Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352270 | XP_003630707.2 | 99.398 | 498 | 3 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1010 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352270 | sp|Q9SEK3|HXK1_SPIOL | 78.481 | 474 | 102 | 0 | 25 | 498 | 25 | 498 | 0.0 | 780 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352270 | G7L7F0 | 99.398 | 498 | 3 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1010 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0035090 | Msa1352270 | 0.821124 | 4.769281e-53 | -8.615850e-47 |
| Msa0046700 | Msa1352270 | 0.812119 | 4.976150e-51 | -8.615850e-47 |
| Msa0046860 | Msa1352270 | 0.812584 | 3.938176e-51 | -8.615850e-47 |
| Msa0081300 | Msa1352270 | 0.817330 | 3.488157e-52 | -8.615850e-47 |
| Msa0083570 | Msa1352270 | 0.847735 | 9.578813e-60 | -8.615850e-47 |
| Msa1348770 | Msa1352270 | 0.825423 | 4.726243e-54 | -8.615850e-47 |
| Msa1352270 | Msa1353040 | 0.808172 | 3.528881e-50 | -8.615850e-47 |
| Msa1352270 | Msa1364520 | 0.828976 | 6.663753e-55 | -8.615850e-47 |
| Msa1352270 | Msa1376530 | 0.803467 | 3.438427e-49 | -8.615850e-47 |
| Msa1352270 | Msa1385940 | 0.802472 | 5.520807e-49 | -8.615850e-47 |
| Msa1352270 | Msa1387650 | 0.806649 | 7.422788e-50 | -8.615850e-47 |
| Msa1352270 | Msa1412750 | 0.805982 | 1.026192e-49 | -8.615850e-47 |
| Msa1352270 | Msa1413220 | 0.809663 | 1.692661e-50 | -8.615850e-47 |
| Msa1352270 | Msa1419040 | 0.810132 | 1.341964e-50 | -8.615850e-47 |
| Msa1352270 | Msa1426870 | 0.803172 | 3.957571e-49 | -8.615850e-47 |
| Msa1352270 | Msa1429390 | 0.825038 | 5.829677e-54 | -8.615850e-47 |
| Msa1352270 | Msa1437690 | 0.822306 | 2.542039e-53 | -8.615850e-47 |
| Msa0606140 | Msa1352270 | 0.809079 | 2.259092e-50 | -8.615850e-47 |
| Msa0619170 | Msa1352270 | 0.801217 | 9.991553e-49 | -8.615850e-47 |
| Msa0622400 | Msa1352270 | 0.814047 | 1.879112e-51 | -8.615850e-47 |
| Msa0624240 | Msa1352270 | 0.807741 | 4.358023e-50 | -8.615850e-47 |
| Msa0639040 | Msa1352270 | 0.820775 | 5.737853e-53 | -8.615850e-47 |
| Msa0643590 | Msa1352270 | 0.803791 | 2.944620e-49 | -8.615850e-47 |
| Msa0647110 | Msa1352270 | 0.802291 | 6.016269e-49 | -8.615850e-47 |
| Msa0659640 | Msa1352270 | 0.802273 | 6.066979e-49 | -8.615850e-47 |
| Msa0670490 | Msa1352270 | 0.803868 | 2.838728e-49 | -8.615850e-47 |
| Msa0704720 | Msa1352270 | 0.814041 | 1.885357e-51 | -8.615850e-47 |
| Msa0705030 | Msa1352270 | 0.805651 | 1.204543e-49 | -8.615850e-47 |
| Msa0707610 | Msa1352270 | 0.990055 | 7.455081e-181 | -8.615850e-47 |
| Msa0733570 | Msa1352270 | 0.807191 | 5.702191e-50 | -8.615850e-47 |
| Msa0734430 | Msa1352270 | 0.811222 | 7.800872e-51 | -8.615850e-47 |
| Msa0749940 | Msa1352270 | 0.806343 | 8.612458e-50 | -8.615850e-47 |
| Msa0755570 | Msa1352270 | 0.808090 | 3.673434e-50 | -8.615850e-47 |
| Msa0774090 | Msa1352270 | 0.810671 | 1.026639e-50 | -8.615850e-47 |
| Msa0774680 | Msa1352270 | 0.812895 | 3.367531e-51 | -8.615850e-47 |
| Msa0812230 | Msa1352270 | 0.804011 | 2.650989e-49 | -8.615850e-47 |
| Msa0814760 | Msa1352270 | 0.821060 | 4.934577e-53 | -8.615850e-47 |
| Msa0821490 | Msa1352270 | 0.809101 | 2.234963e-50 | -8.615850e-47 |
| Msa0830410 | Msa1352270 | 0.811911 | 5.523108e-51 | -8.615850e-47 |
| Msa0835030 | Msa1352270 | 0.816157 | 6.390788e-52 | -8.615850e-47 |
| Msa0130120 | Msa1352270 | 0.831055 | 2.073157e-55 | -8.615850e-47 |
| Msa0131230 | Msa1352270 | 0.822444 | 2.360859e-53 | -8.615850e-47 |
| Msa0141770 | Msa1352270 | 0.804382 | 2.218566e-49 | -8.615850e-47 |
| Msa0143360 | Msa1352270 | 0.802954 | 4.389871e-49 | -8.615850e-47 |
| Msa0149070 | Msa1352270 | 0.804289 | 2.320561e-49 | -8.615850e-47 |
| Msa0175900 | Msa1352270 | 0.841234 | 5.376567e-58 | -8.615850e-47 |
| Msa0182610 | Msa1352270 | 0.803614 | 3.204820e-49 | -8.615850e-47 |
| Msa0185550 | Msa1352270 | 0.801693 | 7.980975e-49 | -8.615850e-47 |
| Msa0186750 | Msa1352270 | 0.820581 | 6.359823e-53 | -8.615850e-47 |
| Msa0190000 | Msa1352270 | 0.821051 | 4.957702e-53 | -8.615850e-47 |
| Msa0202630 | Msa1352270 | 0.804876 | 1.750376e-49 | -8.615850e-47 |
| Msa0215980 | Msa1352270 | 0.810818 | 9.540366e-51 | -8.615850e-47 |
| Msa0218730 | Msa1352270 | 0.801962 | 7.029437e-49 | -8.615850e-47 |
| Msa1244260 | Msa1352270 | 0.812714 | 3.689987e-51 | -8.615850e-47 |
| Msa1263460 | Msa1352270 | 0.812911 | 3.339829e-51 | -8.615850e-47 |
| Msa1269550 | Msa1352270 | 0.806303 | 8.782542e-50 | -8.615850e-47 |
| Msa1277600 | Msa1352270 | 0.821826 | 3.284428e-53 | -8.615850e-47 |
| Msa1302750 | Msa1352270 | 0.805089 | 1.579590e-49 | -8.615850e-47 |
| Msa1310300 | Msa1352270 | 0.841567 | 4.395108e-58 | -8.615850e-47 |
| Msa1334690 | Msa1352270 | 0.819781 | 9.700592e-53 | -8.615850e-47 |
| Msa1339250 | Msa1352270 | 0.802107 | 6.564451e-49 | -8.615850e-47 |
| Msa0369770 | Msa1352270 | 0.804083 | 2.561404e-49 | -8.615850e-47 |
| Msa0374400 | Msa1352270 | 0.801852 | 7.404258e-49 | -8.615850e-47 |
| Msa0377460 | Msa1352270 | 0.842185 | 3.017367e-58 | -8.615850e-47 |
| Msa0380420 | Msa1352270 | 0.804683 | 1.919975e-49 | -8.615850e-47 |
| Msa0399180 | Msa1352270 | 0.829240 | 5.750688e-55 | -8.615850e-47 |
| Msa0423110 | Msa1352270 | 0.821784 | 3.357971e-53 | -8.615850e-47 |
| Msa0426860 | Msa1352270 | 0.802284 | 6.033993e-49 | -8.615850e-47 |
| Msa0426890 | Msa1352270 | 0.814171 | 1.764639e-51 | -8.615850e-47 |
| Msa0429560 | Msa1352270 | 0.810109 | 1.357145e-50 | -8.615850e-47 |
| Msa0436310 | Msa1352270 | 0.817377 | 3.402694e-52 | -8.615850e-47 |
| Msa0463980 | Msa1352270 | 0.811916 | 5.509171e-51 | -8.615850e-47 |
| Msa0466830 | Msa1352270 | 0.813920 | 2.004497e-51 | -8.615850e-47 |
| Msa0473320 | Msa1352270 | 0.824088 | 9.755269e-54 | -8.615850e-47 |
| Msa0476150 | Msa1352270 | 0.809911 | 1.496955e-50 | -8.615850e-47 |
| Msa0482020 | Msa1352270 | 0.819182 | 1.328387e-52 | -8.615850e-47 |
| Msa1042380 | Msa1352270 | 0.805251 | 1.460613e-49 | -8.615850e-47 |
| Msa1054620 | Msa1352270 | 0.809694 | 1.666984e-50 | -8.615850e-47 |
| Msa1090230 | Msa1352270 | 0.802265 | 6.089191e-49 | -8.615850e-47 |
| Msa0270230 | Msa1352270 | 0.807889 | 4.054658e-50 | -8.615850e-47 |
| Msa0284260 | Msa1352270 | 0.818114 | 2.320583e-52 | -8.615850e-47 |
| Msa0290040 | Msa1352270 | 0.801488 | 8.793303e-49 | -8.615850e-47 |
| Msa0304870 | Msa1352270 | 0.826221 | 3.054871e-54 | -8.615850e-47 |
| Msa0307460 | Msa1352270 | 0.817866 | 2.640156e-52 | -8.615850e-47 |
| Msa0311910 | Msa1352270 | 0.813752 | 2.183508e-51 | -8.615850e-47 |
| Msa0324060 | Msa1352270 | 0.815454 | 9.167707e-52 | -8.615850e-47 |
| Msa0341260 | Msa1352270 | 0.828186 | 1.033964e-54 | -8.615850e-47 |
| Msa1121630 | Msa1352270 | 0.810308 | 1.229627e-50 | -8.615850e-47 |
| Msa1125100 | Msa1352270 | 0.803579 | 3.259257e-49 | -8.615850e-47 |
