AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0734430


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734430 MtrunA17_Chr5g0430761 97.308 483 13 0 1 483 1 483 0.0 977
Msa0734430 MtrunA17_Chr3g0105421 70.635 504 134 4 25 528 31 520 0.0 681
Msa0734430 MtrunA17_Chr8g0366341 51.449 138 18 1 391 528 4 92 4.42e-38 135
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0734430 AT1G07110.1 64.202 514 166 7 25 528 23 528 0.0 622
Msa0734430 AT3G30200.1 62.821 78 27 1 144 221 50 125 3.59e-20 94.4

Find 130 sgRNAs with CRISPR-Local

Find 737 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTACAAAATCTTCTAGTTTA+AGG 0.070887 5_1:+48442704 Msa0734430:CDS
GTTATTGCAGATTATCTTTC+TGG 0.111386 5_1:+48445857 Msa0734430:intron
AGTTAAATATTTACAGTTTC+AGG 0.169637 5_1:-48439849 None:intergenic
CAAGGTGAATTCTCATCTTT+TGG 0.188916 5_1:-48438507 None:intergenic
AAGAATTGCCTTCTCATAAT+TGG 0.211422 5_1:-48446081 None:intergenic
TGCATTGCTTGGGGATTGTT+TGG 0.252838 5_1:+48437234 Msa0734430:CDS
GAATGTCTCTTCTGCGAGTT+TGG 0.290246 5_1:+48439668 Msa0734430:intron
CGCTAAATGTTTATCCTCCT+TGG 0.293374 5_1:-48442961 None:intergenic
AGCTAGTTGGAGGGCTTATA+AGG 0.303691 5_1:+48438677 Msa0734430:CDS
AAGAAATATGCTGATGAAAT+TGG 0.310175 5_1:+48445715 Msa0734430:CDS
GCATATACAGCAGATGAATT+TGG 0.316849 5_1:-48439735 None:intergenic
TTTGTTCTTCTGCATTGCTT+GGG 0.321000 5_1:+48437224 Msa0734430:CDS
GCAGCTGGAGCTGTTGCAGC+TGG 0.326927 5_1:+48442912 Msa0734430:CDS
TTTGAGAATTTCAGAAGCTT+TGG 0.329623 5_1:+48438464 Msa0734430:intron
ATTTACTGTTGATCTTAGTT+TGG 0.338847 5_1:+48442729 Msa0734430:CDS
ACAGAAACATAGAGCAATTC+AGG 0.344331 5_1:-48437148 None:intergenic
TTACGTGCCTCTATGCCTTC+AGG 0.365144 5_1:-48444829 None:intergenic
CGTAGCCCAGCCTCAAAATC+TGG 0.366497 5_1:-48446038 None:intergenic
GCAACAGCTCCAGCTGCTGC+TGG 0.372798 5_1:-48442906 None:intergenic
CAAAGTTTCTTCCTTTGATC+TGG 0.373266 5_1:+48438653 Msa0734430:CDS
TGCCGTTGCTGATCAGATGC+TGG 0.374741 5_1:+48442935 Msa0734430:CDS
TCGCTGCTTGCTACTGTTTG+TGG 0.379212 5_1:-48445693 None:intergenic
TCAATACCCTAGAGCCATCT+AGG 0.381190 5_1:+48442566 Msa0734430:CDS
GTACACCCAGGTAGCAAAAC+TGG 0.384927 5_1:+48445530 Msa0734430:intron
CCAAGTCGCGTACTTGTTGC+AGG 0.391682 5_1:+48438546 Msa0734430:CDS
CCTCAAGCACGGAGCTAGTC+AGG 0.398596 5_1:+48443723 Msa0734430:CDS
ATACCCACTATTCCGTGATC+TGG 0.402871 5_1:-48439778 None:intergenic
TAAGGAGAACTTTCATCCTT+CGG 0.403360 5_1:+48438695 Msa0734430:CDS
CCTTTGATCTGGCAGCTAGT+TGG 0.408429 5_1:+48438664 Msa0734430:CDS
CGACATTCAGACACCCTAGA+TGG 0.411807 5_1:-48442580 None:intergenic
AATCCAATCCGCGCTATCGC+TGG 0.428193 5_1:+48437181 Msa0734430:CDS
CTCACCTTGTAAAGGACATT+GGG 0.431275 5_1:-48446773 None:intergenic
TTTGGAGAACTTGAGGGAGC+TGG 0.436441 5_1:-48439717 None:intergenic
GCTAAATGTTTATCCTCCTT+GGG 0.436739 5_1:-48442960 None:intergenic
GTTTAAGCTTGATAATGATC+AGG 0.436859 5_1:+48438599 Msa0734430:CDS
TTTGCAATAGCAGTCGCTAT+AGG 0.439364 5_1:+48447613 Msa0734430:CDS
TTTGTTGTTCCACAAAATCA+TGG 0.440136 5_1:+48437402 Msa0734430:CDS
TTGATCTGGCAGCTAGTTGG+AGG 0.444690 5_1:+48438667 Msa0734430:CDS
ACAAGATATCTTCGCTGGTT+GGG 0.446237 5_1:+48443263 Msa0734430:CDS
AATTCATTTCCAGCAGCAGC+TGG 0.462347 5_1:+48442897 Msa0734430:CDS
TTCATCCTTCGGCTGTACGC+GGG 0.471483 5_1:+48438706 Msa0734430:CDS
AATCCCAGATCACGGAATAG+TGG 0.473281 5_1:+48439774 Msa0734430:CDS
TTACGCCGAGATGTGAATTA+CGG 0.476050 5_1:+48446747 Msa0734430:CDS
TTTCCAGCGATAGCGCGGAT+TGG 0.477364 5_1:-48437184 None:intergenic
TTTCTTAACTCACCTTGTAA+AGG 0.478717 5_1:-48446781 None:intergenic
TACAAGATATCTTCGCTGGT+TGG 0.483415 5_1:+48443262 Msa0734430:CDS
GCTCTATGTTTCTGTGAAGA+TGG 0.484266 5_1:+48437156 Msa0734430:CDS
CATTTGAAGATATGATAACT+TGG 0.486436 5_1:+48445553 Msa0734430:CDS
TATTTGCCCACCACGTCCAC+TGG 0.487089 5_1:-48446227 None:intergenic
CAGACACCCTAGATGGCTCT+AGG 0.488550 5_1:-48442573 None:intergenic
TTGGAGAACTTGAGGGAGCT+GGG 0.488568 5_1:-48439716 None:intergenic
TCTGAATTTATGCTGACGTC+GGG 0.496498 5_1:-48438732 None:intergenic
TTGTTCTTCTGCATTGCTTG+GGG 0.498129 5_1:+48437225 Msa0734430:CDS
TTGGATGCAAGAAGGTGGTC+AGG 0.501888 5_1:+48445572 Msa0734430:CDS
CCTGCAACAAGTACGCGACT+TGG 0.502108 5_1:-48438546 None:intergenic
ACTCACCTTGTAAAGGACAT+TGG 0.503715 5_1:-48446774 None:intergenic
AACATAACCACTGTCATCTC+CGG 0.505169 5_1:-48439820 None:intergenic
GATGAATTTGGAGAACTTGA+GGG 0.507843 5_1:-48439723 None:intergenic
AAAACACTTCAACGTTGGTA+AGG 0.507923 5_1:+48443295 Msa0734430:CDS
ATTAAAGAAGCCCAATGAAA+AGG 0.512745 5_1:-48446707 None:intergenic
TACCCACTATTCCGTGATCT+GGG 0.513559 5_1:-48439777 None:intergenic
GACGAAGAACACGACGGAAA+CGG 0.515144 5_1:+48437100 Msa0734430:CDS
ACATACACTTCTGCATAGTC+AGG 0.517603 5_1:-48445942 None:intergenic
TAGTTTGGACACTGATACCG+AGG 0.525861 5_1:+48442744 Msa0734430:CDS
AACTTACAAGATATCTTCGC+TGG 0.526277 5_1:+48443258 Msa0734430:CDS
CCAACACCCCTATCAACAAA+AGG 0.533668 5_1:-48442670 None:intergenic
AGATGAATTTGGAGAACTTG+AGG 0.533944 5_1:-48439724 None:intergenic
CCTGACTAGCTCCGTGCTTG+AGG 0.534365 5_1:-48443723 None:intergenic
CAGAAACATAGAGCAATTCA+GGG 0.535845 5_1:-48437147 None:intergenic
AGATCACGGAATAGTGGGTA+TGG 0.539500 5_1:+48439780 Msa0734430:CDS
GCCGTTGCTGATCAGATGCT+GGG 0.539654 5_1:+48442936 Msa0734430:CDS
TGATCAGATGCTGGGTCCCA+AGG 0.542618 5_1:+48442944 Msa0734430:CDS
TGATCTGGCAGCTAGTTGGA+GGG 0.547032 5_1:+48438668 Msa0734430:CDS
GAGCATTGCAAGATGGTGCT+AGG 0.551672 5_1:+48438568 Msa0734430:CDS
AGGCATAGAGGCACGTAATG+AGG 0.551759 5_1:+48444834 Msa0734430:CDS
TTTCATCCTTCGGCTGTACG+CGG 0.555852 5_1:+48438705 Msa0734430:CDS
AATACAAAACACTTCAACGT+TGG 0.558740 5_1:+48443290 Msa0734430:CDS
AACAATGTCAGCACTGCGAA+AGG 0.559133 5_1:+48442630 Msa0734430:CDS
TCAGCACTGCGAAAGGAAGA+TGG 0.564714 5_1:+48442637 Msa0734430:CDS
AAAGATTTCCAGCGATAGCG+CGG 0.570884 5_1:-48437189 None:intergenic
TTCTGAATTTATGCTGACGT+CGG 0.571325 5_1:-48438733 None:intergenic
GGATGCCGTAATTCACATCT+CGG 0.573858 5_1:-48446752 None:intergenic
CCAACTAGCTGCCAGATCAA+AGG 0.574144 5_1:-48438664 None:intergenic
ATTGACATGGCCAGTGGACG+TGG 0.575757 5_1:+48446217 Msa0734430:CDS
TTTCGAGCTGACAATCCTGA+AGG 0.580736 5_1:+48444814 Msa0734430:CDS
GGCAGCAATTCATATTCCGC+CGG 0.582198 5_1:+48439801 Msa0734430:CDS
CTTCACATTGCTTCTAGCGA+CGG 0.584759 5_1:+48437038 Msa0734430:five_prime_UTR
ATCCCAGATCACGGAATAGT+GGG 0.585832 5_1:+48439775 Msa0734430:CDS
ACTTGTTAAATCTCTGTCAG+TGG 0.587981 5_1:+48442606 Msa0734430:CDS
CAGTATCGTCGCCTCAAGCA+CGG 0.589203 5_1:+48443712 Msa0734430:intron
CTTGTTAAATCTCTGTCAGT+GGG 0.592635 5_1:+48442607 Msa0734430:CDS
GCATCCCAATGTCCTTTACA+AGG 0.596920 5_1:+48446769 Msa0734430:CDS
ACCCAGCATCTGATCAGCAA+CGG 0.597212 5_1:-48442937 None:intergenic
CAATACCCTAGAGCCATCTA+GGG 0.598623 5_1:+48442567 Msa0734430:CDS
TCATCCTTCGGCTGTACGCG+GGG 0.600086 5_1:+48438707 Msa0734430:CDS
ATGATAACTTGGATGCAAGA+AGG 0.600170 5_1:+48445564 Msa0734430:CDS
GGTTTATGAGACGGTAGAAG+AGG 0.600611 5_1:+48446177 Msa0734430:intron
TGACAATCCTGAAGGCATAG+AGG 0.600699 5_1:+48444822 Msa0734430:CDS
ATGTTCCAATTAGGAGATGG+AGG 0.605793 5_1:+48442543 Msa0734430:intron
GCGAAAGGAAGATGGTCAGA+GGG 0.609079 5_1:+48442645 Msa0734430:CDS
GTTTATGAGACGGTAGAAGA+GGG 0.613100 5_1:+48446178 Msa0734430:CDS
TCGCTATAGGTGATTCTAAG+TGG 0.613714 5_1:+48447626 Msa0734430:CDS
GGACCCTCCTCAACAAAACA+AGG 0.614446 5_1:-48438525 None:intergenic
TAAACATTTAGCGATTGTCA+TGG 0.617261 5_1:+48442971 Msa0734430:CDS
TCGTGTAGCCAATTATGAGA+AGG 0.618596 5_1:+48446073 Msa0734430:CDS
TGCGAAAGGAAGATGGTCAG+AGG 0.619804 5_1:+48442644 Msa0734430:CDS
AGACACCCTAGATGGCTCTA+GGG 0.619922 5_1:-48442572 None:intergenic
ATGATGTAGACATGATTGAA+AGG 0.619961 5_1:+48445892 Msa0734430:CDS
AGAAGTTCAGACAGAAAGCG+AGG 0.629548 5_1:+48438752 Msa0734430:CDS
GTTGCAGGAGCATTGCAAGA+TGG 0.630620 5_1:+48438561 Msa0734430:CDS
TGACAGAGAATCCCAGATCA+CGG 0.634764 5_1:+48439766 Msa0734430:CDS
GGTACCCCGCGTACAGCCGA+AGG 0.635082 5_1:-48438711 None:intergenic
AAAATGATTGACATGGCCAG+TGG 0.637498 5_1:+48446211 Msa0734430:CDS
ACGTGAATCTGCGTCAATGT+GGG 0.638701 5_1:+48437371 Msa0734430:CDS
ATTGGCTGAAGGAAGATGCA+AGG 0.643465 5_1:+48445733 Msa0734430:CDS
TAGGTGAGTCTGCCAGCTCG+AGG 0.649671 5_1:+48443215 Msa0734430:intron
GACATGGCCAGTGGACGTGG+TGG 0.651270 5_1:+48446220 Msa0734430:CDS
AGCAATTCAGGGATTCGTAA+CGG 0.652895 5_1:-48437136 None:intergenic
ATATTGCTAGGTTTATGAGA+CGG 0.658635 5_1:+48446168 Msa0734430:intron
ATGCTGATGAAATTGGCTGA+AGG 0.659984 5_1:+48445722 Msa0734430:CDS
ATAACTTGGATGCAAGAAGG+TGG 0.670683 5_1:+48445567 Msa0734430:CDS
ACATGGCCAGTGGACGTGGT+GGG 0.683504 5_1:+48446221 Msa0734430:CDS
TATTCCGCCGGAGATGACAG+TGG 0.687762 5_1:+48439813 Msa0734430:CDS
ATAACCACTGTCATCTCCGG+CGG 0.696409 5_1:-48439817 None:intergenic
TCAGATGCTGGGTCCCAAGG+AGG 0.702698 5_1:+48442947 Msa0734430:CDS
AAATAGGTGACAGTTGACGA+CGG 0.705346 5_1:+48447586 Msa0734430:intron
AACGTGAATCTGCGTCAATG+TGG 0.708056 5_1:+48437370 Msa0734430:CDS
CTAGCGACGGTAACAAACCG+TGG 0.714268 5_1:+48437051 Msa0734430:five_prime_UTR
CGAAAGGAAGATGGTCAGAG+GGG 0.735126 5_1:+48442646 Msa0734430:CDS
