AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0532660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532660 MtrunA17_Chr4g0006131 89.792 480 37 2 5 472 27 506 0.0 890
Msa0532660 MtrunA17_Chr4g0006111 79.874 477 81 4 4 466 49 524 0.0 776
Msa0532660 MtrunA17_Chr4g0033261 66.454 471 143 7 6 466 27 492 0.0 629
Msa0532660 MtrunA17_Chr4g0033231 63.169 467 165 5 6 466 27 492 0.0 608
Msa0532660 MtrunA17_Chr2g0329191 60.499 481 160 8 16 467 30 509 0.0 581
Msa0532660 MtrunA17_Chr2g0329201 58.149 497 177 7 1 467 12 507 0.0 574
Msa0532660 MtrunA17_Chr4g0033271 57.086 501 182 7 1 468 12 512 0.0 560
Msa0532660 MtrunA17_Chr3g0088441 59.091 484 161 8 16 466 34 513 0.0 559
Msa0532660 MtrunA17_Chr4g0033311 58.264 484 165 8 16 466 35 514 0.0 555
Msa0532660 MtrunA17_Chr6g0482131 57.173 481 175 6 20 470 36 515 0.0 548
Msa0532660 MtrunA17_Chr4g0033341 56.996 486 180 8 11 468 60 544 0.0 546
Msa0532660 MtrunA17_Chr4g0033321 58.526 475 168 6 20 465 33 507 0.0 546
Msa0532660 MtrunA17_Chr6g0482071 54.635 507 189 8 1 470 14 516 0.0 545
Msa0532660 MtrunA17_Chr4g0033401 58.125 480 164 7 19 465 33 508 0.0 545
Msa0532660 MtrunA17_Chr4g0033191 55.765 477 182 6 19 466 42 518 0.0 544
Msa0532660 MtrunA17_Chr4g0033201 55.115 479 186 6 19 468 35 513 0.0 543
Msa0532660 MtrunA17_Chr4g0033331 57.053 475 175 6 20 465 39 513 0.0 538
Msa0532660 MtrunA17_Chr6g0482081 56.639 482 179 5 19 470 35 516 0.0 530
Msa0532660 MtrunA17_Chr2g0329321 54.453 494 165 9 4 466 23 487 0.0 516
Msa0532660 MtrunA17_Chr2g0301231 64.541 392 126 4 87 466 1 391 1.27e-175 498
Msa0532660 MtrunA17_Chr4g0010501 50.303 495 207 7 3 466 7 493 1.24e-170 489
Msa0532660 MtrunA17_Chr5g0430451 51.619 494 167 9 16 467 35 498 6.73e-161 464
Msa0532660 MtrunA17_Chr3g0087261 48.734 474 214 5 19 465 36 507 8.40e-157 454
Msa0532660 MtrunA17_Chr4g0043091 47.292 480 221 5 17 466 25 502 1.43e-155 451
Msa0532660 MtrunA17_Chr3g0087271 48.454 485 217 8 9 465 29 508 1.46e-149 436
Msa0532660 MtrunA17_Chr4g0042171 43.648 488 242 6 10 466 14 499 2.31e-143 420
Msa0532660 MtrunA17_Chr3g0090131 44.635 466 238 6 19 466 20 483 7.22e-137 403
Msa0532660 MtrunA17_Chr3g0090111 44.731 465 238 5 19 466 18 480 1.20e-136 402
Msa0532660 MtrunA17_Chr2g0317841 43.789 475 237 9 19 465 31 503 1.20e-134 399
Msa0532660 MtrunA17_Chr2g0317821 43.789 475 237 8 19 465 31 503 2.82e-134 397
Msa0532660 MtrunA17_Chr4g0074561 42.918 473 236 9 25 465 40 510 5.68e-131 389
Msa0532660 MtrunA17_Chr6g0482941 43.061 490 243 9 9 469 32 514 1.18e-130 388
Msa0532660 MtrunA17_Chr2g0288071 42.600 500 253 8 1 469 48 544 2.62e-130 388
Msa0532660 MtrunA17_Chr4g0074551 43.478 483 240 7 17 469 47 526 1.47e-129 387
Msa0532660 MtrunA17_Chr2g0288021 40.574 488 248 8 20 472 35 515 1.89e-127 380
Msa0532660 MtrunA17_Chr6g0482951 41.633 490 250 9 9 469 32 514 6.71e-127 378
Msa0532660 MtrunA17_Chr7g0242691 38.911 496 260 7 2 467 13 495 2.59e-118 356
Msa0532660 MtrunA17_Chr7g0242681 40.710 479 242 8 17 466 35 500 2.94e-115 349
Msa0532660 MtrunA17_Chr1g0195611 40.373 483 235 8 21 469 28 491 4.37e-115 348
Msa0532660 MtrunA17_Chr7g0234131 41.915 470 235 10 21 465 76 532 1.03e-114 348
Msa0532660 MtrunA17_Chr4g0006971 40.592 473 244 6 22 467 29 491 2.89e-114 346
Msa0532660 MtrunA17_Chr7g0234111 41.737 472 238 7 21 468 76 534 1.13e-113 345
Msa0532660 MtrunA17_Chr5g0428831 39.749 478 246 8 21 469 28 492 1.77e-113 344
Msa0532660 MtrunA17_Chr7g0234091 41.649 473 237 8 21 468 76 534 4.89e-113 343
Msa0532660 MtrunA17_Chr3g0087201 46.974 347 143 7 156 467 4 344 1.21e-99 302
Msa0532660 MtrunA17_Chr5g0418871 47.712 306 131 4 39 317 2 305 4.55e-93 285
Msa0532660 MtrunA17_Chr1g0195641 39.846 389 188 6 22 377 29 404 1.75e-88 276
Msa0532660 MtrunA17_Chr7g0230651 39.227 362 186 6 66 404 18 368 2.92e-84 264
Msa0532660 MtrunA17_Chr3g0087191 59.603 151 60 1 12 161 14 164 4.13e-60 194
Msa0532660 MtrunA17_Chr7g0227561 38.258 264 115 5 21 263 47 283 7.94e-56 187
Msa0532660 MtrunA17_Chr7g0236731 43.304 224 106 3 108 310 28 251 3.46e-48 167
Msa0532660 MtrunA17_Chr4g0068871 25.481 416 221 10 83 470 183 537 4.41e-29 120
Msa0532660 MtrunA17_Chr5g0418861 51.111 90 43 1 377 465 1 90 6.03e-26 101
Msa0532660 MtrunA17_Chr8g0352881 39.000 100 61 0 224 323 62 161 3.30e-17 79.0
Msa0532660 MtrunA17_Chr2g0301221 73.684 38 10 0 25 62 70 107 2.35e-12 63.5
Msa0532660 MtrunA17_Chr7g0227591 46.429 56 30 0 413 468 13 68 1.51e-11 60.1
Msa0532660 MtrunA17_Chr1g0195651 51.852 54 25 1 417 469 1 54 3.55e-11 59.3
Msa0532660 MtrunA17_Chr7g0236741 37.931 58 36 0 413 470 10 67 5.57e-11 58.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0532660 AT5G44640.1 46.600 500 230 8 1 469 12 505 1.30e-156 454
Msa0532660 AT2G44450.1 47.284 497 214 8 9 469 20 504 2.01e-154 449
Msa0532660 AT5G42260.1 46.951 492 224 8 1 461 12 497 1.03e-153 447
Msa0532660 AT2G44480.1 46.250 480 230 5 17 468 32 511 3.42e-151 441
Msa0532660 AT2G44480.3 46.250 480 230 5 17 468 63 542 6.24e-151 441
Msa0532660 AT1G26560.1 47.908 478 216 7 19 465 31 506 3.61e-150 438
Msa0532660 AT5G24550.1 47.925 482 217 8 20 468 32 512 2.81e-149 436
Msa0532660 AT3G60130.1 46.012 489 227 8 9 466 19 501 7.34e-148 432
Msa0532660 AT2G44490.1 44.491 481 234 7 22 469 16 496 3.47e-147 432
Msa0532660 AT5G54570.1 44.835 484 233 7 14 465 24 505 1.28e-145 427
Msa0532660 AT3G60120.1 45.935 492 224 8 12 467 6 491 6.44e-145 426
Msa0532660 AT3G60140.1 45.885 486 232 6 16 470 22 507 1.31e-143 424
Msa0532660 AT5G24540.1 46.107 488 217 8 20 468 32 512 4.41e-143 421
Msa0532660 AT2G25630.1 44.399 491 225 7 3 465 13 483 9.38e-142 416
Msa0532660 AT5G36890.2 45.806 465 232 6 21 466 17 480 1.51e-139 410
Msa0532660 AT5G36890.1 45.806 465 232 6 21 466 17 480 2.49e-139 409
Msa0532660 AT3G18080.1 45.228 482 221 9 20 468 39 510 2.49e-138 408
Msa0532660 AT1G51470.1 44.515 474 234 7 16 465 41 509 1.70e-137 405
Msa0532660 AT1G75940.1 43.232 495 243 6 9 465 23 517 1.70e-137 406
Msa0532660 AT1G47600.1 44.304 474 235 7 16 465 41 509 4.37e-137 404
Msa0532660 AT1G47600.2 44.304 474 234 8 16 465 41 508 1.22e-135 401
Msa0532660 AT3G09260.1 43.177 491 245 6 7 467 26 512 3.14e-135 400
Msa0532660 AT2G44460.1 45.380 487 236 6 10 466 19 505 5.49e-135 402
Msa0532660 AT1G66280.1 44.885 479 229 7 19 465 35 510 1.94e-134 398
Msa0532660 AT3G18070.1 44.259 479 230 9 20 469 30 500 2.09e-134 397
Msa0532660 AT3G03640.1 42.740 489 247 6 11 466 25 513 7.37e-134 397
Msa0532660 AT3G18070.3 44.050 479 225 9 20 469 30 494 1.45e-133 395
Msa0532660 AT2G44470.3 42.915 494 241 8 8 465 17 505 5.35e-133 397
Msa0532660 AT1G66270.1 43.724 478 236 6 19 465 35 510 4.67e-132 392
Msa0532660 AT3G21370.1 43.145 496 239 10 7 466 24 512 1.31e-131 391
Msa0532660 AT1G61820.1 42.562 484 235 10 21 468 31 507 1.04e-130 388
Msa0532660 AT1G52400.3 42.510 494 245 9 7 466 28 516 4.07e-130 387
Msa0532660 AT1G52400.1 42.510 494 245 9 7 466 28 516 4.07e-130 387
Msa0532660 AT1G66270.2 43.515 478 235 7 19 465 35 508 7.61e-130 386
Msa0532660 AT5G28510.1 41.700 494 251 6 7 465 28 519 5.73e-129 384
Msa0532660 AT2G44480.2 45.232 409 197 4 87 468 1 409 2.00e-126 374
Msa0532660 AT3G60130.2 45.673 416 190 7 81 466 40 449 1.88e-123 368
Msa0532660 AT5G25980.2 42.708 480 238 11 19 466 49 523 2.17e-123 370
Msa0532660 AT4G21760.2 41.387 476 243 9 25 471 59 527 4.49e-123 370
Msa0532660 AT2G32860.1 39.364 503 254 10 10 471 84 576 5.60e-123 372
Msa0532660 AT2G32860.2 39.130 506 252 11 10 471 84 577 1.93e-121 368
Msa0532660 AT4G27830.1 40.657 487 245 8 9 465 12 484 3.82e-121 363
Msa0532660 AT1G02850.2 40.795 478 241 9 17 466 23 486 6.26e-121 363
Msa0532660 AT5G26000.1 42.171 479 239 11 20 465 38 511 7.12e-121 364
Msa0532660 AT4G21760.1 40.842 475 237 9 25 471 59 517 5.87e-120 362
Msa0532660 AT5G54570.3 42.326 430 215 6 14 412 24 451 1.76e-119 357
Msa0532660 AT3G60130.3 44.819 415 184 7 81 466 40 438 4.97e-119 356
Msa0532660 AT1G61810.1 41.250 480 249 10 20 468 33 510 2.29e-118 357
Msa0532660 AT3G62750.1 40.167 478 247 9 9 465 14 473 2.56e-118 356
Msa0532660 AT5G54570.2 44.390 410 195 6 87 465 1 408 5.32e-118 353
Msa0532660 AT3G62750.2 40.167 478 247 9 9 465 40 499 6.56e-118 356
Msa0532660 AT1G02850.5 38.767 503 243 9 15 466 21 509 1.49e-117 355
Msa0532660 AT1G02850.4 38.690 504 243 10 15 466 21 510 1.09e-115 350
Msa0532660 AT5G24540.2 43.953 430 196 8 20 411 32 454 1.40e-114 345
Msa0532660 AT1G02850.1 39.832 477 220 9 17 466 23 459 5.71e-114 344
Msa0532660 AT4G27820.1 39.506 486 244 9 11 465 16 482 2.69e-113 343
Msa0532660 AT1G61810.3 41.575 457 235 9 20 445 33 488 1.44e-112 343
Msa0532660 AT4G22100.1 40.126 476 244 9 21 468 23 485 1.52e-111 339
Msa0532660 AT2G44470.1 41.458 439 217 7 8 411 17 450 1.27e-109 332
Msa0532660 AT1G45191.4 40.042 472 240 8 21 466 30 484 1.77e-109 333
Msa0532660 AT3G60140.2 45.524 391 183 5 16 376 22 412 2.45e-109 332
Msa0532660 AT3G62740.1 37.910 488 249 12 9 465 14 478 7.28e-109 332
Msa0532660 AT1G45191.6 39.085 481 243 9 21 466 30 495 8.08e-106 325
Msa0532660 AT1G60090.2 38.266 473 253 7 20 466 24 483 8.58e-106 324
Msa0532660 AT1G52400.2 41.096 438 220 8 7 411 28 460 7.14e-105 320
