AlfalfaGEDB | MS.gene28160

M. sativa cultivar XinJiangDaYe / MS.gene28160

KEGG: -
GO: GO:0003674 GO:0003824 GO:0005575 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0016491 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0046422 GO:0055114 GO:0110165
PFAM: PF07137.14

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28160.t1	XP_003630122.2	98.3	464	7	1	2	464	66	529	3.10E-258	900.6

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28160.t1	G7LBB8	98.3	464	7	1	2	464	66	529	2.2e-258	900.6

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049153	MS.gene28160	0.805113	1.56E-49	-1.69E-46
MS.gene049284	MS.gene28160	0.842225	2.94E-58	-1.69E-46
MS.gene049351	MS.gene28160	0.846762	1.77E-59	-1.69E-46
MS.gene049356	MS.gene28160	0.841757	3.92E-58	-1.69E-46
MS.gene049369	MS.gene28160	0.820401	7.00E-53	-1.69E-46
MS.gene049389	MS.gene28160	0.820478	6.71E-53	-1.69E-46
MS.gene049427	MS.gene28160	0.831003	2.14E-55	-1.69E-46
MS.gene049491	MS.gene28160	0.873438	1.47E-67	-1.69E-46
MS.gene049661	MS.gene28160	0.838733	2.41E-57	-1.69E-46
MS.gene049662	MS.gene28160	0.834147	3.55E-56	-1.69E-46
MS.gene049758	MS.gene28160	0.866891	2.05E-65	-1.69E-46
MS.gene049760	MS.gene28160	0.8103	1.23E-50	-1.69E-46
MS.gene049805	MS.gene28160	0.804166	2.46E-49	-1.69E-46
MS.gene050076	MS.gene28160	0.849106	4.00E-60	-1.69E-46
MS.gene050099	MS.gene28160	0.83138	1.73E-55	-1.69E-46
MS.gene050128	MS.gene28160	0.839199	1.83E-57	-1.69E-46
MS.gene050301	MS.gene28160	0.889011	3.55E-73	-1.69E-46
MS.gene050397	MS.gene28160	0.847344	1.23E-59	-1.69E-46
MS.gene050404	MS.gene28160	0.805968	1.03E-49	-1.69E-46
MS.gene050406	MS.gene28160	0.814863	1.24E-51	-1.69E-46
MS.gene050432	MS.gene28160	0.858517	7.80E-63	-1.69E-46
MS.gene050464	MS.gene28160	0.852613	4.11E-61	-1.69E-46
MS.gene050529	MS.gene28160	0.877747	4.90E-69	-1.69E-46
MS.gene050670	MS.gene28160	0.849984	2.28E-60	-1.69E-46
MS.gene050767	MS.gene28160	0.828561	8.40E-55	-1.69E-46
MS.gene050770	MS.gene28160	0.82947	5.06E-55	-1.69E-46
MS.gene050812	MS.gene28160	0.846186	2.54E-59	-1.69E-46
MS.gene05101	MS.gene28160	0.87233	3.46E-67	-1.69E-46
MS.gene05105	MS.gene28160	0.825568	4.37E-54	-1.69E-46
MS.gene051471	MS.gene28160	0.865457	5.83E-65	-1.69E-46
MS.gene051582	MS.gene28160	0.817905	2.59E-52	-1.69E-46
MS.gene051663	MS.gene28160	0.805407	1.36E-49	-1.69E-46
MS.gene051666	MS.gene28160	0.817085	3.96E-52	-1.69E-46
MS.gene051692	MS.gene28160	0.812363	4.40E-51	-1.69E-46
MS.gene051860	MS.gene28160	0.829086	6.26E-55	-1.69E-46
MS.gene051877	MS.gene28160	0.830346	3.09E-55	-1.69E-46
MS.gene052077	MS.gene28160	0.806589	7.64E-50	-1.69E-46
MS.gene052078	MS.gene28160	0.903486	3.30E-79	-1.69E-46
MS.gene052178	MS.gene28160	0.843112	1.71E-58	-1.69E-46
MS.gene052188	MS.gene28160	0.907807	3.40E-81	-1.69E-46
