AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1132540


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132540 MtrunA17_Chr5g0399371 90.305 361 16 3 1 354 1 349 0.0 664
Msa1132540 MtrunA17_Chr7g0220151 71.963 321 78 1 34 354 16 324 6.74e-170 476
Msa1132540 MtrunA17_Chr1g0146321 25.243 206 139 5 144 344 91 286 8.20e-13 68.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1132540 AT4G17360.1 61.652 339 108 3 26 354 2 328 1.70e-154 437
Msa1132540 AT5G47435.1 61.677 334 111 3 26 354 2 323 9.37e-154 435
Msa1132540 AT5G47435.2 61.677 334 111 3 26 354 2 323 9.37e-154 435
Msa1132540 AT4G17360.2 60.159 251 90 2 26 266 2 252 3.67e-111 324
Msa1132540 AT4G17360.3 58.257 218 81 2 26 233 2 219 2.64e-91 273
Msa1132540 AT1G31220.1 24.638 207 138 4 144 343 77 272 5.29e-13 69.3

Find 64 sgRNAs with CRISPR-Local

Find 115 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAACGAATCACTTCGCTTTC+TGG 0.117075 7_3:+85400144 None:intergenic
CATGTAATTGTTCAATTATT+TGG 0.131222 7_3:+85401566 None:intergenic
AAGAAGATTACCTGCTTAAA+TGG 0.182244 7_3:+85399809 None:intergenic
AGTTGTTCAATTACACATTT+TGG 0.191040 7_3:+85399224 None:intergenic
GATGCAGGTGTGAAATTAAT+TGG 0.258885 7_3:-85399627 Msa1132540:CDS
CGGATGTTGTTCATTTCATT+TGG 0.291089 7_3:+85401489 None:intergenic
ATTTAAGCAGGTAATCTTCT+TGG 0.291519 7_3:-85399807 Msa1132540:CDS
TTCACCATTTGTTCAATAAT+AGG 0.298667 7_3:+85399564 None:intergenic
TGGATATCACTTGTGTAATT+AGG 0.320225 7_3:-85400283 Msa1132540:intron
AAGTTCAGGAAAATAATTAA+TGG 0.336335 7_3:-85401602 Msa1132540:five_prime_UTR
TTTAAGCAGGTAATCTTCTT+GGG 0.345527 7_3:-85399806 Msa1132540:CDS
ACTGTAATTTCTGACAAGTT+TGG 0.369105 7_3:+85401443 None:intergenic
TGCCTGTTGCCATCATTTAG+AGG 0.382262 7_3:-85399839 Msa1132540:CDS
AGAACAGCAATCTTATACTT+AGG 0.389913 7_3:+85400923 None:intergenic
TCGTCTTCCATTTGCATTCG+AGG 0.391948 7_3:+85401010 None:intergenic
CGCCTCTAAATGATGGCAAC+AGG 0.408630 7_3:+85399837 None:intergenic
TGTTCTTTGCATCTGTTCTC+AGG 0.412713 7_3:+85399128 None:intergenic
TAGACCACGTATATAAGTTC+AGG 0.421366 7_3:-85401616 None:intergenic
CGCTTTCTGGACCTCTATCA+TGG 0.423861 7_3:+85400157 None:intergenic
GCAGAGGTTTGTGCAGAAAT+CGG 0.428242 7_3:-85399420 Msa1132540:CDS
AATAATGTTACCACCATTTG+AGG 0.432255 7_3:+85401205 None:intergenic
AGTTCAGGAAAATAATTAAT+GGG 0.433866 7_3:-85401601 Msa1132540:five_prime_UTR
TGTTGGCAGGCCTTTGATGC+AGG 0.452558 7_3:-85399642 Msa1132540:intron
TCCATCCTGCCATCCGTGTA+AGG 0.455247 7_3:+85400316 None:intergenic
AGACATGGATACCATGGGTT+AGG 0.456246 7_3:+85401382 None:intergenic
