0%
AGTGCATCCCGAAGTGCAAT+CGG + chr8_2:54059583-54059602 None:intergenic 50.0%
TCGAAGTCAAGAAGAGTGGG+AGG - chr8_2:54059642-54059661 Msa1255410:intron 50.0%
ATCACTACAGCGGACCAGAT+AGG - chr8_2:54060067-54060086 Msa1255410:intron 50.0%
TCACTACAGCGGACCAGATA+GGG - chr8_2:54060068-54060087 Msa1255410:intron 50.0%
ACGGAAGATGGTGCACTTGT+AGG + chr8_2:54060144-54060163 None:intergenic 50.0%
CCTGAAGAGAGATGACAGCA+CGG + chr8_2:54060182-54060201 None:intergenic 50.0%
CTCATTATGAGTGTGCCTGC+TGG - chr8_2:54060252-54060271 Msa1255410:intron 50.0%
GCAAGCAATAGAACACCAGC+AGG + chr8_2:54060270-54060289 None:intergenic 50.0%
GTTGAGTTATTGTGGCCTGC+TGG - chr8_2:54060820-54060839 Msa1255410:intron 50.0%
! GCCTGCTGGTCTGGTAAATT+TGG - chr8_2:54060834-54060853 Msa1255410:intron 50.0%
GCCAAATTTACCAGACCAGC+AGG + chr8_2:54060838-54060857 None:intergenic 50.0%
!!! TTTTCAGGTCCAGGAGTGTC+AGG - chr8_2:54060906-54060925 Msa1255410:intron 50.0%
!! GGGGACTTGTTATGCAGCAA+AGG - chr8_2:54061325-54061344 Msa1255410:intron 50.0%
! CTTGTTATGCAGCAAAGGGG+TGG - chr8_2:54061330-54061349 Msa1255410:intron 50.0%
ATGGTATCCAGGCCTGTTCA+TGG - chr8_2:54061683-54061702 Msa1255410:intron 50.0%
TAGTGAACCATGAACAGGCC+TGG + chr8_2:54061693-54061712 None:intergenic 50.0%
ATGGGTCAGTTATTCCGGGA+CGG - chr8_2:54063014-54063033 Msa1255410:CDS 50.0%
TGTTGCGCCCGCTTTCAGTT+TGG + chr8_2:54057984-54058003 None:intergenic 55.0%
AAACACGTATCAGCGTCGCG+AGG - chr8_2:54058021-54058040 Msa1255410:intron 55.0%
TTGTGATGCGGAGAGAGTGG+TGG + chr8_2:54058090-54058109 None:intergenic 55.0%
TGCTTGTGATGCGGAGAGAG+TGG + chr8_2:54058093-54058112 None:intergenic 55.0%
ACCGCCGAAACCTGAAGAAG+TGG + chr8_2:54058211-54058230 None:intergenic 55.0%
! ACTTCTTCAGGTTTCGGCGG+TGG - chr8_2:54058210-54058229 Msa1255410:exon 55.0%
GGGTTAGGGTTAGGGTTACC+GGG + chr8_2:54058309-54058328 None:intergenic 55.0%
CAGGGCTAGGGTTAGGGTTA+GGG + chr8_2:54058317-54058336 None:intergenic 55.0%
TCAGGGCTAGGGTTAGGGTT+AGG + chr8_2:54058318-54058337 None:intergenic 55.0%
!! GCCGGAAAGCTTGTTGAAGG+TGG + chr8_2:54058423-54058442 None:intergenic 55.0%
!! CATCAACCTGGTACTGGTCG+GGG - chr8_2:54058468-54058487 Msa1255410:intron 55.0%
!! ACTGTGCCAAAGGTGTTGCC+TGG - chr8_2:54058780-54058799 Msa1255410:intron 55.0%
!! CAAAGGTGTTGCCTGGAGGT+GGG - chr8_2:54058787-54058806 Msa1255410:intron 55.0%
CTGTTCACTACCGGAGCTTG+AGG + chr8_2:54058855-54058874 None:intergenic 55.0%