Msa0532660 AT1G45191.1 39.059 489 244 10 21 466 30 507 9.83e-105 322
Msa0532660 AT1G45191.2 39.203 477 243 9 21 466 30 490 1.82e-104 321
Msa0532660 AT5G25980.3 41.509 424 213 9 19 412 49 467 3.12e-104 319
Msa0532660 AT5G25980.1 41.509 424 213 9 19 412 49 467 3.12e-104 319
Msa0532660 AT2G44450.2 45.205 365 153 7 140 469 1 353 9.57e-102 308
Msa0532660 AT1G60090.1 37.370 479 256 9 20 466 24 490 1.45e-101 313
Msa0532660 AT5G26000.2 40.566 424 216 9 20 412 38 456 2.23e-100 308
Msa0532660 AT3G62750.4 39.202 426 221 8 9 414 40 447 1.74e-99 306
Msa0532660 AT2G44470.2 44.880 332 156 4 8 312 17 348 6.42e-97 298
Msa0532660 AT4G27830.2 39.364 409 205 7 87 465 1 396 3.86e-95 294
Msa0532660 AT2G44480.4 47.508 301 132 3 17 291 63 363 1.10e-93 289
Msa0532660 AT1G02850.3 38.780 410 193 7 17 376 23 424 7.03e-93 288
Msa0532660 AT3G62740.2 38.028 426 211 11 9 404 14 416 8.05e-93 288
Msa0532660 AT3G62750.7 43.077 325 160 5 9 316 14 330 2.44e-91 282
Msa0532660 AT3G62750.8 43.077 325 160 5 9 316 14 330 2.44e-91 282
Msa0532660 AT3G62750.6 38.500 400 213 7 87 465 1 388 6.97e-91 283
Msa0532660 AT3G62750.5 38.500 400 213 7 87 465 1 388 6.97e-91 283
Msa0532660 AT3G18070.4 44.340 318 148 4 20 312 30 343 1.17e-90 281
Msa0532660 AT1G61810.5 39.563 412 217 9 87 468 1 410 1.96e-90 282
Msa0532660 AT3G62750.3 43.077 325 160 5 9 316 40 356 3.81e-90 281
Msa0532660 AT4G27820.2 37.805 410 211 7 87 465 1 397 6.68e-88 275
Msa0532660 AT4G27820.3 37.805 410 211 7 87 465 1 397 6.68e-88 275
Msa0532660 AT5G48375.1 38.915 424 198 11 19 430 37 411 6.95e-88 276
Msa0532660 AT1G61810.4 39.433 388 203 9 20 376 33 419 7.49e-87 273
Msa0532660 AT1G61820.3 39.353 371 184 8 133 468 4 368 3.58e-84 264
Msa0532660 AT1G45191.5 43.533 317 148 4 21 312 30 340 8.32e-84 264
Msa0532660 AT1G45191.3 43.533 317 148 4 21 312 30 340 1.31e-83 264
Msa0532660 AT2G44460.2 43.175 359 174 6 138 466 1 359 8.49e-83 263
Msa0532660 AT1G60270.1 39.452 365 186 6 20 358 24 379 4.76e-82 259
Msa0532660 AT2G44480.5 43.682 277 153 3 195 468 29 305 4.07e-77 244
Msa0532660 AT3G18070.2 40.120 334 167 7 165 469 94 423 3.13e-72 234
Msa0532660 AT3G18070.2 56.452 62 27 0 20 81 30 91 1.34e-17 85.1
Msa0532660 AT1G51490.1 38.551 345 175 10 27 344 27 361 1.26e-69 228
Msa0532660 AT3G18070.7 43.214 280 150 6 195 469 36 311 2.76e-68 221
Msa0532660 AT1G61810.2 41.636 269 130 4 20 262 33 300 2.50e-67 218
Msa0532660 AT1G60270.2 36.913 298 156 5 87 358 1 292 1.37e-56 190
Msa0532660 AT3G18070.5 34.959 369 167 12 20 378 30 335 5.66e-56 190
Msa0532660 AT5G16580.1 34.164 281 154 7 165 422 27 299 1.31e-41 150
Msa0532660 AT3G18070.6 40.212 189 107 4 195 378 36 223 8.62e-37 135
Msa0532660 AT3G06510.1 25.180 417 223 10 82 470 159 514 4.54e-30 124
Msa0532660 AT3G06510.2 24.769 432 240 10 82 470 159 548 1.12e-29 122

Find 128 sgRNAs with CRISPR-Local

Find 634 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTGAACATAATAGAATTAT+TGG 0.142938 4_1:-6979674 Msa0532660:CDS
CTTAAATCACCCCTCTTTAT+TGG 0.162034 4_1:+6979472 None:intergenic
CGAGATACAGGGTGTGATTT+TGG 0.174440 4_1:+6979436 None:intergenic
GATATTTGCTTCCTGGAATT+TGG 0.177328 4_1:-6981581 Msa0532660:CDS
GAGCAATCTAAGAGTCTTAT+TGG 0.216931 4_1:-6981133 Msa0532660:CDS
ACGATTATCATAACAGAAAA+TGG 0.280720 4_1:-6980298 Msa0532660:intron
GCTTTGTCAGCGAGAATATT+AGG 0.282531 4_1:-6982085 Msa0532660:intron
CAAAGCTCACACAGTATTAT+TGG 0.283801 4_1:+6979629 None:intergenic
ATACTTTGCATGGTCCCTTT+TGG 0.290939 4_1:-6979810 Msa0532660:CDS
CAGGGTCAAAATGGTGTAAT+AGG 0.298560 4_1:-6981425 Msa0532660:CDS
ACGAAATATCAGGGTCAAAA+TGG 0.301030 4_1:-6981434 Msa0532660:CDS
CTTTGTGGATATTTGCTTCC+TGG 0.303992 4_1:-6981588 Msa0532660:CDS
TGTTTGTCCAAAGGGGATTC+AGG 0.305206 4_1:-6980359 Msa0532660:CDS
TACAAAACGTACCTGGTAAT+TGG 0.306037 4_1:+6987693 None:intergenic
AGCTCTCTGCCCGGTGGTTT+AGG 0.309537 4_1:-6979703 Msa0532660:CDS
GACGGATACACTGTGCGTTT+TGG 0.311280 4_1:-6979770 Msa0532660:CDS
CAATAAAGAGGGGTGATTTA+AGG 0.315275 4_1:-6979471 Msa0532660:three_prime_UTR
GACGCCCTTGATTTCATGTT+TGG 0.322541 4_1:-6981335 Msa0532660:CDS
CAAGCCTTACAAGATGATTA+TGG 0.348583 4_1:-6982110 Msa0532660:CDS
TTCTTGTTTCGCTCAGGTCT+TGG 0.348865 4_1:-6979288 Msa0532660:three_prime_UTR
TCTAATGGGTCAGTTGAGTA+TGG 0.348923 4_1:+6981374 None:intergenic
AATGTATAAAACGAAATATC+AGG 0.351551 4_1:-6981444 Msa0532660:CDS
ATAATCATCTTGTAAGGCTT+GGG 0.354884 4_1:+6982112 None:intergenic
AAATATATATACCTGGTGTA+TGG 0.360290 4_1:+6987161 None:intergenic
ATCGATGAGCTACTTAATAA+TGG 0.365239 4_1:-6982263 Msa0532660:intron
TTGTAAAATCTAATTCCGTC+TGG 0.379933 4_1:+6982293 None:intergenic
CAATATCCTTGGCCAAGATA+TGG 0.382965 4_1:+6982438 None:intergenic
TCTGCAGCGGGCGGCGCCGA+CGG 0.383995 4_1:-6981034 Msa0532660:CDS
AGGCAAGGTGTGAATGTAAA+AGG 0.387936 4_1:-6979833 Msa0532660:CDS
ACATAAGACACCATGCTTGC+TGG 0.388660 4_1:+6981184 None:intergenic
CTATTACTTGGCAATATCCT+TGG 0.390771 4_1:+6982427 None:intergenic
CATGAAGACGGAAGAGGAAT+TGG 0.391004 4_1:-6987202 Msa0532660:CDS
CGTCCTCCACGTTGCAGATC+CGG 0.395060 4_1:-6979207 Msa0532660:three_prime_UTR
AGAAGAAGAAACTAGAGTTT+TGG 0.395376 4_1:+6979498 None:intergenic
TGATCACTATCATCGCTATA+AGG 0.396584 4_1:-6986291 Msa0532660:intron
TTACTTTGTCTCCAAATTCC+AGG 0.398270 4_1:+6981570 None:intergenic
TCCATTCAAAGTTGTCCAAA+AGG 0.405927 4_1:+6979795 None:intergenic
GGATACTCTCCTGTTGTTAG+TGG 0.408095 4_1:+6981205 None:intergenic
TGGCTATATGTTTGTCCAAA+GGG 0.410402 4_1:-6980367 Msa0532660:CDS
GCTGCAGAATGTAGGGGAAT+TGG 0.416752 4_1:+6981049 None:intergenic
CATACAGATTCTCCATATCT+TGG 0.418726 4_1:-6982450 Msa0532660:CDS
CATAATCATCTTGTAAGGCT+TGG 0.430388 4_1:+6982111 None:intergenic
GCATAAATAGAGGCAATAAC+AGG 0.437739 4_1:+6987778 None:intergenic
GATTGCTCTTGAGTGAACTT+TGG 0.449878 4_1:+6981148 None:intergenic
AACCACCGGGCAGAGAGCTT+AGG 0.450563 4_1:+6979707 None:intergenic
TTGCCTTTCTTGTTTCGCTC+AGG 0.451091 4_1:-6979294 Msa0532660:three_prime_UTR
TTGGAGACAAAGTAAAGCAT+TGG 0.451185 4_1:-6981562 Msa0532660:CDS
TGGAGACAAAGTAAAGCATT+GGG 0.453879 4_1:-6981561 Msa0532660:CDS
TATTAAGTAGCTCATCGATC+AGG 0.456055 4_1:+6982267 None:intergenic
GCCGCCCGCTGCAGAATGTA+GGG 0.460089 4_1:+6981042 None:intergenic
CGCCGCCCGCTGCAGAATGT+AGG 0.462140 4_1:+6981041 None:intergenic
TTTATACAACCACTAACAAC+AGG 0.463135 4_1:-6981214 Msa0532660:CDS
GTCATTGATTGAATCTGCAT+TGG 0.463783 4_1:+6979235 None:intergenic
CTTCTTCTTCACCAATAAAG+AGG 0.469041 4_1:-6979483 Msa0532660:three_prime_UTR
CAAAATGGTGTAATAGGCAT+TGG 0.471411 4_1:-6981419 Msa0532660:CDS
ACCATCCAAACATGAAATCA+AGG 0.473106 4_1:+6981330 None:intergenic
AGCAAGCATGGTGTCTTATG+TGG 0.473776 4_1:-6981182 Msa0532660:CDS
ACCACCGGGCAGAGAGCTTA+GGG 0.475465 4_1:+6979708 None:intergenic
ATCACTCGAAGAGGCGCTCA+TGG 0.478154 4_1:-6980028 Msa0532660:CDS
AGCAATCTAAGAGTCTTATT+GGG 0.478362 4_1:-6981132 Msa0532660:CDS
GCCTCCATAATCATCTTGTA+AGG 0.480473 4_1:+6982106 None:intergenic
AGTAGGTCCTGAATCCCCTT+TGG 0.484753 4_1:+6980352 None:intergenic
ACACTTTGAGTACATCAGAT+TGG 0.486476 4_1:-6981514 Msa0532660:CDS
ATGACAGATGTGAATAAAGA+AGG 0.487306 4_1:-6980489 Msa0532660:intron
GCATTGGATTAAACTCTCAC+TGG 0.490284 4_1:-6981403 Msa0532660:CDS
AATATATATACCTGGTGTAT+GGG 0.492563 4_1:+6987162 None:intergenic
TTCTTCTTCACCAATAAAGA+GGG 0.499658 4_1:-6979482 Msa0532660:three_prime_UTR
CCATTCAAAGTTGTCCAAAA+GGG 0.499789 4_1:+6979796 None:intergenic
GGGAATTGGTTTCGTTGCAT+TGG 0.500156 4_1:+6981063 None:intergenic
CCCTTGATTTCATGTTTGGA+TGG 0.504970 4_1:-6981331 Msa0532660:intron
TGTAAAATCTAATTCCGTCT+GGG 0.505528 4_1:+6982294 None:intergenic
AACTTTGTTGATTATGACAA+TGG 0.506223 4_1:-6979743 Msa0532660:CDS
GTACTCAAAGTGTAAGAGAA+TGG 0.519200 4_1:+6981524 None:intergenic
GAAATCAAGGGCGTCTTCGA+CGG 0.520163 4_1:+6981343 None:intergenic
AAAACTGTCAGCATAAATAG+AGG 0.520509 4_1:+6987768 None:intergenic
AATAAAGAAGGGACATACAT+TGG 0.523480 4_1:-6980477 Msa0532660:CDS
GACAACTTTGAATGGAATGA+CGG 0.527539 4_1:-6979788 Msa0532660:CDS
CATCTGCATGAGCAAGAAGT+TGG 0.530133 4_1:+6981474 None:intergenic
AGACCTGAGCGAAACAAGAA+AGG 0.536233 4_1:+6979291 None:intergenic
TACTGGCTCCTCCAATTACC+AGG 0.536244 4_1:-6987704 Msa0532660:intron
ACGGAAGAGGAATTGGTACA+TGG 0.537410 4_1:-6987195 Msa0532660:CDS
AATATGTGCAGGCTGCAACT+TGG 0.539391 4_1:-6980387 Msa0532660:intron
CTTCGGAATACCCATGTCTC+CGG 0.540785 4_1:+6979188 None:intergenic
CAAGAAACTTCCTAAACCAC+CGG 0.545200 4_1:+6979693 None:intergenic
ATGCAGAAGGAAAACTAAGT+GGG 0.545587 4_1:-6982325 Msa0532660:intron
TTGGCTATATGTTTGTCCAA+AGG 0.547740 4_1:-6980368 Msa0532660:CDS
ATTCCCCTACATTCTGCAGC+GGG 0.553434 4_1:-6981046 Msa0532660:CDS
TTTCCTTTGTGTACAACAGT+AGG 0.554600 4_1:+6980335 None:intergenic
ATTGCATACAGGGAAGGTAA+AGG 0.557945 4_1:-6986339 Msa0532660:intron
CCCCTACATTCTGCAGCGGG+CGG 0.559665 4_1:-6981043 Msa0532660:CDS
GAAGTTGGTTGTGTGTTGAC+TGG 0.560031 4_1:+6981489 None:intergenic
GCTGTACATGAAGACGGAAG+AGG 0.569110 4_1:-6987208 Msa0532660:CDS
GATTCTCCATATCTTGGCCA+AGG 0.571513 4_1:-6982444 Msa0532660:CDS
CATACAGGGAAGGTAAAGGA+TGG 0.571680 4_1:-6986335 Msa0532660:intron
GACACCCTAAGCTCTCTGCC+CGG 0.573913 4_1:-6979712 Msa0532660:CDS
ATGTATAAAACGAAATATCA+GGG 0.576545 4_1:-6981443 Msa0532660:CDS
