AlfalfaGEDB | MS.gene23368

M. sativa cultivar XinJiangDaYe / MS.gene23368

KEGG: K14488
GO: GO:0008150 GO:0009719 GO:0009725 GO:0009733 GO:0010033 GO:0042221 GO:0050896
PFAM: PF02519.17

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23368.t1	AES89296.1	91.2	91	8	0	1	91	1	91	6.00E-41	176.4

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23368.t1	P33083	78.9	90	16	2	1	88	1	89	3.0e-33	142.1

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23368.t1	G7JL21	91.2	91	8	0	1	91	1	91	4.3e-41	176.4

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049369	MS.gene23368	0.804961	1.68E-49	-1.69E-46
MS.gene049661	MS.gene23368	0.828214	1.02E-54	-1.69E-46
MS.gene049662	MS.gene23368	0.829876	4.03E-55	-1.69E-46
MS.gene049758	MS.gene23368	0.827499	1.51E-54	-1.69E-46
MS.gene050128	MS.gene23368	0.863044	3.30E-64	-1.69E-46
MS.gene050301	MS.gene23368	0.81288	3.39E-51	-1.69E-46
MS.gene050397	MS.gene23368	0.80559	1.24E-49	-1.69E-46
MS.gene050432	MS.gene23368	0.806713	7.20E-50	-1.69E-46
MS.gene050464	MS.gene23368	0.803505	3.38E-49	-1.69E-46
MS.gene050529	MS.gene23368	0.811315	7.45E-51	-1.69E-46
MS.gene052178	MS.gene23368	0.81426	1.69E-51	-1.69E-46
MS.gene052188	MS.gene23368	0.825899	3.64E-54	-1.69E-46
MS.gene052253	MS.gene23368	0.803298	3.73E-49	-1.69E-46
MS.gene052310	MS.gene23368	0.818393	2.01E-52	-1.69E-46
MS.gene052340	MS.gene23368	0.839926	1.18E-57	-1.69E-46
MS.gene05316	MS.gene23368	0.815959	7.07E-52	-1.69E-46
MS.gene053181	MS.gene23368	0.807572	4.73E-50	-1.69E-46
MS.gene053557	MS.gene23368	0.833057	6.63E-56	-1.69E-46
MS.gene055116	MS.gene23368	0.839906	1.20E-57	-1.69E-46
MS.gene055277	MS.gene23368	0.816401	5.64E-52	-1.69E-46
MS.gene055422	MS.gene23368	0.821573	3.76E-53	-1.69E-46
MS.gene055533	MS.gene23368	0.809403	1.93E-50	-1.69E-46
MS.gene056511	MS.gene23368	0.81232	4.50E-51	-1.69E-46
MS.gene056609	MS.gene23368	0.819312	1.24E-52	-1.69E-46
MS.gene056612	MS.gene23368	0.807652	4.55E-50	-1.69E-46
MS.gene05702	MS.gene23368	0.805703	1.17E-49	-1.69E-46
MS.gene05735	MS.gene23368	0.804026	2.63E-49	-1.69E-46
MS.gene057448	MS.gene23368	0.84817	7.27E-60	-1.69E-46
MS.gene057449	MS.gene23368	0.86209	6.48E-64	-1.69E-46
MS.gene057450	MS.gene23368	0.853232	2.74E-61	-1.69E-46
MS.gene057537	MS.gene23368	0.817451	3.27E-52	-1.69E-46
MS.gene057779	MS.gene23368	0.827044	1.94E-54	-1.69E-46
MS.gene057796	MS.gene23368	0.812537	4.03E-51	-1.69E-46
MS.gene057927	MS.gene23368	0.813912	2.01E-51	-1.69E-46
MS.gene05858	MS.gene23368	0.815316	9.84E-52	-1.69E-46
MS.gene058660	MS.gene23368	0.819322	1.23E-52	-1.69E-46
MS.gene058928	MS.gene23368	0.854275	1.37E-61	-1.69E-46
MS.gene05907	MS.gene23368	0.812177	4.83E-51	-1.69E-46
MS.gene059294	MS.gene23368	0.805741	1.15E-49	-1.69E-46
MS.gene059366	MS.gene23368	0.814668	1.37E-51	-1.69E-46
MS.gene059597	MS.gene23368	0.802206	6.26E-49	-1.69E-46
