AlfalfaGEDB | Msa0613920

M. sativa cultivar zhongmu-4 / Msa0613920

KEGG: K22314
GO: -
PFAM: PF00117.31

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0613920	XP_003608377.2	98.106	264	5	0	1	264	1	264	0.0	536

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0613920	sp\|O82225\|GGP5_ARATH	50.202	247	121	1	4	248	1	247	4.25e-88	265

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0613920	G7JV26	98.106	264	5	0	1	264	1	264	0.0	536

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001450	Msa0613920	0.818345	2.057226e-52	-8.615850e-47
Msa0008090	Msa0613920	0.806311	8.748858e-50	-8.615850e-47
Msa0020390	Msa0613920	0.822419	2.393336e-53	-8.615850e-47
Msa0027890	Msa0613920	0.808770	2.630045e-50	-8.615850e-47
Msa0043980	Msa0613920	0.805497	1.297155e-49	-8.615850e-47
Msa0046740	Msa0613920	0.802587	5.227729e-49	-8.615850e-47
Msa0048180	Msa0613920	0.804885	1.742358e-49	-8.615850e-47
Msa0064350	Msa0613920	0.814018	1.907702e-51	-8.615850e-47
Msa0068020	Msa0613920	0.814329	1.628644e-51	-8.615850e-47
Msa0069330	Msa0613920	0.802702	4.948651e-49	-8.615850e-47
Msa0076040	Msa0613920	0.805234	1.473014e-49	-8.615850e-47
Msa0090520	Msa0613920	0.828751	7.553601e-55	-8.615850e-47
Msa0090550	Msa0613920	0.816058	6.724527e-52	-8.615850e-47
Msa0091610	Msa0613920	0.833921	4.038610e-56	-8.615850e-47
Msa0104550	Msa0613920	0.800694	1.278188e-48	-8.615850e-47
Msa0115370	Msa0613920	0.804875	1.750826e-49	-8.615850e-47
Msa0115990	Msa0613920	0.800878	1.172361e-48	-8.615850e-47
Msa0604290	Msa0613920	0.812252	4.655229e-51	-8.615850e-47
Msa0613920	Msa0638460	0.847340	1.230189e-59	-8.615850e-47
Msa0613920	Msa0651050	0.805052	1.608338e-49	-8.615850e-47
Msa0613920	Msa0662630	0.813345	2.682798e-51	-8.615850e-47
Msa0613920	Msa0689500	0.807567	4.746550e-50	-8.615850e-47
Msa0613920	Msa0697080	0.933264	2.445435e-95	-8.615850e-47
Msa0613920	Msa0721230	0.819417	1.174186e-52	-8.615850e-47
Msa0613920	Msa0752510	0.802215	6.235262e-49	-8.615850e-47
Msa0613920	Msa0827280	0.807383	5.192667e-50	-8.615850e-47
Msa0613920	Msa0832700	0.817567	3.084181e-52	-8.615850e-47
Msa0613920	Msa1089320	0.810897	9.173106e-51	-8.615850e-47
Msa0613920	Msa1126510	0.800109	1.681695e-48	-8.615850e-47
Msa0613920	Msa1126770	0.803595	3.234938e-49	-8.615850e-47
Msa0613920	Msa1130980	0.813281	2.770858e-51	-8.615850e-47
Msa0613920	Msa1165940	0.807879	4.073933e-50	-8.615850e-47
Msa0613920	Msa1218600	0.809632	1.718880e-50	-8.615850e-47
Msa0613920	Msa1230580	0.802705	4.941606e-49	-8.615850e-47
Msa0613920	Msa1239910	0.810908	9.121418e-51	-8.615850e-47
Msa0613920	Msa1251160	0.825606	4.277954e-54	-8.615850e-47
Msa0613920	Msa1256470	0.823499	1.340266e-53	-8.615850e-47
Msa0613920	Msa1295490	-0.800807	1.211888e-48	-8.615850e-47
Msa0613920	Msa1305700	0.809099	2.236351e-50	-8.615850e-47
Msa0613920	Msa1305710	0.803371	3.599587e-49	-8.615850e-47
Msa0613920	Msa1362420	0.834913	2.277125e-56	-8.615850e-47
Msa0613920	Msa1364210	0.810861	9.335772e-51	-8.615850e-47
Msa0613920	Msa1376650	0.827193	1.790735e-54	-8.615850e-47
Msa0613920	Msa1418340	0.814407	1.565184e-51	-8.615850e-47
Msa0613920	Msa1422580	0.808904	2.462244e-50	-8.615850e-47
Msa0613920	Msa1434420	-0.820627	6.205270e-53	-8.615850e-47
Msa0613920	Msa1461280	0.814592	1.424490e-51	-8.615850e-47
Msa0613920	Msa1462290	0.848622	5.450865e-60	-8.615850e-47
Msa0123560	Msa0613920	0.832249	1.053019e-55	-8.615850e-47
Msa0125450	Msa0613920	0.811199	7.888930e-51	-8.615850e-47
Msa0125540	Msa0613920	0.821601	3.702114e-53	-8.615850e-47
Msa0127850	Msa0613920	0.801548	8.549914e-49	-8.615850e-47
Msa0136120	Msa0613920	0.810958	8.895153e-51	-8.615850e-47
Msa0137990	Msa0613920	0.830921	2.236464e-55	-8.615850e-47
Msa0139320	Msa0613920	0.832862	7.418950e-56	-8.615850e-47
Msa0140110	Msa0613920	0.805086	1.582207e-49	-8.615850e-47
Msa0140820	Msa0613920	0.816981	4.178149e-52	-8.615850e-47
Msa0159420	Msa0613920	0.802981	4.334334e-49	-8.615850e-47
Msa0167980	Msa0613920	0.800805	1.213323e-48	-8.615850e-47
Msa0183900	Msa0613920	0.831877	1.301128e-55	-8.615850e-47
Msa0191070	Msa0613920	0.815632	8.367748e-52	-8.615850e-47
Msa0195630	Msa0613920	0.812875	3.401757e-51	-8.615850e-47
Msa0204960	Msa0613920	0.815062	1.120663e-51	-8.615850e-47
Msa0217670	Msa0613920	0.829533	4.880324e-55	-8.615850e-47
Msa0237410	Msa0613920	0.821451	4.009317e-53	-8.615850e-47
Msa0380300	Msa0613920	0.836682	8.109645e-57	-8.615850e-47
Msa0385500	Msa0613920	0.810307	1.229985e-50	-8.615850e-47
Msa0389510	Msa0613920	0.805325	1.409812e-49	-8.615850e-47
Msa0479270	Msa0613920	0.801768	7.704570e-49	-8.615850e-47
Msa0244980	Msa0613920	0.817024	4.085909e-52	-8.615850e-47
Msa0257490	Msa0613920	0.819905	9.087560e-53	-8.615850e-47
Msa0281530	Msa0613920	0.805643	1.208755e-49	-8.615850e-47
Msa0283420	Msa0613920	0.819849	9.356584e-53	-8.615850e-47
Msa0291500	Msa0613920	0.809207	2.120610e-50	-8.615850e-47
Msa0296790	Msa0613920	0.824679	7.082007e-54	-8.615850e-47
Msa0311700	Msa0613920	0.810815	9.555101e-51	-8.615850e-47
Msa0321690	Msa0613920	0.808536	2.950729e-50	-8.615850e-47
Msa0484740	Msa0613920	0.836070	1.160662e-56	-8.615850e-47
Msa0516800	Msa0613920	0.812972	3.238697e-51	-8.615850e-47
Msa0521050	Msa0613920	0.825826	3.793568e-54	-8.615850e-47
Msa0524500	Msa0613920	0.814039	1.887067e-51	-8.615850e-47
Msa0552810	Msa0613920	0.815613	8.453564e-52	-8.615850e-47
Msa0556860	Msa0613920	0.802288	6.023081e-49	-8.615850e-47
Msa0559790	Msa0613920	0.914503	1.775014e-84	-8.615850e-47
Msa0580230	Msa0613920	0.823864	1.100703e-53	-8.615850e-47
Msa0580280	Msa0613920	0.845037	5.211601e-59	-8.615850e-47
Msa0581070	Msa0613920	0.816111	6.543182e-52	-8.615850e-47
Msa0581110	Msa0613920	0.801745	7.787563e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0613920	MtrunA17_Chr4g0049711	98.106	264	5	0	1	264	1	264	0.0	536
Msa0613920	MtrunA17_Chr2g0279701	58.750	240	96	1	9	248	8	244	2.79e-102	298
Msa0613920	MtrunA17_Chr5g0437541	73.759	141	35	1	109	249	3	141	5.67e-72	217
Msa0613920	MtrunA17_Chr5g0437551	70.000	110	31	1	1	110	1	108	3.50e-53	168