GTGTTGATAATGTAGTATGA+AGG 0.577599 4_1:-6987232 Msa0532660:intron
GATATATTTGCCCATACACC+AGG 0.579641 4_1:-6987172 Msa0532660:intron
AGGGACATACATTGGAGCAT+GGG 0.581493 4_1:-6980469 Msa0532660:intron
TGACAGATGTGAATAAAGAA+GGG 0.582527 4_1:-6980488 Msa0532660:intron
AAGGGACATACATTGGAGCA+TGG 0.582897 4_1:-6980470 Msa0532660:CDS
AGGAGAGTATCCAGCAAGCA+TGG 0.588296 4_1:-6981194 Msa0532660:CDS
TATGCAGAAGGAAAACTAAG+TGG 0.588404 4_1:-6982326 Msa0532660:intron
GTGTGTTTGTCGTCTTTGTG+TGG 0.592863 4_1:-6979323 Msa0532660:three_prime_UTR
AAAACGTACCTGGTAATTGG+AGG 0.599628 4_1:+6987696 None:intergenic
GGCTATATGTTTGTCCAAAG+GGG 0.602874 4_1:-6980366 Msa0532660:CDS
AGCTCACACAGTATTATTGG+TGG 0.605868 4_1:+6979632 None:intergenic
GCAAGCATGGTGTCTTATGT+GGG 0.610839 4_1:-6981181 Msa0532660:CDS
TGCAGAAGGAAAACTAAGTG+GGG 0.612476 4_1:-6982324 Msa0532660:intron
TAATCATCTTGTAAGGCTTG+GGG 0.615173 4_1:+6982113 None:intergenic
ATGTAAAAGGATACTTTGCA+TGG 0.622027 4_1:-6979820 Msa0532660:CDS
TCCAACACTATCACTCGAAG+AGG 0.624433 4_1:-6980037 Msa0532660:CDS
TCTTCTTCACCAATAAAGAG+GGG 0.629116 4_1:-6979481 Msa0532660:three_prime_UTR
GAAGGTGCTGTACATGAAGA+CGG 0.631814 4_1:-6987214 Msa0532660:CDS
GCCTTACAAGATGATTATGG+AGG 0.632737 4_1:-6982107 Msa0532660:CDS
CCATCCAAACATGAAATCAA+GGG 0.640294 4_1:+6981331 None:intergenic
CCGCCCGCTGCAGAATGTAG+GGG 0.641417 4_1:+6981043 None:intergenic
GAAAACACTATTAACGCCGT+CGG 0.643210 4_1:+6981018 None:intergenic
GCCTCTTCGAGTGATAGTGT+TGG 0.646940 4_1:+6980036 None:intergenic
TGCATTGGCAGCATACATGC+TGG 0.650774 4_1:+6981078 None:intergenic
CGGAAGAGGAATTGGTACAT+GGG 0.654494 4_1:-6987194 Msa0532660:CDS
GGACCTACTGTTGTACACAA+AGG 0.659998 4_1:-6980338 Msa0532660:CDS
AAGAAACTTCCTAAACCACC+GGG 0.661886 4_1:+6979694 None:intergenic
AATTCCCCTACATTCTGCAG+CGG 0.669295 4_1:-6981047 Msa0532660:CDS
GCAGAAGGAAAACTAAGTGG+GGG 0.675074 4_1:-6982323 Msa0532660:intron
TCTCCGGATCTGCAACGTGG+AGG 0.682726 4_1:+6979204 None:intergenic
ACCCTAAGCTCTCTGCCCGG+TGG 0.683098 4_1:-6979709 Msa0532660:CDS
ATGTCTCCGGATCTGCAACG+TGG 0.714078 4_1:+6979201 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTTTTTTTTTTGAAAGA+AGG + chr4_1:6980739-6980758 None:intergenic 10.0%
!!! AAAATTATTTGATTTTTTGA+AGG + chr4_1:6980842-6980861 None:intergenic 10.0%
!!! AATTTTCATTCTATTATATT+AGG - chr4_1:6980955-6980974 Msa0532660:intron 10.0%
!!! TATTTTTTCTTCTAAAATTT+GGG + chr4_1:6981272-6981291 None:intergenic 10.0%
!!! TTATTTTTTCTTCTAAAATT+TGG + chr4_1:6981273-6981292 None:intergenic 10.0%
!!! AATTCAAAGAATTTTTTTTT+GGG + chr4_1:6982302-6982321 None:intergenic 10.0%
!!! AAATTCAAAGAATTTTTTTT+TGG + chr4_1:6982303-6982322 None:intergenic 10.0%
!! AAAAAAAAATTCTTTGAATT+TGG - chr4_1:6982302-6982321 Msa0532660:CDS 10.0%
!! ATAAAACAAATAAATTGATA+GGG - chr4_1:6984129-6984148 Msa0532660:intron 10.0%
!! TTCATAATAATATAAATTGA+TGG - chr4_1:6984814-6984833 Msa0532660:intron 10.0%
!! TTCTAATAAATTTAAATCAT+AGG - chr4_1:6986924-6986943 Msa0532660:intron 10.0%
!!! GGAATTAAACATATTTTTTT+TGG + chr4_1:6979527-6979546 None:intergenic 15.0%
!! AAGAAAAAAATATATATACC+TGG + chr4_1:6979851-6979870 None:intergenic 15.0%
!!! TTTATTTTTATAGCTGTATA+TGG + chr4_1:6979969-6979988 None:intergenic 15.0%
!!! AATAGTTTTTTTTACACTAT+CGG + chr4_1:6980464-6980483 None:intergenic 15.0%
!!! AAATAATTTTAGTGATCAAA+AGG - chr4_1:6980852-6980871 Msa0532660:intron 15.0%
!! TAAAAAAAAATGTATGCTAT+TGG - chr4_1:6980894-6980913 Msa0532660:intron 15.0%
!!! ATTCAAAGAATTTTTTTTTG+GGG + chr4_1:6982301-6982320 None:intergenic 15.0%
!!! TATCAAAATGTTATTTCAAA+GGG + chr4_1:6982781-6982800 None:intergenic 15.0%
!!! AAAAAAATGTTTGATTTTCA+AGG + chr4_1:6983058-6983077 None:intergenic 15.0%
!!! TAAAAACAAGTGATTATTTT+TGG + chr4_1:6984081-6984100 None:intergenic 15.0%
!! GATAAAACAAATAAATTGAT+AGG - chr4_1:6984128-6984147 Msa0532660:intron 15.0%
!!! TAAAATGAGATTCTTTATTT+TGG + chr4_1:6984156-6984175 None:intergenic 15.0%
!!! ATTAAACATTTTCTATTACT+TGG + chr4_1:6984590-6984609 None:intergenic 15.0%
!! GTAATAGAAAATGTTTAATT+TGG - chr4_1:6984591-6984610 Msa0532660:intron 15.0%
!! TATGATATACTAATAAAGTA+TGG + chr4_1:6984779-6984798 None:intergenic 15.0%
!! ATTCAAGAAATAATAAATTG+AGG - chr4_1:6985317-6985336 Msa0532660:intron 15.0%
!!! TTGACTATATTATTGTTTTT+TGG - chr4_1:6987134-6987153 Msa0532660:intron 15.0%
!!! ATCACTTATTTTAATTGAAA+AGG + chr4_1:6987603-6987622 None:intergenic 15.0%
!!! TCTTTTAATCTTTTCCAATT+TGG - chr4_1:6979426-6979445 Msa0532660:three_prime_UTR 20.0%
!!! TTTAAGACATGTTTTTTCTT+TGG + chr4_1:6979567-6979586 None:intergenic 20.0%
!!! TTTCTATTTCTCTAAATTTC+TGG + chr4_1:6979603-6979622 None:intergenic 20.0%
!!! TCTTTTCTTATATTTTAGAC+CGG + chr4_1:6979638-6979657 None:intergenic 20.0%
!! TATTGAATCTTAAGAATTTG+AGG - chr4_1:6979732-6979751 Msa0532660:CDS 20.0%
!! AAAAAAAAATTGAAGGTCTT+GGG + chr4_1:6980233-6980252 None:intergenic 20.0%
!! CAAAGAGAAAAAAAAATTGA+AGG + chr4_1:6980240-6980259 None:intergenic 20.0%
!!! CTTCAATTTTTTTTTCTCTT+TGG - chr4_1:6980238-6980257 Msa0532660:intron 20.0%
!! AGTAGATTGATTATAATTGA+CGG + chr4_1:6980287-6980306 None:intergenic 20.0%
!! ATATAAATCATCTGAAAGTT+TGG + chr4_1:6980330-6980349 None:intergenic 20.0%
!! GAAATTATATATCACATTAG+AGG + chr4_1:6980774-6980793 None:intergenic 20.0%
!! AAAAAGTCTATGACTAAAAA+TGG + chr4_1:6981015-6981034 None:intergenic 20.0%
!!! GTTTTTTTTTCCTTTCTTAA+GGG + chr4_1:6981121-6981140 None:intergenic 20.0%
!! TTTATTGCTAGAAAATTAAG+GGG + chr4_1:6981202-6981221 None:intergenic 20.0%
!! GTTTATTGCTAGAAAATTAA+GGG + chr4_1:6981203-6981222 None:intergenic 20.0%
!!! AATTTTTAAATGGATTGGAA+CGG + chr4_1:6981383-6981402 None:intergenic 20.0%
!!! TATGCAATTTTTAAATGGAT+TGG + chr4_1:6981388-6981407 None:intergenic 20.0%
!!! TTTGGTATGCAATTTTTAAA+TGG + chr4_1:6981393-6981412 None:intergenic 20.0%
!! TTAATTGCCAAGATAAAATT+TGG - chr4_1:6981554-6981573 Msa0532660:CDS 20.0%
!!! AAAAAGTCCAAATTTTATCT+TGG + chr4_1:6981564-6981583 None:intergenic 20.0%
!!! AGATAAAATTTGGACTTTTT+AGG - chr4_1:6981564-6981583 Msa0532660:CDS 20.0%
!!! GATAAAATTTGGACTTTTTA+GGG - chr4_1:6981565-6981584 Msa0532660:CDS 20.0%
!! GGAGAAAGATAAATTAATTT+GGG + chr4_1:6981717-6981736 None:intergenic 20.0%
!! AGGAGAAAGATAAATTAATT+TGG + chr4_1:6981718-6981737 None:intergenic 20.0%
!!! GAGCAATATTGAAAATTTTA+AGG - chr4_1:6982187-6982206 Msa0532660:intron 20.0%
!!! ATCAAAATGTTATTTCAAAG+GGG + chr4_1:6982780-6982799 None:intergenic 20.0%
!!! GTATCAAAATGTTATTTCAA+AGG + chr4_1:6982782-6982801 None:intergenic 20.0%
!! ATCAAGTGGAAATAAAAAAA+GGG + chr4_1:6982885-6982904 None:intergenic 20.0%
!! ATTTATTAGAAAGTGGAATA+AGG - chr4_1:6983419-6983438 Msa0532660:intron 20.0%
!!! GATTATTTTTGGTTTCTTAT+AGG + chr4_1:6984070-6984089 None:intergenic 20.0%
!!! AACCATTTTTACATCTTAAT+AGG - chr4_1:6984493-6984512 Msa0532660:intron 20.0%
!! TTCCTATTAAGATGTAAAAA+TGG + chr4_1:6984498-6984517 None:intergenic 20.0%
!! ATTCTAATGTTAGTTAGTTA+TGG + chr4_1:6985271-6985290 None:intergenic 20.0%
!!! TTTCTTGAATGAAAATTTTG+TGG + chr4_1:6985307-6985326 None:intergenic 20.0%
!!! TATATGCAGAAAAGATTTTA+AGG - chr4_1:6985390-6985409 Msa0532660:intron 20.0%
!! AATGTATAAAACGAAATATC+AGG - chr4_1:6985558-6985577 Msa0532660:intron 20.0%
!! ATGTATAAAACGAAATATCA+GGG - chr4_1:6985559-6985578 Msa0532660:intron 20.0%
!!! AATTTTATTTATCTGTTTGC+AGG - chr4_1:6985765-6985784 Msa0532660:intron 20.0%
!!! TGTTTTCAAAATTGTTAATG+TGG - chr4_1:6986000-6986019 Msa0532660:intron 20.0%
!! TACACCATTTATTATCTAAT+TGG - chr4_1:6986383-6986402 Msa0532660:intron 20.0%
!! ACACCATTTATTATCTAATT+GGG - chr4_1:6986384-6986403 Msa0532660:intron 20.0%
!! AAACAATTTATGTCAAACAA+GGG + chr4_1:6986480-6986499 None:intergenic 20.0%
!! AAAACAATTTATGTCAAACA+AGG + chr4_1:6986481-6986500 None:intergenic 20.0%
!! CTACTAATTGTCATTAAAAA+AGG - chr4_1:6986826-6986845 Msa0532660:intron 20.0%
!! CTTGAACATAATAGAATTAT+TGG - chr4_1:6987328-6987347 Msa0532660:intron 20.0%
!! GCTTCACATTTTTATCATAA+AGG - chr4_1:6979376-6979395 Msa0532660:three_prime_UTR 25.0%
! AAAGATTAAAAGAACGAAGA+TGG + chr4_1:6979419-6979438 None:intergenic 25.0%
!!! TATGCTTTTGCTTTTTGTAA+CGG - chr4_1:6979494-6979513 Msa0532660:three_prime_UTR 25.0%
! AATTCCTAATGCTATAAGAT+TGG - chr4_1:6979541-6979560 Msa0532660:three_prime_UTR 25.0%
!!! ATAGAAAGTAATGCTTTTTC+CGG - chr4_1:6979616-6979635 Msa0532660:three_prime_UTR 25.0%
! AATATATATACCTGGTGTAT+GGG + chr4_1:6979843-6979862 None:intergenic 25.0%
! AAATATATATACCTGGTGTA+TGG + chr4_1:6979844-6979863 None:intergenic 25.0%
!! ATTTTTATAGCTGTATATGG+TGG + chr4_1:6979966-6979985 None:intergenic 25.0%
! GAAAAAAAAATTGAAGGTCT+TGG + chr4_1:6980234-6980253 None:intergenic 25.0%
!! TCTTTTCTTCAATATCTAAC+AGG + chr4_1:6980546-6980565 None:intergenic 25.0%
! TAATTGTTGTAATTGCATAC+AGG - chr4_1:6980652-6980671 Msa0532660:intron 25.0%
! AATTGTTGTAATTGCATACA+GGG - chr4_1:6980653-6980672 Msa0532660:intron 25.0%
! GACTAAAATGATTTGATCTA+CGG + chr4_1:6980820-6980839 None:intergenic 25.0%
!!! GGTTTTTTTTTCCTTTCTTA+AGG + chr4_1:6981122-6981141 None:intergenic 25.0%
! AATTATTCGTAAGACAAACA+AGG - chr4_1:6981175-6981194 Msa0532660:CDS 25.0%