| Msa1125150 | Msa1352270 | 0.810068 | 1.385243e-50 | -8.615850e-47 |
| Msa1128350 | Msa1352270 | 0.811597 | 6.464849e-51 | -8.615850e-47 |
| Msa1132540 | Msa1352270 | 0.802149 | 6.433019e-49 | -8.615850e-47 |
| Msa1173410 | Msa1352270 | 0.811165 | 8.025829e-51 | -8.615850e-47 |
| Msa1189630 | Msa1352270 | 0.835720 | 1.424047e-56 | -8.615850e-47 |
| Msa1190320 | Msa1352270 | 0.805647 | 1.206898e-49 | -8.615850e-47 |
| Msa1198420 | Msa1352270 | 0.807771 | 4.294315e-50 | -8.615850e-47 |
| Msa1206440 | Msa1352270 | 0.803294 | 3.733415e-49 | -8.615850e-47 |
| Msa1209390 | Msa1352270 | 0.824603 | 7.382559e-54 | -8.615850e-47 |
| Msa1218720 | Msa1352270 | 0.815707 | 8.054826e-52 | -8.615850e-47 |
| Msa1224140 | Msa1352270 | 0.813183 | 2.911515e-51 | -8.615850e-47 |
| Msa1224150 | Msa1352270 | 0.820025 | 8.528999e-53 | -8.615850e-47 |
| Msa0486200 | Msa1352270 | 0.813356 | 2.667958e-51 | -8.615850e-47 |
| Msa0486240 | Msa1352270 | 0.812000 | 5.284166e-51 | -8.615850e-47 |
| Msa0504740 | Msa1352270 | 0.820429 | 6.892004e-53 | -8.615850e-47 |
| Msa0509530 | Msa1352270 | 0.805798 | 1.121711e-49 | -8.615850e-47 |
| Msa0514630 | Msa1352270 | 0.801382 | 9.243288e-49 | -8.615850e-47 |
| Msa0517400 | Msa1352270 | 0.835287 | 1.832105e-56 | -8.615850e-47 |
| Msa0550720 | Msa1352270 | 0.808467 | 3.053148e-50 | -8.615850e-47 |
| Msa0560380 | Msa1352270 | 0.803292 | 3.737902e-49 | -8.615850e-47 |
| Msa0562040 | Msa1352270 | 0.810650 | 1.037181e-50 | -8.615850e-47 |
| Msa0577110 | Msa1352270 | 0.808181 | 3.513608e-50 | -8.615850e-47 |
| Msa0851870 | Msa1352270 | 0.801839 | 7.451458e-49 | -8.615850e-47 |
| Msa0893390 | Msa1352270 | 0.800921 | 1.148448e-48 | -8.615850e-47 |
| Msa0900320 | Msa1352270 | 0.823617 | 1.257907e-53 | -8.615850e-47 |
| Msa0910650 | Msa1352270 | 0.829495 | 4.985688e-55 | -8.615850e-47 |
| Msa0930160 | Msa1352270 | 0.834381 | 3.096884e-56 | -8.615850e-47 |
| Msa0944100 | Msa1352270 | 0.800493 | 1.404527e-48 | -8.615850e-47 |
| Msa0959970 | Msa1352270 | 0.828979 | 6.652335e-55 | -8.615850e-47 |
| Msa0968010 | Msa1352270 | 0.801901 | 7.234242e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352270 | MtrunA17_Chr8g0389821 | 99.398 | 498 | 3 | 0 | 1 | 498 | 1 | 498 | 0.0 | 1010 |
| Msa1352270 | MtrunA17_Chr6g0487071 | 78.541 | 466 | 100 | 0 | 33 | 498 | 31 | 496 | 0.0 | 766 |
| Msa1352270 | MtrunA17_Chr8g0340741 | 73.022 | 493 | 132 | 1 | 1 | 493 | 1 | 492 | 0.0 | 741 |
| Msa1352270 | MtrunA17_Chr1g0156571 | 57.616 | 453 | 190 | 2 | 40 | 492 | 42 | 492 | 0.0 | 521 |
| Msa1352270 | MtrunA17_Chr5g0396421 | 57.660 | 470 | 187 | 5 | 30 | 490 | 30 | 496 | 0.0 | 521 |
| Msa1352270 | MtrunA17_Chr4g0054541 | 57.595 | 158 | 65 | 1 | 228 | 385 | 5 | 160 | 1.57e-57 | 188 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1352270 | AT4G29130.1 | 77.079 | 493 | 113 | 0 | 1 | 493 | 1 | 493 | 0.0 | 763 |
| Msa1352270 | AT2G19860.1 | 75.453 | 497 | 122 | 0 | 1 | 497 | 1 | 497 | 0.0 | 760 |
| Msa1352270 | AT2G19860.2 | 75.258 | 388 | 96 | 0 | 110 | 497 | 1 | 388 | 0.0 | 613 |
| Msa1352270 | AT1G50460.1 | 53.911 | 473 | 205 | 4 | 26 | 488 | 26 | 495 | 1.46e-176 | 506 |
| Msa1352270 | AT3G20040.1 | 52.429 | 494 | 227 | 3 | 1 | 488 | 1 | 492 | 7.26e-168 | 484 |
| Msa1352270 | AT1G47840.1 | 52.954 | 457 | 211 | 4 | 37 | 492 | 40 | 493 | 2.33e-165 | 477 |
| Msa1352270 | AT1G50460.3 | 51.970 | 406 | 182 | 4 | 93 | 488 | 17 | 419 | 2.11e-141 | 413 |
| Msa1352270 | AT1G50460.2 | 56.495 | 331 | 142 | 2 | 26 | 356 | 26 | 354 | 4.97e-130 | 382 |
| Msa1352270 | AT4G37840.1 | 46.187 | 459 | 235 | 5 | 32 | 487 | 33 | 482 | 7.80e-127 | 379 |
| Msa1352270 | AT1G47840.2 | 56.075 | 321 | 138 | 3 | 37 | 356 | 40 | 358 | 1.06e-118 | 354 |
| Msa1352270 | AT1G47845.1 | 45.882 | 170 | 79 | 4 | 255 | 423 | 26 | 183 | 1.85e-39 | 141 |
Find 162 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTTGCTGCTGCTGGTATTT+TGG | 0.070351 | tig0012581:+151563 | Msa1352270:CDS |
| AGCTTCTCACTCTCAGTATT+TGG | 0.121428 | tig0012581:+151797 | Msa1352270:CDS |
| CTTACCATATCTCCTGATTT+TGG | 0.171892 | tig0012581:-150324 | None:intergenic |
| GGTGCTCCTTGGTCGGTAAC+AGG | 0.206605 | tig0012581:+151988 | Msa1352270:three_prime_UTR |
| CATTAACTTCACACACAAAA+TGG | 0.219310 | tig0012581:-152410 | None:intergenic |
| AGCTACTATGCCTTAGTTAT+TGG | 0.231214 | tig0012581:+151921 | Msa1352270:three_prime_UTR |
| TCTTGATCATATTCGGTTAA+AGG | 0.239859 | tig0012581:-150495 | None:intergenic |
| GTTATTGCCAAGGTAATTAA+AGG | 0.248601 | tig0012581:+151838 | Msa1352270:three_prime_UTR |
| TGAATTCAATCAAATTGTTT+TGG | 0.264450 | tig0012581:+152340 | Msa1352270:three_prime_UTR |
| AAACCCTGCAATCAAAATAA+TGG | 0.272084 | tig0012581:-152016 | None:intergenic |
| TGTCTCTTCCTAGTTTCTTC+AGG | 0.289084 | tig0012581:-151590 | None:intergenic |
| GTGGCATACCTAAGTATAAA+AGG | 0.291655 | tig0012581:-150756 | None:intergenic |
| CTTCCAACCTCTTTCAGATC+TGG | 0.295103 | tig0012581:-151328 | None:intergenic |
| CGTGTCCTTCGTGTACATTT+AGG | 0.310233 | tig0012581:+148962 | Msa1352270:CDS |
| AAGCAAATTGAAGGATATAT+TGG | 0.315046 | tig0012581:+151348 | Msa1352270:CDS |
| TGGCATAAGGCCATGCCATT+TGG | 0.317100 | tig0012581:-150304 | None:intergenic |
| ATCAAGATCTTGATCATATT+CGG | 0.322885 | tig0012581:-150502 | None:intergenic |
| ATTACCTTGGCAATAACATT+AGG | 0.332025 | tig0012581:-151832 | None:intergenic |
| GCAATTGAGGTTTGCTTCAC+AGG | 0.339001 | tig0012581:-149260 | None:intergenic |
| GGCATAAGGCCATGCCATTT+GGG | 0.361343 | tig0012581:-150303 | None:intergenic |
| GCTTCTCACTCTCAGTATTT+GGG | 0.370715 | tig0012581:+151798 | Msa1352270:CDS |
| AGCAAGGCGTGCACCGCGAC+TGG | 0.377407 | tig0012581:-151547 | None:intergenic |
| TAGATCTGATTCTGTGGGAT+TGG | 0.378933 | tig0012581:-147577 | None:intergenic |
| TATGTTGATAATCTTCCTAC+TGG | 0.383423 | tig0012581:+148081 | Msa1352270:CDS |
| TCTACTATTGTTGTTAGTAC+TGG | 0.383717 | tig0012581:+152211 | Msa1352270:three_prime_UTR |
| ATTGCTTTCTGGCATGTACT+TGG | 0.384273 | tig0012581:+150650 | Msa1352270:CDS |
| CGCCGCGGCACAAACGGCGG+CGG | 0.385038 | tig0012581:-147869 | None:intergenic |
| GCTGCTGTGATTCTCGGTAC+TGG | 0.385075 | tig0012581:+150243 | Msa1352270:CDS |
| TGACAGTGCAGTTAGGAGTT+AGG | 0.389672 | tig0012581:-147646 | None:intergenic |
| CACTAAATTCAGAGTTTGCT+TGG | 0.390939 | tig0012581:+151677 | Msa1352270:CDS |
| AAGAGCCGCCGCGGCACAAA+CGG | 0.391798 | tig0012581:-147875 | None:intergenic |
| AAGCAAACCTCAATTGCATC+TGG | 0.396002 | tig0012581:+149266 | Msa1352270:CDS |
| AATAAAGTTTCCGACTTTGT+TGG | 0.396209 | tig0012581:+147794 | Msa1352270:five_prime_UTR |
| AGATCTGATTCTGTGGGATT+GGG | 0.401230 | tig0012581:-147576 | None:intergenic |
| GGTGCACGCCTTGCTGCTGC+TGG | 0.404478 | tig0012581:+151555 | Msa1352270:CDS |
| CAGGCTACATTCCGCAAAAC+AGG | 0.408393 | tig0012581:-152097 | None:intergenic |
| TTGTTGTGTGATTAACTAAA+CGG | 0.409138 | tig0012581:+147541 | None:intergenic |