TGCTGTTCTTGCGTCAAGCC+AGG 0.464782 7_3:-85400909 Msa1132540:intron
TCAGATTGCATTGCCTCAAA+TGG 0.473487 7_3:-85401218 Msa1132540:CDS
GATTACCTGCTTAAATGGAT+TGG 0.480831 7_3:+85399814 None:intergenic
TCCAGTTCCTTCCTAACCCA+TGG 0.492046 7_3:-85401393 Msa1132540:CDS
TAAATGGCCTCGAATGCAAA+TGG 0.495596 7_3:-85401017 Msa1132540:CDS
TGATTCCTTACACGGATGGC+AGG 0.499112 7_3:-85400321 Msa1132540:CDS
TGGACCTATTATTGAACAAA+TGG 0.500868 7_3:-85399568 Msa1132540:intron
GTGACTGAAGGACGTGATGC+TGG 0.501654 7_3:-85399588 Msa1132540:CDS
GAATGTGAGGCTTCGCCGTA+AGG 0.507920 7_3:-85399783 Msa1132540:intron
TGAAACCAGAACATAATCTT+CGG 0.513108 7_3:+85401469 None:intergenic
TAATTTCACACCTGCATCAA+AGG 0.519469 7_3:+85399632 None:intergenic
TGAGAAACAATGTCTGTCAA+TGG 0.529058 7_3:-85399390 Msa1132540:CDS
AGAAGAGGATATCTTAAAGC+TGG 0.532640 7_3:-85400064 Msa1132540:CDS
AGGCGCCAATCCATTTAAGC+AGG 0.538548 7_3:-85399819 Msa1132540:CDS
AACATCCGAAGATTATGTTC+TGG 0.544646 7_3:-85401474 Msa1132540:CDS
TGTCTAATTGATTCCTTACA+CGG 0.549349 7_3:-85400329 Msa1132540:CDS
TTTAATAGTAACCATGATAG+AGG 0.555002 7_3:-85400168 Msa1132540:intron
TAAATGATGGCAACAGGCAA+TGG 0.555032 7_3:+85399843 None:intergenic
AAAAGAGAATAAAAGAGAAG+AGG 0.557542 7_3:-85400079 Msa1132540:CDS
CTCATAAAGATGACTTGCAG+AGG 0.558739 7_3:-85399436 Msa1132540:CDS
TTGACAGGTTAAAAGTGTCA+AGG 0.561404 7_3:+85399159 None:intergenic
ACCATGGGTTAGGAAGGAAC+TGG 0.564927 7_3:+85401392 None:intergenic
GGATTGGCGCCTCTAAATGA+TGG 0.569201 7_3:+85399830 None:intergenic
ATGGATACCATGGGTTAGGA+AGG 0.575698 7_3:+85401386 None:intergenic
TTAAGCAGGTAATCTTCTTG+GGG 0.579261 7_3:-85399805 Msa1132540:CDS
ATTACACAAGTGATATCCAC+TGG 0.579370 7_3:+85400287 None:intergenic
TAATCTTCTTGGGGAATGTG+AGG 0.587182 7_3:-85399796 Msa1132540:CDS
TCCTTACACGGATGGCAGGA+TGG 0.590140 7_3:-85400317 Msa1132540:CDS
TAATTGATTCCTTACACGGA+TGG 0.590474 7_3:-85400325 Msa1132540:CDS
ATTGAAAGACATGGATACCA+TGG 0.597080 7_3:+85401376 None:intergenic
GATTGCATTGCCTCAAATGG+TGG 0.622165 7_3:-85401215 Msa1132540:CDS
TTATACTTAGGATCAAGAGC+TGG 0.624265 7_3:+85400935 None:intergenic
AGTACTTGCAAGGTATACGA+AGG 0.634867 7_3:-85400022 Msa1132540:intron
TTACAGGACATTGAAAGACA+TGG 0.637625 7_3:+85401367 None:intergenic
TTGAAAGACATGGATACCAT+GGG 0.638453 7_3:+85401377 None:intergenic
GTAAGGAATCAATTAGACAA+TGG 0.650271 7_3:+85400333 None:intergenic
AATAATTGAACAATTACATG+TGG 0.654171 7_3:-85401563 Msa1132540:exon
GCAGGATGGAAGACTTCCAG+TGG 0.665552 7_3:-85400303 Msa1132540:CDS