! GGTTTATTGCTAGAAAATTA+AGG + chr4_1:6981204-6981223 None:intergenic 25.0%
!! TGCAACAATTTGGAAAATTT+TGG + chr4_1:6981311-6981330 None:intergenic 25.0%
!!! ATTTTTAAATGGATTGGAAC+GGG + chr4_1:6981382-6981401 None:intergenic 25.0%
! CTTGGAAAATTGGATAATAA+AGG - chr4_1:6981900-6981919 Msa0532660:intron 25.0%
! TTTGAAGAAGAAGAATACTT+GGG + chr4_1:6982270-6982289 None:intergenic 25.0%
! GGAAAAGAAAGAAAGAAAAT+TGG - chr4_1:6982358-6982377 Msa0532660:intron 25.0%
!!! GATTTTAATTGATTCGGTTT+CGG + chr4_1:6982392-6982411 None:intergenic 25.0%
!! ACTTTTCTTAAGTGTAAAGT+AGG + chr4_1:6982553-6982572 None:intergenic 25.0%
! TACTTTACACTTAAGAAAAG+TGG - chr4_1:6982552-6982571 Msa0532660:intron 25.0%
!! TTTCTAAAAGTAGCTTGATA+GGG + chr4_1:6982610-6982629 None:intergenic 25.0%
!!! TTTTCTAAAAGTAGCTTGAT+AGG + chr4_1:6982611-6982630 None:intergenic 25.0%
!!! TGAATTTTTTTGGTGTATGA+AGG + chr4_1:6982678-6982697 None:intergenic 25.0%
! ATAAAAAAAGGGCTTAAACA+AGG + chr4_1:6982874-6982893 None:intergenic 25.0%
! GATCAAGTGGAAATAAAAAA+AGG + chr4_1:6982886-6982905 None:intergenic 25.0%
!!! TTTGTGACAAATGGATTAAT+TGG + chr4_1:6982966-6982985 None:intergenic 25.0%
!!! TTTTGAAAAGGCATATGATA+TGG + chr4_1:6983031-6983050 None:intergenic 25.0%
!!! AAAATGTTTGATTTTCAAGG+TGG + chr4_1:6983055-6983074 None:intergenic 25.0%
! CATTATAAATCCTAACCAAT+CGG + chr4_1:6983153-6983172 None:intergenic 25.0%
!!! TCAATTCTTTAAAGCGATAA+GGG + chr4_1:6983386-6983405 None:intergenic 25.0%
!!! TTCAATTCTTTAAAGCGATA+AGG + chr4_1:6983387-6983406 None:intergenic 25.0%
!!! TTATCGCTTTAAAGAATTGA+AGG - chr4_1:6983386-6983405 Msa0532660:intron 25.0%
!! TAAAGAATTGAAGGTTCTAA+AGG - chr4_1:6983395-6983414 Msa0532660:intron 25.0%
!!! AAAGAATTGAAGGTTCTAAA+GGG - chr4_1:6983396-6983415 Msa0532660:intron 25.0%
! TAAAGGGATTTATTAGAAAG+TGG - chr4_1:6983412-6983431 Msa0532660:intron 25.0%
! AATCAAAATTCACCAATCTT+TGG - chr4_1:6983553-6983572 Msa0532660:intron 25.0%
! ATCAAAATTCACCAATCTTT+GGG - chr4_1:6983554-6983573 Msa0532660:intron 25.0%
! AACTCTAATTCATCCAAATT+AGG + chr4_1:6983807-6983826 None:intergenic 25.0%
! TTAGAGTTCCTTTCATTAAA+AGG - chr4_1:6983819-6983838 Msa0532660:intron 25.0%
! TAGAGTTCCTTTCATTAAAA+GGG - chr4_1:6983820-6983839 Msa0532660:intron 25.0%
!! AATTTAAAGCTAAATCCAAC+CGG + chr4_1:6983933-6983952 None:intergenic 25.0%
! TCGAATATGATTAACTAGAA+TGG - chr4_1:6984038-6984057 Msa0532660:intron 25.0%
! TGTAAAATTTACGAGAACAA+GGG + chr4_1:6984220-6984239 None:intergenic 25.0%
! ATGTAAAATTTACGAGAACA+AGG + chr4_1:6984221-6984240 None:intergenic 25.0%
!! TTGTAGTATTTTACATGAAG+TGG - chr4_1:6984288-6984307 Msa0532660:intron 25.0%
!!! TTAGAGTTTGTTAATGCATA+TGG + chr4_1:6984652-6984671 None:intergenic 25.0%
!!! ATATGTGACTCTTTTTCATT+GGG - chr4_1:6984861-6984880 Msa0532660:intron 25.0%
!! CTTTAGAGATGAAACTATAA+AGG - chr4_1:6985060-6985079 Msa0532660:intron 25.0%
! TAACTAACTAGTTAGTTAGT+TGG + chr4_1:6985205-6985224 None:intergenic 25.0%
! ATAAATCCAACTATGTTTGT+TGG + chr4_1:6985248-6985267 None:intergenic 25.0%
!!! AAAAGATTTTAAGGACTTTG+TGG - chr4_1:6985399-6985418 Msa0532660:intron 25.0%
!! ATTGGGTCATATGATTTTAT+TGG - chr4_1:6985887-6985906 Msa0532660:intron 25.0%
!! GAACAATTTTATTACTTGAG+AGG - chr4_1:6986129-6986148 Msa0532660:intron 25.0%
!!! ATGACTCTAGAACTTTTTAT+GGG - chr4_1:6986359-6986378 Msa0532660:intron 25.0%
!! GTTTGACATAAATTGTTTTC+TGG - chr4_1:6986482-6986501 Msa0532660:intron 25.0%
! AATAACTAAACAATATGTGC+AGG - chr4_1:6986604-6986623 Msa0532660:intron 25.0%
!! TTTTCTGTTATGATAATCGT+AGG + chr4_1:6986704-6986723 None:intergenic 25.0%
! ACGATTATCATAACAGAAAA+TGG - chr4_1:6986704-6986723 Msa0532660:intron 25.0%
! GTTTATTAGACACTGAAAAA+TGG + chr4_1:6986891-6986910 None:intergenic 25.0%
!! ATTATCTTTTATCTGCAATG+AGG - chr4_1:6987033-6987052 Msa0532660:intron 25.0%
!!! TTTTTTGGTTTTTTGTGTGA+AGG - chr4_1:6987149-6987168 Msa0532660:intron 25.0%
!! AACTTTGTTGATTATGACAA+TGG - chr4_1:6987259-6987278 Msa0532660:intron 25.0%
AAAACTGTCAGCATAAATAG+AGG + chr4_1:6979237-6979256 None:intergenic 30.0%
! CTTCATACTTTTGTCCAAAT+TGG + chr4_1:6979443-6979462 None:intergenic 30.0%
!! GTGTTGATAATGTAGTATGA+AGG - chr4_1:6979770-6979789 Msa0532660:CDS 30.0%
!!! CTTGCCTTAGGAATTTTTTT+TGG - chr4_1:6980029-6980048 Msa0532660:CDS 30.0%
ACCACCAAAAAAAATTCCTA+AGG + chr4_1:6980036-6980055 None:intergenic 30.0%
!!! TTAGGAATTTTTTTTGGTGG+TGG - chr4_1:6980035-6980054 Msa0532660:CDS 30.0%
GACAATGCATACTATATACA+AGG + chr4_1:6980080-6980099 None:intergenic 30.0%
! TAGATAATGAGAGAAGTACA+AGG - chr4_1:6981053-6981072 Msa0532660:CDS 30.0%
!!! TTGTACTTTTTCCGATTTGT+GGG + chr4_1:6981088-6981107 None:intergenic 30.0%
! ACAAATCGGAAAAAGTACAA+GGG - chr4_1:6981088-6981107 Msa0532660:CDS 30.0%
!! ACTTTGTATTGACTCTTGTT+GGG + chr4_1:6981143-6981162 None:intergenic 30.0%
!! AAATTTTGGAAGCTCAGAAT+GGG + chr4_1:6981297-6981316 None:intergenic 30.0%
!! AAAATTTTGGAAGCTCAGAA+TGG + chr4_1:6981298-6981317 None:intergenic 30.0%
CAATTTGACATGCAACAATT+TGG + chr4_1:6981321-6981340 None:intergenic 30.0%
TTGCATGTCAAATTGTTACA+AGG - chr4_1:6981326-6981345 Msa0532660:intron 30.0%
AAGGAGTGAAAGAATATTAC+CGG - chr4_1:6981345-6981364 Msa0532660:CDS 30.0%
!!! TTTTTAAATGGATTGGAACG+GGG + chr4_1:6981381-6981400 None:intergenic 30.0%
!!! TTTTGTAGATGTAGCTTTGT+TGG + chr4_1:6981421-6981440 None:intergenic 30.0%
AGCTCAAATTTATCTCGTAT+AGG + chr4_1:6981514-6981533 None:intergenic 30.0%
CGAGATAAATTTGAGCTAAT+AGG - chr4_1:6981517-6981536 Msa0532660:CDS 30.0%
TCTTTATATGTCAGTTTGAG+TGG + chr4_1:6981663-6981682 None:intergenic 30.0%
CTACTCTACTTGAGTTAAAA+AGG + chr4_1:6981738-6981757 None:intergenic 30.0%
AACAACAAGGTTAGCAAAAT+GGG + chr4_1:6981855-6981874 None:intergenic 30.0%
AGAAAAGAGTCTTGGAAAAT+TGG - chr4_1:6981890-6981909 Msa0532660:intron 30.0%
!! GAAGAAAGGTATTAGTAATG+GGG + chr4_1:6981967-6981986 None:intergenic 30.0%
!! CGAAGAAAGGTATTAGTAAT+GGG + chr4_1:6981968-6981987 None:intergenic 30.0%
!!! AAACTTCCAAGATTGGTTTT+GGG + chr4_1:6981997-6982016 None:intergenic 30.0%
!!! AAAACTTCCAAGATTGGTTT+TGG + chr4_1:6981998-6982017 None:intergenic 30.0%
! TCTCTAGAGAGAAAATTTGA+AGG - chr4_1:6982072-6982091 Msa0532660:intron 30.0%
! GTATTGATGGCAAAATATGT+TGG + chr4_1:6982111-6982130 None:intergenic 30.0%
TTTGTGGAAAGATGTATTGA+TGG + chr4_1:6982124-6982143 None:intergenic 30.0%
! CTTTGAAGAAGAAGAATACT+TGG + chr4_1:6982271-6982290 None:intergenic 30.0%
TAACAAAGTTTGGAAGTTGA+TGG + chr4_1:6982329-6982348 None:intergenic 30.0%
ATCAACTTCCAAACTTTGTT+AGG - chr4_1:6982328-6982347 Msa0532660:intron 30.0%
!!! GAGGGTGATTTTAATTGATT+CGG + chr4_1:6982398-6982417 None:intergenic 30.0%
! CTTTGGAAAAAAAGCTTGTT+GGG + chr4_1:6982450-6982469 None:intergenic 30.0%
! TTTTCCAAAGCATGTATTAC+CGG - chr4_1:6982460-6982479 Msa0532660:CDS 30.0%
! TTTCCATGTATCAAGACTTT+TGG - chr4_1:6982483-6982502 Msa0532660:CDS 30.0%
! TTCCATGTATCAAGACTTTT+GGG - chr4_1:6982484-6982503 Msa0532660:CDS 30.0%
TCAACCAAAGGTAAGTAAAA+GGG - chr4_1:6982521-6982540 Msa0532660:intron 30.0%
GTTGAAGACTCTTATAATTC+CGG + chr4_1:6982581-6982600 None:intergenic 30.0%
! TTCTAAAAGTAGCTTGATAG+GGG + chr4_1:6982609-6982628 None:intergenic 30.0%
! TAGATGGTTCCATTTGATTT+CGG + chr4_1:6982648-6982667 None:intergenic 30.0%
AAATCAAATGGAACCATCTA+AGG - chr4_1:6982648-6982667 Msa0532660:intron 30.0%
!!! AGGCTTGTGTTGAATTTTTT+TGG + chr4_1:6982688-6982707 None:intergenic 30.0%
TAAGGTTGAAAAATTGGATG+TGG + chr4_1:6982756-6982775 None:intergenic 30.0%
!! ATGTTATTTCAAAGGGGTTA+AGG + chr4_1:6982774-6982793 None:intergenic 30.0%
ACACCAAGAGAAAAAGAAAT+GGG - chr4_1:6982836-6982855 Msa0532660:intron 30.0%
!! TGTTTTTGCGGGAAATATTT+CGG + chr4_1:6982932-6982951 None:intergenic 30.0%
!! ATTAAAGCTTGTGTTTTTGC+GGG + chr4_1:6982943-6982962 None:intergenic 30.0%
!! GATTAAAGCTTGTGTTTTTG+CGG + chr4_1:6982944-6982963 None:intergenic 30.0%
!! TTTCAAGGTGGATTTTGAAA+AGG + chr4_1:6983043-6983062 None:intergenic 30.0%
! CGATTGGTTAGGATTTATAA+TGG - chr4_1:6983151-6983170 Msa0532660:intron 30.0%
AAATAAGAAGAGAAACCTCT+TGG - chr4_1:6983301-6983320 Msa0532660:intron 30.0%
!! CAATTCTTTAAAGCGATAAG+GGG + chr4_1:6983385-6983404 None:intergenic 30.0%
TATTAGAAAGTGGAATAAGG+AGG - chr4_1:6983422-6983441 Msa0532660:intron 30.0%
GAAAATCAAAGGGTTAATTG+TGG - chr4_1:6983464-6983483 Msa0532660:intron 30.0%
ATGTGAAGAATAAAGCCTTT+CGG - chr4_1:6983509-6983528 Msa0532660:intron 30.0%
TCAAAATTCACCAATCTTTG+GGG - chr4_1:6983555-6983574 Msa0532660:intron 30.0%
! TTTTCCATGCCATTAATCAT+AGG - chr4_1:6983658-6983677 Msa0532660:intron 30.0%
TTTGAGAGCTAAGATTGTAT+TGG + chr4_1:6983691-6983710 None:intergenic 30.0%
! ACAATCTTAGCTCTCAAAAT+TGG - chr4_1:6983693-6983712 Msa0532660:intron 30.0%
! AACTTTTCTCTTATGTTCAC+TGG - chr4_1:6983775-6983794 Msa0532660:intron 30.0%
! ACTTTTCTCTTATGTTCACT+GGG - chr4_1:6983776-6983795 Msa0532660:intron 30.0%
AGAGTTCCTTTCATTAAAAG+GGG - chr4_1:6983821-6983840 Msa0532660:intron 30.0%
ACAAAATTATATCTCTCGCA+TGG + chr4_1:6984272-6984291 None:intergenic 30.0%
GTAACATTATATCTCTTGCA+TGG + chr4_1:6984392-6984411 None:intergenic 30.0%
AACTCTAACAAATATGCAGA+AGG - chr4_1:6984664-6984683 Msa0532660:intron 30.0%
TGTAAAATCTAATTCCGTCT+GGG + chr4_1:6984711-6984730 None:intergenic 30.0%