ATTAGCGACGAAGAACACGA+CGG 0.765666 5_1:+48437094 Msa0734430:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATAAATAAAATTCTTGTT+CGG - chr5_1:48437737-48437756 None:intergenic 10.0%
!!! TCTGATAAAATATTTATTTT+TGG + chr5_1:48443045-48443064 Msa0734430:intron 10.0%
!! AAATTAGATTAAATACAAAT+GGG - chr5_1:48443149-48443168 None:intergenic 10.0%
!! TAAATTAGATTAAATACAAA+TGG - chr5_1:48443150-48443169 None:intergenic 10.0%
!!! TTAAATATTTGTTTTATTCT+TGG + chr5_1:48444709-48444728 Msa0734430:intron 10.0%
!!! ATAATGTTACTTTTAATTTT+TGG + chr5_1:48445420-48445439 Msa0734430:intron 10.0%
!! TTATTTAGGTAATATAAAAA+TGG + chr5_1:48445784-48445803 Msa0734430:intron 10.0%
!!! TATACTTTTAATAAATTTTC+TGG + chr5_1:48446111-48446130 Msa0734430:intron 10.0%
!!! ATACTTTTAATAAATTTTCT+GGG + chr5_1:48446112-48446131 Msa0734430:intron 10.0%
!!! TATTTTCAAACAAAAAATTA+TGG - chr5_1:48447077-48447096 None:intergenic 10.0%
!!! TGATAAATATGTCTTTAAAA+CGG + chr5_1:48439582-48439601 Msa0734430:intron 15.0%
!!! TTGACTTTTAGATTTTATAT+TGG + chr5_1:48439898-48439917 Msa0734430:intron 15.0%
!!! TGACTTTTAGATTTTATATT+GGG + chr5_1:48439899-48439918 Msa0734430:intron 15.0%
!! ACTTACTAATTATTATTTCA+TGG - chr5_1:48441915-48441934 None:intergenic 15.0%
!!! TTTAAAATTTTGATACATTG+AGG + chr5_1:48442021-48442040 Msa0734430:intron 15.0%
!!! TATTATTCCACTTTAATTTT+TGG + chr5_1:48442795-48442814 Msa0734430:intron 15.0%
!! AAATTGAGTTTCAAAAATAA+AGG + chr5_1:48443072-48443091 Msa0734430:intron 15.0%
!!! ATTTAGTGAATTAAAGTATT+AGG + chr5_1:48443165-48443184 Msa0734430:intron 15.0%
!! TGATATTATATTTATCTTCT+TGG - chr5_1:48444388-48444407 None:intergenic 15.0%
!! TAATGAAAAGTAGTAAATTA+AGG + chr5_1:48444628-48444647 Msa0734430:intron 15.0%
!!! AATAAACTACTTATCTTTTA+AGG + chr5_1:48444989-48445008 Msa0734430:intron 15.0%
!! TAAAGCAAACAAAAAAAAAA+AGG - chr5_1:48445029-48445048 None:intergenic 15.0%
!!! TTTTGTATTATAACATCAAT+TGG - chr5_1:48445165-48445184 None:intergenic 15.0%
!!! TGATTTTATTCTACAAAAAT+GGG - chr5_1:48445232-48445251 None:intergenic 15.0%
!!! TACTTTTAATTTTTGGTATT+TGG + chr5_1:48445427-48445446 Msa0734430:intron 15.0%
!!! TATGAATATTATTGATTGAT+TGG + chr5_1:48446421-48446440 Msa0734430:intron 15.0%
!! ATTATATAGACAATTAAACA+TGG + chr5_1:48446471-48446490 Msa0734430:intron 15.0%
!! TTATATAGACAATTAAACAT+GGG + chr5_1:48446472-48446491 Msa0734430:intron 15.0%
!!! TTGATAATTATACATTGTTA+TGG + chr5_1:48446537-48446556 Msa0734430:intron 15.0%
!!! TCTCAATGAATTTTTTTATA+TGG - chr5_1:48447365-48447384 None:intergenic 15.0%
!!! TTTGAAATGTTACAAAAATA+TGG - chr5_1:48447437-48447456 None:intergenic 15.0%
!! TACAAATAAACCAGTAAAAT+GGG - chr5_1:48437290-48437309 None:intergenic 20.0%
!! TGGTTTATTTGTAGTTTAAT+GGG + chr5_1:48437297-48437316 Msa0734430:intron 20.0%
!!! TTTCTTATTGTTGTTGTTTT+TGG + chr5_1:48437332-48437351 Msa0734430:intron 20.0%
!!! GTAATAATGTCTTTTAAGTT+TGG + chr5_1:48437424-48437443 Msa0734430:intron 20.0%
!!! AATCAATCTGTTTTCATATA+AGG + chr5_1:48437786-48437805 Msa0734430:intron 20.0%
!!! ATTTTGGTTTTAAATGTGTA+AGG + chr5_1:48438000-48438019 Msa0734430:intron 20.0%
!!! TATTTTACAAACATACGAAA+AGG - chr5_1:48438273-48438292 None:intergenic 20.0%
!!! ATGTTATTTTGTGGTTATAA+TGG + chr5_1:48438996-48439015 Msa0734430:intron 20.0%
!! TAGAAAACATGAAAAAGTAA+AGG - chr5_1:48439150-48439169 None:intergenic 20.0%
!! GAAGAGATTAAAATTGAAAT+TGG - chr5_1:48439333-48439352 None:intergenic 20.0%
!! TTTATCATAACTTCATAAGT+TGG - chr5_1:48439569-48439588 None:intergenic 20.0%
!! AGTTAAATATTTACAGTTTC+AGG - chr5_1:48439852-48439871 None:intergenic 20.0%
!! CTTGATAAGAATTTATAAAG+AGG + chr5_1:48440231-48440250 Msa0734430:intron 20.0%
!! TAAATACCATGTTGAAATTT+GGG - chr5_1:48440303-48440322 None:intergenic 20.0%
!! ATAAATACCATGTTGAAATT+TGG - chr5_1:48440304-48440323 None:intergenic 20.0%
!! ATTTCAACATGGTATTTATA+AGG + chr5_1:48440305-48440324 Msa0734430:intron 20.0%
!! ATGAAATTATACCTTAATTG+CGG - chr5_1:48440442-48440461 None:intergenic 20.0%
!! AACATCTATAATAGAAAAGA+TGG + chr5_1:48440587-48440606 Msa0734430:intron 20.0%
!!! GTTCCTTTTTAATTAGAATT+CGG - chr5_1:48440950-48440969 None:intergenic 20.0%
!! AATATCTATCTTAGAATTTG+TGG + chr5_1:48440980-48440999 Msa0734430:intron 20.0%
!! AACATCTATAATAGAAAAGA+TGG + chr5_1:48440587-48440606 Msa0734430:intron 20.0%
!!! GTTCCTTTTTAATTAGAATT+CGG - chr5_1:48440950-48440969 None:intergenic 20.0%
!! AATATCTATCTTAGAATTTG+TGG + chr5_1:48440980-48440999 Msa0734430:intron 20.0%
!!! TCATTTTACAACATTTAAGT+TGG - chr5_1:48442143-48442162 None:intergenic 20.0%
!! CTTAAATGTTGTAAAATGAA+TGG + chr5_1:48442144-48442163 Msa0734430:intron 20.0%
!!! TTACAAAATCTTCTAGTTTA+AGG + chr5_1:48442704-48442723 Msa0734430:CDS 20.0%
!! ATACCATAAAATGTTTGATT+TGG + chr5_1:48443098-48443117 Msa0734430:intron 20.0%
!!! AATTCAAACTACTTTTACTT+AGG + chr5_1:48443196-48443215 Msa0734430:intron 20.0%
!! TCATTAAAATATGCAAAGAA+AGG - chr5_1:48443449-48443468 None:intergenic 20.0%
!!! TGGAATTATTTGAAATAAGA+TGG - chr5_1:48443562-48443581 None:intergenic 20.0%
!! TTTCAAATAATTCCAAACAA+CGG + chr5_1:48443567-48443586 Msa0734430:intron 20.0%
!! CATTTATAAATATGAGACAT+GGG + chr5_1:48443844-48443863 Msa0734430:intron 20.0%
!! ATTTATAAATATGAGACATG+GGG + chr5_1:48443845-48443864 Msa0734430:intron 20.0%
!! TTGTAAAATATGTCAAATCT+AGG - chr5_1:48443928-48443947 None:intergenic 20.0%
!!! TTTTAACAAAATTAAGCTGA+AGG + chr5_1:48444000-48444019 Msa0734430:intron 20.0%
!! ATGGTAATAATGCTATAATA+TGG + chr5_1:48444312-48444331 Msa0734430:intron 20.0%
!!! ATCATTCAATCTAAATTTTC+AGG - chr5_1:48444552-48444571 None:intergenic 20.0%
!! ACTTGTTTGAATTAATTTAC+TGG - chr5_1:48444870-48444889 None:intergenic 20.0%
!!! TATTGATTTCTTACATAACT+TGG + chr5_1:48444909-48444928 Msa0734430:intron 20.0%
!!! ATATTGAGAACAAATCATTT+TGG + chr5_1:48445101-48445120 Msa0734430:intron 20.0%
!!! TATTGAGAACAAATCATTTT+GGG + chr5_1:48445102-48445121 Msa0734430:intron 20.0%
!!! CTGATTTTATTCTACAAAAA+TGG - chr5_1:48445233-48445252 None:intergenic 20.0%
!!! TCAATATGAATATTTTGGTT+GGG - chr5_1:48445381-48445400 None:intergenic 20.0%
!!! ATCAATATGAATATTTTGGT+TGG - chr5_1:48445382-48445401 None:intergenic 20.0%
!!! GGTAATCAATATGAATATTT+TGG - chr5_1:48445386-48445405 None:intergenic 20.0%
!! ACATTATATCAGTCTTAAAA+AGG - chr5_1:48445407-48445426 None:intergenic 20.0%
!!! TAAATTCTGAAGTTCAATTT+AGG + chr5_1:48445655-48445674 Msa0734430:intron 20.0%
!!! AAATGGTTTATGTAGTTTTA+AGG + chr5_1:48445801-48445820 Msa0734430:intron 20.0%
!! TTACATAAAAATGATTGACA+TGG + chr5_1:48446204-48446223 Msa0734430:CDS 20.0%
!!! AAACTTTATTTCCTTTTTCT+TGG - chr5_1:48446514-48446533 None:intergenic 20.0%
!!! TTTGGTCATTGTATAATTTT+TGG - chr5_1:48446599-48446618 None:intergenic 20.0%
!!! AGCATATCATAGATATTTTA+GGG - chr5_1:48446986-48447005 None:intergenic 20.0%
!!! TTTTGTAACATTTCAAAACT+TGG + chr5_1:48447440-48447459 Msa0734430:intron 20.0%
! CTACAAATAAACCAGTAAAA+TGG - chr5_1:48437291-48437310 None:intergenic 25.0%
! CTGGTTTATTTGTAGTTTAA+TGG + chr5_1:48437296-48437315 Msa0734430:intron 25.0%
!!! GTTTTTGGTTTAGATTTTGA+TGG + chr5_1:48437347-48437366 Msa0734430:intron 25.0%
!! ACATTATTACCATGATTTTG+TGG - chr5_1:48437414-48437433 None:intergenic 25.0%
! AAACATTTCATAAGCTATCT+TGG - chr5_1:48437598-48437617 None:intergenic 25.0%
!!! TGTTTTCATATAAGGTATTC+TGG + chr5_1:48437794-48437813 Msa0734430:intron 25.0%
! ACAAACAACATGTACATTTA+TGG + chr5_1:48438149-48438168 Msa0734430:intron 25.0%
! TTGACCAATAATAACTGTAT+TGG + chr5_1:48438378-48438397 Msa0734430:intron 25.0%
!!! TCTCATACTATGTTATTTTG+TGG + chr5_1:48438987-48439006 Msa0734430:intron 25.0%
!!! TTTCAATTTTAATCTCTTCG+TGG + chr5_1:48439334-48439353 Msa0734430:intron 25.0%
! AAGAAAAGTAGAACATATCA+AGG - chr5_1:48439535-48439554 None:intergenic 25.0%
!!! TTTTTTGTGAACCATTACTA+TGG + chr5_1:48439606-48439625 Msa0734430:intron 25.0%
! GATAAGAATTTATAAAGAGG+AGG + chr5_1:48440234-48440253 Msa0734430:intron 25.0%
! AAATACCATGTTGAAATTTG+GGG - chr5_1:48440302-48440321 None:intergenic 25.0%
! AAGGTATAATTTCATCAGAT+AGG + chr5_1:48440447-48440466 Msa0734430:intron 25.0%
! AATGACAATATTAGAGAGTT+AGG + chr5_1:48440562-48440581 Msa0734430:intron 25.0%
! ATGACAATATTAGAGAGTTA+GGG + chr5_1:48440563-48440582 Msa0734430:intron 25.0%
! ATCTATAATAGAAAAGATGG+TGG + chr5_1:48440590-48440609 Msa0734430:intron 25.0%
! TCTCCGAATTCTAATTAAAA+AGG + chr5_1:48440944-48440963 Msa0734430:intron 25.0%
! ATCTATAATAGAAAAGATGG+TGG + chr5_1:48440590-48440609 Msa0734430:intron 25.0%
! TCTCCGAATTCTAATTAAAA+AGG + chr5_1:48440944-48440963 Msa0734430:intron 25.0%
!!! TAACTACTTTTTACACATTC+AGG - chr5_1:48441824-48441843 None:intergenic 25.0%
! ACTAACAAAGTACAAAATCA+TGG - chr5_1:48441883-48441902 None:intergenic 25.0%
! TATACAAGAAAGAATCTAAC+AGG + chr5_1:48442208-48442227 Msa0734430:intron 25.0%
!! CAATCTTAAATACTCTAAAG+TGG + chr5_1:48442284-48442303 Msa0734430:intron 25.0%
! AAAAAAGAAAGTAAGCTAGT+AGG + chr5_1:48442470-48442489 Msa0734430:intron 25.0%
!! CTAGAAGATTTTGTAATTCT+TGG - chr5_1:48442700-48442719 None:intergenic 25.0%
