Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315580 | XP_003627464.1 | 95.528 | 246 | 5 | 2 | 1 | 245 | 1 | 241 | 5.41e-172 | 483 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315580 | sp|Q9SHI7|UBC34_ARATH | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.03e-135 | 383 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315580 | B7FML7 | 95.528 | 246 | 5 | 2 | 1 | 245 | 1 | 241 | 2.59e-172 | 483 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0020410 | Msa1315580 | 0.812133 | 4.941652e-51 | -8.615850e-47 |
| Msa0023330 | Msa1315580 | 0.812915 | 3.333469e-51 | -8.615850e-47 |
| Msa0030700 | Msa1315580 | 0.804108 | 2.530685e-49 | -8.615850e-47 |
| Msa0071250 | Msa1315580 | 0.806078 | 9.796975e-50 | -8.615850e-47 |
| Msa0104670 | Msa1315580 | 0.809819 | 1.567346e-50 | -8.615850e-47 |
| Msa0106620 | Msa1315580 | 0.822759 | 1.994558e-53 | -8.615850e-47 |
| Msa0106710 | Msa1315580 | 0.821958 | 3.060854e-53 | -8.615850e-47 |
| Msa0117520 | Msa1315580 | 0.812764 | 3.596947e-51 | -8.615850e-47 |
| Msa0604290 | Msa1315580 | 0.804426 | 2.172131e-49 | -8.615850e-47 |
| Msa0613110 | Msa1315580 | 0.828593 | 8.247898e-55 | -8.615850e-47 |
| Msa0647030 | Msa1315580 | 0.800024 | 1.749965e-48 | -8.615850e-47 |
| Msa0705990 | Msa1315580 | 0.809484 | 1.850028e-50 | -8.615850e-47 |
| Msa0709120 | Msa1315580 | 0.816162 | 6.374244e-52 | -8.615850e-47 |
| Msa0711150 | Msa1315580 | 0.813171 | 2.928984e-51 | -8.615850e-47 |
| Msa0724170 | Msa1315580 | 0.835250 | 1.871424e-56 | -8.615850e-47 |
| Msa0733010 | Msa1315580 | 0.808328 | 3.268530e-50 | -8.615850e-47 |
| Msa0738030 | Msa1315580 | 0.822911 | 1.838971e-53 | -8.615850e-47 |
| Msa0749440 | Msa1315580 | 0.807547 | 4.791482e-50 | -8.615850e-47 |
| Msa0750850 | Msa1315580 | 0.818374 | 2.026989e-52 | -8.615850e-47 |
| Msa0751850 | Msa1315580 | 0.800535 | 1.377237e-48 | -8.615850e-47 |
| Msa0763890 | Msa1315580 | 0.812859 | 3.430148e-51 | -8.615850e-47 |
| Msa0763920 | Msa1315580 | 0.825360 | 4.891270e-54 | -8.615850e-47 |
| Msa0784480 | Msa1315580 | 0.807530 | 4.831405e-50 | -8.615850e-47 |
| Msa0797250 | Msa1315580 | 0.801124 | 1.043921e-48 | -8.615850e-47 |
| Msa0822500 | Msa1315580 | 0.815138 | 1.077786e-51 | -8.615850e-47 |
| Msa0138020 | Msa1315580 | 0.807857 | 4.117655e-50 | -8.615850e-47 |
| Msa0139670 | Msa1315580 | 0.817327 | 3.492713e-52 | -8.615850e-47 |
| Msa0144530 | Msa1315580 | 0.809826 | 1.561789e-50 | -8.615850e-47 |
| Msa0150230 | Msa1315580 | 0.805986 | 1.024316e-49 | -8.615850e-47 |
| Msa0160960 | Msa1315580 | 0.805794 | 1.123981e-49 | -8.615850e-47 |
| Msa0173800 | Msa1315580 | 0.802176 | 6.352554e-49 | -8.615850e-47 |
| Msa0186950 | Msa1315580 | 0.804760 | 1.850357e-49 | -8.615850e-47 |
| Msa0197610 | Msa1315580 | 0.806654 | 7.404631e-50 | -8.615850e-47 |
| Msa0206830 | Msa1315580 | 0.822335 | 2.502981e-53 | -8.615850e-47 |
| Msa0207040 | Msa1315580 | -0.810360 | 1.198411e-50 | -8.615850e-47 |
| Msa0217700 | Msa1315580 | 0.804888 | 1.739791e-49 | -8.615850e-47 |
| Msa0218370 | Msa1315580 | 0.805808 | 1.116257e-49 | -8.615850e-47 |
| Msa0219590 | Msa1315580 | 0.809279 | 2.046590e-50 | -8.615850e-47 |
| Msa0220730 | Msa1315580 | 0.807610 | 4.646239e-50 | -8.615850e-47 |
| Msa0232020 | Msa1315580 | 0.800555 | 1.364272e-48 | -8.615850e-47 |
| Msa1271130 | Msa1315580 | 0.836528 | 8.879259e-57 | -8.615850e-47 |
| Msa1283740 | Msa1315580 | 0.812234 | 4.697764e-51 | -8.615850e-47 |
| Msa1315580 | Msa1332050 | 0.800490 | 1.406687e-48 | -8.615850e-47 |
| Msa1315580 | Msa1345810 | 0.815477 | 9.061590e-52 | -8.615850e-47 |
| Msa1315580 | Msa1346660 | 0.805503 | 1.293434e-49 | -8.615850e-47 |
| Msa1315580 | Msa1346840 | 0.811251 | 7.684958e-51 | -8.615850e-47 |
| Msa1315580 | Msa1349450 | 0.800313 | 1.527955e-48 | -8.615850e-47 |
| Msa1315580 | Msa1355890 | 0.817726 | 2.839544e-52 | -8.615850e-47 |
| Msa1315580 | Msa1371940 | 0.802188 | 6.314763e-49 | -8.615850e-47 |
| Msa1315580 | Msa1392210 | 0.832839 | 7.519370e-56 | -8.615850e-47 |
| Msa1315580 | Msa1412130 | 0.812527 | 4.053664e-51 | -8.615850e-47 |
| Msa1315580 | Msa1425260 | 0.810637 | 1.044053e-50 | -8.615850e-47 |
| Msa1315580 | Msa1442920 | 0.804410 | 2.189265e-49 | -8.615850e-47 |
| Msa1315580 | Msa1458680 | 0.803544 | 3.314607e-49 | -8.615850e-47 |
| Msa0381610 | Msa1315580 | -0.801115 | 1.048263e-48 | -8.615850e-47 |
| Msa0382370 | Msa1315580 | 0.833033 | 6.729238e-56 | -8.615850e-47 |
| Msa0403770 | Msa1315580 | 0.804714 | 1.892281e-49 | -8.615850e-47 |
| Msa0414140 | Msa1315580 | 0.802788 | 4.751011e-49 | -8.615850e-47 |
| Msa0432160 | Msa1315580 | 0.837413 | 5.275310e-57 | -8.615850e-47 |
| Msa0450400 | Msa1315580 | -0.828879 | 7.033985e-55 | -8.615850e-47 |
| Msa0455760 | Msa1315580 | 0.801969 | 7.005185e-49 | -8.615850e-47 |
| Msa0470880 | Msa1315580 | 0.802735 | 4.872584e-49 | -8.615850e-47 |
| Msa0476680 | Msa1315580 | 0.841331 | 5.069846e-58 | -8.615850e-47 |
| Msa0992580 | Msa1315580 | 0.808401 | 3.153359e-50 | -8.615850e-47 |
| Msa1024680 | Msa1315580 | 0.826584 | 2.504242e-54 | -8.615850e-47 |
| Msa1034500 | Msa1315580 | 0.807424 | 5.089294e-50 | -8.615850e-47 |
| Msa1036610 | Msa1315580 | 0.833970 | 3.926976e-56 | -8.615850e-47 |
| Msa1063420 | Msa1315580 | 0.813665 | 2.281866e-51 | -8.615850e-47 |
| Msa1089450 | Msa1315580 | 0.801983 | 6.959411e-49 | -8.615850e-47 |
| Msa1093100 | Msa1315580 | 0.813802 | 2.128603e-51 | -8.615850e-47 |
| Msa1094190 | Msa1315580 | 0.808402 | 3.151827e-50 | -8.615850e-47 |
| Msa1104560 | Msa1315580 | 0.801599 | 8.345099e-49 | -8.615850e-47 |
| Msa0241140 | Msa1315580 | 0.848928 | 4.482612e-60 | -8.615850e-47 |
| Msa0257490 | Msa1315580 | 0.803230 | 3.849500e-49 | -8.615850e-47 |
| Msa0278570 | Msa1315580 | 0.814692 | 1.353244e-51 | -8.615850e-47 |
| Msa0287870 | Msa1315580 | 0.808602 | 2.857795e-50 | -8.615850e-47 |
| Msa0288080 | Msa1315580 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0296790 | Msa1315580 | 0.807556 | 4.770881e-50 | -8.615850e-47 |
| Msa0315690 | Msa1315580 | 0.802231 | 6.187926e-49 | -8.615850e-47 |
| Msa0317970 | Msa1315580 | 0.832257 | 1.048232e-55 | -8.615850e-47 |
| Msa0321690 | Msa1315580 | 0.804430 | 2.168196e-49 | -8.615850e-47 |
| Msa1158390 | Msa1315580 | 0.825422 | 4.729153e-54 | -8.615850e-47 |
| Msa1163730 | Msa1315580 | 0.808676 | 2.755193e-50 | -8.615850e-47 |
| Msa1188180 | Msa1315580 | 0.803705 | 3.068930e-49 | -8.615850e-47 |
| Msa1196610 | Msa1315580 | -0.815694 | 8.109185e-52 | -8.615850e-47 |
| Msa1221330 | Msa1315580 | 0.838272 | 3.172752e-57 | -8.615850e-47 |
| Msa0491000 | Msa1315580 | 0.805240 | 1.468618e-49 | -8.615850e-47 |
| Msa0521010 | Msa1315580 | 0.848829 | 4.776949e-60 | -8.615850e-47 |
| Msa0527540 | Msa1315580 | 0.807313 | 5.372257e-50 | -8.615850e-47 |
| Msa0581400 | Msa1315580 | 0.813806 | 2.124528e-51 | -8.615850e-47 |
| Msa0592270 | Msa1315580 | 0.817771 | 2.774257e-52 | -8.615850e-47 |
| Msa0594050 | Msa1315580 | 0.811859 | 5.671565e-51 | -8.615850e-47 |
| Msa0844110 | Msa1315580 | 0.801428 | 9.047718e-49 | -8.615850e-47 |