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0613920	AT2G23970.1	50.202	247	121	1	4	248	1	247	4.32e-89	265
Msa0613920	AT4G30550.1	47.107	242	125	1	9	247	8	249	7.87e-82	246
Msa0613920	AT4G30540.1	48.750	240	123	0	9	248	6	245	2.92e-79	239
Msa0613920	AT2G23960.1	45.417	240	129	1	9	246	5	244	3.80e-75	229
Msa0613920	AT4G30530.1	44.628	242	132	1	9	248	5	246	7.02e-74	226
Msa0613920	AT2G23960.2	47.549	204	105	1	9	210	5	208	3.90e-67	207

Find 94 sgRNAs with CRISPR-Local

Find 310 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAAATGTACGGAGGGTATTT+TGG	0.159436	4_2:+62840165	Msa0613920:CDS
GTGGGAGTGGGAAGAGATTT+GGG	0.222436	4_2:+62840106	Msa0613920:CDS
CTCTTCCATGCCTCCTTATC+TGG	0.241065	4_2:-62841844	None:intergenic
AGATTCAATTCATCATCTTT+TGG	0.253880	4_2:-62840258	None:intergenic
GGTGGGAGTGGGAAGAGATT+TGG	0.284552	4_2:+62840105	Msa0613920:CDS
TAGATATGGAGATCACATTA+TGG	0.306527	4_2:+62841564	Msa0613920:CDS
TGGCATTTGCTTTGGTCATC+AGG	0.316497	4_2:+62840395	Msa0613920:CDS
GGAATAGAAAATATAAATAT+TGG	0.322855	4_2:+62841910	Msa0613920:CDS
TGTTAATTTGATTAGATACT+TGG	0.341295	4_2:+62841183	Msa0613920:intron
ATCCCTGTGGCATTGAATAA+TGG	0.342555	4_2:-62841328	None:intergenic
TGTGCTAAAGTACAAATTCA+TGG	0.357071	4_2:+62842206	Msa0613920:three_prime_UTR
TAGATACTTGGCCGTGCAAT+TGG	0.364461	4_2:+62841195	Msa0613920:intron
GGAATTGAGATGTTTAGATA+TGG	0.367188	4_2:+62841550	Msa0613920:CDS
AGAGAGATTGAGAGAGAGAA+AGG	0.368565	4_2:-62839976	None:intergenic
AAAATCCTTGGCATTTGCTT+TGG	0.382494	4_2:+62840387	Msa0613920:CDS
TGAAAGCTGGGATGTGTATA+AGG	0.394224	4_2:+62840218	Msa0613920:CDS
TCTCCAACTGGCTGGGACAT+TGG	0.414581	4_2:+62841234	Msa0613920:CDS
AGATATGGAGATCACATTAT+GGG	0.414653	4_2:+62841565	Msa0613920:CDS
ATGGAGAAAATGGGTGGGAG+TGG	0.420979	4_2:+62840093	Msa0613920:CDS
GGTCGTTATTGTGAAAGAAA+TGG	0.428460	4_2:+62841889	Msa0613920:CDS
AATATTTACAATTTCACATC+AGG	0.432082	4_2:-62842077	None:intergenic
TGGAGGAAGAAGGTGAAAGC+TGG	0.433224	4_2:+62840205	Msa0613920:CDS
TGGGAGTGGGAAGAGATTTG+GGG	0.472039	4_2:+62840107	Msa0613920:CDS
TTTCCATTATTCAATGCCAC+AGG	0.474211	4_2:+62841325	Msa0613920:CDS
GACATGAACAAGAAAATCCT+TGG	0.480295	4_2:+62840375	Msa0613920:CDS
TTAATTAAGAAAATGTAGAA+AGG	0.481066	4_2:+62842155	Msa0613920:three_prime_UTR
TGAAGGAGAAGGCTGGTATG+TGG	0.491137	4_2:+62841818	Msa0613920:CDS
AAAGAAATCCCAAATTCAAA+AGG	0.492126	4_2:-62842134	None:intergenic
TGGGGTATTTGTGAGAATGT+TGG	0.492454	4_2:+62840185	Msa0613920:CDS
TGGAGAAAATGGGTGGGAGT+GGG	0.495317	4_2:+62840094	Msa0613920:CDS
AAGGTGACTCGATCTCCAAC+TGG	0.496252	4_2:+62841222	Msa0613920:CDS
TGACTCGATCTCCAACTGGC+TGG	0.497560	4_2:+62841226	Msa0613920:CDS
GACTCGATCTCCAACTGGCT+GGG	0.497877	4_2:+62841227	Msa0613920:CDS
GAGAGATTGAGAGAGAGAAA+GGG	0.498796	4_2:-62839975	None:intergenic
GTGAGAATGTTGGAGGAAGA+AGG	0.500993	4_2:+62840195	Msa0613920:CDS
TTGGTGGTATATTCTAAAGT+AGG	0.501303	4_2:+62841929	Msa0613920:exon
TGAATAATGGAAAGCCTCGT+TGG	0.506469	4_2:-62841315	None:intergenic
GCAATCACTTCAGCCTTGGC+AGG	0.507796	4_2:-62841511	None:intergenic
TGCTATGAGATTGAAGGAGA+AGG	0.513622	4_2:+62841807	Msa0613920:CDS
GACAAAGGAGATGGCAAAGA+GGG	0.513633	4_2:-62841279	None:intergenic
AGGGTGATAATGTTATGTTT+CGG	0.519404	4_2:-62841260	None:intergenic
ATACTTGGCCGTGCAATTGG+AGG	0.519944	4_2:+62841198	Msa0613920:CDS
ATGTGCCACACCTTAATTAG+TGG	0.525601	4_2:-62841991	None:intergenic
TGGTATGTGGGAGCCAGATA+AGG	0.526816	4_2:+62841831	Msa0613920:CDS
ATTGCTAAATCAGATAAGAC+TGG	0.527568	4_2:+62841529	Msa0613920:CDS
ATTCTAAAGTAGGAATCGTA+TGG	0.528680	4_2:+62841939	Msa0613920:exon
TTTAGCAATCACTTCAGCCT+TGG	0.530782	4_2:-62841515	None:intergenic
TAGAGTACTCAGGATGACCT+TGG	0.533908	4_2:-62841591	None:intergenic
TATTCAATGCCACAGGGATG+AGG	0.540762	4_2:+62841332	Msa0613920:CDS
AACACATGCATCTAGCTAGC+TGG	0.545938	4_2:-62842017	None:intergenic
TGAAATTTCGCTGAATAAGA+CGG	0.555005	4_2:-62841639	None:intergenic
ATAGAAAATATAAATATTGG+TGG	0.558147	4_2:+62841913	Msa0613920:CDS
TTAGAGGGAGAAAGCATCAC+CGG	0.558875	4_2:+62840036	Msa0613920:five_prime_UTR
GCTAAGAGAGCTACCTGCCA+AGG	0.562053	4_2:+62841498	Msa0613920:intron
TGTGCCACACCTTAATTAGT+GGG	0.563093	4_2:-62841990	None:intergenic
TCAAGAGAAGACAAAGGAGA+TGG	0.563452	4_2:-62841288	None:intergenic
GATGAATTGAATCTGTATGA+TGG	0.565280	4_2:+62840267	Msa0613920:CDS
GGAGGAAGAAGGTGAAAGCT+GGG	0.565836	4_2:+62840206	Msa0613920:CDS
ACTATGCATCAGCTTCCTCA+AGG	0.566000	4_2:+62841867	Msa0613920:CDS
ACACCAATGTCCCAGCCAGT+TGG	0.568855	4_2:-62841237	None:intergenic
GAAGGAGAAGGCTGGTATGT+GGG	0.577034	4_2:+62841819	Msa0613920:CDS
GAATATGTGAAGAAAATGTA+CGG	0.585607	4_2:+62840153	Msa0613920:CDS
TGGCCGTGCAATTGGAGGGA+AGG	0.591128	4_2:+62841203	Msa0613920:CDS
TACTTGGCCGTGCAATTGGA+GGG	0.593875	4_2:+62841199	Msa0613920:CDS
GATCACATTATGGGAATCCA+AGG	0.596532	4_2:+62841574	Msa0613920:CDS
ATGAGATTGAAGGAGAAGGC+TGG	0.598435	4_2:+62841811	Msa0613920:CDS
ATGTGAAGAAAATGTACGGA+GGG	0.598596	4_2:+62840157	Msa0613920:CDS
AGACAAAGGAGATGGCAAAG+AGG	0.600946	4_2:-62841280	None:intergenic
TTCCATTATTCAATGCCACA+GGG	0.604354	4_2:+62841326	Msa0613920:CDS
AAAAGTTAATAGGAAACTAA+GGG	0.606602	4_2:+62841963	Msa0613920:three_prime_UTR
ATGCACATGGAAATGATACA+TGG	0.606888	4_2:+62840316	Msa0613920:CDS
TTAAGGATGGAGAAAATGGG+TGG	0.607618	4_2:+62840087	Msa0613920:exon
TCACCTTCCCTCCAATTGCA+CGG	0.609277	4_2:-62841206	None:intergenic
TAAGGATGGAGAAAATGGGT+GGG	0.609645	4_2:+62840088	Msa0613920:exon