! ATTTACTGTTGATCTTAGTT+TGG + chr5_1:48442729-48442748 Msa0734430:CDS 25.0%
! GAAATCAATTATACAAACCT+CGG - chr5_1:48442764-48442783 None:intergenic 25.0%
! GTGGAATAATAAAACAAAAG+TGG - chr5_1:48442786-48442805 None:intergenic 25.0%
!!! TATTCCACTTTAATTTTTGG+TGG + chr5_1:48442798-48442817 Msa0734430:intron 25.0%
!! TCATAACTAGTTATTTCACA+AGG - chr5_1:48443007-48443026 None:intergenic 25.0%
!! CTTCCAAATCAAACATTTTA+TGG - chr5_1:48443104-48443123 None:intergenic 25.0%
! TTGATTCTTCTTTGTAATGA+AGG + chr5_1:48443335-48443354 Msa0734430:intron 25.0%
!!! TGCATATTTTAATGATGCAA+TGG + chr5_1:48443454-48443473 Msa0734430:intron 25.0%
! GAAATAAGATGGAATGAAAT+GGG - chr5_1:48443551-48443570 None:intergenic 25.0%
! TGAAATAAGATGGAATGAAA+TGG - chr5_1:48443552-48443571 None:intergenic 25.0%
! AAATGGAATGAAATCATTGA+AGG - chr5_1:48443595-48443614 None:intergenic 25.0%
! CTTAATGGAAATGAATCAAT+AGG + chr5_1:48443750-48443769 Msa0734430:intron 25.0%
! CCATGTCTCATATTTATAAA+TGG - chr5_1:48443846-48443865 None:intergenic 25.0%
! CCATTTATAAATATGAGACA+TGG + chr5_1:48443843-48443862 Msa0734430:intron 25.0%
!! TGACATATTTTACAACCAAA+TGG + chr5_1:48443933-48443952 Msa0734430:intron 25.0%
!! TTTTACAACCAAATGGAATA+TGG + chr5_1:48443940-48443959 Msa0734430:intron 25.0%
!! TTGATAGTAACTTGATACTA+AGG + chr5_1:48444216-48444235 Msa0734430:intron 25.0%
!! TTTCCTATTTGTTTAGGATT+AGG - chr5_1:48444278-48444297 None:intergenic 25.0%
! ATAATATGGAATCTAATCCT+AGG + chr5_1:48444326-48444345 Msa0734430:intron 25.0%
! GACACTCTTAAGATTATAAA+TGG + chr5_1:48444360-48444379 Msa0734430:intron 25.0%
!! ACTTGATTGCTTAAGTTTTT+AGG - chr5_1:48444509-48444528 None:intergenic 25.0%
! TGGAATCATGATATTAAAGT+TGG + chr5_1:48444729-48444748 Msa0734430:intron 25.0%
! TACTGATATCATTTATCGAA+TGG + chr5_1:48445191-48445210 Msa0734430:intron 25.0%
!!! AAATGCTCTATTTCTAACAT+TGG + chr5_1:48445306-48445325 Msa0734430:intron 25.0%
! TTTATCTTGAATGATCTTGT+TGG + chr5_1:48445329-48445348 Msa0734430:intron 25.0%
! CATTTGAAGATATGATAACT+TGG + chr5_1:48445553-48445572 Msa0734430:CDS 25.0%
! AATTTATGCAGAGAACTTAA+AGG - chr5_1:48445641-48445660 None:intergenic 25.0%
! AAGAAATATGCTGATGAAAT+TGG + chr5_1:48445715-48445734 Msa0734430:CDS 25.0%
! TCTAAAAAACAACTAGAGTA+TGG - chr5_1:48446357-48446376 None:intergenic 25.0%
! ATAAATGATAGCCAAGAAAA+AGG + chr5_1:48446500-48446519 Msa0734430:intron 25.0%
! AATTATACAATGACCAAAAG+TGG + chr5_1:48446601-48446620 Msa0734430:intron 25.0%
! AATATCATACAGCTTAAGTT+GGG + chr5_1:48446663-48446682 Msa0734430:intron 25.0%
! AGATATTTGGAAGAGTAAAT+TGG + chr5_1:48446830-48446849 Msa0734430:intron 25.0%
! GATATTTGGAAGAGTAAATT+GGG + chr5_1:48446831-48446850 Msa0734430:intron 25.0%
!!! GCATATCATAGATATTTTAG+GGG - chr5_1:48446985-48447004 None:intergenic 25.0%
!! GAGCATATCATAGATATTTT+AGG - chr5_1:48446987-48447006 None:intergenic 25.0%
! TGACATTGTAATTTCAAACA+GGG - chr5_1:48447009-48447028 None:intergenic 25.0%
! ATGACATTGTAATTTCAAAC+AGG - chr5_1:48447010-48447029 None:intergenic 25.0%
! TTCAAACAAAAAATTATGGC+AGG - chr5_1:48447073-48447092 None:intergenic 25.0%
! AGAAACATTGTTCAACAATT+TGG - chr5_1:48447235-48447254 None:intergenic 25.0%
!! TTTTATATGGAGTTACATCT+TGG - chr5_1:48447352-48447371 None:intergenic 25.0%
!! AATGGTCATTGGTTAAAAAT+AGG + chr5_1:48447570-48447589 Msa0734430:intron 25.0%
!! TTTGTTGTTCCACAAAATCA+TGG + chr5_1:48437402-48437421 Msa0734430:CDS 30.0%
AAAGTTTCTCTCGTTTCATA+GGG - chr5_1:48437946-48437965 None:intergenic 30.0%
AAAAGTTTCTCTCGTTTCAT+AGG - chr5_1:48437947-48437966 None:intergenic 30.0%
! TGTACATGTTGTTTGTCATT+TGG - chr5_1:48438145-48438164 None:intergenic 30.0%
! ACTATTTTCTGTTTATGCAC+CGG - chr5_1:48438328-48438347 None:intergenic 30.0%
GATGCCAATACAGTTATTAT+TGG - chr5_1:48438385-48438404 None:intergenic 30.0%
TCAAACAAAATCAACACATC+AGG - chr5_1:48438449-48438468 None:intergenic 30.0%
TTTGAGAATTTCAGAAGCTT+TGG + chr5_1:48438464-48438483 Msa0734430:intron 30.0%
!!! AATTCTCATCTTTTGGCTTT+AGG - chr5_1:48438503-48438522 None:intergenic 30.0%
!! GTTTAAGCTTGATAATGATC+AGG + chr5_1:48438599-48438618 Msa0734430:CDS 30.0%
TGTAGAAAAAAGACTTACTC+TGG + chr5_1:48438835-48438854 Msa0734430:intron 30.0%
! ATTTTCCCATGAAGTTGTAT+TGG + chr5_1:48439262-48439281 Msa0734430:intron 30.0%
! TCTAATCTGATAGTGCAAAA+TGG + chr5_1:48439383-48439402 Msa0734430:intron 30.0%
GTGCAAAATGGTTATTATCA+AGG + chr5_1:48439395-48439414 Msa0734430:intron 30.0%
TGGTATTTATAAGGATGAGT+TGG + chr5_1:48440314-48440333 Msa0734430:intron 30.0%
GGTATTTATAAGGATGAGTT+GGG + chr5_1:48440315-48440334 Msa0734430:intron 30.0%
TAATTGCGGTGTATAAGTTT+GGG - chr5_1:48440403-48440422 None:intergenic 30.0%
GTATAATTTCATCAGATAGG+CGG + chr5_1:48440450-48440469 Msa0734430:intron 30.0%
!!! TGCTTATTTTATTCTCGTGT+TGG - chr5_1:48440483-48440502 None:intergenic 30.0%
CGAGAATAAAATAAGCATAG+TGG + chr5_1:48440486-48440505 Msa0734430:intron 30.0%
!! TAGAAAAGATGGTGGAAAAT+AGG + chr5_1:48440598-48440617 Msa0734430:intron 30.0%
GACTTGTAGATTATGTAGTA+CGG + chr5_1:48440649-48440668 Msa0734430:intron 30.0%
! ATCTCTCTTGTAGTTTTTCT+AGG - chr5_1:48440721-48440740 None:intergenic 30.0%
AAATTAGGGTCAGTACTTTA+TGG - chr5_1:48440909-48440928 None:intergenic 30.0%
TCTATCTTAGAATTTGTGGT+TGG + chr5_1:48440984-48441003 Msa0734430:intron 30.0%
CTATCTTAGAATTTGTGGTT+GGG + chr5_1:48440985-48441004 Msa0734430:intron 30.0%
TGAACAAGTGTTTATAAGTG+GGG - chr5_1:48441054-48441073 None:intergenic 30.0%
CTGAACAAGTGTTTATAAGT+GGG - chr5_1:48441055-48441074 None:intergenic 30.0%
!! TAGAAAAGATGGTGGAAAAT+AGG + chr5_1:48440598-48440617 Msa0734430:intron 30.0%
GACTTGTAGATTATGTAGTA+CGG + chr5_1:48440649-48440668 Msa0734430:intron 30.0%
! ATCTCTCTTGTAGTTTTTCT+AGG - chr5_1:48440721-48440740 None:intergenic 30.0%
AAATTAGGGTCAGTACTTTA+TGG - chr5_1:48440909-48440928 None:intergenic 30.0%
TCTATCTTAGAATTTGTGGT+TGG + chr5_1:48440984-48441003 Msa0734430:intron 30.0%
CTATCTTAGAATTTGTGGTT+GGG + chr5_1:48440985-48441004 Msa0734430:intron 30.0%
TGAACAAGTGTTTATAAGTG+GGG - chr5_1:48441054-48441073 None:intergenic 30.0%
CTGAACAAGTGTTTATAAGT+GGG - chr5_1:48441055-48441074 None:intergenic 30.0%
AAAATGACTATTACCGCTAT+GGG - chr5_1:48441797-48441816 None:intergenic 30.0%
TCTAGACATTTGATACATGT+GGG - chr5_1:48442059-48442078 None:intergenic 30.0%
ATCTAGACATTTGATACATG+TGG - chr5_1:48442060-48442079 None:intergenic 30.0%
ATGTTGTAAAATGAATGGCT+TGG + chr5_1:48442149-48442168 Msa0734430:intron 30.0%
AGAAAGAATCTAACAGGAAA+AGG + chr5_1:48442214-48442233 Msa0734430:intron 30.0%
TCAACATAGCGAATTAGATA+TGG - chr5_1:48442524-48442543 None:intergenic 30.0%
TAGTCCACCAAAAATTAAAG+TGG - chr5_1:48442805-48442824 None:intergenic 30.0%
AAACAACCACAATTAACGTT+TGG - chr5_1:48442841-48442860 None:intergenic 30.0%
AATTCTATCCGGAAAAAAGA+GGG - chr5_1:48442881-48442900 None:intergenic 30.0%
TAAACATTTAGCGATTGTCA+TGG + chr5_1:48442971-48442990 Msa0734430:CDS 30.0%
AATACAAAACACTTCAACGT+TGG + chr5_1:48443290-48443309 Msa0734430:CDS 30.0%
TTTGTAATGAAGGTTATGTC+TGG + chr5_1:48443345-48443364 Msa0734430:intron 30.0%
AAATGAGATAGAATGAAGAG+TGG + chr5_1:48443393-48443412 Msa0734430:intron 30.0%
AAGAGTGGAATAGAACATAA+TGG + chr5_1:48443408-48443427 Msa0734430:intron 30.0%
TCATTCTATTCCACCTAAAA+TGG + chr5_1:48443493-48443512 Msa0734430:intron 30.0%
TTCGGATTAATGGAAGTAAA+TGG - chr5_1:48443612-48443631 None:intergenic 30.0%
TATATTTCCAATCTTCCACT+AGG - chr5_1:48443655-48443674 None:intergenic 30.0%
ATAGGAATGGAATCTGTATA+TGG - chr5_1:48443809-48443828 None:intergenic 30.0%
TATAAATGGTGCAAATCTGA+CGG - chr5_1:48443832-48443851 None:intergenic 30.0%
! TGTAGTTCTGTGACTAAAAT+GGG + chr5_1:48443963-48443982 Msa0734430:intron 30.0%
AACAAAATTAAGCTGAAGGT+TGG + chr5_1:48444004-48444023 Msa0734430:intron 30.0%
!! GAAGGTTGGTAGAATAAAAA+TGG + chr5_1:48444018-48444037 Msa0734430:intron 30.0%
! TGGTTTGAATTTAAAGTGCT+AGG + chr5_1:48444038-48444057 Msa0734430:intron 30.0%
TCAATAACTGTTGTCTTTCT+CGG - chr5_1:48444075-48444094 None:intergenic 30.0%
TATATAGCACAACAATCACA+AGG - chr5_1:48444162-48444181 None:intergenic 30.0%
GAGTCTCGTATACTATAAAT+AGG - chr5_1:48444256-48444275 None:intergenic 30.0%
ACTCCTAATCCTAAACAAAT+AGG + chr5_1:48444272-48444291 Msa0734430:intron 30.0%
TCTGAGTTTCCTATTTGTTT+AGG - chr5_1:48444284-48444303 None:intergenic 30.0%
AGTGTCTTAAATTATCTCCT+AGG - chr5_1:48444346-48444365 None:intergenic 30.0%
AATCACGATTCATAGAATCA+CGG + chr5_1:48444470-48444489 Msa0734430:intron 30.0%
! GAATGATTTGCATTACACAA+TGG + chr5_1:48444565-48444584 Msa0734430:intron 30.0%
GTTTGAATTAATTTACTGGC+CGG - chr5_1:48444866-48444885 None:intergenic 30.0%
TCTCAATATATTCAGATCGT+TGG - chr5_1:48445090-48445109 None:intergenic 30.0%
CTACAAAAATGGGTCATAAA+TGG - chr5_1:48445222-48445241 None:intergenic 30.0%
AAAATCATGTACACAGAGAA+AGG - chr5_1:48445493-48445512 None:intergenic 30.0%
!! TTCTGAAGTTCAATTTAGGT+TGG + chr5_1:48445659-48445678 Msa0734430:intron 30.0%
! TCTGAAGTTCAATTTAGGTT+GGG + chr5_1:48445660-48445679 Msa0734430:intron 30.0%
! ATAGCTAGCTACTGTTATTT+AGG + chr5_1:48445770-48445789 Msa0734430:intron 30.0%