| Msa0878220 | Msa1315580 | 0.831548 | 1.568005e-55 | -8.615850e-47 |
| Msa0894710 | Msa1315580 | 0.818685 | 1.722786e-52 | -8.615850e-47 |
| Msa0921420 | Msa1315580 | 0.820841 | 5.542734e-53 | -8.615850e-47 |
| Msa0943970 | Msa1315580 | 0.827550 | 1.470350e-54 | -8.615850e-47 |
| Msa0944020 | Msa1315580 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
| Msa0960390 | Msa1315580 | 0.842810 | 2.060262e-58 | -8.615850e-47 |
| Msa0974950 | Msa1315580 | 0.843916 | 1.044176e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315580 | MtrunA17_Chr8g0345331 | 95.528 | 246 | 5 | 2 | 1 | 245 | 1 | 241 | 4.98e-176 | 483 |
| Msa1315580 | MtrunA17_Chr4g0068301 | 32.967 | 182 | 116 | 2 | 6 | 187 | 11 | 186 | 2.99e-33 | 122 |
| Msa1315580 | MtrunA17_Chr8g0369311 | 34.211 | 114 | 66 | 3 | 8 | 117 | 60 | 168 | 9.39e-16 | 73.6 |
| Msa1315580 | MtrunA17_Chr1g0154011 | 34.211 | 114 | 66 | 3 | 8 | 117 | 4 | 112 | 5.10e-15 | 70.1 |
| Msa1315580 | MtrunA17_Chr3g0108261 | 32.456 | 114 | 68 | 3 | 8 | 117 | 4 | 112 | 7.39e-15 | 69.7 |
| Msa1315580 | MtrunA17_Chr5g0432831 | 32.456 | 114 | 68 | 3 | 8 | 117 | 4 | 112 | 8.02e-15 | 69.7 |
| Msa1315580 | MtrunA17_Chr7g0275361 | 32.456 | 114 | 68 | 3 | 8 | 117 | 4 | 112 | 1.27e-14 | 68.9 |
| Msa1315580 | MtrunA17_Chr4g0037011 | 31.579 | 114 | 69 | 3 | 8 | 117 | 4 | 112 | 1.70e-14 | 68.6 |
| Msa1315580 | MtrunA17_Chr8g0362321 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 5.12e-14 | 67.4 |
| Msa1315580 | MtrunA17_Chr4g0060351 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 9.36e-14 | 67.0 |
| Msa1315580 | MtrunA17_Chr8g0378601 | 29.661 | 118 | 66 | 3 | 8 | 117 | 25 | 133 | 1.44e-12 | 63.9 |
| Msa1315580 | MtrunA17_Chr3g0139901 | 30.579 | 121 | 70 | 5 | 4 | 116 | 2 | 116 | 2.36e-11 | 60.5 |
| Msa1315580 | MtrunA17_Chr5g0396451 | 33.621 | 116 | 68 | 3 | 4 | 115 | 31 | 141 | 3.20e-11 | 60.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1315580 | AT1G17280.9 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT1G17280.7 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT1G17280.6 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT1G17280.2 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT1G17280.5 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT1G17280.3 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT1G17280.1 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT1G17280.8 | 75.510 | 245 | 52 | 3 | 1 | 245 | 1 | 237 | 3.08e-136 | 383 |
| Msa1315580 | AT5G50430.1 | 73.092 | 249 | 57 | 3 | 1 | 245 | 1 | 243 | 2.45e-134 | 378 |
| Msa1315580 | AT5G50430.2 | 73.092 | 249 | 57 | 3 | 1 | 245 | 1 | 243 | 2.45e-134 | 378 |
| Msa1315580 | AT1G17280.4 | 73.705 | 251 | 52 | 4 | 1 | 245 | 1 | 243 | 1.38e-133 | 376 |
| Msa1315580 | AT5G50430.3 | 67.871 | 249 | 57 | 4 | 1 | 245 | 1 | 230 | 2.28e-119 | 340 |
| Msa1315580 | AT3G17000.1 | 40.426 | 141 | 76 | 2 | 6 | 144 | 12 | 146 | 5.30e-33 | 122 |
| Msa1315580 | AT5G56150.1 | 34.211 | 114 | 66 | 3 | 8 | 117 | 4 | 112 | 4.70e-16 | 73.2 |
| Msa1315580 | AT3G08690.2 | 34.211 | 114 | 66 | 3 | 8 | 117 | 4 | 112 | 3.68e-15 | 70.9 |
| Msa1315580 | AT3G08690.1 | 34.211 | 114 | 66 | 3 | 8 | 117 | 4 | 112 | 3.68e-15 | 70.9 |
| Msa1315580 | AT5G56150.2 | 34.513 | 113 | 64 | 4 | 8 | 116 | 4 | 110 | 4.47e-15 | 69.7 |
| Msa1315580 | AT4G27960.1 | 33.333 | 114 | 67 | 3 | 8 | 117 | 4 | 112 | 5.85e-15 | 70.5 |
| Msa1315580 | AT1G64230.2 | 33.333 | 114 | 67 | 3 | 8 | 117 | 4 | 112 | 6.55e-15 | 70.1 |
| Msa1315580 | AT1G64230.1 | 33.333 | 114 | 67 | 3 | 8 | 117 | 4 | 112 | 6.55e-15 | 70.1 |
| Msa1315580 | AT5G41700.5 | 33.333 | 114 | 67 | 3 | 8 | 117 | 4 | 112 | 1.05e-14 | 69.7 |
| Msa1315580 | AT5G41700.2 | 33.333 | 114 | 67 | 3 | 8 | 117 | 4 | 112 | 1.05e-14 | 69.7 |
| Msa1315580 | AT5G41700.1 | 33.333 | 114 | 67 | 3 | 8 | 117 | 4 | 112 | 1.05e-14 | 69.7 |
| Msa1315580 | AT4G27960.2 | 33.333 | 114 | 67 | 3 | 8 | 117 | 34 | 142 | 1.30e-14 | 70.1 |
| Msa1315580 | AT5G41700.4 | 34.783 | 115 | 65 | 4 | 8 | 117 | 4 | 113 | 1.93e-14 | 68.9 |
| Msa1315580 | AT5G53300.2 | 32.456 | 114 | 68 | 3 | 8 | 117 | 4 | 112 | 2.21e-14 | 68.9 |
| Msa1315580 | AT5G53300.4 | 32.456 | 114 | 68 | 3 | 8 | 117 | 4 | 112 | 2.21e-14 | 68.9 |
| Msa1315580 | AT5G53300.1 | 32.456 | 114 | 68 | 3 | 8 | 117 | 4 | 112 | 2.21e-14 | 68.9 |
| Msa1315580 | AT2G02760.1 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 6.24e-14 | 67.8 |
| Msa1315580 | AT2G02760.2 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 6.24e-14 | 67.8 |
| Msa1315580 | AT2G02760.4 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 6.24e-14 | 67.8 |
| Msa1315580 | AT2G02760.3 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 6.24e-14 | 67.8 |
| Msa1315580 | AT1G14400.1 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 6.78e-14 | 67.8 |
| Msa1315580 | AT1G14400.2 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 6.78e-14 | 67.8 |
| Msa1315580 | AT2G16740.1 | 30.702 | 114 | 70 | 3 | 8 | 117 | 4 | 112 | 2.55e-13 | 65.9 |
| Msa1315580 | AT5G41700.3 | 33.654 | 104 | 60 | 3 | 8 | 107 | 4 | 102 | 3.79e-13 | 65.5 |
| Msa1315580 | AT1G64230.5 | 29.915 | 117 | 69 | 4 | 5 | 117 | 47 | 154 | 1.12e-12 | 65.1 |
| Msa1315580 | AT1G64230.4 | 29.915 | 117 | 69 | 4 | 5 | 117 | 47 | 154 | 1.12e-12 | 65.1 |
| Msa1315580 | AT5G62540.1 | 31.250 | 112 | 68 | 3 | 8 | 115 | 7 | 113 | 1.70e-12 | 63.9 |
| Msa1315580 | AT5G53300.3 | 32.692 | 104 | 61 | 3 | 8 | 107 | 4 | 102 | 2.23e-12 | 62.4 |
| Msa1315580 | AT1G36340.2 | 30.841 | 107 | 68 | 3 | 3 | 107 | 6 | 108 | 2.98e-12 | 63.2 |
| Msa1315580 | AT1G36340.1 | 30.841 | 107 | 68 | 3 | 3 | 107 | 6 | 108 | 2.98e-12 | 63.2 |
| Msa1315580 | AT1G64230.3 | 31.148 | 122 | 66 | 4 | 8 | 116 | 4 | 120 | 4.28e-12 | 62.8 |
| Msa1315580 | AT3G08700.2 | 31.579 | 114 | 68 | 4 | 8 | 116 | 4 | 112 | 4.80e-12 | 62.4 |
| Msa1315580 | AT3G08700.1 | 31.579 | 114 | 68 | 4 | 8 | 116 | 4 | 112 | 4.80e-12 | 62.4 |
Find 90 sgRNAs with CRISPR-Local
Find 366 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACATTGGATTCCAACTTTC+AGG | 0.160053 | 8_4:-15064953 | None:intergenic |
| TTATTACTCTTCTCCATCTT+TGG | 0.164344 | 8_4:+15066234 | Msa1315580:CDS |
| TCTCTTAAACGCCGCCGTTT+TGG | 0.209526 | 8_4:+15061842 | Msa1315580:five_prime_UTR |
| AGTTCCATGATAATCCTTTA+TGG | 0.211175 | 8_4:-15066312 | None:intergenic |
| CTCCATCTTTGGGGTTGTTA+TGG | 0.233457 | 8_4:+15066245 | Msa1315580:CDS |
| GTGAAGGACGGGCCACAATA+TGG | 0.237187 | 8_4:-15064121 | None:intergenic |
| TATTACTCTTCTCCATCTTT+GGG | 0.241159 | 8_4:+15066235 | Msa1315580:CDS |
| AAAAGCGGTAAATTACATTA+TGG | 0.269229 | 8_4:-15067912 | None:intergenic |
| CTGATTCCAGGAGGTTTATA+AGG | 0.284681 | 8_4:-15064680 | None:intergenic |
| TAAAAGTCCGAGGTCTGTTT+TGG | 0.291867 | 8_4:+15066113 | Msa1315580:CDS |
| TTCCTTGCAGTGCAACATTC+AGG | 0.294415 | 8_4:+15065995 | Msa1315580:intron |
| AGGATTTGTATACGAAATAT+TGG | 0.299184 | 8_4:+15066373 | Msa1315580:three_prime_UTR |
| GATCCGATTTCCCCAAATAT+TGG | 0.331926 | 8_4:-15061937 | None:intergenic |
| AATGGACAAATTATATATTA+AGG | 0.334677 | 8_4:+15066585 | Msa1315580:three_prime_UTR |