MS.gene052253	MS.gene28160	0.849723	2.69E-60	-1.69E-46
MS.gene052290	MS.gene28160	0.804464	2.13E-49	-1.69E-46
MS.gene052310	MS.gene28160	0.89001	1.45E-73	-1.69E-46
MS.gene052322	MS.gene28160	0.811154	8.07E-51	-1.69E-46
MS.gene052326	MS.gene28160	0.850565	1.56E-60	-1.69E-46
MS.gene05233	MS.gene28160	-0.801191	1.01E-48	-1.69E-46
MS.gene052340	MS.gene28160	0.8785	2.67E-69	-1.69E-46
MS.gene052421	MS.gene28160	0.804174	2.45E-49	-1.69E-46
MS.gene052481	MS.gene28160	0.836955	6.91E-57	-1.69E-46
MS.gene052484	MS.gene28160	0.843034	1.80E-58	-1.69E-46
MS.gene052485	MS.gene28160	0.879448	1.24E-69	-1.69E-46
MS.gene053103	MS.gene28160	0.832775	7.80E-56	-1.69E-46
MS.gene053104	MS.gene28160	0.805605	1.23E-49	-1.69E-46
MS.gene05316	MS.gene28160	0.807292	5.43E-50	-1.69E-46
MS.gene053209	MS.gene28160	0.852913	3.38E-61	-1.69E-46
MS.gene053322	MS.gene28160	0.826534	2.57E-54	-1.69E-46
MS.gene053449	MS.gene28160	0.808357	3.22E-50	-1.69E-46
MS.gene053557	MS.gene28160	0.860771	1.64E-63	-1.69E-46
MS.gene053559	MS.gene28160	0.815786	7.73E-52	-1.69E-46
MS.gene053836	MS.gene28160	0.869743	2.46E-66	-1.69E-46
MS.gene053907	MS.gene28160	0.801251	9.83E-49	-1.69E-46
MS.gene053928	MS.gene28160	0.809493	1.84E-50	-1.69E-46
MS.gene054123	MS.gene28160	0.864624	1.06E-64	-1.69E-46
MS.gene054349	MS.gene28160	0.819715	1.00E-52	-1.69E-46
MS.gene054376	MS.gene28160	0.834072	3.70E-56	-1.69E-46
MS.gene054473	MS.gene28160	0.801939	7.10E-49	-1.69E-46
MS.gene05455	MS.gene28160	0.832299	1.02E-55	-1.69E-46
MS.gene054802	MS.gene28160	0.821715	3.48E-53	-1.69E-46
MS.gene054803	MS.gene28160	0.824548	7.60E-54	-1.69E-46
MS.gene054804	MS.gene28160	0.823316	1.48E-53	-1.69E-46
MS.gene054955	MS.gene28160	0.852725	3.82E-61	-1.69E-46
MS.gene055116	MS.gene28160	0.852179	5.47E-61	-1.69E-46
MS.gene055254	MS.gene28160	0.817272	3.59E-52	-1.69E-46
MS.gene055277	MS.gene28160	0.867407	1.40E-65	-1.69E-46
MS.gene055390	MS.gene28160	0.86679	2.20E-65	-1.69E-46
MS.gene055397	MS.gene28160	0.825078	5.70E-54	-1.69E-46
MS.gene055412	MS.gene28160	0.829662	4.54E-55	-1.69E-46
MS.gene055422	MS.gene28160	0.884183	2.38E-71	-1.69E-46
MS.gene055428	MS.gene28160	0.861342	1.10E-63	-1.69E-46
MS.gene055499	MS.gene28160	0.802191	6.31E-49	-1.69E-46
MS.gene055533	MS.gene28160	0.814907	1.21E-51	-1.69E-46
MS.gene05553	MS.gene28160	0.83104	2.09E-55	-1.69E-46
MS.gene055712	MS.gene28160	0.80349	3.40E-49	-1.69E-46
MS.gene055896	MS.gene28160	0.820518	6.58E-53	-1.69E-46
MS.gene05592	MS.gene28160	0.812449	4.22E-51	-1.69E-46
MS.gene056191	MS.gene28160	0.829918	3.93E-55	-1.69E-46
MS.gene056314	MS.gene28160	0.813135	2.98E-51	-1.69E-46
MS.gene056407	MS.gene28160	0.848754	5.01E-60	-1.69E-46
MS.gene056410	MS.gene28160	0.845244	4.58E-59	-1.69E-46
MS.gene056511	MS.gene28160	0.81456	1.45E-51	-1.69E-46
MS.gene056609	MS.gene28160	0.887551	1.29E-72	-1.69E-46