MS.gene059688	MS.gene23368	0.826352	2.84E-54	-1.69E-46
MS.gene059692	MS.gene23368	0.832888	7.31E-56	-1.69E-46
MS.gene059695	MS.gene23368	0.8199	9.11E-53	-1.69E-46
MS.gene059807	MS.gene23368	0.843109	1.72E-58	-1.69E-46
MS.gene059894	MS.gene23368	0.832357	9.90E-56	-1.69E-46
MS.gene06037	MS.gene23368	0.855591	5.69E-62	-1.69E-46
MS.gene060495	MS.gene23368	0.833261	5.90E-56	-1.69E-46
MS.gene060818	MS.gene23368	0.809875	1.52E-50	-1.69E-46
MS.gene061041	MS.gene23368	0.800416	1.46E-48	-1.69E-46
MS.gene061049	MS.gene23368	0.844745	6.25E-59	-1.69E-46
MS.gene061051	MS.gene23368	-0.838893	2.19E-57	-1.69E-46

PPI:

Gene1	Gene2	Type
MS.gene003590	MS.gene23368	PPI
MS.gene045368	MS.gene23368	PPI
MS.gene23368	MS.gene031198	PPI
MS.gene063112	MS.gene23368	PPI
MS.gene23368	MS.gene50764	PPI
MS.gene062973	MS.gene23368	PPI
MS.gene23368	MS.gene75672	PPI
MS.gene77526	MS.gene23368	PPI
MS.gene047517	MS.gene23368	PPI
MS.gene045360	MS.gene23368	PPI
MS.gene23368	MS.gene50654	PPI
MS.gene057818	MS.gene23368	PPI
MS.gene23368	MS.gene014670	PPI
MS.gene23368	MS.gene77524	PPI
MS.gene50687	MS.gene23368	PPI
MS.gene75677	MS.gene23368	PPI
MS.gene23368	MS.gene79887	PPI
MS.gene057795	MS.gene23368	PPI
MS.gene23368	MS.gene75314	PPI
MS.gene68165	MS.gene23368	PPI
MS.gene23368	MS.gene75679	PPI
MS.gene045361	MS.gene23368	PPI
MS.gene23368	MS.gene40325	PPI
MS.gene50675	MS.gene23368	PPI
MS.gene003591	MS.gene23368	PPI
MS.gene062979	MS.gene23368	PPI
MS.gene062943	MS.gene23368	PPI
MS.gene23368	MS.gene057797	PPI
MS.gene01358	MS.gene23368	PPI
MS.gene23368	MS.gene003614	PPI
MS.gene23368	MS.gene014668	PPI
MS.gene003608	MS.gene23368	PPI
MS.gene23368	MS.gene77528	PPI
MS.gene23368	MS.gene79886	PPI
MS.gene23368	MS.gene014671	PPI
MS.gene23368	MS.gene50765	PPI
MS.gene23368	MS.gene003596	PPI
MS.gene40326	MS.gene23368	PPI
MS.gene062952	MS.gene23368	PPI
MS.gene23368	MS.gene062974	PPI
MS.gene50676	MS.gene23368	PPI
MS.gene23370	MS.gene23368	PPI
MS.gene50766	MS.gene23368	PPI
MS.gene23368	MS.gene003583	PPI
MS.gene23368	MS.gene062951	PPI
MS.gene23368	MS.gene057801	PPI
MS.gene003594	MS.gene23368	PPI
MS.gene23368	MS.gene77527	PPI
MS.gene23368	MS.gene79891	PPI
MS.gene23368	MS.gene68162	PPI
MS.gene23368	MS.gene045367	PPI
MS.gene23368	MS.gene045364	PPI
MS.gene50665	MS.gene23368	PPI
MS.gene23368	MS.gene045363	PPI
MS.gene23368	MS.gene75675	PPI
MS.gene50677	MS.gene23368	PPI
MS.gene003625	MS.gene23368	PPI
MS.gene003586	MS.gene23368	PPI
MS.gene062988	MS.gene23368	PPI
MS.gene23368	MS.gene50652	PPI
MS.gene23368	MS.gene002380	PPI
MS.gene50763	MS.gene23368	PPI
MS.gene031200	MS.gene23368	PPI
MS.gene045365	MS.gene23368	PPI
MS.gene23368	MS.gene50684	PPI
MS.gene50659	MS.gene23368	PPI
MS.gene75316	MS.gene23368	PPI
MS.gene23368	MS.gene75315	PPI
MS.gene23368	MS.gene68164	PPI
MS.gene057790	MS.gene23368	PPI
MS.gene23368	MS.gene68759	PPI
MS.gene003624	MS.gene23368	PPI