| ATCATAATTACCTGTTCTCC+AGG | 0.409907 | tig0012581:-150540 | None:intergenic |
| GTCATTGCTGCTGTGATTCT+CGG | 0.415176 | tig0012581:+150237 | Msa1352270:CDS |
| AACCCTGCAATCAAAATAAT+GGG | 0.419100 | tig0012581:-152015 | None:intergenic |
| CACGCTTACCTCTGAAGAAC+CGG | 0.421516 | tig0012581:-149050 | None:intergenic |
| TGCCGCCGCCGTTTGTGCCG+CGG | 0.424501 | tig0012581:+147867 | Msa1352270:CDS |
| TATGCCAAAATCAGGAGATA+TGG | 0.424699 | tig0012581:+150320 | Msa1352270:CDS |
| ATTTATTTATAGTTGAAAAC+AGG | 0.430184 | tig0012581:-152116 | None:intergenic |
| GTAGGTTATAAACATGGAAT+GGG | 0.432293 | tig0012581:+150449 | Msa1352270:intron |
| CTCTATTATGCTCTAGATCT+TGG | 0.434188 | tig0012581:+148926 | Msa1352270:CDS |
| GGTGGAGGATGAAAACCTTC+AGG | 0.434285 | tig0012581:-149200 | None:intergenic |
| TTGAAACTTCATCAAACTCT+TGG | 0.434603 | tig0012581:-149009 | None:intergenic |
| ATGTAGGTTAATGATACAAT+TGG | 0.441510 | tig0012581:+150180 | Msa1352270:intron |
| GCTAATGATGGTTCAGGCAT+TGG | 0.443734 | tig0012581:+151759 | Msa1352270:CDS |
| ACTAGGAAGAGACACAGTTA+AGG | 0.444325 | tig0012581:+151599 | Msa1352270:CDS |
| GAGCATGCTAATGATGGTTC+AGG | 0.445261 | tig0012581:+151753 | Msa1352270:CDS |
| CCGAGTTCTCTTTGTCTGCC+AGG | 0.447341 | tig0012581:-149221 | None:intergenic |
| GATACAATTGGAACATTGGC+TGG | 0.447474 | tig0012581:+150192 | Msa1352270:CDS |
| GTGCTCCTTGGTCGGTAACA+GGG | 0.450716 | tig0012581:+151989 | Msa1352270:three_prime_UTR |
| AAGCTTAAACCCTGGAGAAC+AGG | 0.452669 | tig0012581:+150530 | Msa1352270:CDS |
| TTGCTTTCTGGCATGTACTT+GGG | 0.455566 | tig0012581:+150651 | Msa1352270:CDS |
| TGCTTTCTGGCATGTACTTG+GGG | 0.456526 | tig0012581:+150652 | Msa1352270:CDS |
| ACGGAGAGCTTTGTTGAAGA+TGG | 0.457787 | tig0012581:+150683 | Msa1352270:CDS |
| CATGGCCTTATGCCAAAATC+AGG | 0.461136 | tig0012581:+150312 | Msa1352270:CDS |
| TCTCTTTGTCTGCCAGGTGG+AGG | 0.463034 | tig0012581:-149215 | None:intergenic |
| GAAAAGTGTGAGACACCAAT+TGG | 0.463065 | tig0012581:+147967 | Msa1352270:CDS |
| AAGAAAATGACAGTGCAGTT+AGG | 0.464986 | tig0012581:-147653 | None:intergenic |
| TGTAGGTTATAAACATGGAA+TGG | 0.471322 | tig0012581:+150448 | Msa1352270:intron |
| TAGACAGTTGGCTGATGCTA+TGG | 0.474066 | tig0012581:+147996 | Msa1352270:CDS |
| TTACATGCCTTTAATTACCT+TGG | 0.477218 | tig0012581:-151845 | None:intergenic |
| TTGGGAATCCTGAAGAAACT+AGG | 0.478456 | tig0012581:+151582 | Msa1352270:CDS |
| CTGCTGTGATTCTCGGTACT+GGG | 0.480970 | tig0012581:+150244 | Msa1352270:CDS |
| TAGAGTCCCAGATGCAATTG+AGG | 0.487255 | tig0012581:-149273 | None:intergenic |
| GACTCTAATAAAGTGGACTA+AGG | 0.488261 | tig0012581:+149289 | Msa1352270:CDS |
| GGGAGAACTAACCAAGTCCT+TGG | 0.493228 | tig0012581:+149936 | Msa1352270:CDS |
| AACTGTCTAAGCTTTCCAAT+TGG | 0.495017 | tig0012581:-147982 | None:intergenic |
| CGGGCAGACCATGTCTGCTG+TGG | 0.495531 | tig0012581:+151964 | Msa1352270:three_prime_UTR |
| TGGTGTTGTGTCGTGGTGCA+TGG | 0.502741 | tig0012581:-151308 | None:intergenic |
| GTATGATAAGTTCGAGAAAG+TGG | 0.505548 | tig0012581:+147911 | Msa1352270:CDS |
| AGCCGCCGCGGCACAAACGG+CGG | 0.505594 | tig0012581:-147872 | None:intergenic |
| CAATTGAGGTTTGCTTCACA+GGG | 0.506739 | tig0012581:-149259 | None:intergenic |
| TCACATTATTTGCAGGGATG+AGG | 0.508861 | tig0012581:+148898 | Msa1352270:intron |
| ATCCCTCCTCAATTGATGAC+CGG | 0.509765 | tig0012581:+149031 | Msa1352270:CDS |
| GGGCAGACCATGTCTGCTGT+GGG | 0.512585 | tig0012581:+151965 | Msa1352270:three_prime_UTR |
| CGCCGCCGTTTGTGCCGCGG+CGG | 0.515327 | tig0012581:+147870 | Msa1352270:CDS |
| GTCTATAGGACCAATAACTA+AGG | 0.519380 | tig0012581:-151931 | None:intergenic |
| TAATGATACAATTGGAACAT+TGG | 0.520504 | tig0012581:+150188 | Msa1352270:CDS |
| GAGCTGCAACACGCATATCC+AGG | 0.521304 | tig0012581:-149969 | None:intergenic |
| CTAGGAAGAGACACAGTTAA+GGG | 0.522099 | tig0012581:+151600 | Msa1352270:CDS |
| TGGAGGCAGATTCTACAATC+AGG | 0.523047 | tig0012581:+150212 | Msa1352270:CDS |
| CATGCTGGTCTTGCATCTGA+AGG | 0.526173 | tig0012581:+148030 | Msa1352270:CDS |
| TTGTGCCGCGGCGGCTCTTG+TGG | 0.527226 | tig0012581:+147879 | Msa1352270:CDS |
| TTGGATTAAGATTTGAGTGA+TGG | 0.527581 | tig0012581:+147813 | Msa1352270:exon |
| CCCGTTAGTTAAAAGTCTAT+AGG | 0.527743 | tig0012581:-151945 | None:intergenic |
| GTCGTTGAGCATGCTAATGA+TGG | 0.530025 | tig0012581:+151747 | Msa1352270:CDS |
| CAGTGATAGCATTGGATGGA+GGG | 0.537158 | tig0012581:+151640 | Msa1352270:CDS |
| CATTTAGGTGGAAAAGAGAA+AGG | 0.537341 | tig0012581:+148977 | Msa1352270:CDS |
| AGAGGTTGGAAGCAAATTGA+AGG | 0.538515 | tig0012581:+151339 | Msa1352270:CDS |
| GAAGGAACTGCTTGGAGATG+AGG | 0.540931 | tig0012581:+151710 | Msa1352270:CDS |
| TAAGGTCGCGGTGGGAGCTG+CGG | 0.541422 | tig0012581:+147837 | Msa1352270:CDS |
| CATCTGGGACTCTAATAAAG+TGG | 0.541566 | tig0012581:+149282 | Msa1352270:CDS |
| TGCTCCTTGGTCGGTAACAG+GGG | 0.542709 | tig0012581:+151990 | Msa1352270:three_prime_UTR |
| ATGGATGTTGAGATGCATGC+TGG | 0.543124 | tig0012581:+148015 | Msa1352270:CDS |
| AAGTTTAGATCTGATTCTGT+GGG | 0.544444 | tig0012581:-147582 | None:intergenic |
| ACGCGCATGCTATTCCCAAA+TGG | 0.545349 | tig0012581:+150289 | Msa1352270:CDS |
| TAAGATTTGAGTGATGGGTA+AGG | 0.546558 | tig0012581:+147819 | Msa1352270:exon |
| AAAGTTTAGATCTGATTCTG+TGG | 0.547536 | tig0012581:-147583 | None:intergenic |
| GTCCTTCGTGTACATTTAGG+TGG | 0.550016 | tig0012581:+148965 | Msa1352270:CDS |
| GATGCTGAAAGCTTAAACCC+TGG | 0.551347 | tig0012581:+150522 | Msa1352270:CDS |
| TAAATTCAGAGTTTGCTTGG+AGG | 0.552574 | tig0012581:+151680 | Msa1352270:CDS |
| GCAGACCATGTCTGCTGTGG+GGG | 0.553349 | tig0012581:+151967 | Msa1352270:three_prime_UTR |
| GAAGAACCGGTCATCAATTG+AGG | 0.558178 | tig0012581:-149037 | None:intergenic |
| TATTATGCTCTAGATCTTGG+TGG | 0.558418 | tig0012581:+148929 | Msa1352270:CDS |
| CAAATTGAAGGATATATTGG+AGG | 0.558923 | tig0012581:+151351 | Msa1352270:CDS |
| AATTGGAAAGCTTAGACAGT+TGG | 0.560728 | tig0012581:+147984 | Msa1352270:CDS |
| GCAAAAGTCAGTGATAGCAT+TGG | 0.560739 | tig0012581:+151632 | Msa1352270:CDS |
| ACACCAGATCTGAAAGAGGT+TGG | 0.565677 | tig0012581:+151325 | Msa1352270:CDS |
| CCGCGGCGGCTCTTGTGGTG+CGG | 0.566167 | tig0012581:+147884 | Msa1352270:CDS |
| GCTGGTCTTGCATCTGAAGG+TGG | 0.566582 | tig0012581:+148033 | Msa1352270:CDS |
| CACAACACCAGATCTGAAAG+AGG | 0.571670 | tig0012581:+151321 | Msa1352270:CDS |
| TGGATTAAGATTTGAGTGAT+GGG | 0.577136 | tig0012581:+147814 | Msa1352270:exon |
| AGCAAACCTCAATTGCATCT+GGG | 0.578513 | tig0012581:+149267 | Msa1352270:CDS |
| TTTGTTGAGTCAGAACCTGA+AGG | 0.578841 | tig0012581:+149185 | Msa1352270:CDS |
| TTGAGTGATGGGTAAGGTCG+CGG | 0.581116 | tig0012581:+147825 | Msa1352270:exon |
| TGTGACATTGTCGCCAGTCG+CGG | 0.581524 | tig0012581:+151534 | Msa1352270:CDS |
| GAGTCCTAATGTTATTGCCA+AGG | 0.582560 | tig0012581:+151828 | Msa1352270:exon |