GGGAGCCAGATAAGGAGGCA+TGG	0.620410	4_2:+62841839	Msa0613920:CDS
GGTATTTGTGAGAATGTTGG+AGG	0.624181	4_2:+62840188	Msa0613920:CDS
TAAGAAAATGTAGAAAGGCG+TGG	0.624356	4_2:+62842160	Msa0613920:three_prime_UTR
GGAAGTTCAAGAGAAGACAA+AGG	0.628531	4_2:-62841294	None:intergenic
TAGAGAGAGAAAGTGCAAGG+TGG	0.634472	4_2:-62840000	None:intergenic
CTATGCATCAGCTTCCTCAA+GGG	0.636887	4_2:+62841868	Msa0613920:CDS
AGAATGTCTTTAGAGTACTC+AGG	0.643445	4_2:-62841601	None:intergenic
TATGTGGGAGCCAGATAAGG+AGG	0.645828	4_2:+62841834	Msa0613920:CDS
CTTCTCTTGAACTTCCAACG+AGG	0.646837	4_2:+62841301	Msa0613920:CDS
GTGCCACACCTTAATTAGTG+GGG	0.647793	4_2:-62841989	None:intergenic
GATGACCAAAGCAAATGCCA+AGG	0.653162	4_2:-62840392	None:intergenic
TATTCAGCGAAATTTCATCA+CGG	0.662548	4_2:+62841645	Msa0613920:CDS
TATGTGAAGAAAATGTACGG+AGG	0.666492	4_2:+62840156	Msa0613920:CDS
TTTCACAATAACGACCCTTG+AGG	0.678121	4_2:-62841882	None:intergenic
TGCCACACCTTAATTAGTGG+GGG	0.683463	4_2:-62841988	None:intergenic
TGCACATGGAAATGATACAT+GGG	0.699531	4_2:+62840317	Msa0613920:CDS
GATGTGTATAAGGTGGCGCG+TGG	0.734044	4_2:+62840228	Msa0613920:CDS
GGTAGTTGTAGTGATGCACA+TGG	0.738222	4_2:+62840303	Msa0613920:CDS
AAGCTGGGATGTGTATAAGG+TGG	0.761338	4_2:+62840221	Msa0613920:CDS
ACACACACACCTCATCCCTG+TGG	0.770427	4_2:-62841341	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATAAATAAATGAAGTAATAA+AGG	-	chr4_2:62841686-62841705	None:intergenic	10.0%
!!	TATTACTTCATTTATTTATT+TGG	+	chr4_2:62841687-62841706	Msa0613920:intron	10.0%
!!	ATAAATAAATGAAGTAATAA+AGG	-	chr4_2:62841686-62841705	None:intergenic	10.0%
!!	TATTACTTCATTTATTTATT+TGG	+	chr4_2:62841687-62841706	Msa0613920:intron	10.0%
!!!	TAAAAAACAACATTTTTAGA+GGG	+	chr4_2:62840021-62840040	Msa0613920:five_prime_UTR	15.0%
!!!	ATCAAAAAACAAATCTTTTA+AGG	+	chr4_2:62840070-62840089	Msa0613920:five_prime_UTR	15.0%
!!	AGTGATTTAATTACTAAATA+TGG	-	chr4_2:62840438-62840457	None:intergenic	15.0%
!!	ATATTTAGTAATTAAATCAC+TGG	+	chr4_2:62840437-62840456	Msa0613920:intron	15.0%
!!	AAATAACAAAATTACTAGAA+AGG	-	chr4_2:62840517-62840536	None:intergenic	15.0%
!!	TCAAAAAAAAAAAAGGAATA+GGG	+	chr4_2:62840547-62840566	Msa0613920:intron	15.0%
!!	GTTAAATATTACTAGTAATA+TGG	-	chr4_2:62840835-62840854	None:intergenic	15.0%
!!	TATTACTAGTAATATTTAAC+CGG	+	chr4_2:62840835-62840854	Msa0613920:intron	15.0%
!!	TTATAAAGTTAATTAATGGT+AGG	-	chr4_2:62841132-62841151	None:intergenic	15.0%
!!	ACCATTAATTAACTTTATAA+AGG	+	chr4_2:62841132-62841151	Msa0613920:intron	15.0%
!!	TCCTTTATAAAGTTAATTAA+TGG	-	chr4_2:62841136-62841155	None:intergenic	15.0%
!!	TTAATCGTAATTAAATTTAC+TGG	+	chr4_2:62841761-62841780	Msa0613920:intron	15.0%
!!	GGAATAGAAAATATAAATAT+TGG	+	chr4_2:62841910-62841929	Msa0613920:CDS	15.0%
!!	ATAGAAAATATAAATATTGG+TGG	+	chr4_2:62841913-62841932	Msa0613920:CDS	15.0%
!!	TTAATTAAGAAAATGTAGAA+AGG	+	chr4_2:62842155-62842174	Msa0613920:three_prime_UTR	15.0%
!!!	TAAAAAACAACATTTTTAGA+GGG	+	chr4_2:62840021-62840040	Msa0613920:five_prime_UTR	15.0%
!!!	ATCAAAAAACAAATCTTTTA+AGG	+	chr4_2:62840070-62840089	Msa0613920:five_prime_UTR	15.0%
!!	AGTGATTTAATTACTAAATA+TGG	-	chr4_2:62840438-62840457	None:intergenic	15.0%
!!	ATATTTAGTAATTAAATCAC+TGG	+	chr4_2:62840437-62840456	Msa0613920:intron	15.0%
!!	AAATAACAAAATTACTAGAA+AGG	-	chr4_2:62840517-62840536	None:intergenic	15.0%
!!	TCAAAAAAAAAAAAGGAATA+GGG	+	chr4_2:62840547-62840566	Msa0613920:intron	15.0%
!!	GTTAAATATTACTAGTAATA+TGG	-	chr4_2:62840835-62840854	None:intergenic	15.0%
!!	TATTACTAGTAATATTTAAC+CGG	+	chr4_2:62840835-62840854	Msa0613920:intron	15.0%
!!	TTATAAAGTTAATTAATGGT+AGG	-	chr4_2:62841132-62841151	None:intergenic	15.0%
!!	ACCATTAATTAACTTTATAA+AGG	+	chr4_2:62841132-62841151	Msa0613920:intron	15.0%
!!	TCCTTTATAAAGTTAATTAA+TGG	-	chr4_2:62841136-62841155	None:intergenic	15.0%
!!	TTAATCGTAATTAAATTTAC+TGG	+	chr4_2:62841761-62841780	Msa0613920:intron	15.0%
!!	GGAATAGAAAATATAAATAT+TGG	+	chr4_2:62841910-62841929	Msa0613920:CDS	15.0%
!!	ATAGAAAATATAAATATTGG+TGG	+	chr4_2:62841913-62841932	Msa0613920:CDS	15.0%
!!	TTAATTAAGAAAATGTAGAA+AGG	+	chr4_2:62842155-62842174	Msa0613920:three_prime_UTR	15.0%
!!!	CTAAAAAACAACATTTTTAG+AGG	+	chr4_2:62840020-62840039	Msa0613920:five_prime_UTR	20.0%
!!!	AAGATTTGTTTTTTGATTCT+GGG	-	chr4_2:62840067-62840086	None:intergenic	20.0%
!!!	AAAGATTTGTTTTTTGATTC+TGG	-	chr4_2:62840068-62840087	None:intergenic	20.0%
!!!	AAAAACAAATCTTTTAAGGA+TGG	+	chr4_2:62840074-62840093	Msa0613920:exon	20.0%
!!!	AAAAATGAAAGGTTTGAAAT+GGG	-	chr4_2:62840492-62840511	None:intergenic	20.0%
!!	AAAAAATGAAAGGTTTGAAA+TGG	-	chr4_2:62840493-62840512	None:intergenic	20.0%
!!	GCAATTGTCAAAAAAAAAAA+AGG	+	chr4_2:62840540-62840559	Msa0613920:intron	20.0%
!!	GTCAAAAAAAAAAAAGGAAT+AGG	+	chr4_2:62840546-62840565	Msa0613920:intron	20.0%
!!	AAAATACCTTAGAAATTCTT+AGG	+	chr4_2:62840633-62840652	Msa0613920:intron	20.0%
!!	AATATTACTAGTAATATGGA+TGG	-	chr4_2:62840831-62840850	None:intergenic	20.0%
!!	TACAAAAAAAGACAAAATCA+TGG	-	chr4_2:62841040-62841059	None:intergenic	20.0%
!!	AGGAAATAATAATAATTGAG+AGG	+	chr4_2:62841152-62841171	Msa0613920:intron	20.0%
!!	GGAAATAATAATAATTGAGA+GGG	+	chr4_2:62841153-62841172	Msa0613920:intron	20.0%
!!!	TGTTAATTTGATTAGATACT+TGG	+	chr4_2:62841183-62841202	Msa0613920:intron	20.0%
!!!	ATTTTTTTTAATCATAGCAC+AGG	+	chr4_2:62841424-62841443	Msa0613920:intron	20.0%
!!	GCTAATTAATTAAATCCAAA+AGG	-	chr4_2:62841480-62841499	None:intergenic	20.0%