TGGTGGTAACATTATTGCTG+CGG 0.706543 7_3:-85401198 Msa1132540:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ACTATAATTTATATGTATAA+AGG - chr7_3:85400133-85400152 Msa1132540:CDS 10.0%
!! AAATGATGATAATAATTCAA+TGG + chr7_3:85399426-85399445 None:intergenic 15.0%
!!! TATTTTTTTGTTTTTGTGAT+AGG - chr7_3:85399479-85399498 Msa1132540:intron 15.0%
!! TTTATTATTCAAAAATTGAG+AGG + chr7_3:85400095-85400114 None:intergenic 15.0%
!!! ATTTTTGAATAATAAAGACA+TGG - chr7_3:85400099-85400118 Msa1132540:CDS 15.0%
!! AATTTCTTTCGAAAAATAAA+AGG - chr7_3:85400240-85400259 Msa1132540:intron 15.0%
!!! ACCAAAAATGAATAATTTTA+AGG - chr7_3:85400314-85400333 Msa1132540:CDS 15.0%
!!! TCCTTAAAATTATTCATTTT+TGG + chr7_3:85400318-85400337 None:intergenic 15.0%
!!! GTTGTTTTTAAATAATGATA+AGG + chr7_3:85400647-85400666 None:intergenic 15.0%
!! AAGTTCAGGAAAATAATTAA+TGG - chr7_3:85399144-85399163 Msa1132540:three_prime_UTR 20.0%
!! AGTTCAGGAAAATAATTAAT+GGG - chr7_3:85399145-85399164 Msa1132540:three_prime_UTR 20.0%
!! CATGTAATTGTTCAATTATT+TGG + chr7_3:85399183-85399202 None:intergenic 20.0%
!! AATAATTGAACAATTACATG+TGG - chr7_3:85399183-85399202 Msa1132540:three_prime_UTR 20.0%
!! TTTACATACATATAGATAAC+AGG + chr7_3:85399886-85399905 None:intergenic 20.0%
!! TTCTATAAATAGAGTTAGTT+AGG - chr7_3:85399948-85399967 Msa1132540:intron 20.0%
!! CATATAAAATGAAGATAACA+TGG + chr7_3:85399982-85400001 None:intergenic 20.0%
!! TTTATCAATGATGAATACAT+GGG + chr7_3:85400027-85400046 None:intergenic 20.0%
!! ATTTATCAATGATGAATACA+TGG + chr7_3:85400028-85400047 None:intergenic 20.0%
!!! ATTTTTCGAAAGAAATTGAA+AGG + chr7_3:85400237-85400256 None:intergenic 20.0%
!! TACTATTAAATGTATCAACA+TGG + chr7_3:85400568-85400587 None:intergenic 20.0%
!!! TATTTTCTTAAGAGTAATTG+CGG - chr7_3:85400807-85400826 Msa1132540:intron 20.0%
!!! TAATATCTAGCAACTTTTTA+AGG - chr7_3:85400851-85400870 Msa1132540:intron 20.0%
!! TTTAATATGATAGGTTATGT+TGG - chr7_3:85401087-85401106 Msa1132540:intron 20.0%
!!! AATTACACATTTTGGTAAAA+TGG + chr7_3:85401517-85401536 None:intergenic 20.0%
! AAACATTTCACATGTGATAT+TGG + chr7_3:85399455-85399474 None:intergenic 25.0%
!! TTTTTGTGATAGGATTCAAT+TGG - chr7_3:85399489-85399508 Msa1132540:intron 25.0%
!! GTTTTTGTACCTCAAAATAA+AGG - chr7_3:85399573-85399592 Msa1132540:CDS 25.0%
!! TTGTTTTCGATCATGTTAAA+TGG - chr7_3:85399713-85399732 Msa1132540:intron 25.0%
! TTTAATAGTAACCATGATAG+AGG - chr7_3:85400578-85400597 Msa1132540:intron 25.0%
! AAAAGAGAATAAAAGAGAAG+AGG - chr7_3:85400667-85400686 Msa1132540:intron 25.0%
! AATAAGCTAAAAACACCTTA+CGG + chr7_3:85400981-85401000 None:intergenic 25.0%