AATCTGCAATAACAATGCAA+AGG - chr5_1:48445850-48445869 None:intergenic 30.0%
GTTATTGCAGATTATCTTTC+TGG + chr5_1:48445857-48445876 Msa0734430:intron 30.0%
ATGATGTAGACATGATTGAA+AGG + chr5_1:48445892-48445911 Msa0734430:CDS 30.0%
!!! ACAATTAGCTTTTCTTTTGC+AGG + chr5_1:48446015-48446034 Msa0734430:intron 30.0%
AAGAATTGCCTTCTCATAAT+TGG - chr5_1:48446084-48446103 None:intergenic 30.0%
ATATTGCTAGGTTTATGAGA+CGG + chr5_1:48446168-48446187 Msa0734430:intron 30.0%
CACACAAATCACATAATTGT+AGG - chr5_1:48446266-48446285 None:intergenic 30.0%
! AGACATGCATATTTTGTTAC+TGG - chr5_1:48446329-48446348 None:intergenic 30.0%
ATACATTGTTATGGACCTTA+TGG + chr5_1:48446546-48446565 Msa0734430:intron 30.0%
!! GGTCATTGTATAATTTTTGG+AGG - chr5_1:48446596-48446615 None:intergenic 30.0%
ATGATATTCAAATGCAGATG+AGG - chr5_1:48446651-48446670 None:intergenic 30.0%
GAATATCATACAGCTTAAGT+TGG + chr5_1:48446662-48446681 Msa0734430:intron 30.0%
! ATAGATCAGACCTTTTCATT+GGG + chr5_1:48446697-48446716 Msa0734430:intron 30.0%
ATTAAAGAAGCCCAATGAAA+AGG - chr5_1:48446710-48446729 None:intergenic 30.0%
TTTCTTAACTCACCTTGTAA+AGG - chr5_1:48446784-48446803 None:intergenic 30.0%
ACTTTCCTTATCAACAACAA+AGG + chr5_1:48446807-48446826 Msa0734430:intron 30.0%
!! TATCTCCTTTGTTGTTGATA+AGG - chr5_1:48446815-48446834 None:intergenic 30.0%
TCAACAACAAAGGAGATATT+TGG + chr5_1:48446817-48446836 Msa0734430:intron 30.0%
TAAATTGGGATAATTCTGCT+TGG + chr5_1:48446845-48446864 Msa0734430:intron 30.0%
!! ACTAGTCTTATGTATCTCTT+TGG + chr5_1:48446870-48446889 Msa0734430:intron 30.0%
!! CTAGTCTTATGTATCTCTTT+GGG + chr5_1:48446871-48446890 Msa0734430:intron 30.0%
!! ATAGATATTTTAGGGGAAAG+AGG - chr5_1:48446978-48446997 None:intergenic 30.0%
TGAAATTACAATGTCATCCT+TGG + chr5_1:48447013-48447032 Msa0734430:intron 30.0%
!! AAACTTTTTGGTGATAGAGA+TGG - chr5_1:48447045-48447064 None:intergenic 30.0%
! TCTCTATCACCAAAAAGTTT+TGG + chr5_1:48447045-48447064 Msa0734430:intron 30.0%
AATTTACTAAACCAACCTCT+AGG + chr5_1:48447256-48447275 Msa0734430:intron 30.0%
AAAATTCATTGAGATCACCA+TGG + chr5_1:48447371-48447390 Msa0734430:intron 30.0%
TACATTCGTCATATCAACTT+TGG + chr5_1:48447399-48447418 Msa0734430:intron 30.0%
AACCGTGGCTAAAAACAAAA+TGG + chr5_1:48437066-48437085 Msa0734430:exon 35.0%
!!! TGCCATTTTGTTTTTAGCCA+CGG - chr5_1:48437071-48437090 None:intergenic 35.0%
CAGAAACATAGAGCAATTCA+GGG - chr5_1:48437150-48437169 None:intergenic 35.0%
ACAGAAACATAGAGCAATTC+AGG - chr5_1:48437151-48437170 None:intergenic 35.0%
! TTTTGTTCTTCTGCATTGCT+TGG + chr5_1:48437223-48437242 Msa0734430:CDS 35.0%
TTTGTTCTTCTGCATTGCTT+GGG + chr5_1:48437224-48437243 Msa0734430:CDS 35.0%
!! TTGATTCGTACCCATTTTAC+TGG + chr5_1:48437277-48437296 Msa0734430:intron 35.0%
! AAGGTATTCTGGAAAACTTG+TGG + chr5_1:48437805-48437824 Msa0734430:intron 35.0%
!! GGTAAGTTGAAGAGTTTTCA+CGG + chr5_1:48437829-48437848 Msa0734430:intron 35.0%
! TAAGCACTAAGCAGTCATTT+TGG + chr5_1:48437984-48438003 Msa0734430:intron 35.0%
! ACATGTTGTTTGTCATTTGG+TGG - chr5_1:48438142-48438161 None:intergenic 35.0%
! TAAGAAGAAGCTTTAATGCC+AGG + chr5_1:48438409-48438428 Msa0734430:intron 35.0%
! CAAGGTGAATTCTCATCTTT+TGG - chr5_1:48438510-48438529 None:intergenic 35.0%
!!! GAATTCACCTTGTTTTGTTG+AGG + chr5_1:48438518-48438537 Msa0734430:CDS 35.0%
CAAAGTTTCTTCCTTTGATC+TGG + chr5_1:48438653-48438672 Msa0734430:CDS 35.0%
TAAGGAGAACTTTCATCCTT+CGG + chr5_1:48438695-48438714 Msa0734430:CDS 35.0%
TTCTGAATTTATGCTGACGT+CGG - chr5_1:48438736-48438755 None:intergenic 35.0%
!!! TTTTTTCTACAGCTACCAGA+AGG - chr5_1:48438826-48438845 None:intergenic 35.0%
ATAACATGAATCAGCCTAAC+AGG + chr5_1:48439095-48439114 Msa0734430:intron 35.0%
GCACAGCAACAAAAAGTAAT+TGG - chr5_1:48439234-48439253 None:intergenic 35.0%
AAAATAAAGTGTGAGCCATG+AGG - chr5_1:48439633-48439652 None:intergenic 35.0%
GATGAATTTGGAGAACTTGA+GGG - chr5_1:48439726-48439745 None:intergenic 35.0%
AGATGAATTTGGAGAACTTG+AGG - chr5_1:48439727-48439746 None:intergenic 35.0%
GCATATACAGCAGATGAATT+TGG - chr5_1:48439738-48439757 None:intergenic 35.0%
!! TCAATGGGTTGGGTTTAAAA+GGG - chr5_1:48440034-48440053 None:intergenic 35.0%
!! TTCAATGGGTTGGGTTTAAA+AGG - chr5_1:48440035-48440054 None:intergenic 35.0%
! TTTTAAACCCAACCCATTGA+AGG + chr5_1:48440034-48440053 Msa0734430:intron 35.0%
GCAACTCAAATGTCACAATT+GGG - chr5_1:48440143-48440162 None:intergenic 35.0%
CTAACCCATCCTTATAAAAC+CGG - chr5_1:48440278-48440297 None:intergenic 35.0%
TAATTGCGGTGTAGAAGTTT+GGG - chr5_1:48440342-48440361 None:intergenic 35.0%
GTCCTAACTCATCCTTAAAA+CGG - chr5_1:48440381-48440400 None:intergenic 35.0%
CTAATTGCGGTGTATAAGTT+TGG - chr5_1:48440404-48440423 None:intergenic 35.0%
ACTTATACACCGCAATTAGT+CGG + chr5_1:48440405-48440424 Msa0734430:intron 35.0%
! AAATAAGCATAGTGGAGATG+AGG + chr5_1:48440494-48440513 Msa0734430:intron 35.0%
! AATAAGCATAGTGGAGATGA+GGG + chr5_1:48440495-48440514 Msa0734430:intron 35.0%
!! AGATGGTGGAAAATAGGTTT+AGG + chr5_1:48440604-48440623 Msa0734430:intron 35.0%
GAAAATAGGTTTAGGTGGTT+TGG + chr5_1:48440612-48440631 Msa0734430:intron 35.0%
! TTTAGGTGGTTTGGACATAT+AGG + chr5_1:48440621-48440640 Msa0734430:intron 35.0%
! TTAGGTGGTTTGGACATATA+GGG + chr5_1:48440622-48440641 Msa0734430:intron 35.0%
AGATCTAGAGATGAATGAGT+TGG + chr5_1:48440750-48440769 Msa0734430:intron 35.0%
! GAATGAGTTGGATCGAAATA+TGG + chr5_1:48440762-48440781 Msa0734430:intron 35.0%
GAACAAGTGTTTATAAGTGG+GGG - chr5_1:48441053-48441072 None:intergenic 35.0%
CCTGAACAAGTGTTTATAAG+TGG - chr5_1:48441056-48441075 None:intergenic 35.0%
CCACTTATAAACACTTGTTC+AGG + chr5_1:48441053-48441072 Msa0734430:intron 35.0%
!! AGATGGTGGAAAATAGGTTT+AGG + chr5_1:48440604-48440623 Msa0734430:intron 35.0%
GAAAATAGGTTTAGGTGGTT+TGG + chr5_1:48440612-48440631 Msa0734430:intron 35.0%
! TTTAGGTGGTTTGGACATAT+AGG + chr5_1:48440621-48440640 Msa0734430:intron 35.0%
! TTAGGTGGTTTGGACATATA+GGG + chr5_1:48440622-48440641 Msa0734430:intron 35.0%
AGATCTAGAGATGAATGAGT+TGG + chr5_1:48440750-48440769 Msa0734430:intron 35.0%
! GAATGAGTTGGATCGAAATA+TGG + chr5_1:48440762-48440781 Msa0734430:intron 35.0%
GAACAAGTGTTTATAAGTGG+GGG - chr5_1:48441053-48441072 None:intergenic 35.0%
CCTGAACAAGTGTTTATAAG+TGG - chr5_1:48441056-48441075 None:intergenic 35.0%
CCACTTATAAACACTTGTTC+AGG + chr5_1:48441053-48441072 Msa0734430:intron 35.0%
CAAAATGACTATTACCGCTA+TGG - chr5_1:48441798-48441817 None:intergenic 35.0%
! CATAGCGGTAATAGTCATTT+TGG + chr5_1:48441796-48441815 Msa0734430:intron 35.0%
CTAGACATTTGATACATGTG+GGG - chr5_1:48442058-48442077 None:intergenic 35.0%
AACAGGAAAAGGAAAACACA+AGG + chr5_1:48442225-48442244 Msa0734430:intron 35.0%
ATGCAAAATACCACTACTTG+AGG + chr5_1:48442439-48442458 Msa0734430:intron 35.0%
GCTATGTTGATGTTCCAATT+AGG + chr5_1:48442534-48442553 Msa0734430:intron 35.0%
TTGATGTTCCAATTAGGAGA+TGG + chr5_1:48442540-48442559 Msa0734430:intron 35.0%
! ACTTGTTAAATCTCTGTCAG+TGG + chr5_1:48442606-48442625 Msa0734430:CDS 35.0%
CTTGTTAAATCTCTGTCAGT+GGG + chr5_1:48442607-48442626 Msa0734430:CDS 35.0%
TTGCTTCCAAACGTTAATTG+TGG + chr5_1:48442832-48442851 Msa0734430:intron 35.0%
ATTCTATCCGGAAAAAAGAG+GGG - chr5_1:48442880-48442899 None:intergenic 35.0%
GAATTCTATCCGGAAAAAAG+AGG - chr5_1:48442882-48442901 None:intergenic 35.0%
TGCTGGAAATGAATTCTATC+CGG - chr5_1:48442892-48442911 None:intergenic 35.0%
GCTAAATGTTTATCCTCCTT+GGG - chr5_1:48442963-48442982 None:intergenic 35.0%
!! ATGTTTGATTTGGAAGTACC+TGG + chr5_1:48443108-48443127 Msa0734430:intron 35.0%
AACTTACAAGATATCTTCGC+TGG + chr5_1:48443258-48443277 Msa0734430:CDS 35.0%
AAAACACTTCAACGTTGGTA+AGG + chr5_1:48443295-48443314 Msa0734430:CDS 35.0%
GGTTATGTCTGGATATCTAA+TGG + chr5_1:48443356-48443375 Msa0734430:intron 35.0%
TTCTATTCCACCTAAAATGG+AGG + chr5_1:48443496-48443515 Msa0734430:intron 35.0%
TCTATTCCACCTAAAATGGA+GGG + chr5_1:48443497-48443516 Msa0734430:intron 35.0%
TTGGACTACATTCGGATTAA+TGG - chr5_1:48443622-48443641 None:intergenic 35.0%
CAAGACTATTGGACTACATT+CGG - chr5_1:48443630-48443649 None:intergenic 35.0%
AGCTAGTCAGGTAAACTTAA+TGG + chr5_1:48443735-48443754 Msa0734430:intron 35.0%
GAACTACACCATATTCCATT+TGG - chr5_1:48443951-48443970 None:intergenic 35.0%
! GTGTAGTTCTGTGACTAAAA+TGG + chr5_1:48443962-48443981 Msa0734430:intron 35.0%
AGAGCAACGGTTGTAATTAT+TGG + chr5_1:48444123-48444142 Msa0734430:intron 35.0%
GGAAACTCAGAAAACAATCA+TGG + chr5_1:48444293-48444312 Msa0734430:intron 35.0%
ACTACATCAACTGATCACTA+TGG + chr5_1:48444674-48444693 Msa0734430:intron 35.0%
CTACATCAACTGATCACTAT+GGG + chr5_1:48444675-48444694 Msa0734430:intron 35.0%
ATGATAACTTGGATGCAAGA+AGG + chr5_1:48445564-48445583 Msa0734430:CDS 35.0%
TCAGGTAAATTCATTCTTGC+TGG + chr5_1:48445590-48445609 Msa0734430:intron 35.0%
CAGGTAAATTCATTCTTGCT+GGG + chr5_1:48445591-48445610 Msa0734430:intron 35.0%
! GCTGATTTCATCATATTGCT+AGG + chr5_1:48446156-48446175 Msa0734430:intron 35.0%
GTGTTGTACATATCACCATA+AGG - chr5_1:48446564-48446583 None:intergenic 35.0%
GGTGATATGTACAACACAAA+AGG + chr5_1:48446567-48446586 Msa0734430:intron 35.0%