!!	AAAAAGTTAATAGGAAACTA+AGG	+	chr4_2:62841962-62841981	Msa0613920:three_prime_UTR	20.0%
!!	AAAAGTTAATAGGAAACTAA+GGG	+	chr4_2:62841963-62841982	Msa0613920:three_prime_UTR	20.0%
!!	AATATTTACAATTTCACATC+AGG	-	chr4_2:62842080-62842099	None:intergenic	20.0%
!!!	CTAAAAAACAACATTTTTAG+AGG	+	chr4_2:62840020-62840039	Msa0613920:five_prime_UTR	20.0%
!!!	AAGATTTGTTTTTTGATTCT+GGG	-	chr4_2:62840067-62840086	None:intergenic	20.0%
!!!	AAAGATTTGTTTTTTGATTC+TGG	-	chr4_2:62840068-62840087	None:intergenic	20.0%
!!!	AAAAACAAATCTTTTAAGGA+TGG	+	chr4_2:62840074-62840093	Msa0613920:exon	20.0%
!!!	AAAAATGAAAGGTTTGAAAT+GGG	-	chr4_2:62840492-62840511	None:intergenic	20.0%
!!	AAAAAATGAAAGGTTTGAAA+TGG	-	chr4_2:62840493-62840512	None:intergenic	20.0%
!!	GCAATTGTCAAAAAAAAAAA+AGG	+	chr4_2:62840540-62840559	Msa0613920:intron	20.0%
!!	GTCAAAAAAAAAAAAGGAAT+AGG	+	chr4_2:62840546-62840565	Msa0613920:intron	20.0%
!!	AAAATACCTTAGAAATTCTT+AGG	+	chr4_2:62840633-62840652	Msa0613920:intron	20.0%
!!	AATATTACTAGTAATATGGA+TGG	-	chr4_2:62840831-62840850	None:intergenic	20.0%
!!	TACAAAAAAAGACAAAATCA+TGG	-	chr4_2:62841040-62841059	None:intergenic	20.0%
!!	AGGAAATAATAATAATTGAG+AGG	+	chr4_2:62841152-62841171	Msa0613920:intron	20.0%
!!	GGAAATAATAATAATTGAGA+GGG	+	chr4_2:62841153-62841172	Msa0613920:intron	20.0%
!!!	TGTTAATTTGATTAGATACT+TGG	+	chr4_2:62841183-62841202	Msa0613920:intron	20.0%
!!!	ATTTTTTTTAATCATAGCAC+AGG	+	chr4_2:62841424-62841443	Msa0613920:intron	20.0%
!!	GCTAATTAATTAAATCCAAA+AGG	-	chr4_2:62841480-62841499	None:intergenic	20.0%
!!	AAAAAGTTAATAGGAAACTA+AGG	+	chr4_2:62841962-62841981	Msa0613920:three_prime_UTR	20.0%
!!	AAAAGTTAATAGGAAACTAA+GGG	+	chr4_2:62841963-62841982	Msa0613920:three_prime_UTR	20.0%
!!	AATATTTACAATTTCACATC+AGG	-	chr4_2:62842080-62842099	None:intergenic	20.0%
!	GAATATGTGAAGAAAATGTA+CGG	+	chr4_2:62840153-62840172	Msa0613920:CDS	25.0%
!!	AGATTCAATTCATCATCTTT+TGG	-	chr4_2:62840261-62840280	None:intergenic	25.0%
!	CTAGAAAGGTAAAAAATGAA+AGG	-	chr4_2:62840503-62840522	None:intergenic	25.0%
!!	TCTTGATATATTTCTCCTTT+TGG	+	chr4_2:62841462-62841481	Msa0613920:intron	25.0%
!	GAAGTAATAAAGGAAAATGA+TGG	-	chr4_2:62841676-62841695	None:intergenic	25.0%
!!!	AAATTTTGCTATGAGATTGA+AGG	+	chr4_2:62841801-62841820	Msa0613920:CDS	25.0%
!	ATCGTATGGAAAAAGTTAAT+AGG	+	chr4_2:62841953-62841972	Msa0613920:three_prime_UTR	25.0%
!!	AGTTTTCTTCCTTTTGAATT+TGG	+	chr4_2:62842125-62842144	Msa0613920:three_prime_UTR	25.0%
!!	GTTTTCTTCCTTTTGAATTT+GGG	+	chr4_2:62842126-62842145	Msa0613920:three_prime_UTR	25.0%
!	AAAGAAATCCCAAATTCAAA+AGG	-	chr4_2:62842137-62842156	None:intergenic	25.0%
!	GAATATGTGAAGAAAATGTA+CGG	+	chr4_2:62840153-62840172	Msa0613920:CDS	25.0%
!!	AGATTCAATTCATCATCTTT+TGG	-	chr4_2:62840261-62840280	None:intergenic	25.0%
!	CTAGAAAGGTAAAAAATGAA+AGG	-	chr4_2:62840503-62840522	None:intergenic	25.0%
!!	TCTTGATATATTTCTCCTTT+TGG	+	chr4_2:62841462-62841481	Msa0613920:intron	25.0%
!	GAAGTAATAAAGGAAAATGA+TGG	-	chr4_2:62841676-62841695	None:intergenic	25.0%
!!!	AAATTTTGCTATGAGATTGA+AGG	+	chr4_2:62841801-62841820	Msa0613920:CDS	25.0%
!	ATCGTATGGAAAAAGTTAAT+AGG	+	chr4_2:62841953-62841972	Msa0613920:three_prime_UTR	25.0%
!!	AGTTTTCTTCCTTTTGAATT+TGG	+	chr4_2:62842125-62842144	Msa0613920:three_prime_UTR	25.0%
!!	GTTTTCTTCCTTTTGAATTT+GGG	+	chr4_2:62842126-62842145	Msa0613920:three_prime_UTR	25.0%
!	AAAGAAATCCCAAATTCAAA+AGG	-	chr4_2:62842137-62842156	None:intergenic	25.0%
!!	TCTTTTAAGGATGGAGAAAA+TGG	+	chr4_2:62840083-62840102	Msa0613920:exon	30.0%
!!	CTTTTAAGGATGGAGAAAAT+GGG	+	chr4_2:62840084-62840103	Msa0613920:exon	30.0%
	GATGAATTGAATCTGTATGA+TGG	+	chr4_2:62840267-62840286	Msa0613920:CDS	30.0%
	AATAGGGATAAATACTGATG+TGG	+	chr4_2:62840563-62840582	Msa0613920:intron	30.0%
	TAGTGCGTTAAATATTCCAA+AGG	-	chr4_2:62840672-62840691	None:intergenic	30.0%
!	TCATTATCTACGTTTTGTCA+AGG	-	chr4_2:62840758-62840777	None:intergenic	30.0%
!!	TTATGATATTTTGAGCTGTC+CGG	-	chr4_2:62840857-62840876	None:intergenic	30.0%
	ATGTGAAGATTGCATCATAT+GGG	-	chr4_2:62840958-62840977	None:intergenic	30.0%
	CTTCTAATTCAGCTTTACAT+TGG	-	chr4_2:62841073-62841092	None:intergenic	30.0%
!	AGGGTGATAATGTTATGTTT+CGG	-	chr4_2:62841263-62841282	None:intergenic	30.0%
	ATTGCTAAATCAGATAAGAC+TGG	+	chr4_2:62841529-62841548	Msa0613920:CDS	30.0%
	GGAATTGAGATGTTTAGATA+TGG	+	chr4_2:62841550-62841569	Msa0613920:CDS	30.0%
	TAGATATGGAGATCACATTA+TGG	+	chr4_2:62841564-62841583	Msa0613920:CDS	30.0%
	AGATATGGAGATCACATTAT+GGG	+	chr4_2:62841565-62841584	Msa0613920:CDS	30.0%
	TGAAATTTCGCTGAATAAGA+CGG	-	chr4_2:62841642-62841661	None:intergenic	30.0%
	TATTCAGCGAAATTTCATCA+CGG	+	chr4_2:62841645-62841664	Msa0613920:CDS	30.0%
!!	TTGGTGGTATATTCTAAAGT+AGG	+	chr4_2:62841929-62841948	Msa0613920:exon	30.0%
!!	ATTCTAAAGTAGGAATCGTA+TGG	+	chr4_2:62841939-62841958	Msa0613920:exon	30.0%
!!	TCTTTTAAGGATGGAGAAAA+TGG	+	chr4_2:62840083-62840102	Msa0613920:exon	30.0%
!!	CTTTTAAGGATGGAGAAAAT+GGG	+	chr4_2:62840084-62840103	Msa0613920:exon	30.0%
	GATGAATTGAATCTGTATGA+TGG	+	chr4_2:62840267-62840286	Msa0613920:CDS	30.0%
	AATAGGGATAAATACTGATG+TGG	+	chr4_2:62840563-62840582	Msa0613920:intron	30.0%
	TAGTGCGTTAAATATTCCAA+AGG	-	chr4_2:62840672-62840691	None:intergenic	30.0%
!	TCATTATCTACGTTTTGTCA+AGG	-	chr4_2:62840758-62840777	None:intergenic	30.0%
!!	TTATGATATTTTGAGCTGTC+CGG	-	chr4_2:62840857-62840876	None:intergenic	30.0%