TTGTAAAATCTAATTCCGTC+TGG + chr4_1:6984712-6984731 None:intergenic 30.0%
ATCGATGAGCTACTTAATAA+TGG - chr4_1:6984739-6984758 Msa0532660:intron 30.0%
ATTGATGGAATTATTGATCC+AGG - chr4_1:6984829-6984848 Msa0532660:intron 30.0%
CAATGAAAAAGAGTCACATA+TGG + chr4_1:6984862-6984881 None:intergenic 30.0%
!! CATATGTGACTCTTTTTCAT+TGG - chr4_1:6984860-6984879 Msa0532660:intron 30.0%
ATAATCATCTTGTAAGGCTT+GGG + chr4_1:6984893-6984912 None:intergenic 30.0%
! CGAGAAAGATTAGAATGTTT+TGG - chr4_1:6984986-6985005 Msa0532660:intron 30.0%
TTTATACAACCACTAACAAC+AGG - chr4_1:6985788-6985807 Msa0532660:intron 30.0%
!! AGCAATCTAAGAGTCTTATT+GGG - chr4_1:6985870-6985889 Msa0532660:intron 30.0%
!! ATTGTTAATGTGGCTTTATC+AGG - chr4_1:6986010-6986029 Msa0532660:intron 30.0%
! GTTGGTAGAAATATCATTGA+GGG + chr4_1:6986329-6986348 None:intergenic 30.0%
!!! CATGACTCTAGAACTTTTTA+TGG - chr4_1:6986358-6986377 Msa0532660:intron 30.0%
AGGCCCAATTAGATAATAAA+TGG + chr4_1:6986390-6986409 None:intergenic 30.0%
! ATAAACGTGATTTTGTCCAT+TGG + chr4_1:6986427-6986446 None:intergenic 30.0%
ATGACAGATGTGAATAAAGA+AGG - chr4_1:6986513-6986532 Msa0532660:intron 30.0%
TGACAGATGTGAATAAAGAA+GGG - chr4_1:6986514-6986533 Msa0532660:intron 30.0%
AATAAAGAAGGGACATACAT+TGG - chr4_1:6986525-6986544 Msa0532660:intron 30.0%
ATGTAAAAGGATACTTTGCA+TGG - chr4_1:6987182-6987201 Msa0532660:CDS 30.0%
! AGAAGAAGAAACTAGAGTTT+TGG + chr4_1:6987507-6987526 None:intergenic 30.0%
TTCTTCTTCACCAATAAAGA+GGG - chr4_1:6987520-6987539 Msa0532660:intron 30.0%
AAAGAGAAAAACGAGATACA+GGG + chr4_1:6987580-6987599 None:intergenic 30.0%
GCATAAATAGAGGCAATAAC+AGG + chr4_1:6979227-6979246 None:intergenic 35.0%
!!! CTGACAGTTTTGAGCTAAAT+CGG - chr4_1:6979246-6979265 Msa0532660:three_prime_UTR 35.0%
!!! TTTCCGGAAGGTTTTGTTTT+TGG - chr4_1:6979275-6979294 Msa0532660:three_prime_UTR 35.0%
GTACCAAAAACAAAACCTTC+CGG + chr4_1:6979281-6979300 None:intergenic 35.0%
!!! GAAGGTTTTGTTTTTGGTAC+TGG - chr4_1:6979281-6979300 Msa0532660:three_prime_UTR 35.0%
TACAAAACGTACCTGGTAAT+TGG + chr4_1:6979312-6979331 None:intergenic 35.0%
ACAATGTTACAAAACGTACC+TGG + chr4_1:6979319-6979338 None:intergenic 35.0%
TGTGTATGTTACTATGCATG+TGG - chr4_1:6979336-6979355 Msa0532660:three_prime_UTR 35.0%
TTGGCCAATCTTATAGCATT+AGG + chr4_1:6979548-6979567 None:intergenic 35.0%
! CTATCCACTATCTAGGTTTT+TGG + chr4_1:6979905-6979924 None:intergenic 35.0%
!! CAAAAACCTAGATAGTGGAT+AGG - chr4_1:6979903-6979922 Msa0532660:intron 35.0%
! AGCTGTATATGGTGGTTTTT+AGG + chr4_1:6979958-6979977 None:intergenic 35.0%
TTCATGTAGCTTTCTCTATG+TGG + chr4_1:6980004-6980023 None:intergenic 35.0%
ACATGAACATATCTTGCCTT+AGG - chr4_1:6980017-6980036 Msa0532660:CDS 35.0%
!!! GCCTTAGGAATTTTTTTTGG+TGG - chr4_1:6980032-6980051 Msa0532660:CDS 35.0%
!!! GAATTTTTTTTGGTGGTGGT+CGG - chr4_1:6980039-6980058 Msa0532660:CDS 35.0%
CATACTATATACAAGGTCTG+GGG + chr4_1:6980073-6980092 None:intergenic 35.0%
GCATACTATATACAAGGTCT+GGG + chr4_1:6980074-6980093 None:intergenic 35.0%
TGCATACTATATACAAGGTC+TGG + chr4_1:6980075-6980094 None:intergenic 35.0%
ACGGTATGAGTAGTTCAATA+GGG + chr4_1:6980268-6980287 None:intergenic 35.0%
! AGAGTTTCTAGACAAGTCAT+AGG - chr4_1:6980384-6980403 Msa0532660:intron 35.0%
TGATCACTATCATCGCTATA+AGG - chr4_1:6980711-6980730 Msa0532660:intron 35.0%
! GGAGTATTTAACCCACAAAT+CGG - chr4_1:6981074-6981093 Msa0532660:CDS 35.0%
!!! CTTGTACTTTTTCCGATTTG+TGG + chr4_1:6981089-6981108 None:intergenic 35.0%
! CACAAATCGGAAAAAGTACA+AGG - chr4_1:6981087-6981106 Msa0532660:CDS 35.0%
!! GACTTTGTATTGACTCTTGT+TGG + chr4_1:6981144-6981163 None:intergenic 35.0%
AAGAGTCAATACAAAGTCGA+GGG - chr4_1:6981146-6981165 Msa0532660:CDS 35.0%
!! TTCTTCTAAAATTTGGGAGC+CGG + chr4_1:6981266-6981285 None:intergenic 35.0%
!! AATTTTGGAAGCTCAGAATG+GGG + chr4_1:6981296-6981315 None:intergenic 35.0%
AGGAGTGAAAGAATATTACC+GGG - chr4_1:6981346-6981365 Msa0532660:CDS 35.0%
AAGGGAAGAACAATTGTTTG+GGG + chr4_1:6981777-6981796 None:intergenic 35.0%
GAAGGGAAGAACAATTGTTT+GGG + chr4_1:6981778-6981797 None:intergenic 35.0%
GAACAACAAGGTTAGCAAAA+TGG + chr4_1:6981856-6981875 None:intergenic 35.0%
!!! AACCTTGTTGTTCTTTTGAG+TGG - chr4_1:6981863-6981882 Msa0532660:intron 35.0%
ATCCACTCAAAAGAACAACA+AGG + chr4_1:6981868-6981887 None:intergenic 35.0%
GTGGATAAAGAAAAGAGTCT+TGG - chr4_1:6981882-6981901 Msa0532660:intron 35.0%
!! GCGAAGAAAGGTATTAGTAA+TGG + chr4_1:6981969-6981988 None:intergenic 35.0%
! TAAGTGATGACATCGTTTTG+TGG + chr4_1:6982140-6982159 None:intergenic 35.0%
ATTTGTAGACCAAAGGATGA+GGG + chr4_1:6982232-6982251 None:intergenic 35.0%
AATTTGTAGACCAAAGGATG+AGG + chr4_1:6982233-6982252 None:intergenic 35.0%
CAAACTTTGTTAGGCATCTT+GGG - chr4_1:6982337-6982356 Msa0532660:intron 35.0%
!! GCTTTGGAAAAAAAGCTTGT+TGG + chr4_1:6982451-6982470 None:intergenic 35.0%
AAGTCTTGATACATGGAAAC+CGG + chr4_1:6982482-6982501 None:intergenic 35.0%
ATCCCAAAAGTCTTGATACA+TGG + chr4_1:6982489-6982508 None:intergenic 35.0%
GTCAACCAAAGGTAAGTAAA+AGG - chr4_1:6982520-6982539 Msa0532660:intron 35.0%
! CTTTTAGACCCGAAATCAAA+TGG - chr4_1:6982636-6982655 Msa0532660:intron 35.0%
! AGATGGTTCCATTTGATTTC+GGG + chr4_1:6982647-6982666 None:intergenic 35.0%
! ACCAGTAAATAGAGCATCAT+CGG - chr4_1:6982709-6982728 Msa0532660:intron 35.0%
AGGGGTTAAGGTTGAAAAAT+TGG + chr4_1:6982762-6982781 None:intergenic 35.0%
! CATTTCTTTTTCTCTTGGTG+TGG + chr4_1:6982837-6982856 None:intergenic 35.0%
CACACCAAGAGAAAAAGAAA+TGG - chr4_1:6982835-6982854 Msa0532660:intron 35.0%
CACCAAGAGAAAAAGAAATG+GGG - chr4_1:6982837-6982856 Msa0532660:intron 35.0%
AGAAAAAGAAATGGGGCTAA+GGG - chr4_1:6982844-6982863 Msa0532660:intron 35.0%
TCTAGTTAACAATTTCCCAG+CGG + chr4_1:6982908-6982927 None:intergenic 35.0%
GATTTGGACTTTGTGACAAA+TGG + chr4_1:6982975-6982994 None:intergenic 35.0%
TTCTTGGAGTACATGATGTA+GGG + chr4_1:6982997-6983016 None:intergenic 35.0%
! TATGGTAAGTTGGAAGTTCT+TGG + chr4_1:6983013-6983032 None:intergenic 35.0%
AGGCATATGATATGGTAAGT+TGG + chr4_1:6983023-6983042 None:intergenic 35.0%
! TATAATGGAATCCATCACTG+CGG - chr4_1:6983166-6983185 Msa0532660:intron 35.0%
! CGAAAGTGTATATAAGCTAG+TGG + chr4_1:6983216-6983235 None:intergenic 35.0%
ACACTTTCGAGAAGAGAAAT+TGG - chr4_1:6983227-6983246 Msa0532660:intron 35.0%
TTTCGAGAAGAGAAATTGGT+CGG - chr4_1:6983231-6983250 Msa0532660:intron 35.0%
AAGTGGAATAAGGAGGTTTA+TGG - chr4_1:6983429-6983448 Msa0532660:intron 35.0%
AGTGGAATAAGGAGGTTTAT+GGG - chr4_1:6983430-6983449 Msa0532660:intron 35.0%
ATAAAGCCTTTCGGATAATG+AGG - chr4_1:6983518-6983537 Msa0532660:intron 35.0%
CACTACCTTTACTCTTCAAA+AGG + chr4_1:6983581-6983600 None:intergenic 35.0%
TCCAAAGAGCAAAAAGTAAG+TGG - chr4_1:6983607-6983626 Msa0532660:intron 35.0%
AGCAAAAAGTAAGTGGCTAA+AGG - chr4_1:6983614-6983633 Msa0532660:intron 35.0%
AAAAGTAAGTGGCTAAAGGA+AGG - chr4_1:6983618-6983637 Msa0532660:intron 35.0%
AAAGTAAGTGGCTAAAGGAA+GGG - chr4_1:6983619-6983638 Msa0532660:intron 35.0%
CTTTCCTATGATTAATGGCA+TGG + chr4_1:6983665-6983684 None:intergenic 35.0%
GGAAGCTTTCCTATGATTAA+TGG + chr4_1:6983670-6983689 None:intergenic 35.0%
CTCTCAAAATTGGTCATTCT+TGG - chr4_1:6983703-6983722 Msa0532660:intron 35.0%
! TTTGCTCCCCTTTTAATGAA+AGG + chr4_1:6983830-6983849 None:intergenic 35.0%
!! CATGAAGTGGACTTTTACAT+CGG - chr4_1:6984301-6984320 Msa0532660:intron 35.0%
CATACAGATTCTCCATATCT+TGG - chr4_1:6984552-6984571 Msa0532660:intron 35.0%
CTATTACTTGGCAATATCCT+TGG + chr4_1:6984578-6984597 None:intergenic 35.0%
TATGCAGAAGGAAAACTAAG+TGG - chr4_1:6984676-6984695 Msa0532660:intron 35.0%
ATGCAGAAGGAAAACTAAGT+GGG - chr4_1:6984677-6984696 Msa0532660:intron 35.0%
TATTAAGTAGCTCATCGATC+AGG + chr4_1:6984738-6984757 None:intergenic 35.0%
TAATCATCTTGTAAGGCTTG+GGG + chr4_1:6984892-6984911 None:intergenic 35.0%
CATAATCATCTTGTAAGGCT+TGG + chr4_1:6984894-6984913 None:intergenic 35.0%
CAAGCCTTACAAGATGATTA+TGG - chr4_1:6984892-6984911 Msa0532660:intron 35.0%
CTAGTTAGTTAGTTGGTTAG+TGG + chr4_1:6985198-6985217 None:intergenic 35.0%
! AACTATGTTTGTTGGTTGGT+TGG + chr4_1:6985240-6985259 None:intergenic 35.0%
AACCAACCAACAAACATAGT+TGG - chr4_1:6985239-6985258 Msa0532660:intron 35.0%
! ATCCAACTATGTTTGTTGGT+TGG + chr4_1:6985244-6985263 None:intergenic 35.0%
GATATTTGCTTCCTGGAATT+TGG - chr4_1:6985421-6985440 Msa0532660:intron 35.0%
TTACTTTGTCTCCAAATTCC+AGG + chr4_1:6985435-6985454 None:intergenic 35.0%
TTGGAGACAAAGTAAAGCAT+TGG - chr4_1:6985440-6985459 Msa0532660:intron 35.0%
! TGGAGACAAAGTAAAGCATT+GGG - chr4_1:6985441-6985460 Msa0532660:intron 35.0%
GTACTCAAAGTGTAAGAGAA+TGG + chr4_1:6985481-6985500 None:intergenic 35.0%
ACACTTTGAGTACATCAGAT+TGG - chr4_1:6985488-6985507 Msa0532660:intron 35.0%
ACGAAATATCAGGGTCAAAA+TGG - chr4_1:6985568-6985587 Msa0532660:intron 35.0%
CAAAATGGTGTAATAGGCAT+TGG - chr4_1:6985583-6985602 Msa0532660:intron 35.0%
CCATCCAAACATGAAATCAA+GGG + chr4_1:6985674-6985693 None:intergenic 35.0%
ACCATCCAAACATGAAATCA+AGG + chr4_1:6985675-6985694 None:intergenic 35.0%
! ATACGGTCACAATTTTGTCA+TGG + chr4_1:6985738-6985757 None:intergenic 35.0%
! GAGCAATCTAAGAGTCTTAT+TGG - chr4_1:6985869-6985888 Msa0532660:intron 35.0%