MS.gene056612	MS.gene28160	0.85296	3.28E-61	-1.69E-46
MS.gene056659	MS.gene28160	0.829281	5.62E-55	-1.69E-46
MS.gene056719	MS.gene28160	0.812113	4.99E-51	-1.69E-46
MS.gene056796	MS.gene28160	0.825309	5.03E-54	-1.69E-46
MS.gene056897	MS.gene28160	0.815937	7.16E-52	-1.69E-46
MS.gene056899	MS.gene28160	-0.819063	1.41E-52	-1.69E-46
MS.gene057011	MS.gene28160	0.824046	9.98E-54	-1.69E-46
MS.gene05702	MS.gene28160	0.835447	1.67E-56	-1.69E-46
MS.gene057121	MS.gene28160	0.822753	2.00E-53	-1.69E-46
MS.gene057123	MS.gene28160	0.813743	2.19E-51	-1.69E-46
MS.gene057124	MS.gene28160	0.828809	7.31E-55	-1.69E-46
MS.gene057129	MS.gene28160	0.836998	6.74E-57	-1.69E-46
MS.gene057146	MS.gene28160	0.843625	1.25E-58	-1.69E-46
MS.gene057295	MS.gene28160	0.83975	1.31E-57	-1.69E-46
MS.gene05733	MS.gene28160	0.820345	7.20E-53	-1.69E-46
MS.gene05735	MS.gene28160	0.821769	3.39E-53	-1.69E-46
MS.gene057396	MS.gene28160	0.803117	4.06E-49	-1.69E-46
MS.gene057439	MS.gene28160	0.803875	2.83E-49	-1.69E-46
MS.gene057448	MS.gene28160	0.859881	3.04E-63	-1.69E-46
MS.gene057449	MS.gene28160	0.862203	5.99E-64	-1.69E-46
MS.gene057450	MS.gene28160	0.866412	2.91E-65	-1.69E-46
MS.gene057537	MS.gene28160	0.817612	3.01E-52	-1.69E-46
MS.gene057749	MS.gene28160	0.825568	4.37E-54	-1.69E-46
MS.gene057823	MS.gene28160	0.832398	9.67E-56	-1.69E-46
MS.gene057927	MS.gene28160	0.810039	1.41E-50	-1.69E-46
MS.gene058002	MS.gene28160	0.892131	2.11E-74	-1.69E-46
MS.gene058006	MS.gene28160	0.807944	3.95E-50	-1.69E-46
MS.gene058019	MS.gene28160	0.801338	9.44E-49	-1.69E-46
MS.gene058082	MS.gene28160	0.846786	1.75E-59	-1.69E-46
MS.gene05811	MS.gene28160	0.891172	5.06E-74	-1.69E-46
MS.gene058142	MS.gene28160	0.827516	1.50E-54	-1.69E-46
MS.gene058233	MS.gene28160	0.821663	3.58E-53	-1.69E-46
MS.gene058276	MS.gene28160	0.834758	2.49E-56	-1.69E-46
MS.gene058293	MS.gene28160	0.877626	5.40E-69	-1.69E-46
MS.gene058365	MS.gene28160	0.868054	8.68E-66	-1.69E-46
MS.gene05842	MS.gene28160	0.822795	1.96E-53	-1.69E-46
MS.gene058660	MS.gene28160	0.899069	2.85E-77	-1.69E-46
MS.gene058787	MS.gene28160	0.853318	2.59E-61	-1.69E-46
MS.gene058845	MS.gene28160	0.835216	1.91E-56	-1.69E-46
MS.gene05886	MS.gene28160	0.807733	4.38E-50	-1.69E-46
MS.gene058928	MS.gene28160	0.868365	6.89E-66	-1.69E-46
MS.gene058993	MS.gene28160	0.842581	2.37E-58	-1.69E-46
MS.gene05907	MS.gene28160	0.891942	2.50E-74	-1.69E-46
MS.gene059285	MS.gene28160	0.828063	1.11E-54	-1.69E-46
MS.gene059294	MS.gene28160	0.812223	4.72E-51	-1.69E-46
MS.gene059326	MS.gene28160	0.834994	2.17E-56	-1.69E-46
MS.gene059342	MS.gene28160	0.820622	6.22E-53	-1.69E-46
MS.gene059366	MS.gene28160	0.847977	8.22E-60	-1.69E-46
MS.gene059420	MS.gene28160	0.819117	1.37E-52	-1.69E-46
MS.gene059518	MS.gene28160	0.869594	2.75E-66	-1.69E-46