| GATACGCTGAAGGAACTGCT+TGG | 0.583463 | tig0012581:+151702 | Msa1352270:CDS |
| ACTCTAATAAAGTGGACTAA+GGG | 0.584848 | tig0012581:+149290 | Msa1352270:CDS |
| CCAAAATACCAGCAGCAGCA+AGG | 0.587377 | tig0012581:-151563 | None:intergenic |
| ATTATTTGCAGGGATGAGGA+AGG | 0.587877 | tig0012581:+148902 | Msa1352270:intron |
| AAATCTTAATCCAACAAAGT+CGG | 0.588607 | tig0012581:-147804 | None:intergenic |
| ACTTTCTCGAACTTATCATA+CGG | 0.588844 | tig0012581:-147909 | None:intergenic |
| CATGCTATTCCCAAATGGCA+TGG | 0.591206 | tig0012581:+150294 | Msa1352270:CDS |
| ATTGATGACCGGTTCTTCAG+AGG | 0.592464 | tig0012581:+149042 | Msa1352270:CDS |
| GTAGGTTGGCGAAGATGTGG+TGG | 0.593075 | tig0012581:+149915 | Msa1352270:intron |
| CCTGGCAGACAAAGAGAACT+CGG | 0.593630 | tig0012581:+149221 | Msa1352270:CDS |
| GAGAAAGTGGACACGTAGCG+TGG | 0.594090 | tig0012581:+147924 | Msa1352270:CDS |
| TTAAAGGAAGATGTGATGAT+CGG | 0.599131 | tig0012581:-150479 | None:intergenic |
| GGCAGACCATGTCTGCTGTG+GGG | 0.600343 | tig0012581:+151966 | Msa1352270:three_prime_UTR |
| GGTGCCCCTGTTACCGACCA+AGG | 0.600973 | tig0012581:-151994 | None:intergenic |
| AAGTCAGTGATAGCATTGGA+TGG | 0.608938 | tig0012581:+151636 | Msa1352270:CDS |
| TCATAATTACCTGTTCTCCA+GGG | 0.609665 | tig0012581:-150539 | None:intergenic |
| TTGCTTGGAGGATACGCTGA+AGG | 0.610887 | tig0012581:+151692 | Msa1352270:CDS |
| TCAGTGATAGCATTGGATGG+AGG | 0.611893 | tig0012581:+151639 | Msa1352270:CDS |
| GAACCGGTCATCAATTGAGG+AGG | 0.615013 | tig0012581:-149034 | None:intergenic |
| TCAGATCTGGTGTTGTGTCG+TGG | 0.616704 | tig0012581:-151315 | None:intergenic |
| TGAATGAGAGAAACAAAGTG+AGG | 0.616996 | tig0012581:-147765 | None:intergenic |
| AGTGATGGGTAAGGTCGCGG+TGG | 0.620275 | tig0012581:+147828 | Msa1352270:exon |
| CTTGTAGGTTGGCGAAGATG+TGG | 0.620866 | tig0012581:+149912 | Msa1352270:intron |
| TTTGTTGAAGATGGCCGAAG+AGG | 0.622326 | tig0012581:+150692 | Msa1352270:CDS |
| AGTTCTCTTTGTCTGCCAGG+TGG | 0.622694 | tig0012581:-149218 | None:intergenic |
| TGGTGCATGGAAGACATGTC+AGG | 0.624431 | tig0012581:-151295 | None:intergenic |
| GCTTTCTGGCATGTACTTGG+GGG | 0.629925 | tig0012581:+150653 | Msa1352270:CDS |
| GTGATGGGTAAGGTCGCGGT+GGG | 0.648560 | tig0012581:+147829 | Msa1352270:exon |
| CCGCACCACAAGAGCCGCCG+CGG | 0.648816 | tig0012581:-147884 | None:intergenic |
| CTAAATGTACACGAAGGACA+CGG | 0.650048 | tig0012581:-148961 | None:intergenic |
| ATGTTGATAATCTTCCTACT+GGG | 0.651766 | tig0012581:+148082 | Msa1352270:CDS |
| GGAAGAGACACAGTTAAGGG+TGG | 0.653081 | tig0012581:+151603 | Msa1352270:CDS |
| AATACTGTAGGTTATAAACA+TGG | 0.656730 | tig0012581:+150443 | Msa1352270:intron |
| AACCGGTCATCAATTGAGGA+GGG | 0.663823 | tig0012581:-149033 | None:intergenic |
| ATTAGCATGCTCAACGACAA+CGG | 0.666183 | tig0012581:-151742 | None:intergenic |
| TAGGTTGGCGAAGATGTGGT+GGG | 0.672008 | tig0012581:+149916 | Msa1352270:intron |
| TAGTGACTGACTGACCCAGT+AGG | 0.676585 | tig0012581:-148096 | None:intergenic |
| TAGGTTATAAACATGGAATG+GGG | 0.681790 | tig0012581:+150450 | Msa1352270:intron |
| ACAATTGGAACATTGGCTGG+AGG | 0.694331 | tig0012581:+150195 | Msa1352270:CDS |
| TTCCACCTAAATGTACACGA+AGG | 0.716522 | tig0012581:-148967 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTTTTTATTTGACTTT+TGG | + | tig0012581:148401-148420 | Msa1352270:intron | 10.0% |
| !! | ATAAAAATTGTAAAAGAAAT+AGG | - | tig0012581:149625-149644 | None:intergenic | 10.0% |
| !!! | AAACTTTTGATTTAAAAAAA+GGG | - | tig0012581:152263-152282 | None:intergenic | 10.0% |
| !!! | TTTTGACATATTTGAATATT+TGG | + | tig0012581:148458-148477 | Msa1352270:intron | 15.0% |
| !!! | TGATTTTAAATGAATTGATT+CGG | - | tig0012581:148622-148641 | None:intergenic | 15.0% |
| !! | TAGGAAAATAAAAACAAAAA+AGG | - | tig0012581:151040-151059 | None:intergenic | 15.0% |
| !!! | GTTTTAACATCTTTTATATT+AGG | + | tig0012581:151269-151288 | Msa1352270:intron | 15.0% |
| !! | ATTTATTTATAGTTGAAAAC+AGG | - | tig0012581:152119-152138 | None:intergenic | 15.0% |
| !!! | TTTTCAACTATAAATAAATC+AGG | + | tig0012581:152120-152139 | Msa1352270:three_prime_UTR | 15.0% |
| !!! | GAAACTTTTGATTTAAAAAA+AGG | - | tig0012581:152264-152283 | None:intergenic | 15.0% |
| !!! | TTATTCTTATTTTTTGTGCA+TGG | - | tig0012581:147681-147700 | None:intergenic | 20.0% |
| !! | TACATCATGTATAAATAAGT+GGG | - | tig0012581:148552-148571 | None:intergenic | 20.0% |
| !! | ATACATCATGTATAAATAAG+TGG | - | tig0012581:148553-148572 | None:intergenic | 20.0% |
| !! | AGGAATTTACATGATTATAA+TGG | + | tig0012581:148697-148716 | Msa1352270:intron | 20.0% |
| !! | GGAATTTACATGATTATAAT+GGG | + | tig0012581:148698-148717 | Msa1352270:intron | 20.0% |
| !! | AATGTGAAAAATTACTCAAA+GGG | - | tig0012581:148877-148896 | None:intergenic | 20.0% |
| !! | AGTCAATGTAAAAAGAATTA+CGG | - | tig0012581:149333-149352 | None:intergenic | 20.0% |
| !!! | TAATGTTTTTAGAAGTAAAC+AGG | + | tig0012581:149821-149840 | Msa1352270:intron | 20.0% |
| !!! | TTTTTAGTTTTAGCAATTCT+TGG | + | tig0012581:150112-150131 | Msa1352270:intron | 20.0% |
| !!! | AACAAGTTAGTTTTATTTAG+AGG | - | tig0012581:150154-150173 | None:intergenic | 20.0% |
| !! | TACAGTATTTAGAAGTAATT+TGG | - | tig0012581:150432-150451 | None:intergenic | 20.0% |
| !! | AAATTACTTCTAAATACTGT+AGG | + | tig0012581:150431-150450 | Msa1352270:intron | 20.0% |
| !!! | TAAAAGGAATTTTCAACTTA+GGG | - | tig0012581:150743-150762 | None:intergenic | 20.0% |
| !!! | ATAAAAGGAATTTTCAACTT+AGG | - | tig0012581:150744-150763 | None:intergenic | 20.0% |
| !!! | TGAAAATTCCTTTTATACTT+AGG | + | tig0012581:150748-150767 | Msa1352270:CDS | 20.0% |
| !! | ATGCTAATGATTCAAAAAAT+AGG | - | tig0012581:151059-151078 | None:intergenic | 20.0% |
| !! | CAAAACAAAAAATATCAAAC+TGG | - | tig0012581:151873-151892 | None:intergenic | 20.0% |
| !! | AAAAAAGGGAAAAATATAAG+AGG | - | tig0012581:152249-152268 | None:intergenic | 20.0% |
| !!! | TGAATTCAATCAAATTGTTT+TGG | + | tig0012581:152340-152359 | Msa1352270:three_prime_UTR | 20.0% |
| ! | AAATCTTAATCCAACAAAGT+CGG | - | tig0012581:147807-147826 | None:intergenic | 25.0% |
| !! | AAAGAAAAGTTGTTGATTAG+AGG | + | tig0012581:148360-148379 | Msa1352270:intron | 25.0% |
| !!! | TTTTATTTGACTTTTGGACA+TGG | + | tig0012581:148407-148426 | Msa1352270:intron | 25.0% |
| ! | ATTCATTTCTGATGAAAAGT+GGG | - | tig0012581:148592-148611 | None:intergenic | 25.0% |
| ! | AATTCATTTCTGATGAAAAG+TGG | - | tig0012581:148593-148612 | None:intergenic | 25.0% |
| !! | ATTTACATGATTATAATGGG+AGG | + | tig0012581:148701-148720 | Msa1352270:intron | 25.0% |
| ! | AACACAAAATCAAATGCTTT+GGG | - | tig0012581:148811-148830 | None:intergenic | 25.0% |
| ! | CAATGTGAAAAATTACTCAA+AGG | - | tig0012581:148878-148897 | None:intergenic | 25.0% |
| !!! | TTGATTTTGTTGTTTGTTAC+AGG | + | tig0012581:149127-149146 | Msa1352270:intron | 25.0% |