| TATGAATGCAGCATACTTAC+CGG | 0.344644 | 8_4:+15065155 | Msa1315580:intron |
| CCACCAATATTTGGGGAAAT+CGG | 0.346930 | 8_4:+15061934 | Msa1315580:five_prime_UTR |
| TACCGGGCTTCTTTCATTCA+TGG | 0.353871 | 8_4:+15065172 | Msa1315580:CDS |
| TGTAGCATGACAACACCTAA+TGG | 0.360595 | 8_4:+15064784 | Msa1315580:intron |
| TGGTTCTTCATGTTCTGCTT+AGG | 0.369159 | 8_4:+15066334 | Msa1315580:three_prime_UTR |
| CTTATAAACCTCCTGGAATC+AGG | 0.389083 | 8_4:+15064681 | Msa1315580:CDS |
| AAGTATCAATACCAAGAAAC+TGG | 0.417883 | 8_4:-15066449 | None:intergenic |
| CCACAGGAGAAGACTTGAAA+AGG | 0.427561 | 8_4:+15066151 | Msa1315580:CDS |
| ACAAGAAGGCACCTGATTCC+AGG | 0.429061 | 8_4:-15064692 | None:intergenic |
| CGGGCCACAATATGGGAAAC+TGG | 0.431636 | 8_4:-15064113 | None:intergenic |
| GTTGTACTTCTCCACGTACT+CGG | 0.441817 | 8_4:-15066028 | None:intergenic |
| TGTGTCATGAACCGCCCATT+AGG | 0.446261 | 8_4:-15064799 | None:intergenic |
| GAAGACTTGAAAAGGGTTGA+GGG | 0.448975 | 8_4:+15066159 | Msa1315580:CDS |
| AGCGAGGGAACACCTTTCTC+AGG | 0.450214 | 8_4:+15064485 | Msa1315580:CDS |
| ATAAAGGATTATCATGGAAC+TGG | 0.451340 | 8_4:+15066314 | Msa1315580:three_prime_UTR |
| TTGTACTTCTCCACGTACTC+GGG | 0.458106 | 8_4:-15066027 | None:intergenic |
| ATTTGGGGAAATCGGATCTC+AGG | 0.461390 | 8_4:+15061942 | Msa1315580:five_prime_UTR |
| ATGGGTACAAGGGTCCATAA+AGG | 0.462872 | 8_4:+15066298 | Msa1315580:three_prime_UTR |
| TTGCAGTTCATCCTGAAAGT+TGG | 0.464526 | 8_4:+15064942 | Msa1315580:intron |
| GAAAAGGGTTGAGGGATTGA+AGG | 0.471212 | 8_4:+15066167 | Msa1315580:CDS |
| AAACATACTGCAAATGATGC+TGG | 0.474451 | 8_4:+15066536 | Msa1315580:three_prime_UTR |
| GAATATCCTTATAAACCTCC+TGG | 0.476050 | 8_4:+15064674 | Msa1315580:CDS |
| AGTAATAACATCATCCAAGT+TGG | 0.481105 | 8_4:-15066219 | None:intergenic |
| GTAGCATGACAACACCTAAT+GGG | 0.487721 | 8_4:+15064785 | Msa1315580:intron |
| TGCCATAACAACCCCAAAGA+TGG | 0.488741 | 8_4:-15066247 | None:intergenic |
| TGAAGGACGGGCCACAATAT+GGG | 0.495022 | 8_4:-15064120 | None:intergenic |
| AGAAGACTTGAAAAGGGTTG+AGG | 0.497193 | 8_4:+15066158 | Msa1315580:CDS |
| TCATATCTCAGATTACGTAT+TGG | 0.507101 | 8_4:+15064457 | Msa1315580:intron |
| GGAGCCAGTTTCCCATATTG+TGG | 0.524830 | 8_4:+15064109 | Msa1315580:intron |
| TACACTGCCAGTGGTTGGAC+TGG | 0.524839 | 8_4:-15065845 | None:intergenic |
| GGGTCCATAAAGGATTATCA+TGG | 0.535419 | 8_4:+15066308 | Msa1315580:three_prime_UTR |
| CGCCACTCAAGAATATCACT+TGG | 0.539408 | 8_4:-15064143 | None:intergenic |
| CTTATTCTCTTACAATGTGG+AGG | 0.541075 | 8_4:+15066488 | Msa1315580:three_prime_UTR |
| AACATACTGCAAATGATGCT+GGG | 0.547656 | 8_4:+15066537 | Msa1315580:three_prime_UTR |
| CCGATTTCCCCAAATATTGG+TGG | 0.548448 | 8_4:-15061934 | None:intergenic |
| ATGCATCAAGCGCCTTCAGA+AGG | 0.549944 | 8_4:+15063649 | Msa1315580:CDS |
| AATATCACTTGGTGAAGGAC+GGG | 0.551464 | 8_4:-15064132 | None:intergenic |
| ATCCAATGTGGTCTGTATCA+AGG | 0.552283 | 8_4:+15064966 | Msa1315580:CDS |
| ATTACTCTTCTCCATCTTTG+GGG | 0.552481 | 8_4:+15066236 | Msa1315580:CDS |
| GAATATCACTTGGTGAAGGA+CGG | 0.560660 | 8_4:-15064133 | None:intergenic |
| TAATTTGCTAAACCTGAGAA+AGG | 0.560758 | 8_4:-15064497 | None:intergenic |
| TACCATGAATGAAAGAAGCC+CGG | 0.570761 | 8_4:-15065174 | None:intergenic |
| CACAGGAGAAGACTTGAAAA+GGG | 0.572298 | 8_4:+15066152 | Msa1315580:CDS |
| GAAAACAATGTAGAGTCCAC+AGG | 0.573857 | 8_4:+15066135 | Msa1315580:CDS |
| CAGCCAACGTCATCAGAGAC+TGG | 0.574761 | 8_4:+15066084 | Msa1315580:CDS |
| AGCGAAAACAAATTCCAAAA+CGG | 0.576110 | 8_4:-15061856 | None:intergenic |
| TTGAGGGATTGAAGGATGCG+AGG | 0.577968 | 8_4:+15066175 | Msa1315580:CDS |
| GTGCTCTATACTCCTTCTGA+AGG | 0.582054 | 8_4:-15063661 | None:intergenic |
| ATGAATGCAGCATACTTACC+GGG | 0.582437 | 8_4:+15065156 | Msa1315580:intron |
| ATCTCAGATTACGTATTGGA+AGG | 0.583968 | 8_4:+15064461 | Msa1315580:intron |
| AAAATTCACAGCTGGAGTAG+AGG | 0.587096 | 8_4:-15066273 | None:intergenic |
| GTGTTTACACTGCCAGTGGT+TGG | 0.587196 | 8_4:-15065850 | None:intergenic |
| ACCTTAAACTACATTAAAAG+CGG | 0.587833 | 8_4:-15067927 | None:intergenic |
| GAAGATGTTCCCCGAGTACG+TGG | 0.599484 | 8_4:+15066017 | Msa1315580:CDS |
| TGTACTTCTCCACGTACTCG+GGG | 0.603988 | 8_4:-15066026 | None:intergenic |
| ATGGATACCAGTCCAACCAC+TGG | 0.607472 | 8_4:+15065838 | Msa1315580:CDS |
| GACCTTGATACAGACCACAT+TGG | 0.612471 | 8_4:-15064968 | None:intergenic |
| TACGTATTGGAAGGAAGCGA+GGG | 0.615267 | 8_4:+15064470 | Msa1315580:CDS |
| TGTATACGAAATATTGGACA+TGG | 0.623620 | 8_4:+15066379 | Msa1315580:three_prime_UTR |
| ACTCTTATTCTCTTACAATG+TGG | 0.623980 | 8_4:+15066485 | Msa1315580:three_prime_UTR |
| TTACGTATTGGAAGGAAGCG+AGG | 0.625291 | 8_4:+15064469 | Msa1315580:CDS |
| GATTCAGAACAGAATCGAGA+AGG | 0.631381 | 8_4:-15063606 | None:intergenic |
| TCTGTTCTGAATCAGTCGAA+TGG | 0.634992 | 8_4:+15063616 | Msa1315580:exon |
| AGTAGTGTTTACACTGCCAG+TGG | 0.639725 | 8_4:-15065854 | None:intergenic |
| CACCAAGTGATATTCTTGAG+TGG | 0.643937 | 8_4:+15064141 | Msa1315580:CDS |
| AGTGTGGTTGGTCGTGAGTG+TGG | 0.644699 | 8_4:+15067840 | Msa1315580:three_prime_UTR |
| GTTCTGAATCAGTCGAATGG+CGG | 0.661506 | 8_4:+15063619 | Msa1315580:exon |
| TCAAGAATATCACTTGGTGA+AGG | 0.663216 | 8_4:-15064137 | None:intergenic |
| GGTTTATAAGGATATTCCTG+AGG | 0.670816 | 8_4:-15064668 | None:intergenic |
| CTGAAAGTTGGAATCCAATG+TGG | 0.673790 | 8_4:+15064954 | Msa1315580:CDS |
| TGACCAGTCTCTGATGACGT+TGG | 0.673844 | 8_4:-15066087 | None:intergenic |
| GAAAACAAATTCCAAAACGG+CGG | 0.699921 | 8_4:-15061853 | None:intergenic |
| GCATGACAACACCTAATGGG+CGG | 0.704176 | 8_4:+15064788 | Msa1315580:intron |
| CTGGTCAAGATAAAAGTCCG+AGG | 0.710589 | 8_4:+15066103 | Msa1315580:CDS |
| AAGGGGCAAAATAATTAACG+CGG | 0.712004 | 8_4:+15061894 | Msa1315580:five_prime_UTR |
| AGAAGGCACCTGATTCCAGG+AGG | 0.717165 | 8_4:-15064689 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTAGTTTTTTTTTTATTTG+TGG | + | chr8_4:15062088-15062107 | Msa1315580:intron | 10.0% |
| !!! | TTAGTTTTTTTTTTATTTGT+GGG | + | chr8_4:15062089-15062108 | Msa1315580:intron | 10.0% |
| !! | AATAAATTGAAAATAGAATT+AGG | - | chr8_4:15063511-15063530 | None:intergenic | 10.0% |
| !!! | TCACTATTTATTTTTATTTA+TGG | + | chr8_4:15063732-15063751 | Msa1315580:intron | 10.0% |
| !! | GAAAAAATTAAAACATAAAA+GGG | - | chr8_4:15065033-15065052 | None:intergenic | 10.0% |
| !! | AGAAAAAATTAAAACATAAA+AGG | - | chr8_4:15065034-15065053 | None:intergenic | 10.0% |
| !!! | TAATTTTTTCTTTTGAAATT+TGG | + | chr8_4:15065043-15065062 | Msa1315580:intron | 10.0% |
| !!! | CATTGAATTTATTATTTTTT+TGG | + | chr8_4:15066864-15066883 | Msa1315580:intron | 10.0% |
| !!! | TTATAAGAATATCATATTTT+TGG | + | chr8_4:15067004-15067023 | Msa1315580:intron | 10.0% |
| !! | AGATAAGAATTTATATTATA+TGG | + | chr8_4:15067039-15067058 | Msa1315580:intron | 10.0% |
| !!! | ATTTTATTATCTATTTTTGA+AGG | - | chr8_4:15067487-15067506 | None:intergenic | 10.0% |
| !! | ATATTAGAAAATAAAAGAAA+AGG | + | chr8_4:15067581-15067600 | Msa1315580:intron | 10.0% |
| !!! | TAGTTTTTTTTTTATTTGTG+GGG | + | chr8_4:15062090-15062109 | Msa1315580:intron | 15.0% |