ACCACTCCTAATTGTTGAAA+AGG - chr4_1:6986049-6986068 Msa0532660:intron 35.0%
! TCCTTTTCAACAATTAGGAG+TGG + chr4_1:6986053-6986072 None:intergenic 35.0%
! CCTTCTCCTTTTCAACAATT+AGG + chr4_1:6986058-6986077 None:intergenic 35.0%
CCTAATTGTTGAAAAGGAGA+AGG - chr4_1:6986055-6986074 Msa0532660:intron 35.0%
GTTATAGTGAGAACTTTGTC+AGG - chr4_1:6986077-6986096 Msa0532660:intron 35.0%
GAGAACTTTGTCAGGAATTT+AGG - chr4_1:6986085-6986104 Msa0532660:intron 35.0%
AACTTTGTCAGGAATTTAGG+AGG - chr4_1:6986088-6986107 Msa0532660:intron 35.0%
! TCTCCTTTTTACAGTCTCTA+AGG - chr4_1:6986197-6986216 Msa0532660:intron 35.0%
! CTCCTTTTTACAGTCTCTAA+GGG - chr4_1:6986198-6986217 Msa0532660:intron 35.0%
!! GGTTGGTAGAAATATCATTG+AGG + chr4_1:6986330-6986349 None:intergenic 35.0%
!! TTCTAGAGTCATGTAGAACT+AGG + chr4_1:6986351-6986370 None:intergenic 35.0%
! TAGCACACATTGATTAGTGT+TGG + chr4_1:6986453-6986472 None:intergenic 35.0%
TTGGCTATATGTTTGTCCAA+AGG - chr4_1:6986634-6986653 Msa0532660:intron 35.0%
TGGCTATATGTTTGTCCAAA+GGG - chr4_1:6986635-6986654 Msa0532660:intron 35.0%
TTTCCTTTGTGTACAACAGT+AGG + chr4_1:6986670-6986689 None:intergenic 35.0%
CCATTCAAAGTTGTCCAAAA+GGG + chr4_1:6987209-6987228 None:intergenic 35.0%
TCCATTCAAAGTTGTCCAAA+AGG + chr4_1:6987210-6987229 None:intergenic 35.0%
GACAACTTTGAATGGAATGA+CGG - chr4_1:6987214-6987233 Msa0532660:CDS 35.0%
CAAAGCTCACACAGTATTAT+TGG + chr4_1:6987376-6987395 None:intergenic 35.0%
!! AGAAACTAGAGTTTTGGTGA+CGG + chr4_1:6987501-6987520 None:intergenic 35.0%
CTTCTTCTTCACCAATAAAG+AGG - chr4_1:6987519-6987538 Msa0532660:intron 35.0%
TCTTCTTCACCAATAAAGAG+GGG - chr4_1:6987521-6987540 Msa0532660:intron 35.0%
CTTAAATCACCCCTCTTTAT+TGG + chr4_1:6987533-6987552 None:intergenic 35.0%
CAATAAAGAGGGGTGATTTA+AGG - chr4_1:6987531-6987550 Msa0532660:intron 35.0%
GAAAGAGAAAAACGAGATAC+AGG + chr4_1:6987581-6987600 None:intergenic 35.0%
! GTCATTGATTGAATCTGCAT+TGG + chr4_1:6987770-6987789 None:intergenic 35.0%
AAAACGTACCTGGTAATTGG+AGG + chr4_1:6979309-6979328 None:intergenic 40.0%
AAAGAACGAAGATGGAGAGA+GGG + chr4_1:6979411-6979430 None:intergenic 40.0%
AAAAGAACGAAGATGGAGAG+AGG + chr4_1:6979412-6979431 None:intergenic 40.0%
GATATATTTGCCCATACACC+AGG - chr4_1:6979830-6979849 Msa0532660:CDS 40.0%
CTAGCCAAAAACCTAGATAG+TGG - chr4_1:6979898-6979917 Msa0532660:intron 40.0%
TTGTAGCCTATCCACTATCT+AGG + chr4_1:6979912-6979931 None:intergenic 40.0%
!! TATATGGTGGTTTTTAGGCG+TGG + chr4_1:6979953-6979972 None:intergenic 40.0%
! TGAGTTTAGCTCAGTTGGTA+TGG + chr4_1:6980102-6980121 None:intergenic 40.0%
TAAACTCACAAGGACGTCTT+AGG - chr4_1:6980114-6980133 Msa0532660:intron 40.0%
ACAACCATGTGAGTTTAGCT+CGG + chr4_1:6980154-6980173 None:intergenic 40.0%
CTAAACTCACATGGTTGTAG+TGG - chr4_1:6980156-6980175 Msa0532660:intron 40.0%
ATGGTTGTAGTGGTGTGATT+TGG - chr4_1:6980166-6980185 Msa0532660:intron 40.0%
! TTGTAGTGGTGTGATTTGGA+CGG - chr4_1:6980170-6980189 Msa0532660:intron 40.0%
GACGGTATGAGTAGTTCAAT+AGG + chr4_1:6980269-6980288 None:intergenic 40.0%
GTTGTAATTGCATACAGGGA+AGG - chr4_1:6980657-6980676 Msa0532660:intron 40.0%
ATTGCATACAGGGAAGGTAA+AGG - chr4_1:6980663-6980682 Msa0532660:intron 40.0%
CAAGAGTCAATACAAAGTCG+AGG - chr4_1:6981145-6981164 Msa0532660:CDS 40.0%
AGCAATAAACCATCTCCAAG+AGG - chr4_1:6981213-6981232 Msa0532660:CDS 40.0%
AAGTCATCAATGTCTCCTCT+TGG + chr4_1:6981231-6981250 None:intergenic 40.0%
ATGACTTCTACAATCTCCTC+CGG - chr4_1:6981244-6981263 Msa0532660:intron 40.0%
!! GTAGCTTTGTTGGAAGGATT+TGG + chr4_1:6981411-6981430 None:intergenic 40.0%
!! GTAGATGTAGCTTTGTTGGA+AGG + chr4_1:6981417-6981436 None:intergenic 40.0%
TTCACCATGAAGACGTTTGT+AGG - chr4_1:6981683-6981702 Msa0532660:intron 40.0%
TGAACCTACAAACGTCTTCA+TGG + chr4_1:6981690-6981709 None:intergenic 40.0%
TGAAGACGTTTGTAGGTTCA+AGG - chr4_1:6981690-6981709 Msa0532660:intron 40.0%
GGAAGGGAAGAACAATTGTT+TGG + chr4_1:6981779-6981798 None:intergenic 40.0%
TTGAATGGAGAAGGGATCTT+TGG + chr4_1:6981800-6981819 None:intergenic 40.0%
TTGGGACTTTGAATGGAGAA+GGG + chr4_1:6981808-6981827 None:intergenic 40.0%
GGTTAGCAAAATGGGTCTAT+GGG + chr4_1:6981847-6981866 None:intergenic 40.0%
AGGTTAGCAAAATGGGTCTA+TGG + chr4_1:6981848-6981867 None:intergenic 40.0%
TGGGCATGATATTTGGATAG+CGG + chr4_1:6981931-6981950 None:intergenic 40.0%
CGTTCTTTGGGCATGATATT+TGG + chr4_1:6981938-6981957 None:intergenic 40.0%
!! TTTTGGGAGTTTGCGAAGAA+AGG + chr4_1:6981981-6982000 None:intergenic 40.0%
CAAACTCCCAAAACCAATCT+TGG - chr4_1:6981988-6982007 Msa0532660:intron 40.0%
GGTTGGAAAACTTCCAAGAT+TGG + chr4_1:6982004-6982023 None:intergenic 40.0%
ATTCATGTGGCTTAGGAAAG+AGG + chr4_1:6982025-6982044 None:intergenic 40.0%
TAGAAGGATTCATGTGGCTT+AGG + chr4_1:6982032-6982051 None:intergenic 40.0%
TAAGCCACATGAATCCTTCT+AGG - chr4_1:6982031-6982050 Msa0532660:intron 40.0%
AAGCCACATGAATCCTTCTA+GGG - chr4_1:6982032-6982051 Msa0532660:intron 40.0%
TTCAAACATCCATCCCTAGA+AGG + chr4_1:6982048-6982067 None:intergenic 40.0%
ATATTGCTCCTCTTGCAAAG+TGG + chr4_1:6982176-6982195 None:intergenic 40.0%
TTTGTAGACCAAAGGATGAG+GGG + chr4_1:6982231-6982250 None:intergenic 40.0%
GGAGTCAATTTGTAGACCAA+AGG + chr4_1:6982239-6982258 None:intergenic 40.0%
AAGAATACTTGGGTGAGTTG+GGG + chr4_1:6982260-6982279 None:intergenic 40.0%
GAAGAATACTTGGGTGAGTT+GGG + chr4_1:6982261-6982280 None:intergenic 40.0%
AGAAGAATACTTGGGTGAGT+TGG + chr4_1:6982262-6982281 None:intergenic 40.0%
CCAAGATGCCTAACAAAGTT+TGG + chr4_1:6982339-6982358 None:intergenic 40.0%
CCAAACTTTGTTAGGCATCT+TGG - chr4_1:6982336-6982355 Msa0532660:intron 40.0%
!! AAAAAAAGCTTGTTGGGTGG+AGG + chr4_1:6982444-6982463 None:intergenic 40.0%
!! TGGAAAAAAAGCTTGTTGGG+TGG + chr4_1:6982447-6982466 None:intergenic 40.0%
GAAACCGGTAATACATGCTT+TGG + chr4_1:6982467-6982486 None:intergenic 40.0%
TTTCTCCAACTGTCAACCAA+AGG - chr4_1:6982509-6982528 Msa0532660:intron 40.0%
ACTTACCTTTGGTTGACAGT+TGG + chr4_1:6982517-6982536 None:intergenic 40.0%
! CTCTCCCTTTTACTTACCTT+TGG + chr4_1:6982528-6982547 None:intergenic 40.0%
CACTTAAGAAAAGTGGATGC+CGG - chr4_1:6982559-6982578 Msa0532660:intron 40.0%
GTATGAAGGCTATCCTTAGA+TGG + chr4_1:6982664-6982683 None:intergenic 40.0%
TGATGCTCTATTTACTGGTG+AGG + chr4_1:6982708-6982727 None:intergenic 40.0%
!! TTCTTTTTCTCTTGGTGTGG+CGG + chr4_1:6982834-6982853 None:intergenic 40.0%
! AGCCCCATTTCTTTTTCTCT+TGG + chr4_1:6982842-6982861 None:intergenic 40.0%
GAGAAAAAGAAATGGGGCTA+AGG - chr4_1:6982843-6982862 Msa0532660:intron 40.0%
GAAAAAGAAATGGGGCTAAG+GGG - chr4_1:6982845-6982864 Msa0532660:intron 40.0%
TTTATTTCCACTTGATCCGC+TGG - chr4_1:6982889-6982908 Msa0532660:intron 40.0%
TTATTTCCACTTGATCCGCT+GGG - chr4_1:6982890-6982909 Msa0532660:intron 40.0%
GAGTACATGATGTAGGGATT+TGG + chr4_1:6982991-6983010 None:intergenic 40.0%
GTTCTTGGAGTACATGATGT+AGG + chr4_1:6982998-6983017 None:intergenic 40.0%
! AATCGGCTTTCCATAAAGGA+AGG + chr4_1:6983136-6983155 None:intergenic 40.0%
TTCCTTTATGGAAAGCCGAT+TGG - chr4_1:6983135-6983154 Msa0532660:intron 40.0%
! AACCAATCGGCTTTCCATAA+AGG + chr4_1:6983140-6983159 None:intergenic 40.0%
! TTATGGAAAGCCGATTGGTT+AGG - chr4_1:6983140-6983159 Msa0532660:intron 40.0%
! TAATCGGGTTGCAAGAACTT+TGG - chr4_1:6983190-6983209 Msa0532660:intron 40.0%
CATCGAAGTTCTTCGAACTA+CGG - chr4_1:6983273-6983292 Msa0532660:intron 40.0%
AAGAAGAGAAACCTCTTGGA+AGG - chr4_1:6983305-6983324 Msa0532660:intron 40.0%
!! TTGGAAGGCACTCATTATGA+TGG - chr4_1:6983320-6983339 Msa0532660:intron 40.0%
!! GATAAGGGGTATTCTGAAGT+CGG + chr4_1:6983371-6983390 None:intergenic 40.0%
GTGGAATAAGGAGGTTTATG+GGG - chr4_1:6983431-6983450 Msa0532660:intron 40.0%
AGGTGGAGGAGAAAATCAAA+GGG - chr4_1:6983454-6983473 Msa0532660:intron 40.0%
AGGGTTAATTGTGGAGATTG+CGG - chr4_1:6983473-6983492 Msa0532660:intron 40.0%
!!! GCCACTTACTTTTTGCTCTT+TGG + chr4_1:6983611-6983630 None:intergenic 40.0%
AAGTAAGTGGCTAAAGGAAG+GGG - chr4_1:6983620-6983639 Msa0532660:intron 40.0%
AAAGGAAGGGGATTCAAACT+CGG - chr4_1:6983632-6983651 Msa0532660:intron 40.0%
GAAGTGATTAGAAGCTCCAA+AGG - chr4_1:6983891-6983910 Msa0532660:intron 40.0%
CAATATCCTTGGCCAAGATA+TGG + chr4_1:6984567-6984586 None:intergenic 40.0%
TGCAGAAGGAAAACTAAGTG+GGG - chr4_1:6984678-6984697 Msa0532660:intron 40.0%
GTCACATATGGTATTTGACC+TGG + chr4_1:6984850-6984869 None:intergenic 40.0%
GCCTTACAAGATGATTATGG+AGG - chr4_1:6984895-6984914 Msa0532660:intron 40.0%
GCCTCCATAATCATCTTGTA+AGG + chr4_1:6984899-6984918 None:intergenic 40.0%
GCTTTGTCAGCGAGAATATT+AGG - chr4_1:6984917-6984936 Msa0532660:intron 40.0%
!! ATCTCTAAAGTGTGAGTGTG+TGG + chr4_1:6985050-6985069 None:intergenic 40.0%
! ATGTTTGTTGGTTGGTTGGT+TGG + chr4_1:6985236-6985255 None:intergenic 40.0%
CTTTGTGGATATTTGCTTCC+TGG - chr4_1:6985414-6985433 Msa0532660:intron 40.0%
CAGGGTCAAAATGGTGTAAT+AGG - chr4_1:6985577-6985596 Msa0532660:intron 40.0%
GCATTGGATTAAACTCTCAC+TGG - chr4_1:6985599-6985618 Msa0532660:intron 40.0%
! TCTAATGGGTCAGTTGAGTA+TGG + chr4_1:6985631-6985650 None:intergenic 40.0%
! CGACGGCTTTTTGATCTAAT+GGG + chr4_1:6985645-6985664 None:intergenic 40.0%
! TCGACGGCTTTTTGATCTAA+TGG + chr4_1:6985646-6985665 None:intergenic 40.0%
CCCTTGATTTCATGTTTGGA+TGG - chr4_1:6985671-6985690 Msa0532660:intron 40.0%