| !!! | TGATTTTGTTGTTTGTTACA+GGG | + | tig0012581:149128-149147 | Msa1352270:intron | 25.0% |
| ! | TAAATAACAACACGAAACAA+TGG | - | tig0012581:149383-149402 | None:intergenic | 25.0% |
| !! | TACAATTTTGAACCATTATG+AGG | - | tig0012581:149526-149545 | None:intergenic | 25.0% |
| ! | AGAAATAGGAAGAGAAATAT+TGG | - | tig0012581:149611-149630 | None:intergenic | 25.0% |
| !! | TTCTGAAAACAGAGAAAAAT+GGG | - | tig0012581:149847-149866 | None:intergenic | 25.0% |
| !! | TTTCTGAAAACAGAGAAAAA+TGG | - | tig0012581:149848-149867 | None:intergenic | 25.0% |
| ! | AAATACAGAAATCCTAAAAG+AGG | - | tig0012581:150011-150030 | None:intergenic | 25.0% |
| ! | ATGTAGGTTAATGATACAAT+TGG | + | tig0012581:150180-150199 | Msa1352270:intron | 25.0% |
| ! | TAATGATACAATTGGAACAT+TGG | + | tig0012581:150188-150207 | Msa1352270:CDS | 25.0% |
| ! | AATACTGTAGGTTATAAACA+TGG | + | tig0012581:150443-150462 | Msa1352270:intron | 25.0% |
| ! | ATCAAGATCTTGATCATATT+CGG | - | tig0012581:150505-150524 | None:intergenic | 25.0% |
| !!! | ATTTTTGAGAAATTGCTTTC+TGG | + | tig0012581:150639-150658 | Msa1352270:CDS | 25.0% |
| !! | AAAAGGAATTTTCAACTTAG+GGG | - | tig0012581:150742-150761 | None:intergenic | 25.0% |
| ! | AAAAGGAATCATTATTGACA+TGG | - | tig0012581:150786-150805 | None:intergenic | 25.0% |
| ! | ATTCATGCAATTAATAACCA+AGG | - | tig0012581:150817-150836 | None:intergenic | 25.0% |
| !! | CTTTTACCTAGAATCAATAA+GGG | - | tig0012581:150934-150953 | None:intergenic | 25.0% |
| ! | AAGCAAATTGAAGGATATAT+TGG | + | tig0012581:151348-151367 | Msa1352270:CDS | 25.0% |
| ! | ATGAAAGTTGTATTTCAACA+TGG | - | tig0012581:151394-151413 | None:intergenic | 25.0% |
| ! | GTATTAGATATCTGACAAAA+AGG | - | tig0012581:151480-151499 | None:intergenic | 25.0% |
| !!! | TCCTATAGACTTTTAACTAA+CGG | + | tig0012581:151944-151963 | Msa1352270:three_prime_UTR | 25.0% |
| AAGTTTAGATCTGATTCTGT+GGG | - | tig0012581:147585-147604 | None:intergenic | 30.0% | |
| AAAGTTTAGATCTGATTCTG+TGG | - | tig0012581:147586-147605 | None:intergenic | 30.0% | |
| AATAAAGTTTCCGACTTTGT+TGG | + | tig0012581:147794-147813 | Msa1352270:five_prime_UTR | 30.0% | |
| TTGGATTAAGATTTGAGTGA+TGG | + | tig0012581:147813-147832 | Msa1352270:exon | 30.0% | |
| TGGATTAAGATTTGAGTGAT+GGG | + | tig0012581:147814-147833 | Msa1352270:exon | 30.0% | |
| ACTTTCTCGAACTTATCATA+CGG | - | tig0012581:147912-147931 | None:intergenic | 30.0% | |
| !! | TATGTTGATAATCTTCCTAC+TGG | + | tig0012581:148081-148100 | Msa1352270:CDS | 30.0% |
| !! | ATGTTGATAATCTTCCTACT+GGG | + | tig0012581:148082-148101 | Msa1352270:CDS | 30.0% |
| ! | TTTTAGTCATTAAGCAGCAT+AGG | - | tig0012581:148213-148232 | None:intergenic | 30.0% |
| TACAATCACAAATCATGGAT+TGG | - | tig0012581:148313-148332 | None:intergenic | 30.0% | |
| TTTGTGATTGTATCTGGTAT+TGG | + | tig0012581:148321-148340 | Msa1352270:intron | 30.0% | |
| CAACACAAAATCAAATGCTT+TGG | - | tig0012581:148812-148831 | None:intergenic | 30.0% | |
| ! | GATTTTGTGTTGTGAAAGTT+TGG | + | tig0012581:148820-148839 | Msa1352270:intron | 30.0% |
| ACATTGTCACATTATTTGCA+GGG | + | tig0012581:148892-148911 | Msa1352270:intron | 30.0% | |
| TTGAAACTTCATCAAACTCT+TGG | - | tig0012581:149012-149031 | None:intergenic | 30.0% | |
| !! | ACTCTAATAAAGTGGACTAA+GGG | + | tig0012581:149290-149309 | Msa1352270:CDS | 30.0% |
| ACACAACAACAAAAAGAGAA+AGG | - | tig0012581:149470-149489 | None:intergenic | 30.0% | |
| TCATAGTGTTTACCTCATAA+TGG | + | tig0012581:149511-149530 | Msa1352270:intron | 30.0% | |
| ! | AGACAATGAAAACAGTGTTT+TGG | - | tig0012581:149684-149703 | None:intergenic | 30.0% |
| TCAGAAATTCTCTCATTGAA+TGG | + | tig0012581:149861-149880 | Msa1352270:intron | 30.0% | |
| AATTTGTCTCTGACTGAATT+TGG | + | tig0012581:150063-150082 | Msa1352270:intron | 30.0% | |
| !! | TTTGGAGTTACAAGGTTTTA+TGG | + | tig0012581:150081-150100 | Msa1352270:intron | 30.0% |
| !! | CTAACTTGTTGATGTTATGT+AGG | + | tig0012581:150164-150183 | Msa1352270:intron | 30.0% |
| TGGTAAGGTTATGAGTAATT+AGG | + | tig0012581:150340-150359 | Msa1352270:intron | 30.0% | |
| ATTTAGAAGTAATTTGGCAC+CGG | - | tig0012581:150426-150445 | None:intergenic | 30.0% | |
| TGTAGGTTATAAACATGGAA+TGG | + | tig0012581:150448-150467 | Msa1352270:intron | 30.0% | |
| GTAGGTTATAAACATGGAAT+GGG | + | tig0012581:150449-150468 | Msa1352270:intron | 30.0% | |
| TAGGTTATAAACATGGAATG+GGG | + | tig0012581:150450-150469 | Msa1352270:intron | 30.0% | |
| TTAAAGGAAGATGTGATGAT+CGG | - | tig0012581:150482-150501 | None:intergenic | 30.0% | |
| TCTTGATCATATTCGGTTAA+AGG | - | tig0012581:150498-150517 | None:intergenic | 30.0% | |
| ! | AAAGGAATTTTCAACTTAGG+GGG | - | tig0012581:150741-150760 | None:intergenic | 30.0% |
| TCATTATTGACATGGTTTAG+TGG | - | tig0012581:150778-150797 | None:intergenic | 30.0% | |
| ! | ATTCCTTTTATACTTAGCCT+TGG | + | tig0012581:150797-150816 | Msa1352270:intron | 30.0% |
| TAACCAAGGCTAAGTATAAA+AGG | - | tig0012581:150803-150822 | None:intergenic | 30.0% | |
| CAATAAGGGTGAAAATAAGA+GGG | - | tig0012581:150920-150939 | None:intergenic | 30.0% | |
| TCAATAAGGGTGAAAATAAG+AGG | - | tig0012581:150921-150940 | None:intergenic | 30.0% | |
| !!! | TTTTCACCCTTATTGATTCT+AGG | + | tig0012581:150925-150944 | Msa1352270:intron | 30.0% |
| ! | GCTTTTACCTAGAATCAATA+AGG | - | tig0012581:150935-150954 | None:intergenic | 30.0% |
| ! | ATTGATTCTAGGTAAAAGCT+TGG | + | tig0012581:150936-150955 | Msa1352270:intron | 30.0% |
| AAAGCTTGGATGAATGAAAA+TGG | + | tig0012581:150950-150969 | Msa1352270:intron | 30.0% | |
| ! | CAAAAAAGGTATGTTACTAC+TGG | - | tig0012581:151026-151045 | None:intergenic | 30.0% |
| ! | TTTTATCCTAACGCAAAAGT+AGG | + | tig0012581:151084-151103 | Msa1352270:intron | 30.0% |
| AAGATTTATGTAACTCAGCA+GGG | - | tig0012581:151208-151227 | None:intergenic | 30.0% | |
| CAAATTGAAGGATATATTGG+AGG | + | tig0012581:151351-151370 | Msa1352270:CDS | 30.0% | |
| ACTATATAGGATGATATGTG+AGG | - | tig0012581:151418-151437 | None:intergenic | 30.0% | |
| CTTATCCATTTGAGAGAAAA+TGG | - | tig0012581:151442-151461 | None:intergenic | 30.0% | |
| CTAATACATCACTAAAAACG+AGG | + | tig0012581:151493-151512 | Msa1352270:CDS | 30.0% | |
| ATTACCTTGGCAATAACATT+AGG | - | tig0012581:151835-151854 | None:intergenic | 30.0% | |
| GTTATTGCCAAGGTAATTAA+AGG | + | tig0012581:151838-151857 | Msa1352270:three_prime_UTR | 30.0% | |
| TTACATGCCTTTAATTACCT+TGG | - | tig0012581:151848-151867 | None:intergenic | 30.0% | |
| !! | CCTATAGACTTTTAACTAAC+GGG | + | tig0012581:151945-151964 | Msa1352270:three_prime_UTR | 30.0% |
| AACCCTGCAATCAAAATAAT+GGG | - | tig0012581:152018-152037 | None:intergenic | 30.0% | |
| AAACCCTGCAATCAAAATAA+TGG | - | tig0012581:152019-152038 | None:intergenic | 30.0% | |
| !! | GGTTTGCTTCTTCTATTTTA+TGG | + | tig0012581:152034-152053 | Msa1352270:three_prime_UTR | 30.0% |
| AAATGCTGTGAATCAAAAAC+GGG | - | tig0012581:152162-152181 | None:intergenic | 30.0% | |