MS.gene23371	MS.gene23368	PPI
MS.gene031201	MS.gene23368	PPI
MS.gene031199	MS.gene23368	PPI
MS.gene77529	MS.gene23368	PPI
MS.gene68761	MS.gene23368	PPI
MS.gene014667	MS.gene23368	PPI
MS.gene68760	MS.gene23368	PPI
MS.gene75676	MS.gene23368	PPI
MS.gene23368	MS.gene014223	PPI
MS.gene057778	MS.gene23368	PPI
MS.gene75673	MS.gene23368	PPI
MS.gene045366	MS.gene23368	PPI
MS.gene23368	MS.gene014669	PPI
MS.gene23368	MS.gene057808	PPI
MS.gene062963	MS.gene23368	PPI
MS.gene75674	MS.gene23368	PPI
MS.gene79890	MS.gene23368	PPI
MS.gene003615	MS.gene23368	PPI
MS.gene23368	MS.gene68163	PPI
MS.gene003602	MS.gene23368	PPI
MS.gene23372	MS.gene23368	PPI
MS.gene003627	MS.gene23368	PPI
MS.gene003577	MS.gene23368	PPI
MS.gene23368	MS.gene79889	PPI
MS.gene062984	MS.gene23368	PPI
MS.gene40327	MS.gene23368	PPI
MS.gene23368	MS.gene014222	PPI
MS.gene23368	MS.gene79888	PPI
MS.gene23368	MS.gene75678	PPI
MS.gene23368	MS.gene01764	PPI
MS.gene045362	MS.gene23368	PPI
MS.gene77523	MS.gene23368	PPI
MS.gene23368	MS.gene79885	PPI
MS.gene003587	MS.gene23368	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23368.t1	MTR_4g072230	91.209	91	8	0	1	91	1	91	2.17e-59	176
MS.gene23368.t1	MTR_4g072310	84.946	93	12	1	1	91	1	93	4.60e-55	166
MS.gene23368.t1	MTR_4g072270	80.645	93	16	1	1	91	1	93	2.64e-53	161
MS.gene23368.t1	MTR_4g072880	80.645	93	16	1	1	91	1	93	1.30e-52	159
MS.gene23368.t1	MTR_4g072860	82.796	93	14	1	1	91	1	93	1.33e-52	159
MS.gene23368.t1	MTR_4g072250	80.435	92	17	1	1	91	1	92	4.27e-51	155
MS.gene23368.t1	MTR_4g072500	75.269	93	20	2	1	91	1	92	3.05e-49	150
MS.gene23368.t1	MTR_4g072480	74.194	93	21	2	1	91	1	92	9.07e-48	147
MS.gene23368.t1	MTR_4g072640	75.824	91	19	2	1	89	1	90	1.26e-47	147
MS.gene23368.t1	MTR_4g072530	73.626	91	21	2	1	89	1	90	6.09e-47	145
MS.gene23368.t1	MTR_4g072620	73.118	93	22	2	1	91	1	92	7.30e-47	145
MS.gene23368.t1	MTR_3g084240	76.344	93	19	2	1	91	1	92	1.42e-46	144
MS.gene23368.t1	MTR_3g084170	75.269	93	20	2	1	91	1	92	1.63e-45	141
MS.gene23368.t1	MTR_4g072680	70.968	93	24	2	1	91	1	92	1.09e-44	139
MS.gene23368.t1	MTR_4g072460	70.968	93	24	2	1	91	1	92	1.99e-44	139
MS.gene23368.t1	MTR_4g050700	70.968	93	25	1	1	91	1	93	3.04e-44	138
MS.gene23368.t1	MTR_2g012410	70.968	93	25	1	1	91	1	93	3.04e-44	138
MS.gene23368.t1	MTR_4g072730	69.565	92	25	2	1	90	1	91	3.71e-44	138
MS.gene23368.t1	MTR_3g084150	72.043	93	23	2	1	91	1	92	5.45e-44	137
MS.gene23368.t1	MTR_3g084220	72.043	93	23	2	1	91	1	92	2.51e-43	135
MS.gene23368.t1	MTR_4g072570	72.043	93	23	2	1	91	1	92	3.52e-43	135
MS.gene23368.t1	MTR_3g084180	70.968	93	24	2	1	91	1	92	5.11e-43	135
MS.gene23368.t1	MTR_3g117630	76.471	85	18	1	4	86	3	87	6.95e-43	135
MS.gene23368.t1	MTR_4g072370	74.725	91	18	2	1	89	1	88	1.11e-42	134
MS.gene23368.t1	MTR_3g110032	69.892	93	26	1	1	91	1	93	2.39e-42	133
MS.gene23368.t1	MTR_8g461410	68.817	93	26	2	1	91	1	92	2.54e-42	133