	ATGTGAAGATTGCATCATAT+GGG	-	chr4_2:62840958-62840977	None:intergenic	30.0%
	CTTCTAATTCAGCTTTACAT+TGG	-	chr4_2:62841073-62841092	None:intergenic	30.0%
!	AGGGTGATAATGTTATGTTT+CGG	-	chr4_2:62841263-62841282	None:intergenic	30.0%
	ATTGCTAAATCAGATAAGAC+TGG	+	chr4_2:62841529-62841548	Msa0613920:CDS	30.0%
	GGAATTGAGATGTTTAGATA+TGG	+	chr4_2:62841550-62841569	Msa0613920:CDS	30.0%
	TAGATATGGAGATCACATTA+TGG	+	chr4_2:62841564-62841583	Msa0613920:CDS	30.0%
	AGATATGGAGATCACATTAT+GGG	+	chr4_2:62841565-62841584	Msa0613920:CDS	30.0%
	TGAAATTTCGCTGAATAAGA+CGG	-	chr4_2:62841642-62841661	None:intergenic	30.0%
	TATTCAGCGAAATTTCATCA+CGG	+	chr4_2:62841645-62841664	Msa0613920:CDS	30.0%
!!	TTGGTGGTATATTCTAAAGT+AGG	+	chr4_2:62841929-62841948	Msa0613920:exon	30.0%
!!	ATTCTAAAGTAGGAATCGTA+TGG	+	chr4_2:62841939-62841958	Msa0613920:exon	30.0%
!	GAGAGAAAGGGAATTGTTTT+TGG	-	chr4_2:62839966-62839985	None:intergenic	35.0%
!!	TTTTAGAGAGAGAAAGTGCA+AGG	-	chr4_2:62840006-62840025	None:intergenic	35.0%
!!	TTTTTGATTCTGGGTTTCTC+CGG	-	chr4_2:62840058-62840077	None:intergenic	35.0%
	TATGTGAAGAAAATGTACGG+AGG	+	chr4_2:62840156-62840175	Msa0613920:CDS	35.0%
	ATGTGAAGAAAATGTACGGA+GGG	+	chr4_2:62840157-62840176	Msa0613920:CDS	35.0%
!!!	AAAATGTACGGAGGGTATTT+TGG	+	chr4_2:62840165-62840184	Msa0613920:CDS	35.0%
!!!	AAATGTACGGAGGGTATTTT+GGG	+	chr4_2:62840166-62840185	Msa0613920:CDS	35.0%
!!!	TATGATGGTTTTGTGATCAC+TGG	+	chr4_2:62840282-62840301	Msa0613920:CDS	35.0%
	ATGCACATGGAAATGATACA+TGG	+	chr4_2:62840316-62840335	Msa0613920:CDS	35.0%
	TGCACATGGAAATGATACAT+GGG	+	chr4_2:62840317-62840336	Msa0613920:CDS	35.0%
	GACATGAACAAGAAAATCCT+TGG	+	chr4_2:62840375-62840394	Msa0613920:CDS	35.0%
	AAAATCCTTGGCATTTGCTT+TGG	+	chr4_2:62840387-62840406	Msa0613920:CDS	35.0%
	ACCTTAGAAATTCTTAGGAC+TGG	+	chr4_2:62840638-62840657	Msa0613920:intron	35.0%
	ACCAGTCCTAAGAATTTCTA+AGG	-	chr4_2:62840642-62840661	None:intergenic	35.0%
!	CGTTACTTTAGTTGTTCGTT+TGG	+	chr4_2:62840783-62840802	Msa0613920:intron	35.0%
	ATCACACTTGTCTATATGCA+TGG	+	chr4_2:62840932-62840951	Msa0613920:intron	35.0%
	CATGTGAAGATTGCATCATA+TGG	-	chr4_2:62840959-62840978	None:intergenic	35.0%
	CTTTACGTTACGACATGATA+TGG	+	chr4_2:62840984-62841003	Msa0613920:intron	35.0%
	TTTCCATTATTCAATGCCAC+AGG	+	chr4_2:62841325-62841344	Msa0613920:CDS	35.0%
	TTCCATTATTCAATGCCACA+GGG	+	chr4_2:62841326-62841345	Msa0613920:CDS	35.0%
!!	AGAATGTCTTTAGAGTACTC+AGG	-	chr4_2:62841604-62841623	None:intergenic	35.0%
!	TTACTGGCTAATGTAATGAC+AGG	+	chr4_2:62841777-62841796	Msa0613920:intron	35.0%
	GGTCGTTATTGTGAAAGAAA+TGG	+	chr4_2:62841889-62841908	Msa0613920:CDS	35.0%
	TAAGAAAATGTAGAAAGGCG+TGG	+	chr4_2:62842160-62842179	Msa0613920:three_prime_UTR	35.0%
!	GAGAGAAAGGGAATTGTTTT+TGG	-	chr4_2:62839966-62839985	None:intergenic	35.0%
!!	TTTTAGAGAGAGAAAGTGCA+AGG	-	chr4_2:62840006-62840025	None:intergenic	35.0%
!!	TTTTTGATTCTGGGTTTCTC+CGG	-	chr4_2:62840058-62840077	None:intergenic	35.0%
	TATGTGAAGAAAATGTACGG+AGG	+	chr4_2:62840156-62840175	Msa0613920:CDS	35.0%
	ATGTGAAGAAAATGTACGGA+GGG	+	chr4_2:62840157-62840176	Msa0613920:CDS	35.0%
!!!	AAAATGTACGGAGGGTATTT+TGG	+	chr4_2:62840165-62840184	Msa0613920:CDS	35.0%
!!!	AAATGTACGGAGGGTATTTT+GGG	+	chr4_2:62840166-62840185	Msa0613920:CDS	35.0%
!!!	TATGATGGTTTTGTGATCAC+TGG	+	chr4_2:62840282-62840301	Msa0613920:CDS	35.0%
	ATGCACATGGAAATGATACA+TGG	+	chr4_2:62840316-62840335	Msa0613920:CDS	35.0%
	TGCACATGGAAATGATACAT+GGG	+	chr4_2:62840317-62840336	Msa0613920:CDS	35.0%
	GACATGAACAAGAAAATCCT+TGG	+	chr4_2:62840375-62840394	Msa0613920:CDS	35.0%
	AAAATCCTTGGCATTTGCTT+TGG	+	chr4_2:62840387-62840406	Msa0613920:CDS	35.0%
	ACCTTAGAAATTCTTAGGAC+TGG	+	chr4_2:62840638-62840657	Msa0613920:intron	35.0%
	ACCAGTCCTAAGAATTTCTA+AGG	-	chr4_2:62840642-62840661	None:intergenic	35.0%
!	CGTTACTTTAGTTGTTCGTT+TGG	+	chr4_2:62840783-62840802	Msa0613920:intron	35.0%
	ATCACACTTGTCTATATGCA+TGG	+	chr4_2:62840932-62840951	Msa0613920:intron	35.0%
	CATGTGAAGATTGCATCATA+TGG	-	chr4_2:62840959-62840978	None:intergenic	35.0%
	CTTTACGTTACGACATGATA+TGG	+	chr4_2:62840984-62841003	Msa0613920:intron	35.0%
	TTTCCATTATTCAATGCCAC+AGG	+	chr4_2:62841325-62841344	Msa0613920:CDS	35.0%
	TTCCATTATTCAATGCCACA+GGG	+	chr4_2:62841326-62841345	Msa0613920:CDS	35.0%
!!	AGAATGTCTTTAGAGTACTC+AGG	-	chr4_2:62841604-62841623	None:intergenic	35.0%
!	TTACTGGCTAATGTAATGAC+AGG	+	chr4_2:62841777-62841796	Msa0613920:intron	35.0%
	GGTCGTTATTGTGAAAGAAA+TGG	+	chr4_2:62841889-62841908	Msa0613920:CDS	35.0%
	TAAGAAAATGTAGAAAGGCG+TGG	+	chr4_2:62842160-62842179	Msa0613920:three_prime_UTR	35.0%
	GAGAGATTGAGAGAGAGAAA+GGG	-	chr4_2:62839978-62839997	None:intergenic	40.0%
	AGAGAGATTGAGAGAGAGAA+AGG	-	chr4_2:62839979-62839998	None:intergenic	40.0%
	TTAAGGATGGAGAAAATGGG+TGG	+	chr4_2:62840087-62840106	Msa0613920:exon	40.0%
	TAAGGATGGAGAAAATGGGT+GGG	+	chr4_2:62840088-62840107	Msa0613920:exon	40.0%
!!!	AATGTACGGAGGGTATTTTG+GGG	+	chr4_2:62840167-62840186	Msa0613920:CDS	40.0%
!	TGGGGTATTTGTGAGAATGT+TGG	+	chr4_2:62840185-62840204	Msa0613920:CDS	40.0%
	GGTATTTGTGAGAATGTTGG+AGG	+	chr4_2:62840188-62840207	Msa0613920:CDS	40.0%
	TGAAAGCTGGGATGTGTATA+AGG	+	chr4_2:62840218-62840237	Msa0613920:CDS	40.0%
	TAACTAACAGCTTGACGTGT+CGG	+	chr4_2:62840593-62840612	Msa0613920:intron	40.0%
	TCAAGAGAAGACAAAGGAGA+TGG	-	chr4_2:62841291-62841310	None:intergenic	40.0%