| GAAATGCTGTGAATCAAAAA+CGG | - | tig0012581:152163-152182 | None:intergenic | 30.0% | |
| ! | TCTACTATTGTTGTTAGTAC+TGG | + | tig0012581:152211-152230 | Msa1352270:three_prime_UTR | 30.0% |
| AAGGGAAAAATATAAGAGGA+TGG | - | tig0012581:152245-152264 | None:intergenic | 30.0% | |
| !! | TGCGCGTGTTTTAAATATAA+AGG | - | tig0012581:152286-152305 | None:intergenic | 30.0% |
| !!! | GTTTTGGAGAAATGAATGAA+TGG | + | tig0012581:152356-152375 | Msa1352270:three_prime_UTR | 30.0% |
| AAGAAAATGACAGTGCAGTT+AGG | - | tig0012581:147656-147675 | None:intergenic | 35.0% | |
| TGAATGAGAGAAACAAAGTG+AGG | - | tig0012581:147768-147787 | None:intergenic | 35.0% | |
| !! | TAAGATTTGAGTGATGGGTA+AGG | + | tig0012581:147819-147838 | Msa1352270:exon | 35.0% |
| GTATGATAAGTTCGAGAAAG+TGG | + | tig0012581:147911-147930 | Msa1352270:CDS | 35.0% | |
| !! | TGGCTATTTTGAAGGAGTTT+GGG | + | tig0012581:147944-147963 | Msa1352270:CDS | 35.0% |
| AACTGTCTAAGCTTTCCAAT+TGG | - | tig0012581:147985-148004 | None:intergenic | 35.0% | |
| AATTGGAAAGCTTAGACAGT+TGG | + | tig0012581:147984-148003 | Msa1352270:CDS | 35.0% | |
| CCAGATACAATCACAAATCA+TGG | - | tig0012581:148318-148337 | None:intergenic | 35.0% | |
| ! | CCATGATTTGTGATTGTATC+TGG | + | tig0012581:148315-148334 | Msa1352270:intron | 35.0% |
| GAGGCTAAAAACAATTGTAG+AGG | - | tig0012581:148514-148533 | None:intergenic | 35.0% | |
| ! | TGGGTTGAACAGTAAATTTG+AGG | - | tig0012581:148533-148552 | None:intergenic | 35.0% |
| ATTCGAATGTTGTAGCACTT+AGG | + | tig0012581:148677-148696 | Msa1352270:intron | 35.0% | |
| !! | GAGATCACATGTTTTGTTAC+TGG | - | tig0012581:148741-148760 | None:intergenic | 35.0% |
| GATGATTCAGTCACATTGAA+TGG | + | tig0012581:148773-148792 | Msa1352270:intron | 35.0% | |
| CACATTGTCACATTATTTGC+AGG | + | tig0012581:148891-148910 | Msa1352270:intron | 35.0% | |
| ! | CTCTATTATGCTCTAGATCT+TGG | + | tig0012581:148926-148945 | Msa1352270:CDS | 35.0% |
| ! | TATTATGCTCTAGATCTTGG+TGG | + | tig0012581:148929-148948 | Msa1352270:CDS | 35.0% |
| CATTTAGGTGGAAAAGAGAA+AGG | + | tig0012581:148977-148996 | Msa1352270:CDS | 35.0% | |
| !! | GACTCTAATAAAGTGGACTA+AGG | + | tig0012581:149289-149308 | Msa1352270:CDS | 35.0% |
| GAGAGACTCATTTAAGTATC+TGG | - | tig0012581:149427-149446 | None:intergenic | 35.0% | |
| GAGGTAAACACTATGATATC+TGG | - | tig0012581:149507-149526 | None:intergenic | 35.0% | |
| GAGTCTTTCATCTCATTGTT+AGG | + | tig0012581:149759-149778 | Msa1352270:intron | 35.0% | |
| ACCAAGTCCTTGGAAAAAAT+TGG | + | tig0012581:149946-149965 | Msa1352270:CDS | 35.0% | |
| ! | TGACTGAATTTGGAGTTACA+AGG | + | tig0012581:150073-150092 | Msa1352270:intron | 35.0% |
| !! | TATCTCCTGATTTTGGCATA+AGG | - | tig0012581:150320-150339 | None:intergenic | 35.0% |
| TATGCCAAAATCAGGAGATA+TGG | + | tig0012581:150320-150339 | Msa1352270:CDS | 35.0% | |
| ! | CTTACCATATCTCCTGATTT+TGG | - | tig0012581:150327-150346 | None:intergenic | 35.0% |
| CAAAATCAGGAGATATGGTA+AGG | + | tig0012581:150325-150344 | Msa1352270:intron | 35.0% | |
| TTTAGAAGTAATTTGGCACC+GGG | - | tig0012581:150425-150444 | None:intergenic | 35.0% | |
| TCATAATTACCTGTTCTCCA+GGG | - | tig0012581:150542-150561 | None:intergenic | 35.0% | |
| ATCATAATTACCTGTTCTCC+AGG | - | tig0012581:150543-150562 | None:intergenic | 35.0% | |
| AAGGATGCTACAAATTCACA+TGG | - | tig0012581:150596-150615 | None:intergenic | 35.0% | |
| TCTCAAAAATCTGTGAACGA+TGG | - | tig0012581:150629-150648 | None:intergenic | 35.0% | |
| GTGGCATACCTAAGTATAAA+AGG | - | tig0012581:150759-150778 | None:intergenic | 35.0% | |
| !! | GATCATTTTAGTATCAGCCT+TGG | + | tig0012581:150892-150911 | Msa1352270:intron | 35.0% |
| AATAAGGAGTTCTGCTTGTA+TGG | - | tig0012581:151154-151173 | None:intergenic | 35.0% | |
| AGGGTGAAGGAATGAAAATA+AGG | - | tig0012581:151170-151189 | None:intergenic | 35.0% | |
| AGGGTAAAACAGGTGATAAA+GGG | - | tig0012581:151189-151208 | None:intergenic | 35.0% | |
| GAAGATTTATGTAACTCAGC+AGG | - | tig0012581:151209-151228 | None:intergenic | 35.0% | |
| GAGAGAAAATGGCACTATAT+AGG | - | tig0012581:151431-151450 | None:intergenic | 35.0% | |
| !!! | TAGTGCCATTTTCTCTCAAA+TGG | + | tig0012581:151434-151453 | Msa1352270:intron | 35.0% |
| AAAAACGAGGAAGATTGTTG+TGG | + | tig0012581:151506-151525 | Msa1352270:CDS | 35.0% | |
| ! | CACTAAATTCAGAGTTTGCT+TGG | + | tig0012581:151677-151696 | Msa1352270:CDS | 35.0% |
| ! | TAAATTCAGAGTTTGCTTGG+AGG | + | tig0012581:151680-151699 | Msa1352270:CDS | 35.0% |
| AGCTACTATGCCTTAGTTAT+TGG | + | tig0012581:151921-151940 | Msa1352270:three_prime_UTR | 35.0% | |
| GTCTATAGGACCAATAACTA+AGG | - | tig0012581:151934-151953 | None:intergenic | 35.0% | |
| CCCGTTAGTTAAAAGTCTAT+AGG | - | tig0012581:151948-151967 | None:intergenic | 35.0% | |
| !!! | CACCCATTATTTTGATTGCA+GGG | + | tig0012581:152013-152032 | Msa1352270:three_prime_UTR | 35.0% |
| ! | TTTGAGTGTATCCTGTTTTG+CGG | + | tig0012581:152086-152105 | Msa1352270:three_prime_UTR | 35.0% |
| AGATCTGATTCTGTGGGATT+GGG | - | tig0012581:147579-147598 | None:intergenic | 40.0% | |
| TAGATCTGATTCTGTGGGAT+TGG | - | tig0012581:147580-147599 | None:intergenic | 40.0% | |
| !! | GTGGCTATTTTGAAGGAGTT+TGG | + | tig0012581:147943-147962 | Msa1352270:CDS | 40.0% |
| !! | GGCTATTTTGAAGGAGTTTG+GGG | + | tig0012581:147945-147964 | Msa1352270:CDS | 40.0% |
| ! | GAAAAGTGTGAGACACCAAT+TGG | + | tig0012581:147967-147986 | Msa1352270:CDS | 40.0% |
| !! | AAGTGGGTTGAACGTATGTT+TGG | - | tig0012581:148576-148595 | None:intergenic | 40.0% |
| GTGACTGAATCATCAACAAG+TGG | - | tig0012581:148767-148786 | None:intergenic | 40.0% | |
| TCACATTATTTGCAGGGATG+AGG | + | tig0012581:148898-148917 | Msa1352270:intron | 40.0% | |
| ATTATTTGCAGGGATGAGGA+AGG | + | tig0012581:148902-148921 | Msa1352270:intron | 40.0% | |
| CTAAATGTACACGAAGGACA+CGG | - | tig0012581:148964-148983 | None:intergenic | 40.0% | |
| TTCCACCTAAATGTACACGA+AGG | - | tig0012581:148970-148989 | None:intergenic | 40.0% | |
| TTCAGAGGTAAGCGTGTTAT+GGG | + | tig0012581:149057-149076 | Msa1352270:intron | 40.0% | |
| TTTGTTGAGTCAGAACCTGA+AGG | + | tig0012581:149185-149204 | Msa1352270:CDS | 40.0% | |
| ! | CAATTGAGGTTTGCTTCACA+GGG | - | tig0012581:149262-149281 | None:intergenic | 40.0% |
| AAGCAAACCTCAATTGCATC+TGG | + | tig0012581:149266-149285 | Msa1352270:CDS | 40.0% | |
| AGCAAACCTCAATTGCATCT+GGG | + | tig0012581:149267-149286 | Msa1352270:CDS | 40.0% | |
| ! | CATCTGGGACTCTAATAAAG+TGG | + | tig0012581:149282-149301 | Msa1352270:CDS | 40.0% |
| TTGAATGGTCATCTGACAGT+TGG | + | tig0012581:149876-149895 | Msa1352270:intron | 40.0% | |
| TCTATCACTTGCTTGTAGGT+TGG | + | tig0012581:149901-149920 | Msa1352270:intron | 40.0% | |
| !!! | GCCAATTTTTTCCAAGGACT+TGG | - | tig0012581:149950-149969 | None:intergenic | 40.0% |
| !!! | ATCCAGGCCAATTTTTTCCA+AGG | - | tig0012581:149956-149975 | None:intergenic | 40.0% |