| !!! | TCATTTTTATTATTTGATTG+TGG | + | chr8_4:15062126-15062145 | Msa1315580:intron | 15.0% |
| !!! | AAATTTTGGTTTTTGATTAA+TGG | + | chr8_4:15062149-15062168 | Msa1315580:intron | 15.0% |
| !!! | AATAATTTGACTTTATACAT+AGG | + | chr8_4:15062443-15062462 | Msa1315580:intron | 15.0% |
| !! | ATGGATATTACTATTATTAT+AGG | + | chr8_4:15062729-15062748 | Msa1315580:intron | 15.0% |
| !!! | TATTATTATAGGTTTTATGT+AGG | + | chr8_4:15062740-15062759 | Msa1315580:intron | 15.0% |
| !! | AAGAAAATTTATGAATTATG+TGG | - | chr8_4:15063089-15063108 | None:intergenic | 15.0% |
| !! | AATGGACAAATTATATATTA+AGG | + | chr8_4:15066585-15066604 | Msa1315580:three_prime_UTR | 15.0% |
| !!! | TTTTTAAGTTAAAAGTTGTT+TGG | + | chr8_4:15066755-15066774 | Msa1315580:intron | 15.0% |
| !!! | TTTTTAAGTTAAAAGTTGTT+TGG | + | chr8_4:15066755-15066774 | Msa1315580:intron | 15.0% |
| !!! | TGAATTTATTATTTTTTTGG+TGG | + | chr8_4:15066867-15066886 | Msa1315580:intron | 15.0% |
| !!! | AATTTGTTATACAGTATAAT+TGG | - | chr8_4:15066981-15067000 | None:intergenic | 15.0% |
| !!! | TATTATATTTGTTACATTGT+TGG | + | chr8_4:15067062-15067081 | Msa1315580:intron | 15.0% |
| !! | TTTAAAAAAAATATATGGAC+CGG | + | chr8_4:15067521-15067540 | Msa1315580:intron | 15.0% |
| !!! | TTATTTGATTGTGGAAATTT+TGG | + | chr8_4:15062135-15062154 | Msa1315580:intron | 20.0% |
| !! | ATGATCCAAACAAAAAATTA+GGG | - | chr8_4:15062253-15062272 | None:intergenic | 20.0% |
| !! | ATATGTGAAATTTAAGAAAG+AGG | + | chr8_4:15062310-15062329 | Msa1315580:intron | 20.0% |
| !! | ATAACTAAAATATAGTACAG+AGG | - | chr8_4:15062381-15062400 | None:intergenic | 20.0% |
| !! | ATTATAAAACTTACTAACCT+AGG | - | chr8_4:15062551-15062570 | None:intergenic | 20.0% |
| !!! | AATATTTTAAGGTAGTCATT+TGG | + | chr8_4:15062784-15062803 | Msa1315580:intron | 20.0% |
| !!! | ACTGTCATAGTTTTAATATT+GGG | - | chr8_4:15063379-15063398 | None:intergenic | 20.0% |
| !!! | AACTGTCATAGTTTTAATAT+TGG | - | chr8_4:15063380-15063399 | None:intergenic | 20.0% |
| !! | TTCAAATATTATGATGATCT+AGG | - | chr8_4:15064044-15064063 | None:intergenic | 20.0% |
| !!! | AATTTTATTACTGTATTTGC+AGG | + | chr8_4:15064088-15064107 | Msa1315580:intron | 20.0% |
| !!! | ACATTTTTTGTTTCCTTTTT+AGG | + | chr8_4:15064617-15064636 | Msa1315580:intron | 20.0% |
| !!! | CATTATAAAAAGTATGAACT+TGG | - | chr8_4:15064766-15064785 | None:intergenic | 20.0% |
| !! | AAATTAAACTGTAGCAATAT+GGG | - | chr8_4:15064902-15064921 | None:intergenic | 20.0% |
| !! | AAAATTAAACTGTAGCAATA+TGG | - | chr8_4:15064903-15064922 | None:intergenic | 20.0% |
| !!! | TTAAAATTGTTGTTCCAAAA+AGG | + | chr8_4:15065526-15065545 | Msa1315580:intron | 20.0% |
| !!! | TAAAATTGTTGTTCCAAAAA+GGG | + | chr8_4:15065527-15065546 | Msa1315580:intron | 20.0% |
| !!! | TTTTTATGAAAAACCCTTTT+TGG | - | chr8_4:15065543-15065562 | None:intergenic | 20.0% |
| !!! | AAGGGTTTTTCATAAAAAAA+TGG | + | chr8_4:15065545-15065564 | Msa1315580:intron | 20.0% |
| !! | AGTTAAAATAAAGCTCTTTA+AGG | + | chr8_4:15066656-15066675 | Msa1315580:intron | 20.0% |
| !! | AACAAAAAAAAACAGACATA+CGG | + | chr8_4:15067287-15067306 | Msa1315580:intron | 20.0% |
| !! | AGAAAGGGAATAAAAATATT+TGG | + | chr8_4:15067363-15067382 | Msa1315580:intron | 20.0% |
| !! | CATGAATAAAAATATTTGTG+AGG | + | chr8_4:15067402-15067421 | Msa1315580:intron | 20.0% |
| !!! | CCATATATTTTTTTTAAAGG+AGG | - | chr8_4:15067519-15067538 | None:intergenic | 20.0% |
| !!! | CCTCCTTTAAAAAAAATATA+TGG | + | chr8_4:15067516-15067535 | Msa1315580:intron | 20.0% |
| !!! | GGTCCATATATTTTTTTTAA+AGG | - | chr8_4:15067522-15067541 | None:intergenic | 20.0% |
| !! | TTAGAATGCATAAAATTGAA+TGG | - | chr8_4:15067702-15067721 | None:intergenic | 20.0% |
| !!! | AAAAAAGTACTTTTTTTCGA+AGG | + | chr8_4:15067721-15067740 | Msa1315580:intron | 20.0% |
| !!! | ACACTATTTTAAAAACTCTT+AGG | - | chr8_4:15067825-15067844 | None:intergenic | 20.0% |
| !!! | TAAGAGTTTTTAAAATAGTG+TGG | + | chr8_4:15067824-15067843 | Msa1315580:intron | 20.0% |
| !!! | TTAATTATTTTGCCCCTTTT+TGG | - | chr8_4:15061892-15061911 | None:intergenic | 25.0% |
| !!! | ATTTTTTGCCACCAATATTT+GGG | + | chr8_4:15061926-15061945 | Msa1315580:five_prime_UTR | 25.0% |
| ! | AAACCTTGAATTATCGAATT+GGG | - | chr8_4:15061999-15062018 | None:intergenic | 25.0% |
| ! | ACAAATCAGAGAAAAAGAAA+GGG | - | chr8_4:15062022-15062041 | None:intergenic | 25.0% |
| ! | TACAAATCAGAGAAAAAGAA+AGG | - | chr8_4:15062023-15062042 | None:intergenic | 25.0% |
| !!! | TAATGGATCATTGTTGATTT+TGG | + | chr8_4:15062166-15062185 | Msa1315580:intron | 25.0% |
| ! | CATGATCCAAACAAAAAATT+AGG | - | chr8_4:15062254-15062273 | None:intergenic | 25.0% |
| !!! | CATAAGTAGTTTTATGCTTT+AGG | + | chr8_4:15062594-15062613 | Msa1315580:intron | 25.0% |
| !! | GTGGTTACTCAAATATTTTA+AGG | + | chr8_4:15062773-15062792 | Msa1315580:intron | 25.0% |
| ! | AATTATGTGGTATGAAATCA+GGG | - | chr8_4:15063076-15063095 | None:intergenic | 25.0% |
| ! | GAATTAGGATCAACATTATT+CGG | - | chr8_4:15063129-15063148 | None:intergenic | 25.0% |
| !!! | TACTCCATTTTTCTTCATTA+TGG | + | chr8_4:15063259-15063278 | Msa1315580:intron | 25.0% |
| ! | AGTACCATAATGAAGAAAAA+TGG | - | chr8_4:15063266-15063285 | None:intergenic | 25.0% |
| !! | ATTTTTCTTCATTATGGTAC+TGG | + | chr8_4:15063265-15063284 | Msa1315580:intron | 25.0% |
| ! | ATAAGAGCTATAGTAGAATA+AGG | - | chr8_4:15063338-15063357 | None:intergenic | 25.0% |
| ! | TAAGAGTAAACTAAAAAAGG+CGG | - | chr8_4:15063448-15063467 | None:intergenic | 25.0% |
| ! | TGCTACAAACCAAAAATAAT+GGG | - | chr8_4:15063472-15063491 | None:intergenic | 25.0% |
| ! | ATGCTACAAACCAAAAATAA+TGG | - | chr8_4:15063473-15063492 | None:intergenic | 25.0% |
| ! | ATAAATACACAAGAATAGAG+AGG | - | chr8_4:15063821-15063840 | None:intergenic | 25.0% |
| ! | TTCTTGTGTATTTATGTATC+TGG | + | chr8_4:15063826-15063845 | Msa1315580:intron | 25.0% |
| ! | TCTTGTGTATTTATGTATCT+GGG | + | chr8_4:15063827-15063846 | Msa1315580:intron | 25.0% |
| ! | TCATGCTATAAACATTTCAT+CGG | - | chr8_4:15063878-15063897 | None:intergenic | 25.0% |
| ! | ATGTTTATAGCATGAATTAC+TGG | + | chr8_4:15063883-15063902 | Msa1315580:intron | 25.0% |
| ! | TGTTTATAGCATGAATTACT+GGG | + | chr8_4:15063884-15063903 | Msa1315580:intron | 25.0% |
| ! | AAACTATACACACTATTAAG+AGG | - | chr8_4:15063944-15063963 | None:intergenic | 25.0% |
| ! | CTGAATAATTGTTTCATGAT+TGG | + | chr8_4:15063964-15063983 | Msa1315580:intron | 25.0% |
| !! | TAATTGTTTCATGATTGGTT+AGG | + | chr8_4:15063969-15063988 | Msa1315580:intron | 25.0% |
| !! | AAGCTCTAATATCCAAAAAT+GGG | + | chr8_4:15064208-15064227 | Msa1315580:intron | 25.0% |
| !! | ATATTCTGTTTTCCCATTTT+TGG | - | chr8_4:15064223-15064242 | None:intergenic | 25.0% |
| ! | AACAGAATATGTTGAATCTT+TGG | + | chr8_4:15064233-15064252 | Msa1315580:intron | 25.0% |
| ! | CTGACAATATAGTAGTATTA+AGG | - | chr8_4:15064344-15064363 | None:intergenic | 25.0% |
| !! | GTAATTTATTTGTTAGCTAG+TGG | + | chr8_4:15064404-15064423 | Msa1315580:intron | 25.0% |
| ! | AGTTGAGATAGTAATAAACT+GGG | - | chr8_4:15064585-15064604 | None:intergenic | 25.0% |
| ! | AAGTTGAGATAGTAATAAAC+TGG | - | chr8_4:15064586-15064605 | None:intergenic | 25.0% |