! CAAAGTTGTTTATCCAAAAA+TGG - chr7_3:85401054-85401073 Msa1132540:intron 25.0%
! GCAAATGTGTTTAATATGAT+AGG - chr7_3:85401078-85401097 Msa1132540:intron 25.0%
! TTCACCATTTGTTCAATAAT+AGG + chr7_3:85401185-85401204 None:intergenic 25.0%
!! ACAGTATTCTTTTCTTCATA+TGG + chr7_3:85401414-85401433 None:intergenic 25.0%
!! AAGAATACTGTTGTATTTTG+AGG - chr7_3:85401423-85401442 Msa1132540:CDS 25.0%
!!! AGAATACTGTTGTATTTTGA+GGG - chr7_3:85401424-85401443 Msa1132540:CDS 25.0%
!!! TTTTTTTTTTTTTGAGGGCA+AGG + chr7_3:85401479-85401498 None:intergenic 25.0%
!! AGTTGTTCAATTACACATTT+TGG + chr7_3:85401525-85401544 None:intergenic 25.0%
TGAAACCAGAACATAATCTT+CGG + chr7_3:85399280-85399299 None:intergenic 30.0%
ACTGTAATTTCTGACAAGTT+TGG + chr7_3:85399306-85399325 None:intergenic 30.0%
AATGGATGTGAGAATATGAA+TGG + chr7_3:85399408-85399427 None:intergenic 30.0%
AATAATGTTACCACCATTTG+AGG + chr7_3:85399544-85399563 None:intergenic 30.0%
!!! TAGAAGAGTCCTTTATTTTG+AGG + chr7_3:85399585-85399604 None:intergenic 30.0%
AGAACAGCAATCTTATACTT+AGG + chr7_3:85399826-85399845 None:intergenic 30.0%
AACATTTAATAACGTGTACC+TGG + chr7_3:85399858-85399877 None:intergenic 30.0%
GTAAGGAATCAATTAGACAA+TGG + chr7_3:85400416-85400435 None:intergenic 30.0%
! TGTCTAATTGATTCCTTACA+CGG - chr7_3:85400417-85400436 Msa1132540:intron 30.0%
TGGATATCACTTGTGTAATT+AGG - chr7_3:85400463-85400482 Msa1132540:intron 30.0%
! AAGTGATTCGTTTTCTTCAA+AGG - chr7_3:85400612-85400631 Msa1132540:intron 30.0%
!!! CTGATTTTTTAGTACTTGCA+AGG - chr7_3:85400714-85400733 Msa1132540:intron 30.0%
AAGAAGATTACCTGCTTAAA+TGG + chr7_3:85400940-85400959 None:intergenic 30.0%
ATTTAAGCAGGTAATCTTCT+TGG - chr7_3:85400939-85400958 Msa1132540:CDS 30.0%
TTTAAGCAGGTAATCTTCTT+GGG - chr7_3:85400940-85400959 Msa1132540:CDS 30.0%
! AAACACATTTGCTCCATTTT+TGG + chr7_3:85401070-85401089 None:intergenic 30.0%
TGGACCTATTATTGAACAAA+TGG - chr7_3:85401178-85401197 Msa1132540:CDS 30.0%
CGGATGTTGTTCATTTCATT+TGG + chr7_3:85399260-85399279 None:intergenic 35.0%
AACATCCGAAGATTATGTTC+TGG - chr7_3:85399272-85399291 Msa1132540:intron 35.0%
TTGAAAGACATGGATACCAT+GGG + chr7_3:85399372-85399391 None:intergenic 35.0%
ATTGAAAGACATGGATACCA+TGG + chr7_3:85399373-85399392 None:intergenic 35.0%
TTACAGGACATTGAAAGACA+TGG + chr7_3:85399382-85399401 None:intergenic 35.0%
AGAATATGAATGGCACTTAC+AGG + chr7_3:85399398-85399417 None:intergenic 35.0%
TTATACTTAGGATCAAGAGC+TGG + chr7_3:85399814-85399833 None:intergenic 35.0%
CATGAACATGCTTATTCACA+AGG - chr7_3:85400272-85400291 Msa1132540:intron 35.0%