GGTCTGATCTATGAAAACAA+GGG - chr5_1:48446689-48446708 None:intergenic 35.0%
AGGTCTGATCTATGAAAACA+AGG - chr5_1:48446690-48446709 None:intergenic 35.0%
! CATAGATCAGACCTTTTCAT+TGG + chr5_1:48446696-48446715 Msa0734430:intron 35.0%
! TATCTCTTTGGGTTTGATAG+TGG + chr5_1:48446882-48446901 Msa0734430:intron 35.0%
CAAGATTCTACCAAATCATG+GGG - chr5_1:48446910-48446929 None:intergenic 35.0%
CCAAGATTCTACCAAATCAT+GGG - chr5_1:48446911-48446930 None:intergenic 35.0%
TTTGGTAGAATCTTGGCATT+AGG + chr5_1:48446915-48446934 Msa0734430:intron 35.0%
ATCTTGGCATTAGGATTCAT+AGG + chr5_1:48446924-48446943 Msa0734430:intron 35.0%
AGGTACATGATGTGTTTACT+CGG - chr5_1:48447168-48447187 None:intergenic 35.0%
ACATCATGTACCTACCTAAA+TGG + chr5_1:48447175-48447194 Msa0734430:intron 35.0%
CAATTTGGTATGACTTGAAG+TGG - chr5_1:48447220-48447239 None:intergenic 35.0%
TGAGGCCATTTAAAGATATG+TGG + chr5_1:48447285-48447304 Msa0734430:intron 35.0%
CGCATCCACATATCTTTAAA+TGG - chr5_1:48447293-48447312 None:intergenic 35.0%
ATGATAGAGGCCAAGTATTA+GGG + chr5_1:48447532-48447551 Msa0734430:intron 35.0%
AGCAATTCAGGGATTCGTAA+CGG - chr5_1:48437139-48437158 None:intergenic 40.0%
! GCTCTATGTTTCTGTGAAGA+TGG + chr5_1:48437156-48437175 Msa0734430:CDS 40.0%
GCAGAAGAACAAAAAACGTG+AGG - chr5_1:48437217-48437236 None:intergenic 40.0%
TTGTTCTTCTGCATTGCTTG+GGG + chr5_1:48437225-48437244 Msa0734430:CDS 40.0%
TTTGCATTTGCGAGACTGTT+TGG + chr5_1:48437507-48437526 Msa0734430:intron 40.0%
TTGCATTTGCGAGACTGTTT+GGG + chr5_1:48437508-48437527 Msa0734430:intron 40.0%
! GTATTCTGGAAAACTTGTGG+AGG + chr5_1:48437808-48437827 Msa0734430:intron 40.0%
AAGCACTTGTCAGACTCTTT+GGG - chr5_1:48437884-48437903 None:intergenic 40.0%
TAAGCACTTGTCAGACTCTT+TGG - chr5_1:48437885-48437904 None:intergenic 40.0%
TTTCTCTCGTTTCATAGGGT+CGG - chr5_1:48437942-48437961 None:intergenic 40.0%
CCACACATTCAGAGACTATA+TGG - chr5_1:48438041-48438060 None:intergenic 40.0%
CCATATAGTCTCTGAATGTG+TGG + chr5_1:48438038-48438057 Msa0734430:intron 40.0%
CCACTAACAGAAGACACATT+CGG - chr5_1:48438081-48438100 None:intergenic 40.0%
TCTTCCAAGCATTATTTCGC+CGG + chr5_1:48438306-48438325 Msa0734430:intron 40.0%
CAGGTTACAAAATGAAGTCC+TGG - chr5_1:48438430-48438449 None:intergenic 40.0%
!!! TCTCATCTTTTGGCTTTAGG+AGG - chr5_1:48438500-48438519 None:intergenic 40.0%
!!! TTCACCTTGTTTTGTTGAGG+AGG + chr5_1:48438521-48438540 Msa0734430:CDS 40.0%
!!! TCACCTTGTTTTGTTGAGGA+GGG + chr5_1:48438522-48438541 Msa0734430:CDS 40.0%
TCTGAATTTATGCTGACGTC+GGG - chr5_1:48438735-48438754 None:intergenic 40.0%
GTGAACAAGATGAAGCAAAC+TGG - chr5_1:48438792-48438811 None:intergenic 40.0%
! TCACCACATTGTTTTCCTTC+TGG + chr5_1:48438808-48438827 Msa0734430:intron 40.0%
CTACCAGAAGGAAAACAATG+TGG - chr5_1:48438814-48438833 None:intergenic 40.0%
TGAAATGCAAGTCACCTGTT+AGG - chr5_1:48439112-48439131 None:intergenic 40.0%
ACAAGTTGTTGTGGATGACA+TGG - chr5_1:48439485-48439504 None:intergenic 40.0%
GATTGGACTACAAGTTGTTG+TGG - chr5_1:48439494-48439513 None:intergenic 40.0%
GTCCAATCATGCATCTTAAC+TGG + chr5_1:48439506-48439525 Msa0734430:intron 40.0%
CACCAGTTAAGATGCATGAT+TGG - chr5_1:48439511-48439530 None:intergenic 40.0%
CAATCATGCATCTTAACTGG+TGG + chr5_1:48439509-48439528 Msa0734430:intron 40.0%
AACCATTACTATGGACCTCA+TGG + chr5_1:48439615-48439634 Msa0734430:intron 40.0%
AACATAACCACTGTCATCTC+CGG - chr5_1:48439823-48439842 None:intergenic 40.0%
GTGTAGCGTGTATAAAGGTT+GGG - chr5_1:48439976-48439995 None:intergenic 40.0%
TGTGTAGCGTGTATAAAGGT+TGG - chr5_1:48439977-48439996 None:intergenic 40.0%
AACCTTTATACACGCTACAC+AGG + chr5_1:48439976-48439995 Msa0734430:intron 40.0%
GCCATATCTTTGAGCAATGT+GGG + chr5_1:48439998-48440017 Msa0734430:intron 40.0%
TCCCACATTGCTCAAAGATA+TGG - chr5_1:48440002-48440021 None:intergenic 40.0%
! TTCAACACCTTCAATGGGTT+GGG - chr5_1:48440044-48440063 None:intergenic 40.0%
CAACCTTCAACACCTTCAAT+GGG - chr5_1:48440049-48440068 None:intergenic 40.0%
ATGTCACAATTGGGCAACTA+GGG - chr5_1:48440134-48440153 None:intergenic 40.0%
AATGTCACAATTGGGCAACT+AGG - chr5_1:48440135-48440154 None:intergenic 40.0%
GGCAACTCAAATGTCACAAT+TGG - chr5_1:48440144-48440163 None:intergenic 40.0%
!! ACATTTGAGTTGCCTCATGT+TGG + chr5_1:48440150-48440169 Msa0734430:intron 40.0%
CCTTATAAAACCGGCTAGTA+AGG - chr5_1:48440269-48440288 None:intergenic 40.0%
!! CCTTACTAGCCGGTTTTATA+AGG + chr5_1:48440266-48440285 Msa0734430:intron 40.0%
!! ACTAGCCGGTTTTATAAGGA+TGG + chr5_1:48440270-48440289 Msa0734430:intron 40.0%
!! CTAGCCGGTTTTATAAGGAT+GGG + chr5_1:48440271-48440290 Msa0734430:intron 40.0%
!! CGGTTTTATAAGGATGGGTT+AGG + chr5_1:48440276-48440295 Msa0734430:intron 40.0%
TTAGGCCCCAAATTTCAACA+TGG + chr5_1:48440294-48440313 Msa0734430:intron 40.0%
CTAATTGCGGTGTAGAAGTT+TGG - chr5_1:48440343-48440362 None:intergenic 40.0%
TACACCGCAATTAGTCAGTA+AGG + chr5_1:48440349-48440368 Msa0734430:intron 40.0%
ACACCGCAATTAGTCAGTAA+GGG + chr5_1:48440350-48440369 Msa0734430:intron 40.0%
!!! GACCGTTTTAAGGATGAGTT+AGG + chr5_1:48440376-48440395 Msa0734430:intron 40.0%
TGGTGGAAAATAGGTTTAGG+TGG + chr5_1:48440607-48440626 Msa0734430:intron 40.0%
!! GTAGATGATGGAGGATAGTT+AGG + chr5_1:48440675-48440694 Msa0734430:intron 40.0%
!!! AGGTTTTGTTGGGTTGTGTT+AGG - chr5_1:48441011-48441030 None:intergenic 40.0%
AACTCTCTAACAGACCACTA+GGG - chr5_1:48441149-48441168 None:intergenic 40.0%
TAACTCTCTAACAGACCACT+AGG - chr5_1:48441150-48441169 None:intergenic 40.0%
TAGTGGTCTGTTAGAGAGTT+AGG + chr5_1:48441149-48441168 Msa0734430:intron 40.0%
AGTGGTCTGTTAGAGAGTTA+GGG + chr5_1:48441150-48441169 Msa0734430:intron 40.0%
TGGTGGAAAATAGGTTTAGG+TGG + chr5_1:48440607-48440626 Msa0734430:intron 40.0%
!! GTAGATGATGGAGGATAGTT+AGG + chr5_1:48440675-48440694 Msa0734430:intron 40.0%
!!! AGGTTTTGTTGGGTTGTGTT+AGG - chr5_1:48441011-48441030 None:intergenic 40.0%
GATCTATTCAAGGTCCATGT+GGG + chr5_1:48441764-48441783 Msa0734430:intron 40.0%
ATCTATTCAAGGTCCATGTG+GGG + chr5_1:48441765-48441784 Msa0734430:intron 40.0%
TAGCATATCCAAGATCCGTT+GGG - chr5_1:48442115-48442134 None:intergenic 40.0%
ATAGCATATCCAAGATCCGT+TGG - chr5_1:48442116-48442135 None:intergenic 40.0%
TACCACTACTTGAGGTTTAG+AGG + chr5_1:48442447-48442466 Msa0734430:intron 40.0%
TTCCTCTAAACCTCAAGTAG+TGG - chr5_1:48442452-48442471 None:intergenic 40.0%
ATGTTCCAATTAGGAGATGG+AGG + chr5_1:48442543-48442562 Msa0734430:intron 40.0%
ATTGACCTCCATCTCCTAAT+TGG - chr5_1:48442551-48442570 None:intergenic 40.0%
CGCTAAATGTTTATCCTCCT+TGG - chr5_1:48442964-48442983 None:intergenic 40.0%
TACAAGATATCTTCGCTGGT+TGG + chr5_1:48443262-48443281 Msa0734430:CDS 40.0%
! ACAAGATATCTTCGCTGGTT+GGG + chr5_1:48443263-48443282 Msa0734430:CDS 40.0%
TGTCTGGATATCTAATGGAG+CGG + chr5_1:48443361-48443380 Msa0734430:intron 40.0%
CTATTCCACCTAAAATGGAG+GGG + chr5_1:48443498-48443517 Msa0734430:intron 40.0%
CTAAAATGGAGGGGAAAAGT+GGG + chr5_1:48443507-48443526 Msa0734430:intron 40.0%
AAGTGGGATATTGGATGGAA+TGG + chr5_1:48443523-48443542 Msa0734430:intron 40.0%
TCATTGAAGGTTCCGTTGTT+TGG - chr5_1:48443582-48443601 None:intergenic 40.0%
AAGGTCAGTACTCTTGTGTT+GGG - chr5_1:48443897-48443916 None:intergenic 40.0%
! TCAAATCTAGGTGCTGTACA+AGG - chr5_1:48443916-48443935 None:intergenic 40.0%
GAATTATGCCTCAAGAGCAA+CGG + chr5_1:48444110-48444129 Msa0734430:intron 40.0%
AATTACAACCGTTGCTCTTG+AGG - chr5_1:48444121-48444140 None:intergenic 40.0%
!! GCTTAAGTTTTTAGGCCAAG+CGG - chr5_1:48444501-48444520 None:intergenic 40.0%
TAGTGTGATACTCTCTTGAG+TGG - chr5_1:48444658-48444677 None:intergenic 40.0%
GCACGTAATGAGGTAATTTC+CGG + chr5_1:48444844-48444863 Msa0734430:intron 40.0%
TATCCAAATTCTGTACACCC+AGG + chr5_1:48445518-48445537 Msa0734430:intron 40.0%
! AAATGCCAGTTTTGCTACCT+GGG - chr5_1:48445538-48445557 None:intergenic 40.0%
ATAACTTGGATGCAAGAAGG+TGG + chr5_1:48445567-48445586 Msa0734430:CDS 40.0%
ATGCTGATGAAATTGGCTGA+AGG + chr5_1:48445722-48445741 Msa0734430:CDS 40.0%
ACATACACTTCTGCATAGTC+AGG - chr5_1:48445945-48445964 None:intergenic 40.0%
TCGTGTAGCCAATTATGAGA+AGG + chr5_1:48446073-48446092 Msa0734430:CDS 40.0%
GTTTATGAGACGGTAGAAGA+GGG + chr5_1:48446178-48446197 Msa0734430:CDS 40.0%
AAAATGATTGACATGGCCAG+TGG + chr5_1:48446211-48446230 Msa0734430:CDS 40.0%
! ATTGGCAGAAGATCCACTTT+TGG - chr5_1:48446617-48446636 None:intergenic 40.0%
AAAGTGGATCTTCTGCCAAT+AGG + chr5_1:48446617-48446636 Msa0734430:intron 40.0%
TATTCAAATGCAGATGAGGC+AGG - chr5_1:48446647-48446666 None:intergenic 40.0%
TTACGCCGAGATGTGAATTA+CGG + chr5_1:48446747-48446766 Msa0734430:CDS 40.0%
CTCACCTTGTAAAGGACATT+GGG - chr5_1:48446776-48446795 None:intergenic 40.0%
ACTCACCTTGTAAAGGACAT+TGG - chr5_1:48446777-48446796 None:intergenic 40.0%
!! CCCATGATTTGGTAGAATCT+TGG + chr5_1:48446908-48446927 Msa0734430:intron 40.0%
GCCAAGATTCTACCAAATCA+TGG - chr5_1:48446912-48446931 None:intergenic 40.0%
GTTGACGACATTGTCATTAC+AGG - chr5_1:48447137-48447156 None:intergenic 40.0%
CCTTCTATCACCATTTAGGT+AGG - chr5_1:48447188-48447207 None:intergenic 40.0%
CCTACCTAAATGGTGATAGA+AGG + chr5_1:48447185-48447204 Msa0734430:intron 40.0%