GTCCATGGTTGTTGTAGAAA+CGG + chr4_1:6985716-6985735 None:intergenic 40.0%
! CACAATTTTGTCATGGTCCA+TGG + chr4_1:6985731-6985750 None:intergenic 40.0%
GATTGCTCTTGAGTGAACTT+TGG + chr4_1:6985857-6985876 None:intergenic 40.0%
GAAAACACTATTAACGCCGT+CGG + chr4_1:6985987-6986006 None:intergenic 40.0%
ACAATTAGGAGTGGTGAGAA+AGG + chr4_1:6986044-6986063 None:intergenic 40.0%
CTCCCTTAGAGACTGTAAAA+AGG + chr4_1:6986203-6986222 None:intergenic 40.0%
AGAGATCTAGACACATCCTA+GGG - chr4_1:6986221-6986240 Msa0532660:intron 40.0%
AGTGTGTAGAGAGTTATCCT+AGG + chr4_1:6986263-6986282 None:intergenic 40.0%
AGAGTCATGTAGAACTAGGT+TGG + chr4_1:6986347-6986366 None:intergenic 40.0%
CATTGGACTAATCGAGTGTT+AGG + chr4_1:6986410-6986429 None:intergenic 40.0%
! CTAACACTCGATTAGTCCAA+TGG - chr4_1:6986408-6986427 Msa0532660:intron 40.0%
GGCTATATGTTTGTCCAAAG+GGG - chr4_1:6986636-6986655 Msa0532660:intron 40.0%
!!! TGGTTTTTTGTGTGAAGGCA+AGG - chr4_1:6987154-6987173 Msa0532660:intron 40.0%
AGGCAAGGTGTGAATGTAAA+AGG - chr4_1:6987169-6987188 Msa0532660:intron 40.0%
! ATACTTTGCATGGTCCCTTT+TGG - chr4_1:6987192-6987211 Msa0532660:CDS 40.0%
! CCCTTTTGGACAACTTTGAA+TGG - chr4_1:6987206-6987225 Msa0532660:CDS 40.0%
AAGAAACTTCCTAAACCACC+GGG + chr4_1:6987311-6987330 None:intergenic 40.0%
CAAGAAACTTCCTAAACCAC+CGG + chr4_1:6987312-6987331 None:intergenic 40.0%
AGCTCACACAGTATTATTGG+TGG + chr4_1:6987373-6987392 None:intergenic 40.0%
! GCTAAATCGGAGCAGTTTTC+CGG - chr4_1:6979259-6979278 Msa0532660:three_prime_UTR 45.0%
!! GAAGGTGCTGTACATGAAGA+CGG - chr4_1:6979788-6979807 Msa0532660:CDS 45.0%
CATGAAGACGGAAGAGGAAT+TGG - chr4_1:6979800-6979819 Msa0532660:CDS 45.0%
ACGGAAGAGGAATTGGTACA+TGG - chr4_1:6979807-6979826 Msa0532660:CDS 45.0%
CGGAAGAGGAATTGGTACAT+GGG - chr4_1:6979808-6979827 Msa0532660:CDS 45.0%
! AGGCGTGGTCATGATTTGTA+AGG + chr4_1:6979938-6979957 None:intergenic 45.0%
! CCTTGTGAGTTTAGCTCAGT+TGG + chr4_1:6980107-6980126 None:intergenic 45.0%
CCAACTGAGCTAAACTCACA+AGG - chr4_1:6980104-6980123 Msa0532660:intron 45.0%
AACTCTAATGCCACTCTACG+TGG - chr4_1:6980593-6980612 Msa0532660:intron 45.0%
CATACAGGGAAGGTAAAGGA+TGG - chr4_1:6980667-6980686 Msa0532660:intron 45.0%
GGGATACTCACCCTTAAGAA+AGG - chr4_1:6981108-6981127 Msa0532660:CDS 45.0%
TCAATGTCTCCTCTTGGAGA+TGG + chr4_1:6981225-6981244 None:intergenic 45.0%
!! TTCTAAAATTTGGGAGCCGG+AGG + chr4_1:6981263-6981282 None:intergenic 45.0%
TTCGAATTGTGTGTGGTGCT+CGG + chr4_1:6981470-6981489 None:intergenic 45.0%
GTGTGACTTCGAATTGTGTG+TGG + chr4_1:6981477-6981496 None:intergenic 45.0%
CAATTCGAAGTCACACCAAC+TGG - chr4_1:6981481-6981500 Msa0532660:CDS 45.0%
!! AAGGGGAATCTGGACTAGTT+TGG + chr4_1:6981593-6981612 None:intergenic 45.0%
TTAAGTGCGGCACTAGAAGA+GGG + chr4_1:6981618-6981637 None:intergenic 45.0%
TTTAAGTGCGGCACTAGAAG+AGG + chr4_1:6981619-6981638 None:intergenic 45.0%
GAGTGGTGAAATTCTTCCTC+CGG + chr4_1:6981646-6981665 None:intergenic 45.0%
! TGGAGAAGGGATCTTTGGAA+GGG + chr4_1:6981795-6981814 None:intergenic 45.0%
ATGGAGAAGGGATCTTTGGA+AGG + chr4_1:6981796-6981815 None:intergenic 45.0%
GTTGGGACTTTGAATGGAGA+AGG + chr4_1:6981809-6981828 None:intergenic 45.0%
!! GTCTATGGGTTGATGAAGAG+TGG + chr4_1:6981833-6981852 None:intergenic 45.0%
GGGCATGATATTTGGATAGC+GGG + chr4_1:6981930-6981949 None:intergenic 45.0%
ATGGGGAAGCAACGTTCTTT+GGG + chr4_1:6981950-6981969 None:intergenic 45.0%
AATGGGGAAGCAACGTTCTT+TGG + chr4_1:6981951-6981970 None:intergenic 45.0%
ATGTGGCTTAGGAAAGAGGT+TGG + chr4_1:6982021-6982040 None:intergenic 45.0%
CATCCCTAGAAGGATTCATG+TGG + chr4_1:6982038-6982057 None:intergenic 45.0%
! CACATGAATCCTTCTAGGGA+TGG - chr4_1:6982036-6982055 Msa0532660:intron 45.0%
CACCATTTCCACTTTGCAAG+AGG - chr4_1:6982165-6982184 Msa0532660:intron 45.0%
CTCCTCTTGCAAAGTGGAAA+TGG + chr4_1:6982170-6982189 None:intergenic 45.0%
TTGTAGACCAAAGGATGAGG+GGG + chr4_1:6982230-6982249 None:intergenic 45.0%
!! ATCGGTTTGTGAGTCTTGGT+GGG + chr4_1:6982420-6982439 None:intergenic 45.0%
!! AATCGGTTTGTGAGTCTTGG+TGG + chr4_1:6982421-6982440 None:intergenic 45.0%
!! AGGAATCGGTTTGTGAGTCT+TGG + chr4_1:6982424-6982443 None:intergenic 45.0%
GCCGATGATGCTCTATTTAC+TGG + chr4_1:6982713-6982732 None:intergenic 45.0%
AATCCATCACTGCGGCTAAT+CGG - chr4_1:6983174-6983193 Msa0532660:intron 45.0%
ACTTCGATGCTCACTCTCAT+CGG + chr4_1:6983262-6983281 None:intergenic 45.0%
CATAATGAGTGCCTTCCAAG+AGG + chr4_1:6983319-6983338 None:intergenic 45.0%
GAATAAGGAGGTTTATGGGG+AGG - chr4_1:6983434-6983453 Msa0532660:intron 45.0%
GAGGTGGAGGAGAAAATCAA+AGG - chr4_1:6983453-6983472 Msa0532660:intron 45.0%
AATTGTGGAGATTGCGGATG+TGG - chr4_1:6983479-6983498 Msa0532660:intron 45.0%
CCTCTACCTCATTATCCGAA+AGG + chr4_1:6983527-6983546 None:intergenic 45.0%
CCTTTCGGATAATGAGGTAG+AGG - chr4_1:6983524-6983543 Msa0532660:intron 45.0%
CGGATAATGAGGTAGAGGTT+TGG - chr4_1:6983529-6983548 Msa0532660:intron 45.0%
CTTCAAAAGGCCCCAAAGAT+TGG + chr4_1:6983568-6983587 None:intergenic 45.0%
!! TGGGGCCTTTTGAAGAGTAA+AGG - chr4_1:6983573-6983592 Msa0532660:intron 45.0%
GTCTTAAAGCAGACGGATGA+TGG + chr4_1:6983731-6983750 None:intergenic 45.0%
!! TCCGTCTGCTTTAAGACATG+CGG - chr4_1:6983734-6983753 Msa0532660:intron 45.0%
ACCGCATGTCTTAAAGCAGA+CGG + chr4_1:6983738-6983757 None:intergenic 45.0%
TCACTGGGACATGCCTAATT+TGG - chr4_1:6983791-6983810 Msa0532660:intron 45.0%
AGGGGAGCAAAATGAGTCTT+TGG - chr4_1:6983839-6983858 Msa0532660:intron 45.0%
CTCCAAAGGCAACAAAAGTC+CGG - chr4_1:6983905-6983924 Msa0532660:intron 45.0%
TCCAAAGGCAACAAAAGTCC+GGG - chr4_1:6983906-6983925 Msa0532660:intron 45.0%
GATTCTCCATATCTTGGCCA+AGG - chr4_1:6984558-6984577 Msa0532660:intron 45.0%
GCAGAAGGAAAACTAAGTGG+GGG - chr4_1:6984679-6984698 Msa0532660:intron 45.0%
! GAAGTTGGTTGTGTGTTGAC+TGG + chr4_1:6985516-6985535 None:intergenic 45.0%
CATCTGCATGAGCAAGAAGT+TGG + chr4_1:6985531-6985550 None:intergenic 45.0%
GACGCCCTTGATTTCATGTT+TGG - chr4_1:6985667-6985686 Msa0532660:intron 45.0%
GACCGTTTCTACAACAACCA+TGG - chr4_1:6985711-6985730 Msa0532660:intron 45.0%
GGATACTCTCCTGTTGTTAG+TGG + chr4_1:6985800-6985819 None:intergenic 45.0%
ACATAAGACACCATGCTTGC+TGG + chr4_1:6985821-6985840 None:intergenic 45.0%
AGCAAGCATGGTGTCTTATG+TGG - chr4_1:6985820-6985839 Msa0532660:intron 45.0%
GCAAGCATGGTGTCTTATGT+GGG - chr4_1:6985821-6985840 Msa0532660:intron 45.0%
! GGGAATTGGTTTCGTTGCAT+TGG + chr4_1:6985942-6985961 None:intergenic 45.0%
AATTCCCCTACATTCTGCAG+CGG - chr4_1:6985955-6985974 Msa0532660:intron 45.0%
GAGAGATCTAGACACATCCT+AGG - chr4_1:6986220-6986239 Msa0532660:intron 45.0%
! ATGTGTCTAGAACTCTCCCT+AGG + chr4_1:6986240-6986259 None:intergenic 45.0%
!! GAGAGTTCTAGACACATCCT+AGG - chr4_1:6986243-6986262 Msa0532660:intron 45.0%
AAGGGACATACATTGGAGCA+TGG - chr4_1:6986532-6986551 Msa0532660:intron 45.0%
AGGGACATACATTGGAGCAT+GGG - chr4_1:6986533-6986552 Msa0532660:intron 45.0%
AATATGTGCAGGCTGCAACT+TGG - chr4_1:6986615-6986634 Msa0532660:intron 45.0%
TGTTTGTCCAAAGGGGATTC+AGG - chr4_1:6986643-6986662 Msa0532660:intron 45.0%
GGACCTACTGTTGTACACAA+AGG - chr4_1:6986664-6986683 Msa0532660:intron 45.0%
TCCAACACTATCACTCGAAG+AGG - chr4_1:6986965-6986984 Msa0532660:intron 45.0%
! CGAGATACAGGGTGTGATTT+TGG + chr4_1:6987569-6987588 None:intergenic 45.0%
GTGTGTTTGTCGTCTTTGTG+TGG - chr4_1:6987679-6987698 Msa0532660:intron 45.0%
! TTGCCTTTCTTGTTTCGCTC+AGG - chr4_1:6987708-6987727 Msa0532660:CDS 45.0%
AGACCTGAGCGAAACAAGAA+AGG + chr4_1:6987714-6987733 None:intergenic 45.0%
! TTCTTGTTTCGCTCAGGTCT+TGG - chr4_1:6987714-6987733 Msa0532660:CDS 45.0%
!! AAAAAAAAAAAATTGTTATA+AGG - chr4_1:6980746-6980765 Msa0532660:intron 5.0%
!! AAATAAAATTTCAATTTATA+CGG + chr4_1:6985755-6985774 None:intergenic 5.0%
! AATCGGAGCAGTTTTCCGGA+AGG - chr4_1:6979263-6979282 Msa0532660:three_prime_UTR 50.0%
!! TACTGGCTCCTCCAATTACC+AGG - chr4_1:6979298-6979317 Msa0532660:three_prime_UTR 50.0%
GCTGTACATGAAGACGGAAG+AGG - chr4_1:6979794-6979813 Msa0532660:CDS 50.0%
CTAGCCGAGCTAAACTCACA+TGG - chr4_1:6980147-6980166 Msa0532660:intron 50.0%
! GGAACGGGGATGATTTTACC+CGG + chr4_1:6981367-6981386 None:intergenic 50.0%
TCGAATTGTGTGTGGTGCTC+GGG + chr4_1:6981469-6981488 None:intergenic 50.0%
CGTATAGGAGCTTTGCCAGT+TGG + chr4_1:6981499-6981518 None:intergenic 50.0%
AGTGCCGCACTTAAATTCGC+CGG - chr4_1:6981624-6981643 Msa0532660:intron 50.0%
TCCTCCGGCGAATTTAAGTG+CGG + chr4_1:6981631-6981650 None:intergenic 50.0%
! AGTGGCGTTGGGACTTTGAA+TGG + chr4_1:6981815-6981834 None:intergenic 50.0%
!! GGTTGATGAAGAGTGGCGTT+GGG + chr4_1:6981826-6981845 None:intergenic 50.0%
TGTAGACCAAAGGATGAGGG+GGG + chr4_1:6982229-6982248 None:intergenic 50.0%
GTTTGTGAGTCTTGGTGGGA+GGG + chr4_1:6982416-6982435 None:intergenic 50.0%
!! AGCTTGTTGGGTGGAGGAAT+CGG + chr4_1:6982438-6982457 None:intergenic 50.0%
!! AGGGGCATTGATGAAGGAAG+TGG + chr4_1:6982804-6982823 None:intergenic 50.0%
!! AGGGTTAGGGGCATTGATGA+AGG + chr4_1:6982810-6982829 None:intergenic 50.0%
! TTTCTCTTGGTGTGGCGGAA+GGG + chr4_1:6982829-6982848 None:intergenic 50.0%
!! TTTTCTCTTGGTGTGGCGGA+AGG + chr4_1:6982830-6982849 None:intergenic 50.0%
CAATTTCCCAGCGGATCAAG+TGG + chr4_1:6982899-6982918 None:intergenic 50.0%