	GGAAGTTCAAGAGAAGACAA+AGG	-	chr4_2:62841297-62841316	None:intergenic	40.0%
!	TGAATAATGGAAAGCCTCGT+TGG	-	chr4_2:62841318-62841337	None:intergenic	40.0%
!	ATCCCTGTGGCATTGAATAA+TGG	-	chr4_2:62841331-62841350	None:intergenic	40.0%
	TTTAGCAATCACTTCAGCCT+TGG	-	chr4_2:62841518-62841537	None:intergenic	40.0%
	GATCACATTATGGGAATCCA+AGG	+	chr4_2:62841574-62841593	Msa0613920:CDS	40.0%
	TGCTATGAGATTGAAGGAGA+AGG	+	chr4_2:62841807-62841826	Msa0613920:CDS	40.0%
	TTTCACAATAACGACCCTTG+AGG	-	chr4_2:62841885-62841904	None:intergenic	40.0%
	TGTGCCACACCTTAATTAGT+GGG	-	chr4_2:62841993-62842012	None:intergenic	40.0%
	ATGTGCCACACCTTAATTAG+TGG	-	chr4_2:62841994-62842013	None:intergenic	40.0%
	GAGAGATTGAGAGAGAGAAA+GGG	-	chr4_2:62839978-62839997	None:intergenic	40.0%
	AGAGAGATTGAGAGAGAGAA+AGG	-	chr4_2:62839979-62839998	None:intergenic	40.0%
	TTAAGGATGGAGAAAATGGG+TGG	+	chr4_2:62840087-62840106	Msa0613920:exon	40.0%
	TAAGGATGGAGAAAATGGGT+GGG	+	chr4_2:62840088-62840107	Msa0613920:exon	40.0%
!!!	AATGTACGGAGGGTATTTTG+GGG	+	chr4_2:62840167-62840186	Msa0613920:CDS	40.0%
!	TGGGGTATTTGTGAGAATGT+TGG	+	chr4_2:62840185-62840204	Msa0613920:CDS	40.0%
	GGTATTTGTGAGAATGTTGG+AGG	+	chr4_2:62840188-62840207	Msa0613920:CDS	40.0%
	TGAAAGCTGGGATGTGTATA+AGG	+	chr4_2:62840218-62840237	Msa0613920:CDS	40.0%
	TAACTAACAGCTTGACGTGT+CGG	+	chr4_2:62840593-62840612	Msa0613920:intron	40.0%
	TCAAGAGAAGACAAAGGAGA+TGG	-	chr4_2:62841291-62841310	None:intergenic	40.0%
	GGAAGTTCAAGAGAAGACAA+AGG	-	chr4_2:62841297-62841316	None:intergenic	40.0%
!	TGAATAATGGAAAGCCTCGT+TGG	-	chr4_2:62841318-62841337	None:intergenic	40.0%
!	ATCCCTGTGGCATTGAATAA+TGG	-	chr4_2:62841331-62841350	None:intergenic	40.0%
	TTTAGCAATCACTTCAGCCT+TGG	-	chr4_2:62841518-62841537	None:intergenic	40.0%
	GATCACATTATGGGAATCCA+AGG	+	chr4_2:62841574-62841593	Msa0613920:CDS	40.0%
	TGCTATGAGATTGAAGGAGA+AGG	+	chr4_2:62841807-62841826	Msa0613920:CDS	40.0%
	TTTCACAATAACGACCCTTG+AGG	-	chr4_2:62841885-62841904	None:intergenic	40.0%
	TGTGCCACACCTTAATTAGT+GGG	-	chr4_2:62841993-62842012	None:intergenic	40.0%
	ATGTGCCACACCTTAATTAG+TGG	-	chr4_2:62841994-62842013	None:intergenic	40.0%
!	TAGAGAGAGAAAGTGCAAGG+TGG	-	chr4_2:62840003-62840022	None:intergenic	45.0%
!!	TTAGAGGGAGAAAGCATCAC+CGG	+	chr4_2:62840036-62840055	Msa0613920:five_prime_UTR	45.0%
	GTGAGAATGTTGGAGGAAGA+AGG	+	chr4_2:62840195-62840214	Msa0613920:CDS	45.0%
	AAGCTGGGATGTGTATAAGG+TGG	+	chr4_2:62840221-62840240	Msa0613920:CDS	45.0%
	GGTAGTTGTAGTGATGCACA+TGG	+	chr4_2:62840303-62840322	Msa0613920:CDS	45.0%
	GATGACCAAAGCAAATGCCA+AGG	-	chr4_2:62840395-62840414	None:intergenic	45.0%
	TGGCATTTGCTTTGGTCATC+AGG	+	chr4_2:62840395-62840414	Msa0613920:CDS	45.0%
	TAGATACTTGGCCGTGCAAT+TGG	+	chr4_2:62841195-62841214	Msa0613920:intron	45.0%
	GACAAAGGAGATGGCAAAGA+GGG	-	chr4_2:62841282-62841301	None:intergenic	45.0%
	AGACAAAGGAGATGGCAAAG+AGG	-	chr4_2:62841283-62841302	None:intergenic	45.0%
	CTTCTCTTGAACTTCCAACG+AGG	+	chr4_2:62841301-62841320	Msa0613920:CDS	45.0%
	TATTCAATGCCACAGGGATG+AGG	+	chr4_2:62841332-62841351	Msa0613920:CDS	45.0%
!	TAGAGTACTCAGGATGACCT+TGG	-	chr4_2:62841594-62841613	None:intergenic	45.0%
	ATGAGATTGAAGGAGAAGGC+TGG	+	chr4_2:62841811-62841830	Msa0613920:CDS	45.0%
	ACTATGCATCAGCTTCCTCA+AGG	+	chr4_2:62841867-62841886	Msa0613920:CDS	45.0%
	CTATGCATCAGCTTCCTCAA+GGG	+	chr4_2:62841868-62841887	Msa0613920:CDS	45.0%
!!	AAGGGTACCCCCACTAATTA+AGG	+	chr4_2:62841981-62842000	Msa0613920:three_prime_UTR	45.0%
	TACCCCCACTAATTAAGGTG+TGG	+	chr4_2:62841986-62842005	Msa0613920:three_prime_UTR	45.0%
	TGCCACACCTTAATTAGTGG+GGG	-	chr4_2:62841991-62842010	None:intergenic	45.0%
	GTGCCACACCTTAATTAGTG+GGG	-	chr4_2:62841992-62842011	None:intergenic	45.0%
	AACACATGCATCTAGCTAGC+TGG	-	chr4_2:62842020-62842039	None:intergenic	45.0%
!	TAGAGAGAGAAAGTGCAAGG+TGG	-	chr4_2:62840003-62840022	None:intergenic	45.0%
!!	TTAGAGGGAGAAAGCATCAC+CGG	+	chr4_2:62840036-62840055	Msa0613920:five_prime_UTR	45.0%
	GTGAGAATGTTGGAGGAAGA+AGG	+	chr4_2:62840195-62840214	Msa0613920:CDS	45.0%
	AAGCTGGGATGTGTATAAGG+TGG	+	chr4_2:62840221-62840240	Msa0613920:CDS	45.0%
	GGTAGTTGTAGTGATGCACA+TGG	+	chr4_2:62840303-62840322	Msa0613920:CDS	45.0%
	GATGACCAAAGCAAATGCCA+AGG	-	chr4_2:62840395-62840414	None:intergenic	45.0%
	TGGCATTTGCTTTGGTCATC+AGG	+	chr4_2:62840395-62840414	Msa0613920:CDS	45.0%
	TAGATACTTGGCCGTGCAAT+TGG	+	chr4_2:62841195-62841214	Msa0613920:intron	45.0%
	GACAAAGGAGATGGCAAAGA+GGG	-	chr4_2:62841282-62841301	None:intergenic	45.0%
	AGACAAAGGAGATGGCAAAG+AGG	-	chr4_2:62841283-62841302	None:intergenic	45.0%
	CTTCTCTTGAACTTCCAACG+AGG	+	chr4_2:62841301-62841320	Msa0613920:CDS	45.0%
	TATTCAATGCCACAGGGATG+AGG	+	chr4_2:62841332-62841351	Msa0613920:CDS	45.0%
!	TAGAGTACTCAGGATGACCT+TGG	-	chr4_2:62841594-62841613	None:intergenic	45.0%
	ATGAGATTGAAGGAGAAGGC+TGG	+	chr4_2:62841811-62841830	Msa0613920:CDS	45.0%
	ACTATGCATCAGCTTCCTCA+AGG	+	chr4_2:62841867-62841886	Msa0613920:CDS	45.0%
	CTATGCATCAGCTTCCTCAA+GGG	+	chr4_2:62841868-62841887	Msa0613920:CDS	45.0%
!!	AAGGGTACCCCCACTAATTA+AGG	+	chr4_2:62841981-62842000	Msa0613920:three_prime_UTR	45.0%
	TACCCCCACTAATTAAGGTG+TGG	+	chr4_2:62841986-62842005	Msa0613920:three_prime_UTR	45.0%
	TGCCACACCTTAATTAGTGG+GGG	-	chr4_2:62841991-62842010	None:intergenic	45.0%
	GTGCCACACCTTAATTAGTG+GGG	-	chr4_2:62841992-62842011	None:intergenic	45.0%
	AACACATGCATCTAGCTAGC+TGG	-	chr4_2:62842020-62842039	None:intergenic	45.0%