CTCAAGCTCCGGTAGTGAAC+AGG - chr8_2:54058853-54058872 Msa1255410:intron 55.0%
TATCCGCGTTCGGCAAACTC+CGG - chr8_2:54058878-54058897 Msa1255410:intron 55.0%
CTCTTCCTCCTCTACCACCA+CGG + chr8_2:54059040-54059059 None:intergenic 55.0%
GGTAGAGGAGGAAGAGGTGA+TGG - chr8_2:54059044-54059063 Msa1255410:intron 55.0%
!! GAGGAGGAAGAGGTGATGGA+AGG - chr8_2:54059048-54059067 Msa1255410:intron 55.0%
!! GGAGGAAGAGGTGATGGAAG+GGG - chr8_2:54059050-54059069 Msa1255410:intron 55.0%
!! GAAGAGGTGATGGAAGGGGA+AGG - chr8_2:54059054-54059073 Msa1255410:intron 55.0%
!! GGTGATGGAAGGGGAAGGTA+TGG - chr8_2:54059059-54059078 Msa1255410:intron 55.0%
GAAGCTTGGGCCTGAGATGA+TGG - chr8_2:54059172-54059191 Msa1255410:intron 55.0%
TGGGCTGTAATCCTCGGTCA+TGG + chr8_2:54059693-54059712 None:intergenic 55.0%
CCGTGCTGTCATCTCTCTTC+AGG - chr8_2:54060179-54060198 Msa1255410:intron 55.0%
GTTATTGTGGCCTGCTGGTC+TGG - chr8_2:54060825-54060844 Msa1255410:intron 55.0%
TCAAGAACTGGTTGGGGAGC+AGG - chr8_2:54060966-54060985 Msa1255410:intron 55.0%
GTCAGTTATTCCGGGACGGA+GGG - chr8_2:54063018-54063037 Msa1255410:CDS 55.0%
ACTATGTACTCCCTCCGTCC+CGG + chr8_2:54063031-54063050 None:intergenic 55.0%
! GGACGGAGGGAGTACATAGT+AGG - chr8_2:54063031-54063050 Msa1255410:CDS 55.0%
TGATGCAGAGCAATCCAGGC+TGG - chr8_2:54064301-54064320 Msa1255410:CDS 55.0%
GATGCAGAGCAATCCAGGCT+GGG - chr8_2:54064302-54064321 Msa1255410:CDS 55.0%
ATGCAGAGCAATCCAGGCTG+GGG - chr8_2:54064303-54064322 Msa1255410:CDS 55.0%
TTCTTGTCGAATCCCCAGCC+TGG + chr8_2:54064318-54064337 None:intergenic 55.0%
CGCCCGCTTTCAGTTTGGTC+TGG + chr8_2:54057979-54057998 None:intergenic 60.0%
GTATCAGCGTCGCGAGGTAG+CGG - chr8_2:54058027-54058046 Msa1255410:intron 60.0%
TCAGGTTTCGGCGGTGGTGA+TGG - chr8_2:54058216-54058235 Msa1255410:exon 60.0%
!! TCACCGATTCCACCTGGTGC+TGG - chr8_2:54058369-54058388 Msa1255410:intron 60.0%
CGACCAGCACCAGGTGGAAT+CGG + chr8_2:54058375-54058394 None:intergenic 60.0%
!! ATTCCACCTGGTGCTGGTCG+TGG - chr8_2:54058375-54058394 Msa1255410:intron 60.0%
GAACTGTCCCACCACGACCA+TGG + chr8_2:54058401-54058420 None:intergenic 60.0%
GTACCAACTGGTCGTGGACG+CGG - chr8_2:54058546-54058565 Msa1255410:intron 60.0%
!! GTGCCAAAGGTGTTGCCTGG+AGG - chr8_2:54058783-54058802 Msa1255410:intron 60.0%
CCACCTCCAGGCAACACCTT+TGG + chr8_2:54058789-54058808 None:intergenic 60.0%
!! CCAAAGGTGTTGCCTGGAGG+TGG - chr8_2:54058786-54058805 Msa1255410:intron 60.0%