MS.gene23368.t1	MTR_4g072240	65.934	91	29	1	1	89	1	91	3.31e-42	133
MS.gene23368.t1	MTR_3g110038	72.727	88	21	2	1	86	1	87	6.37e-42	132
MS.gene23368.t1	MTR_4g072220	65.591	93	30	1	1	91	1	93	8.27e-42	132
MS.gene23368.t1	MTR_4g072850	74.468	94	21	2	1	91	1	94	9.82e-42	132
MS.gene23368.t1	MTR_4g072870	67.033	91	28	1	1	89	1	91	1.35e-41	131
MS.gene23368.t1	MTR_4g072290	70.330	91	15	1	1	91	1	79	1.00e-40	129
MS.gene23368.t1	MTR_3g084250	67.742	93	27	2	1	91	1	92	1.95e-40	129
MS.gene23368.t1	MTR_4g072660	65.591	93	24	2	1	91	1	87	2.19e-40	128
MS.gene23368.t1	MTR_4g072300	62.637	91	32	1	1	89	1	91	4.71e-40	127
MS.gene23368.t1	MTR_3g110042	71.591	88	22	2	1	86	1	87	1.42e-39	126
MS.gene23368.t1	MTR_4g072600	71.111	90	18	2	1	88	1	84	1.65e-39	126
MS.gene23368.t1	MTR_4g072580	72.222	90	17	2	1	88	1	84	1.95e-39	126
MS.gene23368.t1	MTR_3g084260	66.667	93	29	1	1	91	1	93	2.40e-39	125
MS.gene23368.t1	MTR_4g072260	62.366	93	33	1	1	91	1	93	2.89e-39	125
MS.gene23368.t1	MTR_4g072830	71.111	90	21	2	1	88	1	87	1.23e-38	124
MS.gene23368.t1	MTR_4g072890	62.637	91	32	1	1	89	1	91	1.40e-38	124
MS.gene23368.t1	MTR_5g008370	84.286	70	9	1	23	90	22	91	3.98e-38	124
MS.gene23368.t1	MTR_4g072740	69.231	91	20	2	1	89	1	85	8.26e-38	122
MS.gene23368.t1	MTR_3g084210	69.892	93	25	2	1	91	1	92	1.04e-37	122
MS.gene23368.t1	MTR_4g072330	65.934	91	26	2	1	89	1	88	1.40e-37	121
MS.gene23368.t1	MTR_4g072490	67.033	91	22	2	1	89	1	85	2.19e-37	120
MS.gene23368.t1	MTR_3g084190	68.817	93	26	2	1	91	1	92	4.97e-37	120
MS.gene23368.t1	MTR_4g072940	73.256	86	20	2	3	85	33	118	6.84e-37	120
MS.gene23368.t1	MTR_5g008360	73.418	79	19	1	15	91	5	83	8.25e-37	119
MS.gene23368.t1	MTR_8g461420	70.330	91	24	2	1	89	1	90	1.07e-36	119
MS.gene23368.t1	MTR_3g084230	70.330	91	24	2	1	89	1	90	2.44e-36	118
MS.gene23368.t1	MTR_4g072470	68.889	90	20	2	1	88	1	84	4.01e-36	117
MS.gene23368.t1	MTR_4g072610	68.889	90	19	2	1	88	1	83	7.89e-36	117
MS.gene23368.t1	MTR_3g084160	65.591	93	29	2	1	91	1	92	3.27e-35	115
MS.gene23368.t1	MTR_4g072380	66.304	92	22	3	1	89	1	86	1.07e-34	114
MS.gene23368.t1	MTR_4g072820	66.304	92	21	3	1	89	1	85	1.49e-34	113
MS.gene23368.t1	MTR_3g110045	72.941	85	21	1	9	91	67	151	1.84e-34	115
MS.gene23368.t1	MTR_4g072540	64.835	91	25	2	1	89	1	86	2.75e-34	113
MS.gene23368.t1	MTR_4g072630	62.637	91	27	2	1	89	1	86	3.35e-34	112
MS.gene23368.t1	MTR_4g072465	64.773	88	24	2	1	86	1	83	3.66e-34	112
MS.gene23368.t1	MTR_4g072720	64.835	91	25	2	1	89	1	86	8.90e-34	111
MS.gene23368.t1	MTR_4g072590	76.471	68	14	1	24	89	18	85	1.73e-33	110
MS.gene23368.t1	MTR_4g072650	66.667	90	21	3	1	88	1	83	3.11e-33	110
MS.gene23368.t1	MTR_4g072910	60.000	95	28	3	4	89	7	100	1.17e-32	109
MS.gene23368.t1	MTR_4g072670	75.714	70	15	1	22	89	17	86	1.64e-32	108
MS.gene23368.t1	MTR_4g072550	65.000	80	25	2	15	91	24	103	2.48e-32	108