	ATGGAGAAAATGGGTGGGAG+TGG	+	chr4_2:62840093-62840112	Msa0613920:CDS	50.0%
	TGGAGAAAATGGGTGGGAGT+GGG	+	chr4_2:62840094-62840113	Msa0613920:CDS	50.0%
	GTGGGAGTGGGAAGAGATTT+GGG	+	chr4_2:62840106-62840125	Msa0613920:CDS	50.0%
	TGGGAGTGGGAAGAGATTTG+GGG	+	chr4_2:62840107-62840126	Msa0613920:CDS	50.0%
	TGGAGGAAGAAGGTGAAAGC+TGG	+	chr4_2:62840205-62840224	Msa0613920:CDS	50.0%
	GGAGGAAGAAGGTGAAAGCT+GGG	+	chr4_2:62840206-62840225	Msa0613920:CDS	50.0%
!!	AGGACTGGTTCTCTCTCCTT+TGG	+	chr4_2:62840653-62840672	Msa0613920:intron	50.0%
	ATACTTGGCCGTGCAATTGG+AGG	+	chr4_2:62841198-62841217	Msa0613920:CDS	50.0%
	TACTTGGCCGTGCAATTGGA+GGG	+	chr4_2:62841199-62841218	Msa0613920:CDS	50.0%
	TCACCTTCCCTCCAATTGCA+CGG	-	chr4_2:62841209-62841228	None:intergenic	50.0%
	AAGGTGACTCGATCTCCAAC+TGG	+	chr4_2:62841222-62841241	Msa0613920:CDS	50.0%
	TGAAGGAGAAGGCTGGTATG+TGG	+	chr4_2:62841818-62841837	Msa0613920:CDS	50.0%
	GAAGGAGAAGGCTGGTATGT+GGG	+	chr4_2:62841819-62841838	Msa0613920:CDS	50.0%
	TGGTATGTGGGAGCCAGATA+AGG	+	chr4_2:62841831-62841850	Msa0613920:CDS	50.0%
	TATGTGGGAGCCAGATAAGG+AGG	+	chr4_2:62841834-62841853	Msa0613920:CDS	50.0%
	CTCTTCCATGCCTCCTTATC+TGG	-	chr4_2:62841847-62841866	None:intergenic	50.0%
	ATGGAGAAAATGGGTGGGAG+TGG	+	chr4_2:62840093-62840112	Msa0613920:CDS	50.0%
	TGGAGAAAATGGGTGGGAGT+GGG	+	chr4_2:62840094-62840113	Msa0613920:CDS	50.0%
	GTGGGAGTGGGAAGAGATTT+GGG	+	chr4_2:62840106-62840125	Msa0613920:CDS	50.0%
	TGGGAGTGGGAAGAGATTTG+GGG	+	chr4_2:62840107-62840126	Msa0613920:CDS	50.0%
	TGGAGGAAGAAGGTGAAAGC+TGG	+	chr4_2:62840205-62840224	Msa0613920:CDS	50.0%
	GGAGGAAGAAGGTGAAAGCT+GGG	+	chr4_2:62840206-62840225	Msa0613920:CDS	50.0%
!!	AGGACTGGTTCTCTCTCCTT+TGG	+	chr4_2:62840653-62840672	Msa0613920:intron	50.0%
	ATACTTGGCCGTGCAATTGG+AGG	+	chr4_2:62841198-62841217	Msa0613920:CDS	50.0%
	TACTTGGCCGTGCAATTGGA+GGG	+	chr4_2:62841199-62841218	Msa0613920:CDS	50.0%
	TCACCTTCCCTCCAATTGCA+CGG	-	chr4_2:62841209-62841228	None:intergenic	50.0%
	AAGGTGACTCGATCTCCAAC+TGG	+	chr4_2:62841222-62841241	Msa0613920:CDS	50.0%
	TGAAGGAGAAGGCTGGTATG+TGG	+	chr4_2:62841818-62841837	Msa0613920:CDS	50.0%
	GAAGGAGAAGGCTGGTATGT+GGG	+	chr4_2:62841819-62841838	Msa0613920:CDS	50.0%
	TGGTATGTGGGAGCCAGATA+AGG	+	chr4_2:62841831-62841850	Msa0613920:CDS	50.0%
	TATGTGGGAGCCAGATAAGG+AGG	+	chr4_2:62841834-62841853	Msa0613920:CDS	50.0%
	CTCTTCCATGCCTCCTTATC+TGG	-	chr4_2:62841847-62841866	None:intergenic	50.0%
	GGTGGGAGTGGGAAGAGATT+TGG	+	chr4_2:62840105-62840124	Msa0613920:CDS	55.0%
	GATGTGTATAAGGTGGCGCG+TGG	+	chr4_2:62840228-62840247	Msa0613920:CDS	55.0%
	TGACTCGATCTCCAACTGGC+TGG	+	chr4_2:62841226-62841245	Msa0613920:CDS	55.0%
	GACTCGATCTCCAACTGGCT+GGG	+	chr4_2:62841227-62841246	Msa0613920:CDS	55.0%
	TCTCCAACTGGCTGGGACAT+TGG	+	chr4_2:62841234-62841253	Msa0613920:CDS	55.0%
	ACACCAATGTCCCAGCCAGT+TGG	-	chr4_2:62841240-62841259	None:intergenic	55.0%
	ACACACACACCTCATCCCTG+TGG	-	chr4_2:62841344-62841363	None:intergenic	55.0%
	GCTAAGAGAGCTACCTGCCA+AGG	+	chr4_2:62841498-62841517	Msa0613920:intron	55.0%
	GCAATCACTTCAGCCTTGGC+AGG	-	chr4_2:62841514-62841533	None:intergenic	55.0%
	GGTGGGAGTGGGAAGAGATT+TGG	+	chr4_2:62840105-62840124	Msa0613920:CDS	55.0%
	GATGTGTATAAGGTGGCGCG+TGG	+	chr4_2:62840228-62840247	Msa0613920:CDS	55.0%
	TGACTCGATCTCCAACTGGC+TGG	+	chr4_2:62841226-62841245	Msa0613920:CDS	55.0%
	GACTCGATCTCCAACTGGCT+GGG	+	chr4_2:62841227-62841246	Msa0613920:CDS	55.0%
	TCTCCAACTGGCTGGGACAT+TGG	+	chr4_2:62841234-62841253	Msa0613920:CDS	55.0%
	ACACCAATGTCCCAGCCAGT+TGG	-	chr4_2:62841240-62841259	None:intergenic	55.0%
	ACACACACACCTCATCCCTG+TGG	-	chr4_2:62841344-62841363	None:intergenic	55.0%
	GCTAAGAGAGCTACCTGCCA+AGG	+	chr4_2:62841498-62841517	Msa0613920:intron	55.0%
	GCAATCACTTCAGCCTTGGC+AGG	-	chr4_2:62841514-62841533	None:intergenic	55.0%
	TGGCCGTGCAATTGGAGGGA+AGG	+	chr4_2:62841203-62841222	Msa0613920:CDS	60.0%
	GGGAGCCAGATAAGGAGGCA+TGG	+	chr4_2:62841839-62841858	Msa0613920:CDS	60.0%
	TGGCCGTGCAATTGGAGGGA+AGG	+	chr4_2:62841203-62841222	Msa0613920:CDS	60.0%
	GGGAGCCAGATAAGGAGGCA+TGG	+	chr4_2:62841839-62841858	Msa0613920:CDS	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4_2	gene	62839942	62842225	62839942	ID=Msa0613920;Name=Msa0613920
chr4_2	mRNA	62839942	62842225	62839942	ID=Msa0613920-mRNA-1;Parent=Msa0613920;Name=Msa0613920-mRNA-1;_AED=0.12;_eAED=0.12;_QI=151\|1\|1\|1\|1\|1\|4\|280\|264
chr4_2	exon	62839942	62840416	62839942	ID=Msa0613920-mRNA-1:exon:17374;Parent=Msa0613920-mRNA-1
chr4_2	exon	62841198	62841353	62841198	ID=Msa0613920-mRNA-1:exon:17375;Parent=Msa0613920-mRNA-1
chr4_2	exon	62841499	62841666	62841499	ID=Msa0613920-mRNA-1:exon:17376;Parent=Msa0613920-mRNA-1
chr4_2	exon	62841799	62842225	62841799	ID=Msa0613920-mRNA-1:exon:17377;Parent=Msa0613920-mRNA-1
chr4_2	five_prime_UTR	62839942	62840092	62839942	ID=Msa0613920-mRNA-1:five_prime_utr;Parent=Msa0613920-mRNA-1
chr4_2	CDS	62840093	62840416	62840093	ID=Msa0613920-mRNA-1:cds;Parent=Msa0613920-mRNA-1
chr4_2	CDS	62841198	62841353	62841198	ID=Msa0613920-mRNA-1:cds;Parent=Msa0613920-mRNA-1
chr4_2	CDS	62841499	62841666	62841499	ID=Msa0613920-mRNA-1:cds;Parent=Msa0613920-mRNA-1
chr4_2	CDS	62841799	62841945	62841799	ID=Msa0613920-mRNA-1:cds;Parent=Msa0613920-mRNA-1
chr4_2	three_prime_UTR	62841946	62842225	62841946	ID=Msa0613920-mRNA-1:three_prime_utr;Parent=Msa0613920-mRNA-1