! CTGTTCATCGGCTGCCTCCT+AGG + chr8_2:54058927-54058946 None:intergenic 60.0%
GATGTGTATGCTCGTGGCCG+AGG - chr8_2:54059005-54059024 Msa1255410:intron 60.0%
CGTGGTGGTAGAGGAGGAAG+AGG - chr8_2:54059038-54059057 Msa1255410:intron 60.0%
GGTCAGTTATTCCGGGACGG+AGG - chr8_2:54063017-54063036 Msa1255410:CDS 60.0%
GCAGCTATGCAGCACCGCAA+CGG + chr8_2:54063249-54063268 None:intergenic 60.0%
TGCCAGAACCACCACGACCG+CGG + chr8_2:54058254-54058273 None:intergenic 65.0%
GTCGTGGCCATGGTCGTGGT+GGG - chr8_2:54058391-54058410 Msa1255410:intron 65.0%
! AGGTGTTGCCTGGAGGTGGG+AGG - chr8_2:54058790-54058809 Msa1255410:intron 65.0%
! GGTGTTGCCTGGAGGTGGGA+GGG - chr8_2:54058791-54058810 Msa1255410:intron 65.0%
GTGTTGCCTGGAGGTGGGAG+GGG - chr8_2:54058792-54058811 Msa1255410:intron 65.0%
TGTTGCCTGGAGGTGGGAGG+GGG - chr8_2:54058793-54058812 Msa1255410:intron 65.0%
CAGCCGGAGTTTGCCGAACG+CGG + chr8_2:54058884-54058903 None:intergenic 65.0%
GTGTATGCTCGTGGCCGAGG+AGG - chr8_2:54059008-54059027 Msa1255410:intron 65.0%
CACCACGGCCTCTACCTCCT+CGG + chr8_2:54059025-54059044 None:intergenic 65.0%
GGTAGAGGCCGTGGTGGTAG+AGG - chr8_2:54059029-54059048 Msa1255410:intron 65.0%
AGAGGCCGTGGTGGTAGAGG+AGG - chr8_2:54059032-54059051 Msa1255410:intron 65.0%
! TCAGCGTCGCGAGGTAGCGG+CGG - chr8_2:54058030-54058049 Msa1255410:intron 70.0%
!! TTCGGCGGTGGTGATGGCCG+TGG - chr8_2:54058222-54058241 Msa1255410:CDS 70.0%
TGGCCACGACCAGCACCAGG+TGG + chr8_2:54058381-54058400 None:intergenic 70.0%
CCATGGCCACGACCAGCACC+AGG + chr8_2:54058384-54058403 None:intergenic 70.0%
!! CCTGGTGCTGGTCGTGGCCA+TGG - chr8_2:54058381-54058400 Msa1255410:intron 70.0%
GCTGGTCGTGGCCATGGTCG+TGG - chr8_2:54058387-54058406 Msa1255410:intron 70.0%
GGTCGTGGCCATGGTCGTGG+TGG - chr8_2:54058390-54058409 Msa1255410:intron 70.0%
!! CCTGGTACTGGTCGGGGACG+CGG - chr8_2:54058474-54058493 Msa1255410:intron 70.0%
CGACCGCGTCCACGACCAGT+TGG + chr8_2:54058552-54058571 None:intergenic 70.0%
ACTGGTCGTGGACGCGGTCG+AGG - chr8_2:54058552-54058571 Msa1255410:intron 70.0%
GCTCGTGGCCGAGGAGGTAG+AGG - chr8_2:54059014-54059033 Msa1255410:intron 70.0%
CGAGGAGGTAGAGGCCGTGG+TGG - chr8_2:54059023-54059042 Msa1255410:intron 70.0%
!! GGCGGTGGTGATGGCCGTGG+CGG - chr8_2:54058225-54058244 Msa1255410:CDS 75.0%
!! GGTGGTGATGGCCGTGGCGG+TGG - chr8_2:54058228-54058247 Msa1255410:CDS 75.0%
GGCCGCGGTCGTGGTGGTTC+TGG - chr8_2:54058249-54058268 Msa1255410:CDS 75.0%