MS.gene23368.t1	MTR_3g084200	73.973	73	16	2	1	71	1	72	3.87e-32	108
MS.gene23368.t1	MTR_4g072980	55.208	96	37	3	1	91	1	95	1.84e-31	106
MS.gene23368.t1	MTR_4g072560	54.082	98	36	3	1	89	1	98	3.73e-31	105
MS.gene23368.t1	MTR_5g008350	66.250	80	19	2	1	78	1	74	4.21e-31	104
MS.gene23368.t1	MTR_4g072510	71.429	70	18	1	22	89	17	86	5.67e-31	104
MS.gene23368.t1	MTR_4g072450	74.627	67	15	1	24	88	18	84	5.04e-30	102
MS.gene23368.t1	MTR_4g072770	77.778	63	12	1	26	86	15	77	4.50e-29	99.8
MS.gene23368.t1	MTR_4g072690	73.134	67	16	1	24	88	18	84	8.70e-29	99.0
MS.gene23368.t1	MTR_3g117640	65.217	69	21	1	25	90	33	101	1.44e-28	99.4
MS.gene23368.t1	MTR_4g072280	58.667	75	29	1	1	73	1	75	4.61e-27	94.7
MS.gene23368.t1	MTR_4g072750	64.000	75	22	3	1	71	1	74	2.89e-26	92.8
MS.gene23368.t1	MTR_6g077850	48.276	87	42	2	4	88	13	98	3.42e-25	90.5
MS.gene23368.t1	MTR_8g461400	56.044	91	15	3	1	91	1	66	4.38e-25	89.4
MS.gene23368.t1	MTR_3g113310	57.353	68	26	2	24	89	40	106	3.33e-24	88.2
MS.gene23368.t1	MTR_3g110035	56.962	79	31	2	15	91	61	138	3.99e-24	89.0
MS.gene23368.t1	MTR_3g117610	59.701	67	24	2	24	88	43	108	3.66e-23	85.9
MS.gene23368.t1	MTR_4g072190	57.143	70	27	2	22	89	32	100	3.98e-23	85.1
MS.gene23368.t1	MTR_4g072930	47.561	82	37	1	11	86	26	107	1.25e-21	82.0
MS.gene23368.t1	MTR_5g021820	55.224	67	27	2	25	89	39	104	5.06e-21	80.1
MS.gene23368.t1	MTR_8g076040	55.224	67	27	2	25	89	40	105	1.05e-20	79.3
MS.gene23368.t1	MTR_4g124750	55.224	67	27	2	25	89	68	133	2.25e-19	77.4
MS.gene23368.t1	MTR_2g043960	55.224	67	27	2	25	89	75	140	2.67e-19	77.4
MS.gene23368.t1	MTR_4g072840	47.778	90	16	3	1	89	1	60	9.32e-19	73.2
MS.gene23368.t1	MTR_7g118010	47.761	67	30	2	26	88	23	88	6.40e-16	67.0
MS.gene23368.t1	MTR_1g024085	51.429	70	28	3	15	82	29	94	6.92e-16	68.2
MS.gene23368.t1	MTR_3g092220	48.485	66	29	2	21	82	28	92	1.14e-15	66.6
MS.gene23368.t1	MTR_4g025830	46.970	66	29	2	26	86	79	143	1.28e-15	67.8
MS.gene23368.t1	MTR_8g461210	42.045	88	47	3	4	89	14	99	1.57e-15	66.6
MS.gene23368.t1	MTR_0388s0020	42.466	73	36	2	21	88	70	141	3.19e-15	66.6
MS.gene23368.t1	MTR_4g005310	49.296	71	30	3	17	84	56	123	7.67e-15	65.5
MS.gene23368.t1	MTR_1g094750	42.105	95	40	4	4	84	16	109	9.80e-15	64.3
MS.gene23368.t1	MTR_8g026730	43.284	67	33	2	26	88	27	92	1.95e-14	63.5
MS.gene23368.t1	MTR_1g009150	54.839	62	25	2	25	84	70	130	3.27e-14	64.3
MS.gene23368.t1	MTR_1g061570	48.529	68	32	2	25	90	18	84	3.52e-14	63.2
MS.gene23368.t1	MTR_1g063950	42.667	75	40	2	15	87	37	110	8.42e-14	62.0
MS.gene23368.t1	MTR_4g072160	50.769	65	27	3	23	84	34	96	1.08e-13	62.4
MS.gene23368.t1	MTR_3g109160	38.679	106	43	3	6	90	30	134	3.14e-13	61.6
MS.gene23368.t1	MTR_7g101740	50.000	64	29	2	25	86	39	101	4.56e-13	60.1
MS.gene23368.t1	MTR_1g059770	40.909	66	36	2	26	89	49	113	6.54e-13	60.1
MS.gene23368.t1	MTR_4g005320	50.820	61	27	2	26	84	70	129	7.55e-13	60.5
MS.gene23368.t1	MTR_3g097120	43.243	74	31	2	21	84	4	76	3.38e-12	57.8