Gene Sequence

>Msa0613920

ATGGAGAAAATGGGTGGGAGTGGGAAGAGATTTGGGGTGTTGTTATGTGCAGATGATTCAGAATATGTGAAGAAAATGTACGGAGGGTATTTTGGGGTATTTGTGAGAATGTTGGAGGAAGAAGGTGAAAGCTGGGATGTGTATAAGGTGGCGCGTGGAGAGTTTCCAAAAGATGATGAATTGAATCTGTATGATGGTTTTGTGATCACTGGTAGTTGTAGTGATGCACATGGAAATGATACATGGGTCTCTCAACTTCTCAATTTGCTTAAGAAATTGAATGACATGAACAAGAAAATCCTTGGCATTTGCTTTGGTCATCAGATACTTGGCCGTGCAATTGGAGGGAAGGTGACTCGATCTCCAACTGGCTGGGACATTGGTGTCCGAAACATAACATTATCACCCTCTTTGCCATCTCCTTTGTCTTCTCTTGAACTTCCAACGAGGCTTTCCATTATTCAATGCCACAGGGATGAGCTAAGAGAGCTACCTGCCAAGGCTGAAGTGATTGCTAAATCAGATAAGACTGGAATTGAGATGTTTAGATATGGAGATCACATTATGGGAATCCAAGGTCATCCTGAGTACTCTAAAGACATTCTTTTGAACATTATCGACCGTCTTATTCAGCGAAATTTCATCACGGAAAATTTTGCTATGAGATTGAAGGAGAAGGCTGGTATGTGGGAGCCAGATAAGGAGGCATGGAAGAGACTATGCATCAGCTTCCTCAAGGGTCGTTATTGTGAAAGAAATGGAATAGAAAATATAAATATTGGTGGTATATTCTAA

Protein sequence

>Msa0613920

MEKMGGSGKRFGVLLCADDSEYVKKMYGGYFGVFVRMLEEEGESWDVYKVARGEFPKDDELNLYDGFVITGSCSDAHGNDTWVSQLLNLLKKLNDMNKKILGICFGHQILGRAIGGKVTRSPTGWDIGVRNITLSPSLPSPLSSLELPTRLSIIQCHRDELRELPAKAEVIAKSDKTGIEMFRYGDHIMGIQGHPEYSKDILLNIIDRLIQRNFITENFAMRLKEKAGMWEPDKEAWKRLCISFLKGRYCERNGIENINIGGIF*