! TTGGCCTTCTATCACCATTT+AGG - chr5_1:48447192-48447211 None:intergenic 40.0%
ATGACTTGAAGTGGATCACT+TGG - chr5_1:48447211-48447230 None:intergenic 40.0%
ATTCATTGAGATCACCATGG+AGG + chr5_1:48447374-48447393 Msa0734430:intron 40.0%
ATGACGAATGTATTCCTCCA+TGG - chr5_1:48447391-48447410 None:intergenic 40.0%
TACTGGATGAGGGTAATCTT+TGG + chr5_1:48447481-48447500 Msa0734430:intron 40.0%
!! ATCTTTGGTGGTGCATATTC+AGG + chr5_1:48447496-48447515 Msa0734430:intron 40.0%
TGCATATTCAGGAGTGGTTA+GGG + chr5_1:48447507-48447526 Msa0734430:intron 40.0%
GATGATAGAGGCCAAGTATT+AGG + chr5_1:48447531-48447550 Msa0734430:intron 40.0%
ATGTTCACCACCCTAATACT+TGG - chr5_1:48447545-48447564 None:intergenic 40.0%
TATTAGGGTGGTGAACATCT+GGG + chr5_1:48447547-48447566 Msa0734430:intron 40.0%
AAATAGGTGACAGTTGACGA+CGG + chr5_1:48447586-48447605 Msa0734430:intron 40.0%
TTTGCAATAGCAGTCGCTAT+AGG + chr5_1:48447613-48447632 Msa0734430:CDS 40.0%
TCGCTATAGGTGATTCTAAG+TGG + chr5_1:48447626-48447645 Msa0734430:CDS 40.0%
CTTCACATTGCTTCTAGCGA+CGG + chr5_1:48437038-48437057 Msa0734430:five_prime_UTR 45.0%
ATTAGCGACGAAGAACACGA+CGG + chr5_1:48437094-48437113 Msa0734430:CDS 45.0%
AAAGATTTCCAGCGATAGCG+CGG - chr5_1:48437192-48437211 None:intergenic 45.0%
TGCATTGCTTGGGGATTGTT+TGG + chr5_1:48437234-48437253 Msa0734430:CDS 45.0%
AACGTGAATCTGCGTCAATG+TGG + chr5_1:48437370-48437389 Msa0734430:CDS 45.0%
ACGTGAATCTGCGTCAATGT+GGG + chr5_1:48437371-48437390 Msa0734430:CDS 45.0%
ACAGTCTCGCAAATGCAAAC+TGG - chr5_1:48437506-48437525 None:intergenic 45.0%
TTTCACGGACATGTCTTACC+CGG + chr5_1:48437844-48437863 Msa0734430:intron 45.0%
TTGGGAGAGTTTGTGGAAAC+CGG - chr5_1:48437866-48437885 None:intergenic 45.0%
! AGACTCTTTGGGAGAGTTTG+TGG - chr5_1:48437873-48437892 None:intergenic 45.0%
! TCATAGGGTCGGATTGGATT+TGG - chr5_1:48437931-48437950 None:intergenic 45.0%
CCGAATGTGTCTTCTGTTAG+TGG + chr5_1:48438078-48438097 Msa0734430:intron 45.0%
CTGACTAACGAAAGACACGT+TGG + chr5_1:48438115-48438134 Msa0734430:intron 45.0%
AGCTAGTTGGAGGGCTTATA+AGG + chr5_1:48438677-48438696 Msa0734430:CDS 45.0%
AGAAGTTCAGACAGAAAGCG+AGG + chr5_1:48438752-48438771 Msa0734430:CDS 45.0%
AGATGAAGCAAACTGGCAGT+TGG - chr5_1:48438785-48438804 None:intergenic 45.0%
AAAGCCTCATGTGAATGTGC+AGG + chr5_1:48438885-48438904 Msa0734430:intron 45.0%
GTGCGCCAATACAACTTCAT+GGG - chr5_1:48439270-48439289 None:intergenic 45.0%
AGTGCGCCAATACAACTTCA+TGG - chr5_1:48439271-48439290 None:intergenic 45.0%
AGCCATGAGGTCCATAGTAA+TGG - chr5_1:48439620-48439639 None:intergenic 45.0%
GAATGTCTCTTCTGCGAGTT+TGG + chr5_1:48439668-48439687 Msa0734430:intron 45.0%
TGACAGAGAATCCCAGATCA+CGG + chr5_1:48439766-48439785 Msa0734430:CDS 45.0%
AATCCCAGATCACGGAATAG+TGG + chr5_1:48439774-48439793 Msa0734430:CDS 45.0%
ATCCCAGATCACGGAATAGT+GGG + chr5_1:48439775-48439794 Msa0734430:CDS 45.0%
TACCCACTATTCCGTGATCT+GGG - chr5_1:48439780-48439799 None:intergenic 45.0%
ATACCCACTATTCCGTGATC+TGG - chr5_1:48439781-48439800 None:intergenic 45.0%
!! AGATCACGGAATAGTGGGTA+TGG + chr5_1:48439780-48439799 Msa0734430:CDS 45.0%
CAGACTCATCGTTACAAGAC+CGG + chr5_1:48439927-48439946 Msa0734430:intron 45.0%
GGCCATATCTTTGAGCAATG+TGG + chr5_1:48439997-48440016 Msa0734430:intron 45.0%
!! ATGGGTTGGGTTTAAAAGGG+TGG - chr5_1:48440031-48440050 None:intergenic 45.0%
CTTCAACACCTTCAATGGGT+TGG - chr5_1:48440045-48440064 None:intergenic 45.0%
!! CAACCCATTGAAGGTGTTGA+AGG + chr5_1:48440043-48440062 Msa0734430:intron 45.0%
GCAACCTTCAACACCTTCAA+TGG - chr5_1:48440050-48440069 None:intergenic 45.0%
GAAGGTTGCAATTGCAACGA+AGG + chr5_1:48440061-48440080 Msa0734430:intron 45.0%
AAGGCGGAATTTCCAACATG+CGG - chr5_1:48440098-48440117 None:intergenic 45.0%
TGTCACAATTGGGCAACTAG+GGG - chr5_1:48440133-48440152 None:intergenic 45.0%
!! TTGCCTTGTGTTGGCTTTGA+GGG + chr5_1:48440174-48440193 Msa0734430:intron 45.0%
! TAGTCCCACATCGGTTAGAT+AGG + chr5_1:48440205-48440224 Msa0734430:intron 45.0%
GAGTCCTATCTAACCGATGT+GGG - chr5_1:48440212-48440231 None:intergenic 45.0%
AGAGTCCTATCTAACCGATG+TGG - chr5_1:48440213-48440232 None:intergenic 45.0%
TAAAACCGGCTAGTAAGGTG+AGG - chr5_1:48440264-48440283 None:intergenic 45.0%
CACCGCAATTAGTCAGTAAG+GGG + chr5_1:48440351-48440370 Msa0734430:intron 45.0%
! TGGTTTGGACATATAGGGAG+AGG + chr5_1:48440627-48440646 Msa0734430:intron 45.0%
GTAGTACGGAGAGTAGATGA+TGG + chr5_1:48440663-48440682 Msa0734430:intron 45.0%
AGTTAGGTCACACGAGACAT+AGG + chr5_1:48440691-48440710 Msa0734430:intron 45.0%
!!! CCTCACAAGCAGGTTTTGTT+GGG - chr5_1:48441021-48441040 None:intergenic 45.0%
!! ACCTCACAAGCAGGTTTTGT+TGG - chr5_1:48441022-48441041 None:intergenic 45.0%
AGGCAATATCACTTCCAACG+TGG + chr5_1:48441073-48441092 Msa0734430:intron 45.0%
GGCAATATCACTTCCAACGT+GGG + chr5_1:48441074-48441093 Msa0734430:intron 45.0%
!! ATGTCTAGTTCTAGGCGTGA+GGG - chr5_1:48441115-48441134 None:intergenic 45.0%
! TGGTTTGGACATATAGGGAG+AGG + chr5_1:48440627-48440646 Msa0734430:intron 45.0%
GTAGTACGGAGAGTAGATGA+TGG + chr5_1:48440663-48440682 Msa0734430:intron 45.0%
AGTTAGGTCACACGAGACAT+AGG + chr5_1:48440691-48440710 Msa0734430:intron 45.0%
!!! CCTCACAAGCAGGTTTTGTT+GGG - chr5_1:48441021-48441040 None:intergenic 45.0%
!! ACCTCACAAGCAGGTTTTGT+TGG - chr5_1:48441022-48441041 None:intergenic 45.0%
AGGCAATATCACTTCCAACG+TGG + chr5_1:48441073-48441092 Msa0734430:intron 45.0%
GGCAATATCACTTCCAACGT+GGG + chr5_1:48441074-48441093 Msa0734430:intron 45.0%
!! ATGTCTAGTTCTAGGCGTGA+GGG - chr5_1:48441115-48441134 None:intergenic 45.0%
TTTGCGCTATCAGACCACTA+GGG - chr5_1:48441736-48441755 None:intergenic 45.0%
AACAGGGACGGATCTATTCA+AGG + chr5_1:48441754-48441773 Msa0734430:intron 45.0%
GGATCTATTCAAGGTCCATG+TGG + chr5_1:48441763-48441782 Msa0734430:intron 45.0%
TCAATACCCTAGAGCCATCT+AGG + chr5_1:48442566-48442585 Msa0734430:CDS 45.0%
CAATACCCTAGAGCCATCTA+GGG + chr5_1:48442567-48442586 Msa0734430:CDS 45.0%
AACAATGTCAGCACTGCGAA+AGG + chr5_1:48442630-48442649 Msa0734430:CDS 45.0%
! AGAGGGGACCTTTTGTTGAT+AGG + chr5_1:48442662-48442681 Msa0734430:CDS 45.0%
! GAGGGGACCTTTTGTTGATA+GGG + chr5_1:48442663-48442682 Msa0734430:CDS 45.0%
!! AGGGGACCTTTTGTTGATAG+GGG + chr5_1:48442664-48442683 Msa0734430:CDS 45.0%
CCAACACCCCTATCAACAAA+AGG - chr5_1:48442673-48442692 None:intergenic 45.0%
!! CCTTTTGTTGATAGGGGTGT+TGG + chr5_1:48442670-48442689 Msa0734430:CDS 45.0%
TAGTTTGGACACTGATACCG+AGG + chr5_1:48442744-48442763 Msa0734430:CDS 45.0%
AATTCATTTCCAGCAGCAGC+TGG + chr5_1:48442897-48442916 Msa0734430:CDS 45.0%
! GGGAATGTGACATTTTCACC+AGG - chr5_1:48443129-48443148 None:intergenic 45.0%
! GTGAAAGTTTTACCTCGAGC+TGG - chr5_1:48443230-48443249 None:intergenic 45.0%
! CTTTTCCCCTCCATTTTAGG+TGG - chr5_1:48443506-48443525 None:intergenic 45.0%
!! CCACTTTTCCCCTCCATTTT+AGG - chr5_1:48443509-48443528 None:intergenic 45.0%
CCTAAAATGGAGGGGAAAAG+TGG + chr5_1:48443506-48443525 Msa0734430:intron 45.0%
GGGAAAAGTGGGATATTGGA+TGG + chr5_1:48443518-48443537 Msa0734430:intron 45.0%
! TCCAATAGTCTTGCACCTAG+TGG + chr5_1:48443637-48443656 Msa0734430:intron 45.0%
TCCACTAGGTGCAAGACTAT+TGG - chr5_1:48443641-48443660 None:intergenic 45.0%
TCTTGCACCTAGTGGAAGAT+TGG + chr5_1:48443645-48443664 Msa0734430:intron 45.0%
! GCAAATCTGACGGATAGGAA+TGG - chr5_1:48443822-48443841 None:intergenic 45.0%
! ATGGTGCAAATCTGACGGAT+AGG - chr5_1:48443827-48443846 None:intergenic 45.0%
CAAGGTCAGTACTCTTGTGT+TGG - chr5_1:48443898-48443917 None:intergenic 45.0%
TTTCGAGCTGACAATCCTGA+AGG + chr5_1:48444814-48444833 Msa0734430:CDS 45.0%
! TGACAATCCTGAAGGCATAG+AGG + chr5_1:48444822-48444841 Msa0734430:CDS 45.0%
GTTGGGTCTTCTACAATTGC+TGG - chr5_1:48445364-48445383 None:intergenic 45.0%
TACACAGAGAAAGGTCGACA+TGG - chr5_1:48445484-48445503 None:intergenic 45.0%
CTACCTGGGTGTACAGAATT+TGG - chr5_1:48445524-48445543 None:intergenic 45.0%
! CAAATGCCAGTTTTGCTACC+TGG - chr5_1:48445539-48445558 None:intergenic 45.0%
ATTGGCTGAAGGAAGATGCA+AGG + chr5_1:48445733-48445752 Msa0734430:CDS 45.0%
! CTTTTGCAGGCCAGATTTTG+AGG + chr5_1:48446028-48446047 Msa0734430:intron 45.0%
GGTTTATGAGACGGTAGAAG+AGG + chr5_1:48446177-48446196 Msa0734430:intron 45.0%
GTTGAAAATTGCCGTCTACG+TGG + chr5_1:48446287-48446306 Msa0734430:intron 45.0%
AAAGCAATGAGCCACGTAGA+CGG - chr5_1:48446301-48446320 None:intergenic 45.0%
GGATGCCGTAATTCACATCT+CGG - chr5_1:48446755-48446774 None:intergenic 45.0%
GCATCCCAATGTCCTTTACA+AGG + chr5_1:48446769-48446788 Msa0734430:CDS 45.0%
GATAGAGATGGCACAATCCA+AGG - chr5_1:48447033-48447052 None:intergenic 45.0%
! TGGCAGGCTCCAAAACTTTT+TGG - chr5_1:48447057-48447076 None:intergenic 45.0%
TGACCTAGTTGAGCATGTAC+TGG + chr5_1:48447464-48447483 Msa0734430:intron 45.0%
CATCCAGTACATGCTCAACT+AGG - chr5_1:48447470-48447489 None:intergenic 45.0%
AGTTGAGCATGTACTGGATG+AGG + chr5_1:48447470-48447489 Msa0734430:intron 45.0%
GTTGAGCATGTACTGGATGA+GGG + chr5_1:48447471-48447490 Msa0734430:intron 45.0%
TGGATGAGGGTAATCTTTGG+TGG + chr5_1:48447484-48447503 Msa0734430:intron 45.0%
GTGCATATTCAGGAGTGGTT+AGG + chr5_1:48447506-48447525 Msa0734430:intron 45.0%