| !!! | TTTTTTGTTTCCTTTTTAGG+TGG | + | chr8_4:15064620-15064639 | Msa1315580:intron | 25.0% |
| ! | ATAGTAATATCCACCTAAAA+AGG | - | chr8_4:15064633-15064652 | None:intergenic | 25.0% |
| !!! | TTTTTAGGTGGATATTACTA+TGG | + | chr8_4:15064632-15064651 | Msa1315580:intron | 25.0% |
| !!! | CTACAGTTTAATTTTTCTGT+GGG | + | chr8_4:15064908-15064927 | Msa1315580:intron | 25.0% |
| !!! | TACAGTTTAATTTTTCTGTG+GGG | + | chr8_4:15064909-15064928 | Msa1315580:intron | 25.0% |
| !!! | AGTTTTGAAGTTCTTTTATG+TGG | + | chr8_4:15065001-15065020 | Msa1315580:intron | 25.0% |
| ! | CATGGTATGTTATTATGTTA+TGG | + | chr8_4:15065190-15065209 | Msa1315580:intron | 25.0% |
| ! | TTCATATTCTAATTGAACTC+TGG | + | chr8_4:15065217-15065236 | Msa1315580:intron | 25.0% |
| ! | TTTGTTTGCTCATAAGATAT+TGG | + | chr8_4:15065261-15065280 | Msa1315580:intron | 25.0% |
| ! | TTGTTTGCTCATAAGATATT+GGG | + | chr8_4:15065262-15065281 | Msa1315580:intron | 25.0% |
| ! | TATACTTGTACGCATAATAA+TGG | + | chr8_4:15065674-15065693 | Msa1315580:intron | 25.0% |
| !! | ATACAACTTTCAAACTTGTT+AGG | + | chr8_4:15065711-15065730 | Msa1315580:intron | 25.0% |
| !!! | TGAATTTTTTATGGGTACAA+GGG | + | chr8_4:15066288-15066307 | Msa1315580:exon | 25.0% |
| ! | AGGATTTGTATACGAAATAT+TGG | + | chr8_4:15066373-15066392 | Msa1315580:three_prime_UTR | 25.0% |
| !!! | CTGCATTTTATATTCTAGAA+TGG | + | chr8_4:15066567-15066586 | Msa1315580:three_prime_UTR | 25.0% |
| !!! | TTATATATTAAGGTACCGTT+TGG | + | chr8_4:15066595-15066614 | Msa1315580:intron | 25.0% |
| ! | TATAAATATATGCAAAGTCG+CGG | - | chr8_4:15066907-15066926 | None:intergenic | 25.0% |
| !!! | TGTCTTCCATTTTTTTTAAC+CGG | - | chr8_4:15067543-15067562 | None:intergenic | 25.0% |
| ! | TACTTTATCGATATTGTGTT+TGG | + | chr8_4:15067744-15067763 | Msa1315580:intron | 25.0% |
| !!! | AGTTTTTAAAATAGTGTGGT+TGG | + | chr8_4:15067828-15067847 | Msa1315580:three_prime_UTR | 25.0% |
| ! | AAAAGCGGTAAATTACATTA+TGG | - | chr8_4:15067915-15067934 | None:intergenic | 25.0% |
| AGCGAAAACAAATTCCAAAA+CGG | - | chr8_4:15061859-15061878 | None:intergenic | 30.0% | |
| !!! | GATTTTTTGCCACCAATATT+TGG | + | chr8_4:15061925-15061944 | Msa1315580:five_prime_UTR | 30.0% |
| !!! | TTTTTTGCCACCAATATTTG+GGG | + | chr8_4:15061927-15061946 | Msa1315580:five_prime_UTR | 30.0% |
| GAAACCTTGAATTATCGAAT+TGG | - | chr8_4:15062000-15062019 | None:intergenic | 30.0% | |
| !! | GGTAAGGTAAATTGATTTTG+GGG | - | chr8_4:15062232-15062251 | None:intergenic | 30.0% |
| !! | GGGTAAGGTAAATTGATTTT+GGG | - | chr8_4:15062233-15062252 | None:intergenic | 30.0% |
| !! | AGGGTAAGGTAAATTGATTT+TGG | - | chr8_4:15062234-15062253 | None:intergenic | 30.0% |
| CCAAACAAAAAATTAGGGTA+AGG | - | chr8_4:15062248-15062267 | None:intergenic | 30.0% | |
| !!! | CCTTACCCTAATTTTTTGTT+TGG | + | chr8_4:15062245-15062264 | Msa1315580:intron | 30.0% |
| ATGTGAATTGCTTGAGTAAT+AGG | + | chr8_4:15062280-15062299 | Msa1315580:intron | 30.0% | |
| AGAAAGAGGATAACTTTGAA+AGG | + | chr8_4:15062324-15062343 | Msa1315580:intron | 30.0% | |
| ! | GAAAGAGGATAACTTTGAAA+GGG | + | chr8_4:15062325-15062344 | Msa1315580:intron | 30.0% |
| ! | ACTTTGAAAGGGATAATTCA+AGG | + | chr8_4:15062336-15062355 | Msa1315580:intron | 30.0% |
| ! | CTTTGAAAGGGATAATTCAA+GGG | + | chr8_4:15062337-15062356 | Msa1315580:intron | 30.0% |
| ATTTGAGAGATGAGTGAATT+TGG | + | chr8_4:15062470-15062489 | Msa1315580:intron | 30.0% | |
| GTATCTCAGAACATATTCAT+GGG | + | chr8_4:15062616-15062635 | Msa1315580:intron | 30.0% | |
| AGAACATATTCATGGGAAAT+TGG | + | chr8_4:15062623-15062642 | Msa1315580:intron | 30.0% | |
| TAACTCTCTATGAACATGAT+AGG | + | chr8_4:15062702-15062721 | Msa1315580:intron | 30.0% | |
| TATGAACATGATAGGTTTGA+TGG | + | chr8_4:15062710-15062729 | Msa1315580:intron | 30.0% | |
| TACAAATCCTATGAAAGACA+TGG | - | chr8_4:15062811-15062830 | None:intergenic | 30.0% | |
| AGAGTTTGTGAAATTTGAAG+AGG | - | chr8_4:15062892-15062911 | None:intergenic | 30.0% | |
| TGATTTACATACAGTTGTGT+TGG | + | chr8_4:15062928-15062947 | Msa1315580:intron | 30.0% | |
| ATTATGTGGTATGAAATCAG+GGG | - | chr8_4:15063075-15063094 | None:intergenic | 30.0% | |
| GAATTATGTGGTATGAAATC+AGG | - | chr8_4:15063077-15063096 | None:intergenic | 30.0% | |
| ATCAACATTATTCGGTATAG+AGG | - | chr8_4:15063121-15063140 | None:intergenic | 30.0% | |
| ! | TGTGTTGTGATATTTTACAG+AGG | + | chr8_4:15063296-15063315 | Msa1315580:intron | 30.0% |
| CTCTTATTAATTCAATGCTG+TGG | + | chr8_4:15063351-15063370 | Msa1315580:intron | 30.0% | |
| GGGTAAGAGTAAACTAAAAA+AGG | - | chr8_4:15063451-15063470 | None:intergenic | 30.0% | |
| ! | TACTCTTACCCCATTATTTT+TGG | + | chr8_4:15063460-15063479 | Msa1315580:intron | 30.0% |
| GCTACAAACCAAAAATAATG+GGG | - | chr8_4:15063471-15063490 | None:intergenic | 30.0% | |
| AGGAGAAAGGAAACATATAT+AGG | - | chr8_4:15063924-15063943 | None:intergenic | 30.0% | |
| ! | CAAGCTCTAATATCCAAAAA+TGG | + | chr8_4:15064207-15064226 | Msa1315580:intron | 30.0% |
| TACTATATTGTCAGCAAGAA+AGG | + | chr8_4:15064350-15064369 | Msa1315580:intron | 30.0% | |
| TCATATCTCAGATTACGTAT+TGG | + | chr8_4:15064457-15064476 | Msa1315580:intron | 30.0% | |
| !! | TAATTTGCTAAACCTGAGAA+AGG | - | chr8_4:15064500-15064519 | None:intergenic | 30.0% |
| ! | TTGTAAGTTCTTTTACCCAT+TGG | + | chr8_4:15064849-15064868 | Msa1315580:intron | 30.0% |
| TGGGTAACTATGATACAAAT+CGG | - | chr8_4:15064883-15064902 | None:intergenic | 30.0% | |
| !! | GCTACAGTTTAATTTTTCTG+TGG | + | chr8_4:15064907-15064926 | Msa1315580:intron | 30.0% |
| AGTATGCTGCATTCATAAAT+TGG | - | chr8_4:15065152-15065171 | None:intergenic | 30.0% | |
| ! | TTTTGCGTTTGTTTACCATA+CGG | + | chr8_4:15065356-15065375 | Msa1315580:intron | 30.0% |
| ! | AAAAAGAGTGATTTTCCGTA+TGG | - | chr8_4:15065374-15065393 | None:intergenic | 30.0% |
| !! | CTCTTTGAAATCATTGTTGA+TGG | - | chr8_4:15065408-15065427 | None:intergenic | 30.0% |
| GATTTGTGTTCCACAATTAA+TGG | + | chr8_4:15065968-15065987 | Msa1315580:intron | 30.0% | |
| AAAAACAAGGATTTCCAACT+TGG | + | chr8_4:15066205-15066224 | Msa1315580:CDS | 30.0% | |
| AGTAATAACATCATCCAAGT+TGG | - | chr8_4:15066222-15066241 | None:intergenic | 30.0% | |
| TTATTACTCTTCTCCATCTT+TGG | + | chr8_4:15066234-15066253 | Msa1315580:CDS | 30.0% | |
| TATTACTCTTCTCCATCTTT+GGG | + | chr8_4:15066235-15066254 | Msa1315580:CDS | 30.0% | |
| !!! | TCCAGCTGTGAATTTTTTAT+GGG | + | chr8_4:15066280-15066299 | Msa1315580:exon | 30.0% |
| !!! | GTGAATTTTTTATGGGTACA+AGG | + | chr8_4:15066287-15066306 | Msa1315580:exon | 30.0% |
| AGTTCCATGATAATCCTTTA+TGG | - | chr8_4:15066315-15066334 | None:intergenic | 30.0% | |
| ATAAAGGATTATCATGGAAC+TGG | + | chr8_4:15066314-15066333 | Msa1315580:three_prime_UTR | 30.0% | |
| TGTATACGAAATATTGGACA+TGG | + | chr8_4:15066379-15066398 | Msa1315580:three_prime_UTR | 30.0% | |
| AAGTATCAATACCAAGAAAC+TGG | - | chr8_4:15066452-15066471 | None:intergenic | 30.0% | |
| ACTCTTATTCTCTTACAATG+TGG | + | chr8_4:15066485-15066504 | Msa1315580:three_prime_UTR | 30.0% | |
| !!! | ATTATTTTTTTGGTGGTGTC+CGG | + | chr8_4:15066874-15066893 | Msa1315580:intron | 30.0% |