MS.gene23368.t1	MTR_7g104940	41.270	63	34	2	29	89	53	114	1.70e-11	56.2
MS.gene23368.t1	MTR_3g105900	68.293	41	11	1	25	63	1171	1211	2.31e-11	58.5
MS.gene23368.t1	MTR_2g095430	47.059	68	27	3	17	76	34	100	5.51e-11	55.1
MS.gene23368.t1	MTR_7g104950	34.667	75	46	2	17	89	41	114	7.53e-11	54.7

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene23368.t1	AT4G38840	63.415	82	27	1	8	86	15	96	6.22e-33	110
MS.gene23368.t1	AT5G18020	65.753	73	22	1	17	86	15	87	5.88e-32	107
MS.gene23368.t1	AT4G34770	68.000	75	20	1	20	90	29	103	8.36e-32	107
MS.gene23368.t1	AT5G18080	61.842	76	26	1	17	89	15	90	3.72e-31	105
MS.gene23368.t1	AT5G18050	60.526	76	27	1	17	89	15	90	1.31e-30	103
MS.gene23368.t1	AT3G03840	53.846	91	31	2	11	90	5	95	1.37e-30	103
MS.gene23368.t1	AT5G18060	62.667	75	25	1	17	88	15	89	1.51e-30	103
MS.gene23368.t1	AT3G03850	59.551	89	27	2	11	90	5	93	1.90e-30	103
MS.gene23368.t1	AT4G38850	58.621	87	21	2	8	89	13	89	2.41e-30	103
MS.gene23368.t1	AT5G18030	58.333	84	30	2	11	89	5	88	2.42e-30	103
MS.gene23368.t1	AT2G21200	65.278	72	22	1	20	88	15	86	3.28e-30	102
MS.gene23368.t1	AT3G03820	54.255	94	35	2	2	90	6	96	6.68e-30	102
MS.gene23368.t1	AT5G18010	59.211	76	28	1	17	89	15	90	1.82e-29	100
MS.gene23368.t1	AT4G38825	64.789	71	22	1	21	88	18	88	2.06e-29	100
MS.gene23368.t1	AT2G21210	51.064	94	40	2	1	88	1	94	4.91e-29	100
MS.gene23368.t1	AT2G21210	62.500	72	23	1	21	88	90	161	2.12e-28	100
MS.gene23368.t1	AT4G34810	63.889	72	19	2	17	81	38	109	1.42e-27	97.1
MS.gene23368.t1	AT4G34800	53.488	86	30	2	1	81	1	81	1.92e-27	96.3
MS.gene23368.t1	AT4G34780	52.128	94	37	2	4	89	3	96	3.70e-26	93.2
MS.gene23368.t1	AT3G03830	54.118	85	30	2	11	86	5	89	6.56e-26	92.0
MS.gene23368.t1	AT4G13790	50.000	86	33	3	8	89	13	92	1.42e-24	88.6
MS.gene23368.t1	AT4G34790	60.000	65	22	1	26	86	39	103	7.25e-24	87.4
MS.gene23368.t1	AT4G34760	58.824	68	25	2	24	89	41	107	9.28e-23	84.7
MS.gene23368.t1	AT4G38860	57.353	68	27	1	24	89	38	105	2.30e-22	83.6
MS.gene23368.t1	AT1G75580	58.824	68	25	2	24	89	42	108	2.63e-22	83.6
MS.gene23368.t1	AT2G21220	51.220	82	34	3	10	86	21	101	5.54e-22	82.4
MS.gene23368.t1	AT3G43120	52.941	68	29	2	25	90	78	144	1.35e-19	78.2
MS.gene23368.t1	AT2G16580	45.455	88	45	2	4	89	22	108	1.59e-19	76.3
MS.gene23368.t1	AT5G20810	54.412	68	28	2	25	90	78	144	4.40e-19	76.6
MS.gene23368.t1	AT1G19830	56.944	72	27	3	21	89	43	113	4.62e-19	75.5
MS.gene23368.t1	AT4G36110	53.731	67	28	2	25	89	39	104	9.95e-19	74.3
MS.gene23368.t1	AT5G20810	54.412	68	28	2	25	90	78	144	1.19e-18	76.3
MS.gene23368.t1	AT2G18010	52.239	67	29	2	25	89	47	112	1.27e-17	71.6
MS.gene23368.t1	AT3G20220	50.704	71	27	3	26	89	47	116	6.10e-17	70.1
MS.gene23368.t1	AT2G46690	41.667	84	42	3	13	90	10	92	1.39e-16	69.3
MS.gene23368.t1	AT5G10990	53.333	60	25	2	25	82	40	98	6.17e-16	68.2
MS.gene23368.t1	AT2G45210	45.070	71	33	2	21	86	74	143	1.27e-15	67.8