TGATGCAATTGTCTACACTT+TGG + chr7_3:85400355-85400374 None:intergenic 35.0%
! TAATTGATTCCTTACACGGA+TGG - chr7_3:85400421-85400440 Msa1132540:intron 35.0%
ATTACACAAGTGATATCCAC+TGG + chr7_3:85400462-85400481 None:intergenic 35.0%
AGAAGAGGATATCTTAAAGC+TGG - chr7_3:85400682-85400701 Msa1132540:intron 35.0%
!! AGCAACTTTTTAAGGAGCTA+TGG - chr7_3:85400859-85400878 Msa1132540:intron 35.0%
!! CTTTTTAAGGAGCTATGGAA+AGG - chr7_3:85400864-85400883 Msa1132540:intron 35.0%
GATTACCTGCTTAAATGGAT+TGG + chr7_3:85400935-85400954 None:intergenic 35.0%
TTAAGCAGGTAATCTTCTTG+GGG - chr7_3:85400941-85400960 Msa1132540:CDS 35.0%
ATATGATAGGTTATGTTGGC+AGG - chr7_3:85401091-85401110 Msa1132540:intron 35.0%
TAATTTCACACCTGCATCAA+AGG + chr7_3:85401117-85401136 None:intergenic 35.0%
GATGCAGGTGTGAAATTAAT+TGG - chr7_3:85401119-85401138 Msa1132540:intron 35.0%
!! ACAAGTCATTTTGTGACTGA+AGG - chr7_3:85401146-85401165 Msa1132540:intron 35.0%
TGAGAAACAATGTCTGTCAA+TGG - chr7_3:85401356-85401375 Msa1132540:intron 35.0%
!! TTGACAGGTTAAAAGTGTCA+AGG + chr7_3:85401590-85401609 None:intergenic 35.0%
!! TCTCAGGTGAAAATTTTGAC+AGG + chr7_3:85401605-85401624 None:intergenic 35.0%
TCAGATTGCATTGCCTCAAA+TGG - chr7_3:85399528-85399547 Msa1132540:intron 40.0%
TGGTGGTAACATTATTGCTG+CGG - chr7_3:85399548-85399567 Msa1132540:intron 40.0%
TAAATGGCCTCGAATGCAAA+TGG - chr7_3:85399729-85399748 Msa1132540:intron 40.0%
GTCCTGCAACAAAATAGAGA+GGG + chr7_3:85400394-85400413 None:intergenic 40.0%
AAACGAATCACTTCGCTTTC+TGG + chr7_3:85400605-85400624 None:intergenic 40.0%
AGTACTTGCAAGGTATACGA+AGG - chr7_3:85400724-85400743 Msa1132540:intron 40.0%
TAAATGATGGCAACAGGCAA+TGG + chr7_3:85400906-85400925 None:intergenic 40.0%
TAATCTTCTTGGGGAATGTG+AGG - chr7_3:85400950-85400969 Msa1132540:CDS 40.0%
! CTCATAAAGATGACTTGCAG+AGG - chr7_3:85401310-85401329 Msa1132540:intron 40.0%
!! TTTTTGAGGGCAAGGTTTTG+AGG + chr7_3:85401471-85401490 None:intergenic 40.0%
!! ATGGATACCATGGGTTAGGA+AGG + chr7_3:85399363-85399382 None:intergenic 45.0%
AGACATGGATACCATGGGTT+AGG + chr7_3:85399367-85399386 None:intergenic 45.0%
GATTGCATTGCCTCAAATGG+TGG - chr7_3:85399531-85399550 Msa1132540:intron 45.0%
TCGTCTTCCATTTGCATTCG+AGG + chr7_3:85399739-85399758 None:intergenic 45.0%
! TGCCCTCTCTATTTTGTTGC+AGG - chr7_3:85400389-85400408 Msa1132540:intron 45.0%
GGTCCTGCAACAAAATAGAG+AGG + chr7_3:85400395-85400414 None:intergenic 45.0%
TGCCTGTTGCCATCATTTAG+AGG - chr7_3:85400907-85400926 Msa1132540:intron 45.0%
! GCTACAACCTTTTCAACTGC+AGG - chr7_3:85401275-85401294 Msa1132540:intron 45.0%