| ATAAATATATGCAAAGTCGC+GGG | - | chr8_4:15066906-15066925 | None:intergenic | 30.0% | |
| ATATTTGTGAGGTTGAAGAA+AGG | + | chr8_4:15067347-15067366 | Msa1315580:intron | 30.0% | |
| TATTTGTGAGGTTGAAGAAA+GGG | + | chr8_4:15067348-15067367 | Msa1315580:intron | 30.0% | |
| TATGGACCGGTTAAAAAAAA+TGG | + | chr8_4:15067534-15067553 | Msa1315580:intron | 30.0% | |
| GGTGCTTGTGAAATAAATTA+CGG | + | chr8_4:15067626-15067645 | Msa1315580:intron | 30.0% | |
| !! | TACATTTTTAAGGAGAAGCT+AGG | - | chr8_4:15067770-15067789 | None:intergenic | 30.0% |
| ! | TCAGCTTCTCTACATTTTTA+AGG | - | chr8_4:15067780-15067799 | None:intergenic | 30.0% |
| GAAAACAAATTCCAAAACGG+CGG | - | chr8_4:15061856-15061875 | None:intergenic | 35.0% | |
| !! | GCTGTTTCGTTTTCCAAAAA+GGG | + | chr8_4:15061876-15061895 | Msa1315580:five_prime_UTR | 35.0% |
| ! | CTGTTTCGTTTTCCAAAAAG+GGG | + | chr8_4:15061877-15061896 | Msa1315580:five_prime_UTR | 35.0% |
| AAGGGGCAAAATAATTAACG+CGG | + | chr8_4:15061894-15061913 | Msa1315580:five_prime_UTR | 35.0% | |
| GGTGAAAGAAAGAAGAAAAG+GGG | - | chr8_4:15061978-15061997 | None:intergenic | 35.0% | |
| GGGTGAAAGAAAGAAGAAAA+GGG | - | chr8_4:15061979-15061998 | None:intergenic | 35.0% | |
| TGGGTGAAAGAAAGAAGAAA+AGG | - | chr8_4:15061980-15061999 | None:intergenic | 35.0% | |
| TCACCCAATTCGATAATTCA+AGG | + | chr8_4:15061993-15062012 | Msa1315580:intron | 35.0% | |
| !!! | ATTGTTGATTTTGGAATCCG+TGG | + | chr8_4:15062175-15062194 | Msa1315580:intron | 35.0% |
| GGTATCTCAGAACATATTCA+TGG | + | chr8_4:15062615-15062634 | Msa1315580:intron | 35.0% | |
| ACATATTCATGGGAAATTGG+TGG | + | chr8_4:15062626-15062645 | Msa1315580:intron | 35.0% | |
| TTATGTAGGCATCTGAATTG+TGG | + | chr8_4:15062754-15062773 | Msa1315580:intron | 35.0% | |
| ATTTGGTCCATGTCTTTCAT+AGG | + | chr8_4:15062801-15062820 | Msa1315580:intron | 35.0% | |
| GTGTCGTGTCTTATAACATT+TGG | + | chr8_4:15062844-15062863 | Msa1315580:intron | 35.0% | |
| !!! | CATTTGGACAGCTTTTTTCA+TGG | + | chr8_4:15062860-15062879 | Msa1315580:intron | 35.0% |
| AGTCACTTGACTATCTCAAA+TGG | - | chr8_4:15063049-15063068 | None:intergenic | 35.0% | |
| AGAGCTATAGTAGAATAAGG+AGG | - | chr8_4:15063335-15063354 | None:intergenic | 35.0% | |
| CTGCACAACAAAATAAGCAT+TGG | - | chr8_4:15063760-15063779 | None:intergenic | 35.0% | |
| !! | TTAGCTTGTTCTGTGATCAT+TGG | + | chr8_4:15063788-15063807 | Msa1315580:intron | 35.0% |
| ACACACTATTAAGAGGAGAA+AGG | - | chr8_4:15063937-15063956 | None:intergenic | 35.0% | |
| ATGATCTAGGCAATTGATAC+AGG | - | chr8_4:15064031-15064050 | None:intergenic | 35.0% | |
| ! | TCAAGAATATCACTTGGTGA+AGG | - | chr8_4:15064140-15064159 | None:intergenic | 35.0% |
| ATCTCAGATTACGTATTGGA+AGG | + | chr8_4:15064461-15064480 | Msa1315580:intron | 35.0% | |
| GATAGTAATAAACTGGGTGT+TGG | - | chr8_4:15064579-15064598 | None:intergenic | 35.0% | |
| TGGAAAAATCAAGTTTCCTC+AGG | + | chr8_4:15064652-15064671 | Msa1315580:CDS | 35.0% | |
| GGTTTATAAGGATATTCCTG+AGG | - | chr8_4:15064671-15064690 | None:intergenic | 35.0% | |
| GAATATCCTTATAAACCTCC+TGG | + | chr8_4:15064674-15064693 | Msa1315580:CDS | 35.0% | |
| !! | AAATCGGTTTGTCTTCCAAT+GGG | - | chr8_4:15064867-15064886 | None:intergenic | 35.0% |
| TTGGTTGTATTGTTTGCACT+AGG | + | chr8_4:15065062-15065081 | Msa1315580:intron | 35.0% | |
| TGGTTGTATTGTTTGCACTA+GGG | + | chr8_4:15065063-15065082 | Msa1315580:intron | 35.0% | |
| TATGAATGCAGCATACTTAC+CGG | + | chr8_4:15065155-15065174 | Msa1315580:intron | 35.0% | |
| CAAACAAATGCCATATGAGA+TGG | - | chr8_4:15065249-15065268 | None:intergenic | 35.0% | |
| CAACAAAGACAAGACTACTA+TGG | - | chr8_4:15065654-15065673 | None:intergenic | 35.0% | |
| CATACATCGTGAAGAATAAC+AGG | - | chr8_4:15065799-15065818 | None:intergenic | 35.0% | |
| AAGGAAAGAGCCATTAATTG+TGG | - | chr8_4:15065981-15066000 | None:intergenic | 35.0% | |
| ! | TTGTTTTCCAAAACAGACCT+CGG | - | chr8_4:15066123-15066142 | None:intergenic | 35.0% |
| ATTACTCTTCTCCATCTTTG+GGG | + | chr8_4:15066236-15066255 | Msa1315580:CDS | 35.0% | |
| !!! | CTCCAGCTGTGAATTTTTTA+TGG | + | chr8_4:15066279-15066298 | Msa1315580:exon | 35.0% |
| ACCCATAAAAAATTCACAGC+TGG | - | chr8_4:15066284-15066303 | None:intergenic | 35.0% | |
| !! | TAGGTTTTGTCATGTCTAAC+AGG | + | chr8_4:15066353-15066372 | Msa1315580:three_prime_UTR | 35.0% |
| CTTATTCTCTTACAATGTGG+AGG | + | chr8_4:15066488-15066507 | Msa1315580:three_prime_UTR | 35.0% | |
| !! | AGGCTTGTTTCTTTTAGTGT+TGG | + | chr8_4:15066508-15066527 | Msa1315580:three_prime_UTR | 35.0% |
| AAACATACTGCAAATGATGC+TGG | + | chr8_4:15066536-15066555 | Msa1315580:three_prime_UTR | 35.0% | |
| AACATACTGCAAATGATGCT+GGG | + | chr8_4:15066537-15066556 | Msa1315580:three_prime_UTR | 35.0% | |
| ! | TTTTAGACCCAAAAAAAGCC+TGG | - | chr8_4:15066621-15066640 | None:intergenic | 35.0% |
| AGGAAAAAGCTAAAGCTGTT+TGG | + | chr8_4:15066676-15066695 | Msa1315580:intron | 35.0% | |
| TGTGTGTGTGTATATTTGTG+AGG | + | chr8_4:15067336-15067355 | Msa1315580:intron | 35.0% | |
| TAGAGAAGCTGAAAAAAAGC+CGG | + | chr8_4:15067788-15067807 | Msa1315580:intron | 35.0% | |
| ! | AAAAACTCTTAGGTACCGTT+TGG | - | chr8_4:15067815-15067834 | None:intergenic | 35.0% |
| !! | AGTCTAGAAGTGCGTTTTGT+AGG | - | chr8_4:15061800-15061819 | None:intergenic | 40.0% |
| !! | CGCTGTTTCGTTTTCCAAAA+AGG | + | chr8_4:15061875-15061894 | Msa1315580:five_prime_UTR | 40.0% |
| CCACCAATATTTGGGGAAAT+CGG | + | chr8_4:15061934-15061953 | Msa1315580:five_prime_UTR | 40.0% | |
| GATCCGATTTCCCCAAATAT+TGG | - | chr8_4:15061940-15061959 | None:intergenic | 40.0% | |
| GAAAGAAAGAAGAAAAGGGG+TGG | - | chr8_4:15061975-15061994 | None:intergenic | 40.0% | |
| !!! | TTGATTTTGGAATCCGTGGT+GGG | + | chr8_4:15062179-15062198 | Msa1315580:intron | 40.0% |
| AATTCCCATTATTCCCACCA+CGG | - | chr8_4:15062195-15062214 | None:intergenic | 40.0% | |
| ! | TGGTGGGAATAATGGGAATT+TGG | + | chr8_4:15062195-15062214 | Msa1315580:intron | 40.0% |
| ! | GGTGGGAATAATGGGAATTT+GGG | + | chr8_4:15062196-15062215 | Msa1315580:intron | 40.0% |
| ATTCAAGGGAGAGAAACATG+AGG | + | chr8_4:15062351-15062370 | Msa1315580:intron | 40.0% | |
| TGATGACTGTGAATCTGTGA+TGG | + | chr8_4:15062408-15062427 | Msa1315580:intron | 40.0% | |
| GATGACTGTGAATCTGTGAT+GGG | + | chr8_4:15062409-15062428 | Msa1315580:intron | 40.0% | |
| !!! | TTTTGAAGCACTGACCATAG+AGG | + | chr8_4:15062673-15062692 | Msa1315580:intron | 40.0% |
| !! | TTTGAAGCACTGACCATAGA+GGG | + | chr8_4:15062674-15062693 | Msa1315580:intron | 40.0% |
| GGATTTGTAGTTCCTTGTTG+AGG | + | chr8_4:15062822-15062841 | Msa1315580:intron | 40.0% | |
| !! | TGTGTTGGTTATGACTGAGT+TGG | + | chr8_4:15062943-15062962 | Msa1315580:intron | 40.0% |
| GATCCTAATTCGTACCATGA+TGG | + | chr8_4:15063138-15063157 | Msa1315580:intron | 40.0% | |
| GTTCATAATCAATGCTGAGC+AGG | + | chr8_4:15063542-15063561 | Msa1315580:intron | 40.0% | |
| GATTCAGAACAGAATCGAGA+AGG | - | chr8_4:15063609-15063628 | None:intergenic | 40.0% | |
| ! | TCTGTTCTGAATCAGTCGAA+TGG | + | chr8_4:15063616-15063635 | Msa1315580:exon | 40.0% |
| CTACAGTGTGTACTTCACAA+AGG | + | chr8_4:15063992-15064011 | Msa1315580:intron | 40.0% | |