AGTGGTTAGGGAGATGATAG+AGG + chr5_1:48447519-48447538 Msa0734430:intron 45.0%
ATAGAGGCCAAGTATTAGGG+TGG + chr5_1:48447535-48447554 Msa0734430:intron 45.0%
GTATTAGGGTGGTGAACATC+TGG + chr5_1:48447546-48447565 Msa0734430:intron 45.0%
GAACATCTGGGAATGGTCAT+TGG + chr5_1:48447559-48447578 Msa0734430:intron 45.0%
!!! TAGTTTTAATATTAAAATTA+GGG - chr5_1:48440923-48440942 None:intergenic 5.0%
!!! TTAGTTTTAATATTAAAATT+AGG - chr5_1:48440924-48440943 None:intergenic 5.0%
!!! TAGTTTTAATATTAAAATTA+GGG - chr5_1:48440923-48440942 None:intergenic 5.0%
!!! TTAGTTTTAATATTAAAATT+AGG - chr5_1:48440924-48440943 None:intergenic 5.0%
GACGAAGAACACGACGGAAA+CGG + chr5_1:48437100-48437119 Msa0734430:CDS 50.0%
TGGGAGAGTTTGTGGAAACC+GGG - chr5_1:48437865-48437884 None:intergenic 50.0%
CTCGTTTCATAGGGTCGGAT+TGG - chr5_1:48437937-48437956 None:intergenic 50.0%
CTTATCTTCACACGCTCGCA+AGG - chr5_1:48438222-48438241 None:intergenic 50.0%
! TGCACCGGCGAAATAATGCT+TGG - chr5_1:48438313-48438332 None:intergenic 50.0%
GGACCCTCCTCAACAAAACA+AGG - chr5_1:48438528-48438547 None:intergenic 50.0%
!! GTTGCAGGAGCATTGCAAGA+TGG + chr5_1:48438561-48438580 Msa0734430:CDS 50.0%
! GAGCATTGCAAGATGGTGCT+AGG + chr5_1:48438568-48438587 Msa0734430:CDS 50.0%
CCAACTAGCTGCCAGATCAA+AGG - chr5_1:48438667-48438686 None:intergenic 50.0%
CCTTTGATCTGGCAGCTAGT+TGG + chr5_1:48438664-48438683 Msa0734430:CDS 50.0%
TTGATCTGGCAGCTAGTTGG+AGG + chr5_1:48438667-48438686 Msa0734430:CDS 50.0%
TGATCTGGCAGCTAGTTGGA+GGG + chr5_1:48438668-48438687 Msa0734430:CDS 50.0%
TTTCATCCTTCGGCTGTACG+CGG + chr5_1:48438705-48438724 Msa0734430:CDS 50.0%
ACAGCCTGCACATTCACATG+AGG - chr5_1:48438892-48438911 None:intergenic 50.0%
AAGAAGAGTCCTGACTCCTG+AGG - chr5_1:48439301-48439320 None:intergenic 50.0%
TTGGAGAACTTGAGGGAGCT+GGG - chr5_1:48439719-48439738 None:intergenic 50.0%
TTTGGAGAACTTGAGGGAGC+TGG - chr5_1:48439720-48439739 None:intergenic 50.0%
GGCAGCAATTCATATTCCGC+CGG + chr5_1:48439801-48439820 Msa0734430:CDS 50.0%
ATAACCACTGTCATCTCCGG+CGG - chr5_1:48439820-48439839 None:intergenic 50.0%
TCATCGTTACAAGACCGGAC+CGG + chr5_1:48439932-48439951 Msa0734430:intron 50.0%
GCAACCCACACTATACAAGC+CGG - chr5_1:48439954-48439973 None:intergenic 50.0%
GGCCTGTGTAGCGTGTATAA+AGG - chr5_1:48439981-48440000 None:intergenic 50.0%
GCAACTCAAATGCCGCATGT+TGG + chr5_1:48440083-48440102 Msa0734430:intron 50.0%
CTAGGGGTGGATCGCAATAA+AGG - chr5_1:48440117-48440136 None:intergenic 50.0%
ACACAAGGCAAGCCAACATG+AGG - chr5_1:48440165-48440184 None:intergenic 50.0%
!! CATGTTGGCTTGCCTTGTGT+TGG + chr5_1:48440165-48440184 Msa0734430:intron 50.0%
!! CTTGCCTTGTGTTGGCTTTG+AGG + chr5_1:48440173-48440192 Msa0734430:intron 50.0%
!! TGCCTTGTGTTGGCTTTGAG+GGG + chr5_1:48440175-48440194 Msa0734430:intron 50.0%
! GGGTGGATTTAGTCCCACAT+CGG + chr5_1:48440196-48440215 Msa0734430:intron 50.0%
! CGCCCCTTACTGACTAATTG+CGG - chr5_1:48440356-48440375 None:intergenic 50.0%
CGCAATTAGTCAGTAAGGGG+CGG + chr5_1:48440354-48440373 Msa0734430:intron 50.0%
TACACCGCAATTAGTCGGCA+AGG + chr5_1:48440410-48440429 Msa0734430:intron 50.0%
ACACCGCAATTAGTCGGCAA+GGG + chr5_1:48440411-48440430 Msa0734430:intron 50.0%
! GTACGGAGAGTAGATGATGG+AGG + chr5_1:48440666-48440685 Msa0734430:intron 50.0%
GTTGTCCCACTAAGTGGAGT+CGG - chr5_1:48440827-48440846 None:intergenic 50.0%
! CCAAGTGTTGTCCCACTAAG+TGG - chr5_1:48440833-48440852 None:intergenic 50.0%
CCACTTAGTGGGACAACACT+TGG + chr5_1:48440830-48440849 Msa0734430:intron 50.0%
CCCAACAAAACCTGCTTGTG+AGG + chr5_1:48441018-48441037 Msa0734430:intron 50.0%
CAAAACCTGCTTGTGAGGTG+AGG + chr5_1:48441023-48441042 Msa0734430:intron 50.0%
GTGTGTTAAGAGTCCCACGT+TGG - chr5_1:48441090-48441109 None:intergenic 50.0%
!! TGTCTAGTTCTAGGCGTGAG+GGG - chr5_1:48441114-48441133 None:intergenic 50.0%
!! GATGTCTAGTTCTAGGCGTG+AGG - chr5_1:48441116-48441135 None:intergenic 50.0%
CACGCCTAGAACTAGACATC+TGG + chr5_1:48441116-48441135 Msa0734430:intron 50.0%
!! CGCTCCAGATGTCTAGTTCT+AGG - chr5_1:48441123-48441142 None:intergenic 50.0%
! GTACGGAGAGTAGATGATGG+AGG + chr5_1:48440666-48440685 Msa0734430:intron 50.0%
GTTGTCCCACTAAGTGGAGT+CGG - chr5_1:48440827-48440846 None:intergenic 50.0%
! CCAAGTGTTGTCCCACTAAG+TGG - chr5_1:48440833-48440852 None:intergenic 50.0%
CCACTTAGTGGGACAACACT+TGG + chr5_1:48440830-48440849 Msa0734430:intron 50.0%
CCCAACAAAACCTGCTTGTG+AGG + chr5_1:48441018-48441037 Msa0734430:intron 50.0%
CAAAACCTGCTTGTGAGGTG+AGG + chr5_1:48441023-48441042 Msa0734430:intron 50.0%
GTGTGTTAAGAGTCCCACGT+TGG - chr5_1:48441090-48441109 None:intergenic 50.0%
!! TGTCTAGTTCTAGGCGTGAG+GGG - chr5_1:48441114-48441133 None:intergenic 50.0%
!! GATGTCTAGTTCTAGGCGTG+AGG - chr5_1:48441116-48441135 None:intergenic 50.0%
CACGCCTAGAACTAGACATC+TGG + chr5_1:48441116-48441135 Msa0734430:intron 50.0%
!! CGCTCCAGATGTCTAGTTCT+AGG - chr5_1:48441123-48441142 None:intergenic 50.0%
GTTTGCGCTATCAGACCACT+AGG - chr5_1:48441737-48441756 None:intergenic 50.0%
! AGTGGTCTGATAGCGCAAAC+AGG + chr5_1:48441737-48441756 Msa0734430:intron 50.0%
! GTGGTCTGATAGCGCAAACA+GGG + chr5_1:48441738-48441757 Msa0734430:intron 50.0%
! TCTGATAGCGCAAACAGGGA+CGG + chr5_1:48441742-48441761 Msa0734430:intron 50.0%
GCTATCAGGTTTCCGCTCAT+GGG - chr5_1:48442086-48442105 None:intergenic 50.0%
TGCTATCAGGTTTCCGCTCA+TGG - chr5_1:48442087-48442106 None:intergenic 50.0%
ATGAGCGGAAACCTGATAGC+AGG + chr5_1:48442086-48442105 Msa0734430:intron 50.0%
! AGACACCCTAGATGGCTCTA+GGG - chr5_1:48442575-48442594 None:intergenic 50.0%
CGACATTCAGACACCCTAGA+TGG - chr5_1:48442583-48442602 None:intergenic 50.0%
TCAGCACTGCGAAAGGAAGA+TGG + chr5_1:48442637-48442656 Msa0734430:CDS 50.0%
TGCGAAAGGAAGATGGTCAG+AGG + chr5_1:48442644-48442663 Msa0734430:CDS 50.0%
GCGAAAGGAAGATGGTCAGA+GGG + chr5_1:48442645-48442664 Msa0734430:CDS 50.0%
CGAAAGGAAGATGGTCAGAG+GGG + chr5_1:48442646-48442665 Msa0734430:CDS 50.0%
!!! GCTTCTGCCCCTCTTTTTTC+CGG + chr5_1:48442870-48442889 Msa0734430:intron 50.0%
ACCCAGCATCTGATCAGCAA+CGG - chr5_1:48442940-48442959 None:intergenic 50.0%
GGATATCTAATGGAGCGGAG+TGG + chr5_1:48443366-48443385 Msa0734430:intron 50.0%
GGAGGGGAAAAGTGGGATAT+TGG + chr5_1:48443514-48443533 Msa0734430:intron 50.0%
AGTTGGCTGTCGTGCTTTGT+TGG + chr5_1:48444746-48444765 Msa0734430:intron 50.0%
TTACGTGCCTCTATGCCTTC+AGG - chr5_1:48444832-48444851 None:intergenic 50.0%
! AGGCATAGAGGCACGTAATG+AGG + chr5_1:48444834-48444853 Msa0734430:CDS 50.0%
GTACACCCAGGTAGCAAAAC+TGG + chr5_1:48445530-48445549 Msa0734430:intron 50.0%
TTGGATGCAAGAAGGTGGTC+AGG + chr5_1:48445572-48445591 Msa0734430:CDS 50.0%
! TCGCTGCTTGCTACTGTTTG+TGG - chr5_1:48445696-48445715 None:intergenic 50.0%
! GATAGTGGCTCCCCATGATT+TGG + chr5_1:48446897-48446916 Msa0734430:intron 50.0%
!! GGATTCATAGGAGTGCCAAC+TGG + chr5_1:48446936-48446955 Msa0734430:intron 50.0%
CCTCAAAGTCTCCTAGAGGT+TGG - chr5_1:48447270-48447289 None:intergenic 50.0%
! CCAACCTCTAGGAGACTTTG+AGG + chr5_1:48447267-48447286 Msa0734430:intron 50.0%
ATGGCCTCAAAGTCTCCTAG+AGG - chr5_1:48447274-48447293 None:intergenic 50.0%
GTTGCTCAAGCGAGTCATCA+GGG - chr5_1:48447325-48447344 None:intergenic 50.0%
TGTTGCTCAAGCGAGTCATC+AGG - chr5_1:48447326-48447345 None:intergenic 50.0%
! TGGTGGTGCATATTCAGGAG+TGG + chr5_1:48447501-48447520 Msa0734430:intron 50.0%
CTAGCGACGGTAACAAACCG+TGG + chr5_1:48437051-48437070 Msa0734430:five_prime_UTR 55.0%
AATCCAATCCGCGCTATCGC+TGG + chr5_1:48437181-48437200 Msa0734430:CDS 55.0%
TTTCCAGCGATAGCGCGGAT+TGG - chr5_1:48437187-48437206 None:intergenic 55.0%
CCTGCAACAAGTACGCGACT+TGG - chr5_1:48438549-48438568 None:intergenic 55.0%
! CCAAGTCGCGTACTTGTTGC+AGG + chr5_1:48438546-48438565 Msa0734430:CDS 55.0%
TTCATCCTTCGGCTGTACGC+GGG + chr5_1:48438706-48438725 Msa0734430:CDS 55.0%
CTAGTCATGCCTCAGGAGTC+AGG + chr5_1:48439289-48439308 Msa0734430:intron 55.0%
TATTCCGCCGGAGATGACAG+TGG + chr5_1:48439813-48439832 Msa0734430:CDS 55.0%
CCACACTATACAAGCCGGTC+CGG - chr5_1:48439949-48439968 None:intergenic 55.0%
!! CGGACCGGCTTGTATAGTGT+GGG + chr5_1:48439947-48439966 Msa0734430:intron 55.0%
GGGGTGGATCGCAATAAAGG+CGG - chr5_1:48440114-48440133 None:intergenic 55.0%
CACAATTGGGCAACTAGGGG+TGG - chr5_1:48440130-48440149 None:intergenic 55.0%
!! GCCTTGTGTTGGCTTTGAGG+GGG + chr5_1:48440176-48440195 Msa0734430:intron 55.0%
ACCCCCTCAAAGCCAACACA+AGG - chr5_1:48440180-48440199 None:intergenic 55.0%
!! TTGTGTTGGCTTTGAGGGGG+TGG + chr5_1:48440179-48440198 Msa0734430:intron 55.0%
GCACTCCTCACCTTACTAGC+CGG + chr5_1:48440256-48440275 Msa0734430:intron 55.0%
! GTAAGGGGCGGACCGTTTTA+AGG + chr5_1:48440366-48440385 Msa0734430:intron 55.0%
CACCGCAATTAGTCGGCAAG+GGG + chr5_1:48440412-48440431 Msa0734430:intron 55.0%
!! AGGGTGTTGCGTGGAATGTG+TGG + chr5_1:48440514-48440533 Msa0734430:intron 55.0%
ACTAAGTGGAGTCGGCTGCA+TGG - chr5_1:48440819-48440838 None:intergenic 55.0%
! ATGCAGCCGACTCCACTTAG+TGG + chr5_1:48440818-48440837 Msa0734430:intron 55.0%
! TGCAGCCGACTCCACTTAGT+GGG + chr5_1:48440819-48440838 Msa0734430:intron 55.0%
ACTAAGTGGAGTCGGCTGCA+TGG - chr5_1:48440819-48440838 None:intergenic 55.0%