!! GTTGGTGGTTAATGAGGTGG+TGG + chr4_1:6983096-6983115 None:intergenic 50.0%
!! CGTGTTGGTGGTTAATGAGG+TGG + chr4_1:6983099-6983118 None:intergenic 50.0%
AAAGGAAGGCTCCTTGTGGA+CGG + chr4_1:6983122-6983141 None:intergenic 50.0%
CCATAAAGGAAGGCTCCTTG+TGG + chr4_1:6983126-6983145 None:intergenic 50.0%
CCACAAGGAGCCTTCCTTTA+TGG - chr4_1:6983123-6983142 Msa0532660:intron 50.0%
ATCCATCACTGCGGCTAATC+GGG - chr4_1:6983175-6983194 Msa0532660:intron 50.0%
CTTCGATGCTCACTCTCATC+GGG + chr4_1:6983261-6983280 None:intergenic 50.0%
TAAGGAGGTTTATGGGGAGG+TGG - chr4_1:6983437-6983456 Msa0532660:intron 50.0%
! TCCCGGACTTTTGTTGCCTT+TGG + chr4_1:6983910-6983929 None:intergenic 50.0%
AAGCTAAATCCAACCGGTCC+CGG + chr4_1:6983927-6983946 None:intergenic 50.0%
!! AGTGGGGGTATTAACCCAGA+CGG - chr4_1:6984694-6984713 Msa0532660:intron 50.0%
!! GAAATCAAGGGCGTCTTCGA+CGG + chr4_1:6985662-6985681 None:intergenic 50.0%
!! AGGAGAGTATCCAGCAAGCA+TGG - chr4_1:6985808-6985827 Msa0532660:intron 50.0%
! TGCATTGGCAGCATACATGC+TGG + chr4_1:6985927-6985946 None:intergenic 50.0%
GCTGCAGAATGTAGGGGAAT+TGG + chr4_1:6985956-6985975 None:intergenic 50.0%
ATTCCCCTACATTCTGCAGC+GGG - chr4_1:6985956-6985975 Msa0532660:intron 50.0%
AGTAGGTCCTGAATCCCCTT+TGG + chr4_1:6986653-6986672 None:intergenic 50.0%
! GCCTCTTCGAGTGATAGTGT+TGG + chr4_1:6986969-6986988 None:intergenic 50.0%
! GACGGATACACTGTGCGTTT+TGG - chr4_1:6987232-6987251 Msa0532660:intron 50.0%
! GTGTGATTTGGACGGTGTCG+TGG - chr4_1:6980178-6980197 Msa0532660:intron 55.0%
!! TGATTTGGACGGTGTCGTGG+TGG - chr4_1:6980181-6980200 Msa0532660:intron 55.0%
!! CGGTGTCGTGGTGGAAACTT+TGG - chr4_1:6980190-6980209 Msa0532660:intron 55.0%
ATGCCACTCTACGTGGCTAC+TGG - chr4_1:6980600-6980619 Msa0532660:intron 55.0%
!! CTCGGGTTTTCAAGAGGTGG+AGG + chr4_1:6981452-6981471 None:intergenic 55.0%
!! GTGCTCGGGTTTTCAAGAGG+TGG + chr4_1:6981455-6981474 None:intergenic 55.0%
!! GTGGTGCTCGGGTTTTCAAG+AGG + chr4_1:6981458-6981477 None:intergenic 55.0%
GAAGAGGGCTAAGGGGAATC+TGG + chr4_1:6981603-6981622 None:intergenic 55.0%
GGCACTAGAAGAGGGCTAAG+GGG + chr4_1:6981610-6981629 None:intergenic 55.0%
CGGCACTAGAAGAGGGCTAA+GGG + chr4_1:6981611-6981630 None:intergenic 55.0%
!! GGGTTGATGAAGAGTGGCGT+TGG + chr4_1:6981827-6981846 None:intergenic 55.0%
CAAAGGATGAGGGGGGGATT+AGG + chr4_1:6982222-6982241 None:intergenic 55.0%
CTAATCCCCCCCTCATCCTT+TGG - chr4_1:6982220-6982239 Msa0532660:intron 55.0%
GTAGACCAAAGGATGAGGGG+GGG + chr4_1:6982228-6982247 None:intergenic 55.0%
GGTTTGTGAGTCTTGGTGGG+AGG + chr4_1:6982417-6982436 None:intergenic 55.0%
! TTGGTGTGGCGGAAGGGTTA+GGG + chr4_1:6982823-6982842 None:intergenic 55.0%
!! AGGTGGTGGACTTCGCTAAG+AGG + chr4_1:6983082-6983101 None:intergenic 55.0%
!! CGGCGTGTTGGTGGTTAATG+AGG + chr4_1:6983102-6983121 None:intergenic 55.0%
! AACCCGATTAGCCGCAGTGA+TGG + chr4_1:6983180-6983199 None:intergenic 55.0%
AGGCAACAAAAGTCCGGGAC+CGG - chr4_1:6983911-6983930 Msa0532660:intron 55.0%
AACAAAAGTCCGGGACCGGT+TGG - chr4_1:6983915-6983934 Msa0532660:intron 55.0%
!! ATCACTCGAAGAGGCGCTCA+TGG - chr4_1:6986974-6986993 Msa0532660:intron 55.0%
CAGCCAGTAGCCACGTAGAG+TGG + chr4_1:6980606-6980625 None:intergenic 60.0%
GCGGCACTAGAAGAGGGCTA+AGG + chr4_1:6981612-6981631 None:intergenic 60.0%
GCCGCACTTAAATTCGCCGG+AGG - chr4_1:6981627-6981646 Msa0532660:intron 60.0%
! TGGTGTGGCGGAAGGGTTAG+GGG + chr4_1:6982822-6982841 None:intergenic 60.0%
! CTTGGTGTGGCGGAAGGGTT+AGG + chr4_1:6982824-6982843 None:intergenic 60.0%
GGAGGTTTATGGGGAGGTGG+AGG - chr4_1:6983440-6983459 Msa0532660:intron 60.0%
GACACCCTAAGCTCTCTGCC+CGG - chr4_1:6987290-6987309 Msa0532660:intron 60.0%
ACCACCGGGCAGAGAGCTTA+GGG + chr4_1:6987297-6987316 None:intergenic 60.0%
AACCACCGGGCAGAGAGCTT+AGG + chr4_1:6987298-6987317 None:intergenic 60.0%
AGCTCTCTGCCCGGTGGTTT+AGG - chr4_1:6987299-6987318 Msa0532660:intron 60.0%
CGTCCTCCACGTTGCAGATC+CGG - chr4_1:6987795-6987814 Msa0532660:CDS 60.0%
TCTCCGGATCTGCAACGTGG+AGG + chr4_1:6987801-6987820 None:intergenic 60.0%
CCTTGTGGACGGCGTGTTGG+TGG + chr4_1:6983111-6983130 None:intergenic 65.0%
CCACCAACACGCCGTCCACA+AGG - chr4_1:6983108-6983127 Msa0532660:intron 65.0%
GCTCCTTGTGGACGGCGTGT+TGG + chr4_1:6983114-6983133 None:intergenic 65.0%
CCGCCCGCTGCAGAATGTAG+GGG + chr4_1:6985962-6985981 None:intergenic 65.0%
CCCCTACATTCTGCAGCGGG+CGG - chr4_1:6985959-6985978 Msa0532660:intron 65.0%
GCCGCCCGCTGCAGAATGTA+GGG + chr4_1:6985963-6985982 None:intergenic 65.0%
ACCCTAAGCTCTCTGCCCGG+TGG - chr4_1:6987293-6987312 Msa0532660:intron 65.0%
CGCCGCCCGCTGCAGAATGT+AGG + chr4_1:6985964-6985983 None:intergenic 70.0%
!! TCTGCAGCGGGCGGCGCCGA+CGG - chr4_1:6985968-6985987 Msa0532660:intron 80.0%
Chromosome Type Strat End Strand Name
chr4_1 gene 6979203 6987821 6979203 ID=Msa0532660;Name=Msa0532660
chr4_1 mRNA 6979203 6987821 6979203 ID=Msa0532660-mRNA-1;Parent=Msa0532660;Name=Msa0532660-mRNA-1;_AED=0.16;_eAED=0.16;_QI=0|0.90|0.83|1|1|1|12|467|472
chr4_1 exon 6979203 6979853 6979203 ID=Msa0532660-mRNA-1:exon:2449;Parent=Msa0532660-mRNA-1
chr4_1 exon 6979970 6980078 6979970 ID=Msa0532660-mRNA-1:exon:2448;Parent=Msa0532660-mRNA-1
chr4_1 exon 6980299 6980398 6980299 ID=Msa0532660-mRNA-1:exon:2447;Parent=Msa0532660-mRNA-1
chr4_1 exon 6980470 6980504 6980470 ID=Msa0532660-mRNA-1:exon:2446;Parent=Msa0532660-mRNA-1
chr4_1 exon 6981026 6981237 6981026 ID=Msa0532660-mRNA-1:exon:2445;Parent=Msa0532660-mRNA-1
chr4_1 exon 6981332 6981625 6981332 ID=Msa0532660-mRNA-1:exon:2444;Parent=Msa0532660-mRNA-1
chr4_1 exon 6982086 6982173 6982086 ID=Msa0532660-mRNA-1:exon:2443;Parent=Msa0532660-mRNA-1
chr4_1 exon 6982264 6982341 6982264 ID=Msa0532660-mRNA-1:exon:2442;Parent=Msa0532660-mRNA-1
chr4_1 exon 6982434 6982509 6982434 ID=Msa0532660-mRNA-1:exon:2441;Parent=Msa0532660-mRNA-1
chr4_1 exon 6986292 6986350 6986292 ID=Msa0532660-mRNA-1:exon:2440;Parent=Msa0532660-mRNA-1
chr4_1 exon 6987173 6987239 6987173 ID=Msa0532660-mRNA-1:exon:2439;Parent=Msa0532660-mRNA-1
chr4_1 exon 6987705 6987821 6987705 ID=Msa0532660-mRNA-1:exon:2438;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6987705 6987821 6987705 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6987173 6987239 6987173 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6986292 6986350 6986292 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6982434 6982509 6982434 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6982264 6982341 6982264 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6982086 6982173 6982086 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6981332 6981625 6981332 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6981026 6981237 6981026 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6980470 6980504 6980470 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6980299 6980398 6980299 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6979970 6980078 6979970 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 CDS 6979670 6979853 6979670 ID=Msa0532660-mRNA-1:cds;Parent=Msa0532660-mRNA-1
chr4_1 three_prime_UTR 6979203 6979669 6979203 ID=Msa0532660-mRNA-1:three_prime_utr;Parent=Msa0532660-mRNA-1
Gene Sequence

>Msa0532660

ATGTTTATTTTAGGGGCGGGACCTGTTATTGCCTCTATTTATGCTGACAGTTTTGAGCTAAATCGGAGCAGTTTTCCGGAAGGTTTTGTTTTTGGTACTGGCTCCTCCAATTACCAGTATGAAGGTGCTGTACATGAAGACGGAAGAGGAATTGGTACATGGGATATATTTGCCCATACACCAGGGAAGGTAAAGGATGGAAAGAATGCAGATGTAGCAATTGATCACTATCATCGCTATAAGGAAGATGTTCAAATCATGAAGAATATGAATACAGATGCATACAGATTCTCCATATCTTGGCCAAGGATATTGCCAAAAGGAAAACTAAGTGGGGGTATTAACCCAGACGGAATTAGATTTTACAAAAACCTGATCGATGAGCTACTTAATAATGGTCAAATACCATATGTGACTCTTTTTCATTGGGATCTTCCCCAAGCCTTACAAGATGATTATGGAGGCTTTGTCAGCGAGAATATTAGAAAAGATTTTAAGGACTTTGTGGATATTTGCTTCCTGGAATTTGGAGACAAAGTAAAGCATTGGGTTACTTTTAATGAGCCATTCTCTTACACTTTGAGTACATCAGATTGGTACCAGTCAACACACAACCAACTTCTTGCTCATGCAGATGTTGTCGAAATGTATAAAACGAAATATCAGGGTCAAAATGGTGTAATAGGCATTGGATTAAACTCTCACTGGTTTAAACCATACTCAACTGACCCATTAGATCAAAAAGCCGTCGAAGACGCCCTTGATTTCATGTTTGGATGGTTTATACAACCACTAACAACAGGAGAGTATCCAGCAAGCATGGTGTCTTATGTGGGAGATAAGTTACCAAAGTTCACTCAAGAGCAATCTAAGAGTCTTATTGGGTCATATGATTTTATTGGAATCAATTACTACACCAGCATGTATGCTGCCAATGCAACGAAACCAATTCCCCTACATTCTGCAGCGGGCGGCGCCGACGGCGTTAATAATGTGAATAAAGAAGGGACATACATTGGAGCATGGGCTGCAACTTGGCTATATGTTTGTCCAAAGGGGATTCAGGACCTACTGTTGTACACAAAGGAAAAGTATAACAATCCTACGATTATCATAACAGAAAATGGTATGAATGAAGTCAATGATCCAACACTATCACTCGAAGAGGCGCTCATGGATACTAACAGAATTGATTACTTTTATCGTCATCTATATTATCTTTTATCTGCAATGAGGCAAGGTGTGAATGTAAAAGGATACTTTGCATGGTCCCTTTTGGACAACTTTGAATGGAATGACGGATACACTGTGCGTTTTGGAATTAACTTTGTTGATTATGACAATGGTCTTAGAAGACACCCTAAGCTCTCTGCCCGGTGGTTTAGGAAGTTTCTTGAACATAATAGAATTATTGGTTGA
Protein sequence

>Msa0532660

MFILGAGPVIASIYADSFELNRSSFPEGFVFGTGSSNYQYEGAVHEDGRGIGTWDIFAHTPGKVKDGKNADVAIDHYHRYKEDVQIMKNMNTDAYRFSISWPRILPKGKLSGGINPDGIRFYKNLIDELLNNGQIPYVTLFHWDLPQALQDDYGGFVSENIRKDFKDFVDICFLEFGDKVKHWVTFNEPFSYTLSTSDWYQSTHNQLLAHADVVEMYKTKYQGQNGVIGIGLNSHWFKPYSTDPLDQKAVEDALDFMFGWFIQPLTTGEYPASMVSYVGDKLPKFTQEQSKSLIGSYDFIGINYYTSMYAANATKPIPLHSAAGGADGVNNVNKEGTYIGAWAATWLYVCPKGIQDLLLYTKEKYNNPTIIITENGMNEVNDPTLSLEEALMDTNRIDYFYRHLYYLLSAMRQGVNVKGYFAWSLLDNFEWNDGYTVRFGINFVDYDNGLRRHPKLSARWFRKFLEHNRIIG*