CCGCGTCCCCGACCAGTACC+AGG + chr8_2:54058477-54058496 None:intergenic 75.0%
ACTGGTCGGGGACGCGGTCG+TGG - chr8_2:54058480-54058499 Msa1255410:intron 75.0%
TGCCTGGAGGTGGGAGGGGG+AGG - chr8_2:54058796-54058815 Msa1255410:intron 75.0%
GCCTGGAGGTGGGAGGGGGA+GGG - chr8_2:54058797-54058816 Msa1255410:intron 75.0%
CCTGGAGGTGGGAGGGGGAG+GGG - chr8_2:54058798-54058817 Msa1255410:intron 75.0%
CTGGAGGTGGGAGGGGGAGG+GGG - chr8_2:54058799-54058818 Msa1255410:intron 75.0%
GAGGGGGAGGGGGAAGCCGT+TGG - chr8_2:54058809-54058828 Msa1255410:intron 75.0%
GGCCGAGGAGGTAGAGGCCG+TGG - chr8_2:54059020-54059039 Msa1255410:intron 75.0%
! GATGGCCGTGGCGGTGGCCG+CGG - chr8_2:54058234-54058253 Msa1255410:CDS 80.0%
! CACGACCGCGGCCACCGCCA+CGG + chr8_2:54058242-54058261 None:intergenic 80.0%
! CGGGGACGCGGTCGTGGTCG+AGG - chr8_2:54058486-54058505 Msa1255410:intron 80.0%
! CCCCTCCCCCTCCCACCTCC+AGG + chr8_2:54058801-54058820 None:intergenic 80.0%
! CGTGGCGGTGGCCGCGGTCG+TGG - chr8_2:54058240-54058259 Msa1255410:CDS 85.0%
! GGCGGTGGCCGCGGTCGTGG+TGG - chr8_2:54058243-54058262 Msa1255410:CDS 85.0%
Chromosome Type Strat End Strand Name
chr8_2 gene 54057965 54064642 54057965 ID=Msa1255410;Name=Msa1255410
chr8_2 mRNA 54057965 54064642 54057965 ID=Msa1255410-mRNA-1;Parent=Msa1255410;Name=Msa1255410-mRNA-1;_AED=0.07;_eAED=0.07;_QI=167|1|1|1|0.5|0.6|5|231|522
chr8_2 exon 54057965 54058033 54057965 ID=Msa1255410-mRNA-1:exon:16753;Parent=Msa1255410-mRNA-1
chr8_2 exon 54058056 54058298 54058056 ID=Msa1255410-mRNA-1:exon:16752;Parent=Msa1255410-mRNA-1
chr8_2 exon 54062407 54062592 54062407 ID=Msa1255410-mRNA-1:exon:16751;Parent=Msa1255410-mRNA-1
chr8_2 exon 54062944 54063087 54062944 ID=Msa1255410-mRNA-1:exon:16750;Parent=Msa1255410-mRNA-1
chr8_2 exon 54063318 54064642 54063318 ID=Msa1255410-mRNA-1:exon:16749;Parent=Msa1255410-mRNA-1
chr8_2 five_prime_UTR 54064476 54064642 54064476 ID=Msa1255410-mRNA-1:five_prime_utr;Parent=Msa1255410-mRNA-1
chr8_2 CDS 54063318 54064475 54063318 ID=Msa1255410-mRNA-1:cds;Parent=Msa1255410-mRNA-1
chr8_2 CDS 54062944 54063087 54062944 ID=Msa1255410-mRNA-1:cds;Parent=Msa1255410-mRNA-1
chr8_2 CDS 54062407 54062592 54062407 ID=Msa1255410-mRNA-1:cds;Parent=Msa1255410-mRNA-1
chr8_2 CDS 54058218 54058298 54058218 ID=Msa1255410-mRNA-1:cds;Parent=Msa1255410-mRNA-1