MS.gene23368.t1	AT1G19840	45.238	84	40	4	4	82	16	98	1.90e-15	67.0
MS.gene23368.t1	AT1G75590	48.649	74	33	3	11	82	29	99	1.92e-15	67.0
MS.gene23368.t1	AT3G03847	40.000	80	47	1	3	81	48	127	2.18e-15	66.6
MS.gene23368.t1	AT3G61900	46.377	69	31	2	25	88	29	96	2.39e-15	66.6
MS.gene23368.t1	AT5G66260	50.000	66	30	2	26	89	34	98	3.44e-15	65.1
MS.gene23368.t1	AT3G51200	53.125	64	26	3	21	81	34	96	3.83e-15	65.1
MS.gene23368.t1	AT3G60690	48.571	70	30	2	22	86	84	152	6.62e-15	66.2
MS.gene23368.t1	AT5G53590	35.789	95	53	2	1	88	21	114	7.34e-15	65.5
MS.gene23368.t1	AT2G37030	49.231	65	30	2	25	87	48	111	2.96e-14	63.5
MS.gene23368.t1	AT4G34750	45.312	64	32	2	25	86	36	98	3.50e-14	63.9
MS.gene23368.t1	AT4G34750	45.312	64	32	2	25	86	36	98	3.50e-14	63.9
MS.gene23368.t1	AT4G00880	40.909	88	44	3	8	88	7	93	8.91e-14	62.0
MS.gene23368.t1	AT4G12410	43.750	64	30	2	26	84	76	138	1.07e-12	60.1
MS.gene23368.t1	AT4G31320	52.459	61	26	2	26	84	80	139	1.88e-12	60.1
MS.gene23368.t1	AT2G36210	39.474	76	44	1	16	89	44	119	2.64e-12	58.5
MS.gene23368.t1	AT2G24400	52.459	61	26	2	26	84	64	123	3.83e-12	58.9
MS.gene23368.t1	AT4G22620	39.706	68	35	2	22	84	75	141	4.70e-12	58.5
MS.gene23368.t1	AT1G76190	50.000	58	27	2	28	84	23	79	6.52e-12	57.4
MS.gene23368.t1	AT3G12830	36.842	76	45	2	16	89	40	114	1.37e-11	56.6
MS.gene23368.t1	AT3G53250	41.538	65	32	2	25	87	51	111	1.66e-11	56.2
MS.gene23368.t1	AT1G20470	43.056	72	39	2	20	90	17	87	2.63e-11	56.2
MS.gene23368.t1	AT3G53250	41.538	65	32	2	25	87	82	142	2.98e-11	56.2

Find 23 sgRNAs with CRISPR-Local

Find 23 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGTTGGTTCAAGTATGATAT+TGG	0.247037	4.4:+36910523	None:intergenic
GGATATCTTGCCGTGTATAT+TGG	0.318243	4.4:-36910565	MS.gene23368:CDS
AGTAAAGCTGAAGAAGAGTT+TGG	0.322754	4.4:-36910481	MS.gene23368:CDS
GTTGGTTCAAGTATGATATT+GGG	0.382183	4.4:+36910524	None:intergenic
CTCAATAAGTCTTGAAACAA+TGG	0.448732	4.4:+36910502	None:intergenic
CACATAACATCTTGCTTGAA+AGG	0.452058	4.4:-36910403	MS.gene23368:CDS
CCGTGTATATTGGAGAGAAA+CGG	0.483859	4.4:-36910555	MS.gene23368:CDS
GTTTCTCTGGTATCATCAGA+AGG	0.522188	4.4:-36910639	MS.gene23368:CDS
AAAAGCTGTGGACGTGCCAA+AGG	0.525848	4.4:-36910587	MS.gene23368:CDS
ATAAGTCTTGAAACAATGGT+TGG	0.525954	4.4:+36910506	None:intergenic
GACATCTTCGGTGCAAGGAA+TGG	0.540062	4.4:+36910432	None:intergenic
TTTGGATATGATCATCCAAT+GGG	0.545525	4.4:-36910463	MS.gene23368:CDS
TACACGGCAAGATATCCCTT+TGG	0.554268	4.4:+36910571	None:intergenic
GGAATGGTGAGGCCACCCAT+TGG	0.562484	4.4:+36910448	None:intergenic
GTTTGGATATGATCATCCAA+TGG	0.573812	4.4:-36910464	MS.gene23368:CDS
AAAGCTGTGGACGTGCCAAA+GGG	0.577804	4.4:-36910586	MS.gene23368:CDS
TGAAAGACATCTTCGGTGCA+AGG	0.581063	4.4:+36910427	None:intergenic
TCGAACAGTTTCAAAAGCTG+TGG	0.596457	4.4:-36910599	MS.gene23368:CDS
CCGTTTCTCTCCAATATACA+CGG	0.616991	4.4:+36910555	None:intergenic