| ! | CAGTCTCATTCTCCTCTTTT+AGG | + | tig0012581:149996-150015 | Msa1352270:intron | 40.0% |
| GATACAATTGGAACATTGGC+TGG | + | tig0012581:150192-150211 | Msa1352270:CDS | 40.0% | |
| TGTCTTACGATGCTACTAAG+AGG | + | tig0012581:150385-150404 | Msa1352270:intron | 40.0% | |
| CAAAAATCTGTGAACGATGG+TGG | - | tig0012581:150626-150645 | None:intergenic | 40.0% | |
| ! | ATTGCTTTCTGGCATGTACT+TGG | + | tig0012581:150650-150669 | Msa1352270:CDS | 40.0% |
| ! | TTGCTTTCTGGCATGTACTT+GGG | + | tig0012581:150651-150670 | Msa1352270:CDS | 40.0% |
| TGTACTTGGGGGAAATTGTA+CGG | + | tig0012581:150664-150683 | Msa1352270:CDS | 40.0% | |
| TCCGAAAAATTCAGCCTCTT+CGG | - | tig0012581:150709-150728 | None:intergenic | 40.0% | |
| TCTGTTCAGACTTCTTCATG+TGG | + | tig0012581:150870-150889 | Msa1352270:intron | 40.0% | |
| GTGAAAATAAGAGGGAACCA+AGG | - | tig0012581:150912-150931 | None:intergenic | 40.0% | |
| !! | TCTATGCCTACTTTTGCGTT+AGG | - | tig0012581:151093-151112 | None:intergenic | 40.0% |
| AAACAGGTGATAAAGGGTGA+AGG | - | tig0012581:151183-151202 | None:intergenic | 40.0% | |
| CAGGGTAAAACAGGTGATAA+AGG | - | tig0012581:151190-151209 | None:intergenic | 40.0% | |
| AGAGGTTGGAAGCAAATTGA+AGG | + | tig0012581:151339-151358 | Msa1352270:CDS | 40.0% | |
| TTGGGAATCCTGAAGAAACT+AGG | + | tig0012581:151582-151601 | Msa1352270:CDS | 40.0% | |
| TGTCTCTTCCTAGTTTCTTC+AGG | - | tig0012581:151593-151612 | None:intergenic | 40.0% | |
| ACTAGGAAGAGACACAGTTA+AGG | + | tig0012581:151599-151618 | Msa1352270:CDS | 40.0% | |
| CTAGGAAGAGACACAGTTAA+GGG | + | tig0012581:151600-151619 | Msa1352270:CDS | 40.0% | |
| GCAAAAGTCAGTGATAGCAT+TGG | + | tig0012581:151632-151651 | Msa1352270:CDS | 40.0% | |
| ! | AAGTCAGTGATAGCATTGGA+TGG | + | tig0012581:151636-151655 | Msa1352270:CDS | 40.0% |
| ATTAGCATGCTCAACGACAA+CGG | - | tig0012581:151745-151764 | None:intergenic | 40.0% | |
| AGCTTCTCACTCTCAGTATT+TGG | + | tig0012581:151797-151816 | Msa1352270:CDS | 40.0% | |
| GCTTCTCACTCTCAGTATTT+GGG | + | tig0012581:151798-151817 | Msa1352270:CDS | 40.0% | |
| GAGTCCTAATGTTATTGCCA+AGG | + | tig0012581:151828-151847 | Msa1352270:exon | 40.0% | |
| !!! | GCACCCATTATTTTGATTGC+AGG | + | tig0012581:152012-152031 | Msa1352270:three_prime_UTR | 40.0% |
| TGACAGTGCAGTTAGGAGTT+AGG | - | tig0012581:147649-147668 | None:intergenic | 45.0% | |
| !! | ACGTAGCGTGGCTATTTTGA+AGG | + | tig0012581:147936-147955 | Msa1352270:CDS | 45.0% |
| TAGACAGTTGGCTGATGCTA+TGG | + | tig0012581:147996-148015 | Msa1352270:CDS | 45.0% | |
| ATGGATGTTGAGATGCATGC+TGG | + | tig0012581:148015-148034 | Msa1352270:CDS | 45.0% | |
| CGTGTCCTTCGTGTACATTT+AGG | + | tig0012581:148962-148981 | Msa1352270:CDS | 45.0% | |
| GTCCTTCGTGTACATTTAGG+TGG | + | tig0012581:148965-148984 | Msa1352270:CDS | 45.0% | |
| ! | ATCCCTCCTCAATTGATGAC+CGG | + | tig0012581:149031-149050 | Msa1352270:CDS | 45.0% |
| AACCGGTCATCAATTGAGGA+GGG | - | tig0012581:149036-149055 | None:intergenic | 45.0% | |
| GAAGAACCGGTCATCAATTG+AGG | - | tig0012581:149040-149059 | None:intergenic | 45.0% | |
| ! | ATTGATGACCGGTTCTTCAG+AGG | + | tig0012581:149042-149061 | Msa1352270:CDS | 45.0% |
| CTTCAGAGGTAAGCGTGTTA+TGG | + | tig0012581:149056-149075 | Msa1352270:intron | 45.0% | |
| ! | GCAATTGAGGTTTGCTTCAC+AGG | - | tig0012581:149263-149282 | None:intergenic | 45.0% |
| TAGAGTCCCAGATGCAATTG+AGG | - | tig0012581:149276-149295 | None:intergenic | 45.0% | |
| GGTCTCTATCACTTGCTTGT+AGG | + | tig0012581:149897-149916 | Msa1352270:intron | 45.0% | |
| GTCCTTGGAAAAAATTGGCC+TGG | + | tig0012581:149951-149970 | Msa1352270:CDS | 45.0% | |
| ! | ACAATTGGAACATTGGCTGG+AGG | + | tig0012581:150195-150214 | Msa1352270:CDS | 45.0% |
| TGGAGGCAGATTCTACAATC+AGG | + | tig0012581:150212-150231 | Msa1352270:CDS | 45.0% | |
| GTCATTGCTGCTGTGATTCT+CGG | + | tig0012581:150237-150256 | Msa1352270:CDS | 45.0% | |
| CATGCTATTCCCAAATGGCA+TGG | + | tig0012581:150294-150313 | Msa1352270:CDS | 45.0% | |
| !! | CATGGCCTTATGCCAAAATC+AGG | + | tig0012581:150312-150331 | Msa1352270:CDS | 45.0% |
| TTACGATGCTACTAAGAGGC+AGG | + | tig0012581:150389-150408 | Msa1352270:intron | 45.0% | |
| GATGCTGAAAGCTTAAACCC+TGG | + | tig0012581:150522-150541 | Msa1352270:CDS | 45.0% | |
| AAGCTTAAACCCTGGAGAAC+AGG | + | tig0012581:150530-150549 | Msa1352270:CDS | 45.0% | |
| !! | AATCTGTGAACGATGGTGGA+AGG | - | tig0012581:150622-150641 | None:intergenic | 45.0% |
| ! | TGCTTTCTGGCATGTACTTG+GGG | + | tig0012581:150652-150671 | Msa1352270:CDS | 45.0% |
| !! | ACGGAGAGCTTTGTTGAAGA+TGG | + | tig0012581:150683-150702 | Msa1352270:CDS | 45.0% |
| TTTGTTGAAGATGGCCGAAG+AGG | + | tig0012581:150692-150711 | Msa1352270:CDS | 45.0% | |
| ! | GCCGAAGAGGCTGAATTTTT+CGG | + | tig0012581:150705-150724 | Msa1352270:CDS | 45.0% |
| GTAACTCAGCAGGGTAAAAC+AGG | - | tig0012581:151199-151218 | None:intergenic | 45.0% | |
| CACAACACCAGATCTGAAAG+AGG | + | tig0012581:151321-151340 | Msa1352270:CDS | 45.0% | |
| ACACCAGATCTGAAAGAGGT+TGG | + | tig0012581:151325-151344 | Msa1352270:CDS | 45.0% | |
| CTTCCAACCTCTTTCAGATC+TGG | - | tig0012581:151331-151350 | None:intergenic | 45.0% | |
| ! | CTTGCTGCTGCTGGTATTTT+GGG | + | tig0012581:151564-151583 | Msa1352270:CDS | 45.0% |
| ! | TCAGTGATAGCATTGGATGG+AGG | + | tig0012581:151639-151658 | Msa1352270:CDS | 45.0% |
| ! | CAGTGATAGCATTGGATGGA+GGG | + | tig0012581:151640-151659 | Msa1352270:CDS | 45.0% |
| GTCGTTGAGCATGCTAATGA+TGG | + | tig0012581:151747-151766 | Msa1352270:CDS | 45.0% | |
| GAGCATGCTAATGATGGTTC+AGG | + | tig0012581:151753-151772 | Msa1352270:CDS | 45.0% | |
| GCTAATGATGGTTCAGGCAT+TGG | + | tig0012581:151759-151778 | Msa1352270:CDS | 45.0% | |
| !! | ATTAATCAAATTATATTTAT+TGG | + | tig0012581:150561-150580 | Msa1352270:intron | 5.0% |
| !! | TTGAGTGATGGGTAAGGTCG+CGG | + | tig0012581:147825-147844 | Msa1352270:exon | 50.0% |
| !! | CATGCTGGTCTTGCATCTGA+AGG | + | tig0012581:148030-148049 | Msa1352270:CDS | 50.0% |
| TAGTGACTGACTGACCCAGT+AGG | - | tig0012581:148099-148118 | None:intergenic | 50.0% | |
| GAACCGGTCATCAATTGAGG+AGG | - | tig0012581:149037-149056 | None:intergenic | 50.0% | |
| ! | CACGCTTACCTCTGAAGAAC+CGG | - | tig0012581:149053-149072 | None:intergenic | 50.0% |
| GGTGGAGGATGAAAACCTTC+AGG | - | tig0012581:149203-149222 | None:intergenic | 50.0% | |
| ! | GAAGGTTTTCATCCTCCACC+TGG | + | tig0012581:149203-149222 | Msa1352270:CDS | 50.0% |
| AGTTCTCTTTGTCTGCCAGG+TGG | - | tig0012581:149221-149240 | None:intergenic | 50.0% | |
| CCTGGCAGACAAAGAGAACT+CGG | + | tig0012581:149221-149240 | Msa1352270:CDS | 50.0% | |
| ! | CTTGTAGGTTGGCGAAGATG+TGG | + | tig0012581:149912-149931 | Msa1352270:intron | 50.0% |
| ! | TAGGTTGGCGAAGATGTGGT+GGG | + | tig0012581:149916-149935 | Msa1352270:intron | 50.0% |
| GGGAGAACTAACCAAGTCCT+TGG | + | tig0012581:149936-149955 | Msa1352270:CDS | 50.0% | |