chr8_2 three_prime_UTR 54058056 54058217 54058056 ID=Msa1255410-mRNA-1:three_prime_utr;Parent=Msa1255410-mRNA-1
chr8_2 three_prime_UTR 54057965 54058033 54057965 ID=Msa1255410-mRNA-1:three_prime_utr;Parent=Msa1255410-mRNA-1
Gene Sequence

>Msa1255410

ATGAGAGGAACCATTGGAGTAAGGCTTCAAAATTCCACCATTTCCAATGCCACAAGACAAACGCTAGTTCCATTTTCCACTTCTTCAGGTTTCGGCGGTGGTGATGGCCGTGGCGGTGGCCGCGGTCGTGGTGGTTCTGGCACAGTGACATTCAACTTCGGTGAAAAAGCTGCTCCCGGTAACCCTAACCCTAACCCTAGCCCTGATGTCAATGATTCTAAACCTGATGCAACAGATTCACCGATTCCACCTGGTGCTGGTCGTGGCCATGGTCGTGGTGGGACAGTTCCACCTTCAACAAGCTTTCCGGCGTTTTCGTCGTTTATGTCTTCTATTCATCAACCTGGTACTGGTCGGGGACGCGGTCGTGGTCGAGGTTTTGATCCATTGCCACCTCAATTTGAAAATGATTCTGTACCAACTGGTCGTGGACGCGGTCGAGGTTTTGATCCATTGCCACCTCAATTTGAAAATGATTCTGTACCTAAAAAACCTGTCTTCATCAAAAGAGAGGATAATGTTTCTCAGACAGGTGCAAATGATTCTTTGCCTCCGAAGAAACCGTCTTTTACTAGATTTGAGGATGTTAGACCAGTAGAGCCAATAGATTTATCTGGTAATAGTGAGAATGATAATAGATTTGTAATGACTGTGCCAAAGGTGTTGCCTGGAGGTGGGAGGGGGAGGGGGAAGCCGTTGGAAGAAGCAGCTCAAGAAGCTCCTCAAGCTCCGGTAGTGAACAGGCATATCCGCGTTCGGCAAACTCCGGCTGATGCTGCATCTGATAATGTTCCTAGGAGGCAGCCGATGAACAGATTTGTGAGAGATGATGGTGATGAAAGTGGAAGAGGAAGAGGAAGAGGAAGAGGAAGAGATGTGTATGCTCGTGGCCGAGGAGGTAGAGGCCGTGGTGGTAGAGGAGGAAGAGGTGATGGAAGGGGAAGGTATGGAGATGATAGAACAAGTCATCAGGATATAGCGCGTTCCAATGCTGATGGGCTATATCTTGGAGATAATGCAGATGGTGAAAATTTAGCGAAGAAGCTTGGGCCTGAGATGATGGATCGGATTACTGAAGCATATGAGGAGATTATTGAGAGAGTTTTACCCTCACCGTTGCAAGATGAATATGTGGAAGCAATGGACATTAATTGTGCTATTGAATTTGAGCCAGAATATGCGGTGGAGTTTGATAATCCAGATATTGATGAGAAAGAACCGATTGCACTTCGGGATGCACTAGAAAAAATGAAACCATTTTTGATGACATATGAAGGGATTCGAAGTCAAGAAGAGTGGGAGGAAGTAATTGAAGAGTTAATGCAACGGGTTCCTTTATTGAAAAAGATTGTTGATCACTACAGCGGACCAGATAGGGTAACTGCAAAGAAGCAACAAGAAGAATTAGAGAGAGTTGCTAAAACTCTTCCTACAAGTGCACCATCTTCCGTGAAAGAGTTCACTAACCGTGCTGTCATCTCTCTTCAGAGCAATCCAGGCTGGGGATTCGACAAGAAATGCCAATTCATGGATAAGCTAGTTTTTGAAGTGTCTCAGCATCACAAATAA

Protein sequence

>Msa1255410

MRGTIGVRLQNSTISNATRQTLVPFSTSSGFGGGDGRGGGRGRGGSGTVTFNFGEKAAPGNPNPNPSPDVNDSKPDATDSPIPPGAGRGHGRGGTVPPSTSFPAFSSFMSSIHQPGTGRGRGRGRGFDPLPPQFENDSVPTGRGRGRGFDPLPPQFENDSVPKKPVFIKREDNVSQTGANDSLPPKKPSFTRFEDVRPVEPIDLSGNSENDNRFVMTVPKVLPGGGRGRGKPLEEAAQEAPQAPVVNRHIRVRQTPADAASDNVPRRQPMNRFVRDDGDESGRGRGRGRGRDVYARGRGGRGRGGRGGRGDGRGRYGDDRTSHQDIARSNADGLYLGDNADGENLAKKLGPEMMDRITEAYEEIIERVLPSPLQDEYVEAMDINCAIEFEPEYAVEFDNPDIDEKEPIALRDALEKMKPFLMTYEGIRSQEEWEEVIEELMQRVPLLKKIVDHYSGPDRVTAKKQQEELERVAKTLPTSAPSSVKEFTNRAVISLQSNPGWGFDKKCQFMDKLVFEVSQHHK*