| ! | AATATCACTTGGTGAAGGAC+GGG | - | chr8_4:15064135-15064154 | None:intergenic | 40.0% |
| ! | GAATATCACTTGGTGAAGGA+CGG | - | chr8_4:15064136-15064155 | None:intergenic | 40.0% |
| CACCAAGTGATATTCTTGAG+TGG | + | chr8_4:15064141-15064160 | Msa1315580:CDS | 40.0% | |
| GTTTCAGCTGTATTGTGTGT+TGG | + | chr8_4:15064543-15064562 | Msa1315580:intron | 40.0% | |
| CTGATTCCAGGAGGTTTATA+AGG | - | chr8_4:15064683-15064702 | None:intergenic | 40.0% | |
| CTTATAAACCTCCTGGAATC+AGG | + | chr8_4:15064681-15064700 | Msa1315580:CDS | 40.0% | |
| TCAAGAATGCTGCAACAAGA+AGG | - | chr8_4:15064709-15064728 | None:intergenic | 40.0% | |
| TGTAGCATGACAACACCTAA+TGG | + | chr8_4:15064784-15064803 | Msa1315580:intron | 40.0% | |
| GTAGCATGACAACACCTAAT+GGG | + | chr8_4:15064785-15064804 | Msa1315580:intron | 40.0% | |
| !! | CAAATCGGTTTGTCTTCCAA+TGG | - | chr8_4:15064868-15064887 | None:intergenic | 40.0% |
| TTGCAGTTCATCCTGAAAGT+TGG | + | chr8_4:15064942-15064961 | Msa1315580:intron | 40.0% | |
| CACATTGGATTCCAACTTTC+AGG | - | chr8_4:15064956-15064975 | None:intergenic | 40.0% | |
| CTGAAAGTTGGAATCCAATG+TGG | + | chr8_4:15064954-15064973 | Msa1315580:CDS | 40.0% | |
| ATCCAATGTGGTCTGTATCA+AGG | + | chr8_4:15064966-15064985 | Msa1315580:CDS | 40.0% | |
| GTATTGTTTGCACTAGGGAA+TGG | + | chr8_4:15065068-15065087 | Msa1315580:intron | 40.0% | |
| ATGAATGCAGCATACTTACC+GGG | + | chr8_4:15065156-15065175 | Msa1315580:intron | 40.0% | |
| TACCATGAATGAAAGAAGCC+CGG | - | chr8_4:15065177-15065196 | None:intergenic | 40.0% | |
| CTGGTTTCTTCCATCTCATA+TGG | + | chr8_4:15065236-15065255 | Msa1315580:intron | 40.0% | |
| GGCAAATGCAAGAGTGATAT+GGG | - | chr8_4:15065571-15065590 | None:intergenic | 40.0% | |
| AGGCAAATGCAAGAGTGATA+TGG | - | chr8_4:15065572-15065591 | None:intergenic | 40.0% | |
| ! | CTTGCATTTGCCTCTTTTAG+CGG | + | chr8_4:15065579-15065598 | Msa1315580:intron | 40.0% |
| ! | TGCCTCTTTTAGCGGTTTTT+TGG | + | chr8_4:15065587-15065606 | Msa1315580:intron | 40.0% |
| ! | GCCTCTTTTAGCGGTTTTTT+GGG | + | chr8_4:15065588-15065607 | Msa1315580:intron | 40.0% |
| ACCCAAAAAACCGCTAAAAG+AGG | - | chr8_4:15065592-15065611 | None:intergenic | 40.0% | |
| !!! | CTTTTAGCGGTTTTTTGGGT+AGG | + | chr8_4:15065592-15065611 | Msa1315580:intron | 40.0% |
| !!! | GTTTTTTGGGTAGGTTGGTT+GGG | + | chr8_4:15065601-15065620 | Msa1315580:intron | 40.0% |
| CTTATCAACACCTACAACAG+GGG | - | chr8_4:15065739-15065758 | None:intergenic | 40.0% | |
| GCTTATCAACACCTACAACA+GGG | - | chr8_4:15065740-15065759 | None:intergenic | 40.0% | |
| AGCTTATCAACACCTACAAC+AGG | - | chr8_4:15065741-15065760 | None:intergenic | 40.0% | |
| ! | ACAGACTTCTCTTTTGCAGA+TGG | + | chr8_4:15065819-15065838 | Msa1315580:intron | 40.0% |
| !! | ATTGCTCAATGTTGATGGTG+CGG | - | chr8_4:15065942-15065961 | None:intergenic | 40.0% |
| GAGACATTGCTCAATGTTGA+TGG | - | chr8_4:15065947-15065966 | None:intergenic | 40.0% | |
| ! | TAAAAGTCCGAGGTCTGTTT+TGG | + | chr8_4:15066113-15066132 | Msa1315580:CDS | 40.0% |
| GAAAACAATGTAGAGTCCAC+AGG | + | chr8_4:15066135-15066154 | Msa1315580:CDS | 40.0% | |
| CACAGGAGAAGACTTGAAAA+GGG | + | chr8_4:15066152-15066171 | Msa1315580:CDS | 40.0% | |
| AGAAGACTTGAAAAGGGTTG+AGG | + | chr8_4:15066158-15066177 | Msa1315580:CDS | 40.0% | |
| GAAGACTTGAAAAGGGTTGA+GGG | + | chr8_4:15066159-15066178 | Msa1315580:CDS | 40.0% | |
| GCGAGGAGAAACAAAAAACA+AGG | + | chr8_4:15066192-15066211 | Msa1315580:CDS | 40.0% | |
| AAAATTCACAGCTGGAGTAG+AGG | - | chr8_4:15066276-15066295 | None:intergenic | 40.0% | |
| GGGTCCATAAAGGATTATCA+TGG | + | chr8_4:15066308-15066327 | Msa1315580:three_prime_UTR | 40.0% | |
| TGGTTCTTCATGTTCTGCTT+AGG | + | chr8_4:15066334-15066353 | Msa1315580:three_prime_UTR | 40.0% | |
| !!! | GTCTGTTTTTGCCAGTTTCT+TGG | + | chr8_4:15066438-15066457 | Msa1315580:three_prime_UTR | 40.0% |
| AGAGAAGCTGAAAAAAAGCC+GGG | + | chr8_4:15067789-15067808 | Msa1315580:intron | 40.0% | |
| CCGATTTCCCCAAATATTGG+TGG | - | chr8_4:15061937-15061956 | None:intergenic | 45.0% | |
| ATTTGGGGAAATCGGATCTC+AGG | + | chr8_4:15061942-15061961 | Msa1315580:five_prime_UTR | 45.0% | |
| !!! | GTTGATTTTGGAATCCGTGG+TGG | + | chr8_4:15062178-15062197 | Msa1315580:intron | 45.0% |
| ! | GAATCCGTGGTGGGAATAAT+GGG | + | chr8_4:15062188-15062207 | Msa1315580:intron | 45.0% |
| !! | TGAGTGAATTTGGAGTGCTG+TGG | + | chr8_4:15062480-15062499 | Msa1315580:intron | 45.0% |
| !! | TTTGGAGTGCTGTGGTTTGT+TGG | + | chr8_4:15062488-15062507 | Msa1315580:intron | 45.0% |
| TATGCAGTGAGAGTTGTCCT+AGG | + | chr8_4:15062531-15062550 | Msa1315580:intron | 45.0% | |
| !! | TTGAAGCACTGACCATAGAG+GGG | + | chr8_4:15062675-15062694 | Msa1315580:intron | 45.0% |
| GAGAGTTATGAACCCCTCTA+TGG | - | chr8_4:15062690-15062709 | None:intergenic | 45.0% | |
| TAAGACACGACACCTCAACA+AGG | - | chr8_4:15062837-15062856 | None:intergenic | 45.0% | |
| CAGCCATCATGGTACGAATT+AGG | - | chr8_4:15063144-15063163 | None:intergenic | 45.0% | |
| TACTGATGACAGTTCACGTG+TGG | + | chr8_4:15063184-15063203 | Msa1315580:intron | 45.0% | |
| ACTGATGACAGTTCACGTGT+GGG | + | chr8_4:15063185-15063204 | Msa1315580:intron | 45.0% | |
| ! | GTTCTGAATCAGTCGAATGG+CGG | + | chr8_4:15063619-15063638 | Msa1315580:exon | 45.0% |
| GTGCTCTATACTCCTTCTGA+AGG | - | chr8_4:15063664-15063683 | None:intergenic | 45.0% | |
| CAGTGTGTACTTCACAAAGG+TGG | + | chr8_4:15063995-15064014 | Msa1315580:intron | 45.0% | |
| CGCCACTCAAGAATATCACT+TGG | - | chr8_4:15064146-15064165 | None:intergenic | 45.0% | |
| GTAGAACCCATATGACCAAC+TGG | + | chr8_4:15064276-15064295 | Msa1315580:intron | 45.0% | |
| TTGCGACCAGTTGGTCATAT+GGG | - | chr8_4:15064285-15064304 | None:intergenic | 45.0% | |
| !! | CAAACCTTACTTTTGCTCGC+AGG | + | chr8_4:15064310-15064329 | Msa1315580:intron | 45.0% |
| TTACGTATTGGAAGGAAGCG+AGG | + | chr8_4:15064469-15064488 | Msa1315580:CDS | 45.0% | |
| TACGTATTGGAAGGAAGCGA+GGG | + | chr8_4:15064470-15064489 | Msa1315580:CDS | 45.0% | |
| GACCTTGATACAGACCACAT+TGG | - | chr8_4:15064971-15064990 | None:intergenic | 45.0% | |
| TACCGGGCTTCTTTCATTCA+TGG | + | chr8_4:15065172-15065191 | Msa1315580:CDS | 45.0% | |
| !!! | TAGCGGTTTTTTGGGTAGGT+TGG | + | chr8_4:15065596-15065615 | Msa1315580:intron | 45.0% |
| !!! | GGTTTTTTGGGTAGGTTGGT+TGG | + | chr8_4:15065600-15065619 | Msa1315580:intron | 45.0% |
| AGTAGTGTTTACACTGCCAG+TGG | - | chr8_4:15065857-15065876 | None:intergenic | 45.0% | |
| ! | TTTTGCTAGACGCTGCTTCT+CGG | - | chr8_4:15065884-15065903 | None:intergenic | 45.0% |
| TTCCTTGCAGTGCAACATTC+AGG | + | chr8_4:15065995-15066014 | Msa1315580:intron | 45.0% | |
| TTCCTGAATGTTGCACTGCA+AGG | - | chr8_4:15066000-15066019 | None:intergenic | 45.0% | |
| TTGTACTTCTCCACGTACTC+GGG | - | chr8_4:15066030-15066049 | None:intergenic | 45.0% | |
| GTTGTACTTCTCCACGTACT+CGG | - | chr8_4:15066031-15066050 | None:intergenic | 45.0% | |
| CTGGTCAAGATAAAAGTCCG+AGG | + | chr8_4:15066103-15066122 | Msa1315580:CDS | 45.0% | |
| !!! | CCTTTTCAAGTCTTCTCCTG+TGG | - | chr8_4:15066154-15066173 | None:intergenic | 45.0% |
| CCACAGGAGAAGACTTGAAA+AGG | + | chr8_4:15066151-15066170 | Msa1315580:CDS | 45.0% | |