| CTGCTGTGATTCTCGGTACT+GGG | + | tig0012581:150244-150263 | Msa1352270:CDS | 50.0% | |
| ACGCGCATGCTATTCCCAAA+TGG | + | tig0012581:150289-150308 | Msa1352270:CDS | 50.0% | |
| ! | GGCATAAGGCCATGCCATTT+GGG | - | tig0012581:150306-150325 | None:intergenic | 50.0% |
| TGGCATAAGGCCATGCCATT+TGG | - | tig0012581:150307-150326 | None:intergenic | 50.0% | |
| !! | GAACGATGGTGGAAGGATCA+AGG | - | tig0012581:150615-150634 | None:intergenic | 50.0% |
| ! | GCTTTCTGGCATGTACTTGG+GGG | + | tig0012581:150653-150672 | Msa1352270:CDS | 50.0% |
| TGGTGCATGGAAGACATGTC+AGG | - | tig0012581:151298-151317 | None:intergenic | 50.0% | |
| !! | TCAGATCTGGTGTTGTGTCG+TGG | - | tig0012581:151318-151337 | None:intergenic | 50.0% |
| CCAAAATACCAGCAGCAGCA+AGG | - | tig0012581:151566-151585 | None:intergenic | 50.0% | |
| ! | CCTTGCTGCTGCTGGTATTT+TGG | + | tig0012581:151563-151582 | Msa1352270:CDS | 50.0% |
| GGAAGAGACACAGTTAAGGG+TGG | + | tig0012581:151603-151622 | Msa1352270:CDS | 50.0% | |
| TTGCTTGGAGGATACGCTGA+AGG | + | tig0012581:151692-151711 | Msa1352270:CDS | 50.0% | |
| GATACGCTGAAGGAACTGCT+TGG | + | tig0012581:151702-151721 | Msa1352270:CDS | 50.0% | |
| GAAGGAACTGCTTGGAGATG+AGG | + | tig0012581:151710-151729 | Msa1352270:CDS | 50.0% | |
| CAGGCTACATTCCGCAAAAC+AGG | - | tig0012581:152100-152119 | None:intergenic | 50.0% | |
| GAGAAAGTGGACACGTAGCG+TGG | + | tig0012581:147924-147943 | Msa1352270:CDS | 55.0% | |
| !! | GCTGGTCTTGCATCTGAAGG+TGG | + | tig0012581:148033-148052 | Msa1352270:CDS | 55.0% |
| TCTCTTTGTCTGCCAGGTGG+AGG | - | tig0012581:149218-149237 | None:intergenic | 55.0% | |
| CCGAGTTCTCTTTGTCTGCC+AGG | - | tig0012581:149224-149243 | None:intergenic | 55.0% | |
| ! | GTAGGTTGGCGAAGATGTGG+TGG | + | tig0012581:149915-149934 | Msa1352270:intron | 55.0% |
| GAGCTGCAACACGCATATCC+AGG | - | tig0012581:149972-149991 | None:intergenic | 55.0% | |
| GCTGCTGTGATTCTCGGTAC+TGG | + | tig0012581:150243-150262 | Msa1352270:CDS | 55.0% | |
| GAGGCAGGTCATGACTAACC+CGG | + | tig0012581:150404-150423 | Msa1352270:intron | 55.0% | |
| !! | TGGTGTTGTGTCGTGGTGCA+TGG | - | tig0012581:151311-151330 | None:intergenic | 55.0% |
| TGTGACATTGTCGCCAGTCG+CGG | + | tig0012581:151534-151553 | Msa1352270:CDS | 55.0% | |
| GTGCTCCTTGGTCGGTAACA+GGG | + | tig0012581:151989-152008 | Msa1352270:three_prime_UTR | 55.0% | |
| TGCTCCTTGGTCGGTAACAG+GGG | + | tig0012581:151990-152009 | Msa1352270:three_prime_UTR | 55.0% | |
| !! | AGTGATGGGTAAGGTCGCGG+TGG | + | tig0012581:147828-147847 | Msa1352270:exon | 60.0% |
| !! | GTGATGGGTAAGGTCGCGGT+GGG | + | tig0012581:147829-147848 | Msa1352270:exon | 60.0% |
| GGGCAGACCATGTCTGCTGT+GGG | + | tig0012581:151965-151984 | Msa1352270:three_prime_UTR | 60.0% | |
| GGCAGACCATGTCTGCTGTG+GGG | + | tig0012581:151966-151985 | Msa1352270:three_prime_UTR | 60.0% | |
| GCAGACCATGTCTGCTGTGG+GGG | + | tig0012581:151967-151986 | Msa1352270:three_prime_UTR | 60.0% | |
| GGTGCTCCTTGGTCGGTAAC+AGG | + | tig0012581:151988-152007 | Msa1352270:three_prime_UTR | 60.0% | |
| TAAGGTCGCGGTGGGAGCTG+CGG | + | tig0012581:147837-147856 | Msa1352270:CDS | 65.0% | |
| AAGAGCCGCCGCGGCACAAA+CGG | - | tig0012581:147878-147897 | None:intergenic | 65.0% | |
| CGGGCAGACCATGTCTGCTG+TGG | + | tig0012581:151964-151983 | Msa1352270:three_prime_UTR | 65.0% | |
| GAGCACCCCCACAGCAGACA+TGG | - | tig0012581:151975-151994 | None:intergenic | 65.0% | |
| !! | TCTGCTGTGGGGGTGCTCCT+TGG | + | tig0012581:151977-151996 | Msa1352270:three_prime_UTR | 65.0% |
| !! | CTGTGGGGGTGCTCCTTGGT+CGG | + | tig0012581:151981-152000 | Msa1352270:three_prime_UTR | 65.0% |
| GGTGCCCCTGTTACCGACCA+AGG | - | tig0012581:151997-152016 | None:intergenic | 65.0% | |
| TTGTGCCGCGGCGGCTCTTG+TGG | + | tig0012581:147879-147898 | Msa1352270:CDS | 70.0% | |
| AGCAAGGCGTGCACCGCGAC+TGG | - | tig0012581:151550-151569 | None:intergenic | 70.0% | |
| GGTGCACGCCTTGCTGCTGC+TGG | + | tig0012581:151555-151574 | Msa1352270:CDS | 70.0% | |
| TGCCGCCGCCGTTTGTGCCG+CGG | + | tig0012581:147867-147886 | Msa1352270:CDS | 75.0% | |
| AGCCGCCGCGGCACAAACGG+CGG | - | tig0012581:147875-147894 | None:intergenic | 75.0% | |
| CCGCACCACAAGAGCCGCCG+CGG | - | tig0012581:147887-147906 | None:intergenic | 75.0% | |
| CCGCGGCGGCTCTTGTGGTG+CGG | + | tig0012581:147884-147903 | Msa1352270:CDS | 75.0% | |
| ! | CGCCGCGGCACAAACGGCGG+CGG | - | tig0012581:147872-147891 | None:intergenic | 80.0% |
| ! | CGCCGCCGTTTGTGCCGCGG+CGG | + | tig0012581:147870-147889 | Msa1352270:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0012581 | gene | 147556 | 152417 | 147556 | ID=Msa1352270;Name=Msa1352270 |
| tig0012581 | mRNA | 147556 | 152417 | 147556 | ID=Msa1352270-mRNA-1;Parent=Msa1352270;Name=Msa1352270-mRNA-1;_AED=0.05;_eAED=0.05;_QI=276|1|1|1|1|1|9|581|498 |
| tig0012581 | exon | 147556 | 148103 | 147556 | ID=Msa1352270-mRNA-1:exon:8068;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 148913 | 149063 | 148913 | ID=Msa1352270-mRNA-1:exon:8069;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 149149 | 149331 | 149149 | ID=Msa1352270-mRNA-1:exon:8070;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 149919 | 149993 | 149919 | ID=Msa1352270-mRNA-1:exon:8071;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 150186 | 150341 | 150186 | ID=Msa1352270-mRNA-1:exon:8072;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 150453 | 150551 | 150453 | ID=Msa1352270-mRNA-1:exon:8073;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 150639 | 150769 | 150639 | ID=Msa1352270-mRNA-1:exon:8074;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 151291 | 151372 | 151291 | ID=Msa1352270-mRNA-1:exon:8075;Parent=Msa1352270-mRNA-1 |
| tig0012581 | exon | 151489 | 152417 | 151489 | ID=Msa1352270-mRNA-1:exon:8076;Parent=Msa1352270-mRNA-1 |
| tig0012581 | five_prime_UTR | 147556 | 147831 | 147556 | ID=Msa1352270-mRNA-1:five_prime_utr;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 147832 | 148103 | 147832 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 148913 | 149063 | 148913 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 149149 | 149331 | 149149 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 149919 | 149993 | 149919 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 150186 | 150341 | 150186 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 150453 | 150551 | 150453 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 150639 | 150769 | 150639 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 151291 | 151372 | 151291 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | CDS | 151489 | 151836 | 151489 | ID=Msa1352270-mRNA-1:cds;Parent=Msa1352270-mRNA-1 |
| tig0012581 | three_prime_UTR | 151837 | 152417 | 151837 | ID=Msa1352270-mRNA-1:three_prime_utr;Parent=Msa1352270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