! ATGCAGCCGACTCCACTTAG+TGG + chr5_1:48440818-48440837 Msa0734430:intron 55.0%
! TGCAGCCGACTCCACTTAGT+GGG + chr5_1:48440819-48440838 Msa0734430:intron 55.0%
! CTATGGGCTTTAGCCCCACA+TGG - chr5_1:48441781-48441800 None:intergenic 55.0%
TGTGGGGCTAAAGCCCATAG+CGG + chr5_1:48441781-48441800 Msa0734430:intron 55.0%
TGTCTAGATCCGCCCATGAG+CGG + chr5_1:48442071-48442090 Msa0734430:intron 55.0%
ATCAGGTTTCCGCTCATGGG+CGG - chr5_1:48442083-48442102 None:intergenic 55.0%
AGCGGAAACCTGATAGCAGG+TGG + chr5_1:48442089-48442108 Msa0734430:intron 55.0%
CAGACACCCTAGATGGCTCT+AGG - chr5_1:48442576-48442595 None:intergenic 55.0%
TGCCGTTGCTGATCAGATGC+TGG + chr5_1:48442935-48442954 Msa0734430:CDS 55.0%
GCCGTTGCTGATCAGATGCT+GGG + chr5_1:48442936-48442955 Msa0734430:CDS 55.0%
TGATCAGATGCTGGGTCCCA+AGG + chr5_1:48442944-48442963 Msa0734430:CDS 55.0%
CAGTATCGTCGCCTCAAGCA+CGG + chr5_1:48443712-48443731 Msa0734430:intron 55.0%
AGAATCACGGATGAGCCGCT+TGG + chr5_1:48444483-48444502 Msa0734430:intron 55.0%
!!! TGCAGGCCAGATTTTGAGGC+TGG + chr5_1:48446032-48446051 Msa0734430:intron 55.0%
!!! GCAGGCCAGATTTTGAGGCT+GGG + chr5_1:48446033-48446052 Msa0734430:intron 55.0%
CGTAGCCCAGCCTCAAAATC+TGG - chr5_1:48446041-48446060 None:intergenic 55.0%
ATTGACATGGCCAGTGGACG+TGG + chr5_1:48446217-48446236 Msa0734430:CDS 55.0%
TATTTGCCCACCACGTCCAC+TGG - chr5_1:48446230-48446249 None:intergenic 55.0%
GATGAGGCAGGCTCTCCTAT+TGG - chr5_1:48446635-48446654 None:intergenic 55.0%
GGGTGGTGAACATCTGGGAA+TGG + chr5_1:48447552-48447571 Msa0734430:intron 55.0%
TCATCCTTCGGCTGTACGCG+GGG + chr5_1:48438707-48438726 Msa0734430:CDS 60.0%
TGGCGCACTAGTCATGCCTC+AGG + chr5_1:48439282-48439301 Msa0734430:intron 60.0%
!! CCGGACCGGCTTGTATAGTG+TGG + chr5_1:48439946-48439965 Msa0734430:intron 60.0%
! CGCCCCTTGCCGACTAATTG+CGG - chr5_1:48440417-48440436 None:intergenic 60.0%
CGCAATTAGTCGGCAAGGGG+CGG + chr5_1:48440415-48440434 Msa0734430:intron 60.0%
CAAGGGGCGGACCGCAATTA+AGG + chr5_1:48440428-48440447 Msa0734430:intron 60.0%
!! GTGGAGATGAGGGTGTTGCG+TGG + chr5_1:48440505-48440524 Msa0734430:intron 60.0%
GCACTCCTCACCTCACAAGC+AGG - chr5_1:48441031-48441050 None:intergenic 60.0%
! CATCTGGAGCGTGACCCTAG+TGG + chr5_1:48441132-48441151 Msa0734430:intron 60.0%
GCACTCCTCACCTCACAAGC+AGG - chr5_1:48441031-48441050 None:intergenic 60.0%
! CATCTGGAGCGTGACCCTAG+TGG + chr5_1:48441132-48441151 Msa0734430:intron 60.0%
CCTGATAGCAGGTGGCCCAA+CGG + chr5_1:48442097-48442116 Msa0734430:intron 60.0%
TCAGATGCTGGGTCCCAAGG+AGG + chr5_1:48442947-48442966 Msa0734430:CDS 60.0%
TAGGTGAGTCTGCCAGCTCG+AGG + chr5_1:48443215-48443234 Msa0734430:intron 60.0%
! CCTGACTAGCTCCGTGCTTG+AGG - chr5_1:48443726-48443745 None:intergenic 60.0%
CCTCAAGCACGGAGCTAGTC+AGG + chr5_1:48443723-48443742 Msa0734430:CDS 60.0%
ACATGGCCAGTGGACGTGGT+GGG + chr5_1:48446221-48446240 Msa0734430:CDS 60.0%
CCGTTGGGCCACCTGCTATC+AGG - chr5_1:48442100-48442119 None:intergenic 65.0%
GCAGGTGGCCCAACGGATCT+TGG + chr5_1:48442104-48442123 Msa0734430:intron 65.0%
GCAACAGCTCCAGCTGCTGC+TGG - chr5_1:48442909-48442928 None:intergenic 65.0%
GCAGCTGGAGCTGTTGCAGC+TGG + chr5_1:48442912-48442931 Msa0734430:CDS 65.0%
GACATGGCCAGTGGACGTGG+TGG + chr5_1:48446220-48446239 Msa0734430:CDS 65.0%
GGTACCCCGCGTACAGCCGA+AGG - chr5_1:48438714-48438733 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 48436968 48447657 48436968 ID=Msa0734430;Name=Msa0734430
chr5_1 mRNA 48436968 48447657 48436968 ID=Msa0734430-mRNA-1;Parent=Msa0734430;Name=Msa0734430-mRNA-1;_AED=0.10;_eAED=0.10;_QI=117|0.8|0.75|0.87|1|1|16|0|578
chr5_1 exon 48436968 48437270 48436968 ID=Msa0734430-mRNA-1:exon:13851;Parent=Msa0734430-mRNA-1
chr5_1 exon 48437360 48437423 48437360 ID=Msa0734430-mRNA-1:exon:13852;Parent=Msa0734430-mRNA-1
chr5_1 exon 48438478 48438773 48438478 ID=Msa0734430-mRNA-1:exon:13853;Parent=Msa0734430-mRNA-1
chr5_1 exon 48439669 48439857 48439669 ID=Msa0734430-mRNA-1:exon:13854;Parent=Msa0734430-mRNA-1
chr5_1 exon 48442556 48442765 48442556 ID=Msa0734430-mRNA-1:exon:13855;Parent=Msa0734430-mRNA-1
chr5_1 exon 48442897 48442992 48442897 ID=Msa0734430-mRNA-1:exon:13856;Parent=Msa0734430-mRNA-1
chr5_1 exon 48443218 48443316 48443218 ID=Msa0734430-mRNA-1:exon:13857;Parent=Msa0734430-mRNA-1
chr5_1 exon 48443715 48443744 48443715 ID=Msa0734430-mRNA-1:exon:13858;Parent=Msa0734430-mRNA-1
chr5_1 exon 48444802 48444855 48444802 ID=Msa0734430-mRNA-1:exon:13859;Parent=Msa0734430-mRNA-1
chr5_1 exon 48445540 48445593 48445540 ID=Msa0734430-mRNA-1:exon:13860;Parent=Msa0734430-mRNA-1
chr5_1 exon 48445677 48445754 48445677 ID=Msa0734430-mRNA-1:exon:13861;Parent=Msa0734430-mRNA-1
chr5_1 exon 48445867 48445958 48445867 ID=Msa0734430-mRNA-1:exon:13862;Parent=Msa0734430-mRNA-1
chr5_1 exon 48446037 48446094 48446037 ID=Msa0734430-mRNA-1:exon:13863;Parent=Msa0734430-mRNA-1
chr5_1 exon 48446178 48446252 48446178 ID=Msa0734430-mRNA-1:exon:13864;Parent=Msa0734430-mRNA-1
chr5_1 exon 48446701 48446790 48446701 ID=Msa0734430-mRNA-1:exon:13865;Parent=Msa0734430-mRNA-1
chr5_1 exon 48447592 48447657 48447592 ID=Msa0734430-mRNA-1:exon:13866;Parent=Msa0734430-mRNA-1
chr5_1 five_prime_UTR 48436968 48437084 48436968 ID=Msa0734430-mRNA-1:five_prime_utr;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48437085 48437270 48437085 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48437360 48437423 48437360 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48438478 48438773 48438478 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48439669 48439857 48439669 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48442556 48442765 48442556 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48442897 48442992 48442897 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48443218 48443316 48443218 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48443715 48443744 48443715 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48444802 48444855 48444802 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48445540 48445593 48445540 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48445677 48445754 48445677 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48445867 48445958 48445867 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48446037 48446094 48446037 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48446178 48446252 48446178 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48446701 48446790 48446701 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
chr5_1 CDS 48447592 48447657 48447592 ID=Msa0734430-mRNA-1:cds;Parent=Msa0734430-mRNA-1
Gene Sequence

>Msa0734430

ATGGCAACAATTAGCGACGAAGAACACGACGGAAACGGCATTCATCAAACGCCGTTACGAATCCCTGAATTGCTCTATGTTTCTGTGAAGATGGAGAATCCAATCCGCGCTATCGCTGGAAATCTTTTTCCTCACGTTTTTTGTTCTTCTGCATTGCTTGGGGATTGTTTGGATTCTTCGAAAGCTATTTTGATGGAACGTGAATCTGCGTCAATGTGGGAGTTGAGCTTTGTTGTTCCACAAAATCATGAAGCTTTGGATTTCAAATTCCTCCTAAAGCCAAAAGATGAGAATTCACCTTGTTTTGTTGAGGAGGGTCCAAGTCGCGTACTTGTTGCAGGAGCATTGCAAGATGGTGCTAGGCTTGCTTCGTTTAAGCTTGATAATGATCAGGCTGTTGAGTATAAAGTATTTGTTCAAGCAAGCAAAGTTTCTTCCTTTGATCTGGCAGCTAGTTGGAGGGCTTATAAGGAGAACTTTCATCCTTCGGCTGTACGCGGGGTACCCGACGTCAGCATAAATTCAGAAGTTCAGACAGAAAGCGAGAATGTCTCTTCTGCGAGTTTGGAACTTGATCTTGAGCATTATGTTGTCCCAGCTCCCTCAAGTTCTCCAAATTCATCTGCTGTATATGCAGCTGACATGACAGAGAATCCCAGATCACGGAATAGTGGGTATGGCAGCAATTCATATTCCGCCGGAGATGACAGTGGTTATGTTGATCAACCTGAAACTGAGATGGAGGTCAATACCCTAGAGCCATCTAGGGTGTCTGAATGTCGCAAACTTGTTAAATCTCTGTCAGTGGGAACAATGTCAGCACTGCGAAAGGAAGATGGTCAGAGGGGACCTTTTGTTGATAGGGGTGTTGGATTTCCAAGAATTACAAAATCTTCTAGTTTAAGGTCATTTACTGTTGATCTTAGTTTGGACACTGATACCGAGAATTCATTTCCAGCAGCAGCTGGAGCTGTTGCAGCTGGTGCCGTTGCTGATCAGATGCTGGGTCCCAAGGAGGATAAACATTTAGCGATTGTCATGGTGAGTCTGCCAGCTCGAGGTAAAACTTTCACTGCAGCTAAACTTACAAGATATCTTCGCTGGTTGGGTCATAATACAAAACACTTCAACGTTGGTAAGTATCGTCGCCTCAAGCACGGAGCTAGTCAGTCTGCTGATTTCTTTCGAGCTGACAATCCTGAAGGCATAGAGGCACGTAATGAGGTAGCAAAACTGGCATTTGAAGATATGATAACTTGGATGCAAGAAGGTGGTCAGGTTGGGATATTTGATGCCACAAACAGTAGCAAGCAGCGAAGAAATATGCTGATGAAATTGGCTGAAGGAAGATGCAAGATTATCTTTCTGGAGACAATATGCAATGATGTAGACATGATTGAAAGGAATATTCGTTTTAAAATTCAGCAAAGTCCTGACTATGCAGAAGTGCCAGATTTTGAGGCTGGGCTACGAGACTTCAAAACTCGTGTAGCCAATTATGAGAAGGTTTATGAGACGGTAGAAGAGGGATCTTACATAAAAATGATTGACATGGCCAGTGGACGTGGTGGGCAAATACAAATCAGACCTTTTCATTGGGCTTCTTTAATACACTTAAAGATGTTAGTTACGCCGAGATGTGAATTACGGCATCCCAATGTCCTTTACAAGGTGACAGTTGACGACGGAAAATTTGCAATAGCAGTCGCTATAGGTGATTCTAAGTGGCAGCGCTAA

Protein sequence

>Msa0734430

MATISDEEHDGNGIHQTPLRIPELLYVSVKMENPIRAIAGNLFPHVFCSSALLGDCLDSSKAILMERESASMWELSFVVPQNHEALDFKFLLKPKDENSPCFVEEGPSRVLVAGALQDGARLASFKLDNDQAVEYKVFVQASKVSSFDLAASWRAYKENFHPSAVRGVPDVSINSEVQTESENVSSASLELDLEHYVVPAPSSSPNSSAVYAADMTENPRSRNSGYGSNSYSAGDDSGYVDQPETEMEVNTLEPSRVSECRKLVKSLSVGTMSALRKEDGQRGPFVDRGVGFPRITKSSSLRSFTVDLSLDTDTENSFPAAAGAVAAGAVADQMLGPKEDKHLAIVMVSLPARGKTFTAAKLTRYLRWLGHNTKHFNVGKYRRLKHGASQSADFFRADNPEGIEARNEVAKLAFEDMITWMQEGGQVGIFDATNSSKQRRNMLMKLAEGRCKIIFLETICNDVDMIERNIRFKIQQSPDYAEVPDFEAGLRDFKTRVANYEKVYETVEEGSYIKMIDMASGRGGQIQIRPFHWASLIHLKMLVTPRCELRHPNVLYKVTVDDGKFAIAVAIGDSKWQR*