CTCTCAACCTGCAGTTGAAA+AGG + chr7_3:85401285-85401304 None:intergenic 45.0%
GCAGAGGTTTGTGCAGAAAT+CGG - chr7_3:85401326-85401345 Msa1132540:intron 45.0%
!!! ATTTTTTTTTTTTTTTTTGA+GGG + chr7_3:85401484-85401503 None:intergenic 5.0%
!!! TATTTTTTTTTTTTTTTTTG+AGG + chr7_3:85401485-85401504 None:intergenic 5.0%
TCCAGTTCCTTCCTAACCCA+TGG - chr7_3:85399353-85399372 Msa1132540:CDS 50.0%
!! ACCATGGGTTAGGAAGGAAC+TGG + chr7_3:85399357-85399376 None:intergenic 50.0%
TGATTCCTTACACGGATGGC+AGG - chr7_3:85400425-85400444 Msa1132540:intron 50.0%
CGCTTTCTGGACCTCTATCA+TGG + chr7_3:85400592-85400611 None:intergenic 50.0%
CGCCTCTAAATGATGGCAAC+AGG + chr7_3:85400912-85400931 None:intergenic 50.0%
! GGATTGGCGCCTCTAAATGA+TGG + chr7_3:85400919-85400938 None:intergenic 50.0%
AGGCGCCAATCCATTTAAGC+AGG - chr7_3:85400927-85400946 Msa1132540:CDS 50.0%
TGCTGTTCTTGCGTCAAGCC+AGG - chr7_3:85399837-85399856 Msa1132540:CDS 55.0%
TCCTTACACGGATGGCAGGA+TGG - chr7_3:85400429-85400448 Msa1132540:intron 55.0%
TCCATCCTGCCATCCGTGTA+AGG + chr7_3:85400433-85400452 None:intergenic 55.0%
GCAGGATGGAAGACTTCCAG+TGG - chr7_3:85400443-85400462 Msa1132540:intron 55.0%
GAATGTGAGGCTTCGCCGTA+AGG - chr7_3:85400963-85400982 Msa1132540:CDS 55.0%
TGTTGGCAGGCCTTTGATGC+AGG - chr7_3:85401104-85401123 Msa1132540:intron 55.0%
GTGACTGAAGGACGTGATGC+TGG - chr7_3:85401158-85401177 Msa1132540:CDS 55.0%
Chromosome Type Strat End Strand Name
chr7_3 gene 85399135 85401633 85399135 ID=Msa1132540;Name=Msa1132540
chr7_3 mRNA 85399135 85401633 85399135 ID=Msa1132540-mRNA-1;Parent=Msa1132540;Name=Msa1132540-mRNA-1;_AED=0.16;_eAED=0.16;_QI=65|0.87|0.88|1|0.87|0.77|9|147|354
chr7_3 exon 85399135 85399273 85399135 ID=Msa1132540-mRNA-1:exon:25605;Parent=Msa1132540-mRNA-1
chr7_3 exon 85399317 85399471 85399317 ID=Msa1132540-mRNA-1:exon:25604;Parent=Msa1132540-mRNA-1
chr7_3 exon 85399569 85399655 85399569 ID=Msa1132540-mRNA-1:exon:25603;Parent=Msa1132540-mRNA-1
chr7_3 exon 85399784 85399918 85399784 ID=Msa1132540-mRNA-1:exon:25602;Parent=Msa1132540-mRNA-1
chr7_3 exon 85400023 85400182 85400023 ID=Msa1132540-mRNA-1:exon:25601;Parent=Msa1132540-mRNA-1
chr7_3 exon 85400284 85400357 85400284 ID=Msa1132540-mRNA-1:exon:25600;Parent=Msa1132540-mRNA-1
chr7_3 exon 85400910 85401060 85400910 ID=Msa1132540-mRNA-1:exon:25599;Parent=Msa1132540-mRNA-1
chr7_3 exon 85401155 85401267 85401155 ID=Msa1132540-mRNA-1:exon:25598;Parent=Msa1132540-mRNA-1
chr7_3 exon 85401371 85401633 85401371 ID=Msa1132540-mRNA-1:exon:25597;Parent=Msa1132540-mRNA-1