MS.gene059536	MS.gene28160	0.828455	8.90E-55	-1.69E-46
MS.gene059597	MS.gene28160	0.901011	4.12E-78	-1.69E-46
MS.gene05959	MS.gene28160	0.856671	2.75E-62	-1.69E-46
MS.gene059676	MS.gene28160	0.893871	4.20E-75	-1.69E-46
MS.gene059688	MS.gene28160	0.868432	6.56E-66	-1.69E-46
MS.gene059692	MS.gene28160	0.887907	9.44E-73	-1.69E-46
MS.gene059695	MS.gene28160	0.885827	5.81E-72	-1.69E-46
MS.gene059708	MS.gene28160	0.86757	1.24E-65	-1.69E-46
MS.gene059711	MS.gene28160	0.800138	1.66E-48	-1.69E-46
MS.gene05984	MS.gene28160	0.86646	2.81E-65	-1.69E-46
MS.gene05986	MS.gene28160	0.804269	2.34E-49	-1.69E-46
MS.gene059894	MS.gene28160	0.883248	5.27E-71	-1.69E-46
MS.gene059899	MS.gene28160	0.806973	6.34E-50	-1.69E-46
MS.gene059960	MS.gene28160	0.857691	1.37E-62	-1.69E-46
MS.gene059974	MS.gene28160	0.822048	2.92E-53	-1.69E-46
MS.gene060005	MS.gene28160	0.809939	1.48E-50	-1.69E-46
MS.gene06037	MS.gene28160	0.845671	3.51E-59	-1.69E-46
MS.gene060403	MS.gene28160	0.822923	1.83E-53	-1.69E-46
MS.gene060407	MS.gene28160	0.863133	3.09E-64	-1.69E-46
MS.gene060495	MS.gene28160	0.805941	1.05E-49	-1.69E-46
MS.gene060804	MS.gene28160	0.828344	9.47E-55	-1.69E-46
MS.gene060818	MS.gene28160	0.864572	1.10E-64	-1.69E-46
MS.gene060837	MS.gene28160	0.807418	5.10E-50	-1.69E-46
MS.gene06090	MS.gene28160	0.820041	8.46E-53	-1.69E-46
MS.gene061041	MS.gene28160	0.835451	1.66E-56	-1.69E-46
MS.gene061049	MS.gene28160	0.892112	2.14E-74	-1.69E-46
MS.gene061051	MS.gene28160	-0.863899	1.79E-64	-1.69E-46
MS.gene061112	MS.gene28160	0.810981	8.79E-51	-1.69E-46
MS.gene061154	MS.gene28160	0.809053	2.29E-50	-1.69E-46
MS.gene061159	MS.gene28160	0.804733	1.87E-49	-1.69E-46
MS.gene061200	MS.gene28160	0.835657	1.48E-56	-1.69E-46
MS.gene061265	MS.gene28160	0.81028	1.25E-50	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28160.t1	MTR_8g092050	98.276	464	7	1	2	464	66	529	0.0	950

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene28160.t1	AT2G21860	69.432	458	121	3	3	456	69	511	0.0	686

Find 99 sgRNAs with CRISPR-Local

Find 169 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCCAATTTGGATCATTAATT+TGG	0.084716	4.4:+9671613	None:intergenic
ATTCACACATTCATCCAATT+TGG	0.214697	4.4:+9671600	None:intergenic
CACTATTTCATATGAGTCTT+TGG	0.227130	4.4:+9672580	None:intergenic
CTAGATTTGAAGAACAAATT+AGG	0.233092	4.4:-9672677	MS.gene28160:CDS
TTGGTATGAACCGGTGTTTC+AGG	0.234337	4.4:-9672018	MS.gene28160:CDS
GAAGTAAAGGGAAGCATATT+TGG	0.240241	4.4:-9672635	MS.gene28160:CDS
CCCTCTCAACTCTGCTTCTT+GGG	0.260895	4.4:-9674307	MS.gene28160:CDS
GCCCTCTCAACTCTGCTTCT+TGG	0.274661	4.4:-9674308	MS.gene28160:CDS
TATTTCAGTGTATTAGATAA+TGG	0.312534	4.4:-9671918	MS.gene28160:CDS
TCATGCATTGATCCTCCATT+AGG	0.313626	4.4:-9671669	MS.gene28160:CDS
CAAACGAAGAGTCGGTTAAC+TGG	0.314699	4.4:-9672751	MS.gene28160:CDS