TTTCTCTGGTATCATCAGAA+GGG	0.617336	4.4:-36910638	MS.gene23368:CDS
GGATATGATCATCCAATGGG+TGG	0.648071	4.4:-36910460	MS.gene23368:CDS
TATGTGTTGAAAGACATCTT+CGG	0.670451	4.4:+36910420	None:intergenic
CTTCGGTGCAAGGAATGGTG+AGG	0.671810	4.4:+36910437	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
	ATAAGTCTTGAAACAATGGT+TGG	+	chr4.4:36910542-36910561	None:intergenic	30.0%
	CTCAATAAGTCTTGAAACAA+TGG	+	chr4.4:36910546-36910565	None:intergenic	30.0%
	TATGTGTTGAAAGACATCTT+CGG	+	chr4.4:36910628-36910647	None:intergenic	30.0%
	TTTGGATATGATCATCCAAT+GGG	-	chr4.4:36910582-36910601	MS.gene23368:CDS	30.0%
!	GTTGGTTCAAGTATGATATT+GGG	+	chr4.4:36910524-36910543	None:intergenic	30.0%
	AGTAAAGCTGAAGAAGAGTT+TGG	-	chr4.4:36910564-36910583	MS.gene23368:CDS	35.0%
	CACATAACATCTTGCTTGAA+AGG	-	chr4.4:36910642-36910661	MS.gene23368:CDS	35.0%
	GTTTGGATATGATCATCCAA+TGG	-	chr4.4:36910581-36910600	MS.gene23368:CDS	35.0%
	TTTCTCTGGTATCATCAGAA+GGG	-	chr4.4:36910407-36910426	MS.gene23368:CDS	35.0%
!	GGTTGGTTCAAGTATGATAT+TGG	+	chr4.4:36910525-36910544	None:intergenic	35.0%
	CCGTGTATATTGGAGAGAAA+CGG	-	chr4.4:36910490-36910509	MS.gene23368:CDS	40.0%
	CCGTTTCTCTCCAATATACA+CGG	+	chr4.4:36910493-36910512	None:intergenic	40.0%
	GGATATCTTGCCGTGTATAT+TGG	-	chr4.4:36910480-36910499	MS.gene23368:CDS	40.0%
	GTTTCTCTGGTATCATCAGA+AGG	-	chr4.4:36910406-36910425	MS.gene23368:CDS	40.0%
	TCGAACAGTTTCAAAAGCTG+TGG	-	chr4.4:36910446-36910465	MS.gene23368:CDS	40.0%
	GGATATGATCATCCAATGGG+TGG	-	chr4.4:36910585-36910604	MS.gene23368:CDS	45.0%
	TACACGGCAAGATATCCCTT+TGG	+	chr4.4:36910477-36910496	None:intergenic	45.0%
!	TGAAAGACATCTTCGGTGCA+AGG	+	chr4.4:36910621-36910640	None:intergenic	45.0%
	AAAAGCTGTGGACGTGCCAA+AGG	-	chr4.4:36910458-36910477	MS.gene23368:CDS	50.0%
	AAAGCTGTGGACGTGCCAAA+GGG	-	chr4.4:36910459-36910478	MS.gene23368:CDS	50.0%
!	GACATCTTCGGTGCAAGGAA+TGG	+	chr4.4:36910616-36910635	None:intergenic	50.0%
!	CTTCGGTGCAAGGAATGGTG+AGG	+	chr4.4:36910611-36910630	None:intergenic	55.0%
	GGAATGGTGAGGCCACCCAT+TGG	+	chr4.4:36910600-36910619	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	36910396	36910671	36910396	ID=MS.gene23368
chr4.4	mRNA	36910396	36910671	36910396	ID=MS.gene23368.t1;Parent=MS.gene23368
chr4.4	exon	36910396	36910671	36910396	ID=MS.gene23368.t1.exon1;Parent=MS.gene23368.t1
chr4.4	CDS	36910396	36910671	36910396	ID=cds.MS.gene23368.t1;Parent=MS.gene23368.t1

Gene Sequence	>MS.gene23368 ATGGGTTTTCGTTTCTCTGGTATCATCAGAAGGGCATCATTTTCTGCAAATCGAACAGTTTCAAAAGCTGTGGACGTGCCAAAGGGATATCTTGCCGTGTATATTGGAGAGAAACGGTTTGTGATCCCAATATCATACTTGAACCAACCATTGTTTCAAGACTTATTGAGTAAAGCTGAAGAAGAGTTTGGATATGATCATCCAATGGGTGGCCTCACCATTCCTTGCACCGAAGATGTCTTTCAACACATAACATCTTGCTTGAAAGGACTATGA
Protein sequence	>MS.gene23368.t1 MGFRFSGIIRRASFSANRTVSKAVDVPKGYLAVYIGEKRFVIPISYLNQPLFQDLLSKAEEEFGYDHPMGGLTIPCTEDVFQHITSCLKGL