chr7_3 five_prime_UTR 85401569 85401633 85401569 ID=Msa1132540-mRNA-1:five_prime_utr;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85401371 85401568 85401371 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85401155 85401267 85401155 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85400910 85401060 85400910 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85400284 85400357 85400284 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85400023 85400182 85400023 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85399784 85399918 85399784 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85399569 85399655 85399569 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 CDS 85399325 85399471 85399325 ID=Msa1132540-mRNA-1:cds;Parent=Msa1132540-mRNA-1
chr7_3 three_prime_UTR 85399317 85399324 85399317 ID=Msa1132540-mRNA-1:three_prime_utr;Parent=Msa1132540-mRNA-1
chr7_3 three_prime_UTR 85399135 85399273 85399135 ID=Msa1132540-mRNA-1:three_prime_utr;Parent=Msa1132540-mRNA-1
Gene Sequence

>Msa1132540

ATGTGGTGTGTGAACACAATTGCACAACTCAAATTAAACAGATTAATTTTTAGACAACCAAATGAAATGAACAACATCCGAAGATTATGTTCTGGTTTCAGTTCCAAACTTGTCAGAAATTACAGTCACAATTCTTTTAATGATAATTCTGCTTCCAGTTCCTTCCTAACCCATGGTATCCATGTCTTTCAATGTCCTGATTCAATTGGAATTGTAGCAAAACTATCAGATTGCATTGCCTCAAATGGTGGTAACATTATTGCTGCGGATGTTTTTGTACCTCAAAATAAAGGACTCTTCTACTCTAGAACTGATTTTGTTTTCGATCATGTTAAATGGCCTCGAATGCAAATGGAAGACGATTTCTTAAAAATCTCTAAAACATATAATGCTGTGAGATCTATTCTAAAAGTGCCAGCTCTTGATCCTAAGTATAAGATTGCTGTTCTTGCGTCAAGCCAGGACCATTGTCTAATTGATTCCTTACACGGATGGCAGGATGGAAGACTTCCAGTGGATATCACTTGTGTAATTAGTAACCATGATAGAGGTCCAGAAAGCGAAGTGATTCGTTTTCTTCAAAGGCACAATATTCCTTATCATTATTTAAAAACAACAAAAGAGAATAAAAGAGAAGAGGATATCTTAAAGCTGGTTCAAGACACTGATTTTTTAGTACTTGCAAGGTATACGAAGATAATATCTAGCAACTTTTTAAGGAGCTATGGAAAGGATATAATTAACATTCACCATTGCCTGTTGCCATCATTTAGAGGCGCCAATCCATTTAAGCAGGTAATCTTCTTGGGGAATGTGAGGCTTCGCCGTAAGGCCTTTGATGCAGGTGTGAAATTAATTGGTGCGACAAGTCATTTTGTGACTGAAGGACGTGATGCTGGACCTATTATTGAACAAATGGTTGAGAGAGTTTCTCATAAAGATGACTTGCAGAGGTTTGTGCAGAAATCGGAAAACATTGAGAAACAATGTCTGTCAATGGCTATCAGATCTTACTGCGAGCTTCGAGTATTACCATATGAAGAAAAGAATACTGTTGTATTTTGA

Protein sequence

>Msa1132540

MWCVNTIAQLKLNRLIFRQPNEMNNIRRLCSGFSSKLVRNYSHNSFNDNSASSSFLTHGIHVFQCPDSIGIVAKLSDCIASNGGNIIAADVFVPQNKGLFYSRTDFVFDHVKWPRMQMEDDFLKISKTYNAVRSILKVPALDPKYKIAVLASSQDHCLIDSLHGWQDGRLPVDITCVISNHDRGPESEVIRFLQRHNIPYHYLKTTKENKREEDILKLVQDTDFLVLARYTKIISSNFLRSYGKDIINIHHCLLPSFRGANPFKQVIFLGNVRLRRKAFDAGVKLIGATSHFVTEGRDAGPIIEQMVERVSHKDDLQRFVQKSENIEKQCLSMAIRSYCELRVLPYEEKNTVVF*