| GAAAAGGGTTGAGGGATTGA+AGG | + | chr8_4:15066167-15066186 | Msa1315580:CDS | 45.0% | |
| !! | CTCCATCTTTGGGGTTGTTA+TGG | + | chr8_4:15066245-15066264 | Msa1315580:CDS | 45.0% |
| TGCCATAACAACCCCAAAGA+TGG | - | chr8_4:15066250-15066269 | None:intergenic | 45.0% | |
| ATGGGTACAAGGGTCCATAA+AGG | + | chr8_4:15066298-15066317 | Msa1315580:three_prime_UTR | 45.0% | |
| ACTGGCAAAAACAGACACGA+AGG | - | chr8_4:15066434-15066453 | None:intergenic | 45.0% | |
| !! | TATTAAGGTACCGTTTGGCC+AGG | + | chr8_4:15066600-15066619 | Msa1315580:intron | 45.0% |
| CCAAAAAAAGCCTGGCCAAA+CGG | - | chr8_4:15066613-15066632 | None:intergenic | 45.0% | |
| !!! | CGTTTGGCCAGGCTTTTTTT+GGG | + | chr8_4:15066611-15066630 | Msa1315580:intron | 45.0% |
| TGAAAAAAAGCCGGGCCAAA+CGG | + | chr8_4:15067797-15067816 | Msa1315580:intron | 45.0% | |
| !!! | TATATAAGTATATTTTTTTT+AGG | + | chr8_4:15067170-15067189 | Msa1315580:intron | 5.0% |
| ! | TCTCTTAAACGCCGCCGTTT+TGG | + | chr8_4:15061842-15061861 | Msa1315580:five_prime_UTR | 50.0% |
| ! | GGAATCCGTGGTGGGAATAA+TGG | + | chr8_4:15062187-15062206 | Msa1315580:intron | 50.0% |
| ATGCATCAAGCGCCTTCAGA+AGG | + | chr8_4:15063649-15063668 | Msa1315580:CDS | 50.0% | |
| GGAGCCAGTTTCCCATATTG+TGG | + | chr8_4:15064109-15064128 | Msa1315580:intron | 50.0% | |
| TGAAGGACGGGCCACAATAT+GGG | - | chr8_4:15064123-15064142 | None:intergenic | 50.0% | |
| GTTGCGACCAGTTGGTCATA+TGG | - | chr8_4:15064286-15064305 | None:intergenic | 50.0% | |
| AGAGCCTGCGAGCAAAAGTA+AGG | - | chr8_4:15064317-15064336 | None:intergenic | 50.0% | |
| !! | ACAAGAAGGCACCTGATTCC+AGG | - | chr8_4:15064695-15064714 | None:intergenic | 50.0% |
| GCATGACAACACCTAATGGG+CGG | + | chr8_4:15064788-15064807 | Msa1315580:intron | 50.0% | |
| TGTGTCATGAACCGCCCATT+AGG | - | chr8_4:15064802-15064821 | None:intergenic | 50.0% | |
| !! | TTTGGGTAGGTTGGTTGGGA+TGG | + | chr8_4:15065605-15065624 | Msa1315580:intron | 50.0% |
| !! | TTGGGTAGGTTGGTTGGGAT+GGG | + | chr8_4:15065606-15065625 | Msa1315580:intron | 50.0% |
| TTGTTAGGCTCCCCTGTTGT+AGG | + | chr8_4:15065726-15065745 | Msa1315580:intron | 50.0% | |
| ATGGATACCAGTCCAACCAC+TGG | + | chr8_4:15065838-15065857 | Msa1315580:CDS | 50.0% | |
| GTGTTTACACTGCCAGTGGT+TGG | - | chr8_4:15065853-15065872 | None:intergenic | 50.0% | |
| TGTACTTCTCCACGTACTCG+GGG | - | chr8_4:15066029-15066048 | None:intergenic | 50.0% | |
| ! | TGACCAGTCTCTGATGACGT+TGG | - | chr8_4:15066090-15066109 | None:intergenic | 50.0% |
| TTGAGGGATTGAAGGATGCG+AGG | + | chr8_4:15066175-15066194 | Msa1315580:CDS | 50.0% | |
| !!! | CCGTTTGGCCAGGCTTTTTT+TGG | + | chr8_4:15066610-15066629 | Msa1315580:intron | 50.0% |
| ! | TGCCTGAGTGAGTTGAAGAG+AGG | + | chr8_4:15067605-15067624 | Msa1315580:intron | 50.0% |
| CACCTCTCTTCAACTCACTC+AGG | - | chr8_4:15067610-15067629 | None:intergenic | 50.0% | |
| ACACGTGTGAGCAGCCATCA+TGG | - | chr8_4:15063155-15063174 | None:intergenic | 55.0% | |
| CGGGCCACAATATGGGAAAC+TGG | - | chr8_4:15064116-15064135 | None:intergenic | 55.0% | |
| GTGAAGGACGGGCCACAATA+TGG | - | chr8_4:15064124-15064143 | None:intergenic | 55.0% | |
| TTTGCTGCGTTGCGACCAGT+TGG | - | chr8_4:15064294-15064313 | None:intergenic | 55.0% | |
| AGCGAGGGAACACCTTTCTC+AGG | + | chr8_4:15064485-15064504 | Msa1315580:CDS | 55.0% | |
| !! | AGAAGGCACCTGATTCCAGG+AGG | - | chr8_4:15064692-15064711 | None:intergenic | 55.0% |
| !! | GTAGGTTGGTTGGGATGGGA+GGG | + | chr8_4:15065610-15065629 | Msa1315580:intron | 55.0% |
| !! | TAGGTTGGTTGGGATGGGAG+GGG | + | chr8_4:15065611-15065630 | Msa1315580:intron | 55.0% |
| TACACTGCCAGTGGTTGGAC+TGG | - | chr8_4:15065848-15065867 | None:intergenic | 55.0% | |
| GAAGATGTTCCCCGAGTACG+TGG | + | chr8_4:15066017-15066036 | Msa1315580:CDS | 55.0% | |
| CAGCCAACGTCATCAGAGAC+TGG | + | chr8_4:15066084-15066103 | Msa1315580:CDS | 55.0% | |
| ! | CTCTTAGGTACCGTTTGGCC+CGG | - | chr8_4:15067810-15067829 | None:intergenic | 55.0% |
| ! | AGTGTGGTTGGTCGTGAGTG+TGG | + | chr8_4:15067840-15067859 | Msa1315580:three_prime_UTR | 55.0% |
| !! | GGTAGGTTGGTTGGGATGGG+AGG | + | chr8_4:15065609-15065628 | Msa1315580:intron | 60.0% |
| GCAAAGTCGCGGGTTCGAAC+CGG | - | chr8_4:15066896-15066915 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_4 | gene | 15061771 | 15067945 | 15061771 | ID=Msa1315580;Name=Msa1315580 |
| chr8_4 | mRNA | 15061771 | 15067945 | 15061771 | ID=Msa1315580-mRNA-1;Parent=Msa1315580;Name=Msa1315580-mRNA-1;_AED=0.10;_eAED=0.10;_QI=264|0.9|0.90|1|0.8|0.63|11|434|245 |
| chr8_4 | exon | 15061771 | 15061963 | 15061771 | ID=Msa1315580-mRNA-1:exon:5692;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15063564 | 15063691 | 15063564 | ID=Msa1315580-mRNA-1:exon:5693;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15064110 | 15064164 | 15064110 | ID=Msa1315580-mRNA-1:exon:5694;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15064468 | 15064506 | 15064468 | ID=Msa1315580-mRNA-1:exon:5695;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15064639 | 15064702 | 15064639 | ID=Msa1315580-mRNA-1:exon:5696;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15064789 | 15064850 | 15064789 | ID=Msa1315580-mRNA-1:exon:5697;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15064948 | 15064987 | 15064948 | ID=Msa1315580-mRNA-1:exon:5698;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15065166 | 15065193 | 15065166 | ID=Msa1315580-mRNA-1:exon:5699;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15065823 | 15065929 | 15065823 | ID=Msa1315580-mRNA-1:exon:5700;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15066005 | 15066606 | 15066005 | ID=Msa1315580-mRNA-1:exon:5701;Parent=Msa1315580-mRNA-1 |
| chr8_4 | exon | 15067828 | 15067945 | 15067828 | ID=Msa1315580-mRNA-1:exon:5702;Parent=Msa1315580-mRNA-1 |
| chr8_4 | five_prime_UTR | 15061771 | 15061963 | 15061771 | ID=Msa1315580-mRNA-1:five_prime_utr;Parent=Msa1315580-mRNA-1 |
| chr8_4 | five_prime_UTR | 15063564 | 15063634 | 15063564 | ID=Msa1315580-mRNA-1:five_prime_utr;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15063635 | 15063691 | 15063635 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15064110 | 15064164 | 15064110 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15064468 | 15064506 | 15064468 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15064639 | 15064702 | 15064639 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15064789 | 15064850 | 15064789 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15064948 | 15064987 | 15064948 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15065166 | 15065193 | 15065166 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15065823 | 15065929 | 15065823 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | CDS | 15066005 | 15066290 | 15066005 | ID=Msa1315580-mRNA-1:cds;Parent=Msa1315580-mRNA-1 |
| chr8_4 | three_prime_UTR | 15066291 | 15066606 | 15066291 | ID=Msa1315580-mRNA-1:three_prime_utr;Parent=Msa1315580-mRNA-1 |
| chr8_4 | three_prime_UTR | 15067828 | 15067945 | 15067828 | ID=Msa1315580-mRNA-1:three_prime_utr;Parent=Msa1315580-mRNA-1 |
| Gene Sequence |
| Protein sequence |