TCCAAATTAATGATCCAAAT+TGG	0.322012	4.4:-9671614	MS.gene28160:CDS
TTCGTCCTCTCTCTTTCATT+TGG	0.322166	4.4:+9671756	None:intergenic
TGGAGCTGGCGCGTTGTAGC+GGG	0.328165	4.4:-9672113	MS.gene28160:CDS
GAGTTATTTCAAATGAGTTT+TGG	0.328583	4.4:-9671896	MS.gene28160:CDS
GCTGCAGGGCAGTCTTATAC+TGG	0.330058	4.4:-9671810	MS.gene28160:CDS
TACTAATCAATGCTTATATA+AGG	0.337300	4.4:-9672496	MS.gene28160:CDS
TTCATACGAAAGTGCGAATC+TGG	0.340979	4.4:-9672297	MS.gene28160:CDS
TTCTCCTCCTCCATACCATT+TGG	0.346423	4.4:+9671979	None:intergenic
CATGCATTGATCCTCCATTA+GGG	0.358125	4.4:-9671668	MS.gene28160:CDS
TCAACCATTGGAGGCACATA+TGG	0.360449	4.4:+9672206	None:intergenic
TATGGAGGAGGAGAAAATAT+AGG	0.367865	4.4:-9671971	MS.gene28160:CDS
TCATTTGGATATGCTCCATC+TGG	0.369299	4.4:+9671771	None:intergenic
GACGCAGTTCTGACGATATA+CGG	0.372251	4.4:-9672532	MS.gene28160:CDS
GTTAAGAGAGGTAAGGTATA+TGG	0.378832	4.4:-9671948	MS.gene28160:CDS
GGAGGCACATATGGCTTAGT+AGG	0.394962	4.4:+9672215	None:intergenic
TGGGGTTTGTTCCACTATCA+TGG	0.398219	4.4:-9671843	MS.gene28160:CDS
ATGGAGGAGGAGAAAATATA+GGG	0.404522	4.4:-9671970	MS.gene28160:CDS
TGTAGCTAATGACCTTAGTT+GGG	0.414877	4.4:-9671862	MS.gene28160:CDS
TAATTACATACTTGATCAAC+AGG	0.415438	4.4:+9672332	None:intergenic
TCAGGTACTTAATTGCTTGT+TGG	0.420248	4.4:-9672399	MS.gene28160:CDS
TTCTATAGAGGAAAAGCAAA+AGG	0.423876	4.4:-9672047	MS.gene28160:CDS
ATTGCAGAAGATTTGTTTGT+TGG	0.430954	4.4:-9672155	MS.gene28160:CDS
GTTGAAGAACTGCGGTCGTC+AGG	0.432171	4.4:-9672417	MS.gene28160:CDS
GAGATTCACAATGAAGTAAA+GGG	0.435424	4.4:-9672647	MS.gene28160:CDS
GAACCCTCTGGAGTCCCTAA+TGG	0.441951	4.4:+9671654	None:intergenic
ATGGAGCTGGCGCGTTGTAG+CGG	0.444125	4.4:-9672114	MS.gene28160:CDS
ATGTAGCTAATGACCTTAGT+TGG	0.456001	4.4:-9671863	MS.gene28160:CDS
CATGGAGCTGCTAAAGCTGC+AGG	0.462494	4.4:-9671825	MS.gene28160:CDS
CAGCCTTCAGTAATTCTCTC+TGG	0.462625	4.4:+9672798	None:intergenic
CCTCCAATGGTTGAATTTCG+CGG	0.464187	4.4:-9672197	MS.gene28160:CDS
CTTTAGCAGCTCCATGATAG+TGG	0.464240	4.4:+9671832	None:intergenic
TGAGATTCACAATGAAGTAA+AGG	0.466183	4.4:-9672648	MS.gene28160:CDS
TGCCCGCGAAATTCAACCAT+TGG	0.472472	4.4:+9672194	None:intergenic
CTGTAACACGCAAAGCGAAA+AGG	0.472645	4.4:+9672271	None:intergenic
CTCCAATGGTTGAATTTCGC+GGG	0.485968	4.4:-9672196	MS.gene28160:CDS
CTGCAGGGCAGTCTTATACT+GGG	0.487163	4.4:-9671809	MS.gene28160:CDS
GAATGAAAACTTGAACCCTC+TGG	0.494780	4.4:+9671642	None:intergenic
CATTTGAAGGCCAAATGGTA+TGG	0.506239	4.4:-9671989	MS.gene28160:CDS
CCCAAGAAGCAGAGTTGAGA+GGG	0.506484	4.4:+9674307	None:intergenic
AGAAATGTGAAATCAAAGAG+TGG	0.510895	4.4:-9671716	MS.gene28160:CDS
GCAGTACTTGTTAGTCCAGA+TGG	0.511090	4.4:-9671786	MS.gene28160:CDS
CAGAAGATTTGTTTGTTGGT+TGG	0.512517	4.4:-9672151	MS.gene28160:CDS
CAAGGGAATTGATCATATGC+TGG	0.512768	4.4:+9672083	None:intergenic
AGATTGAAATGGGTTGATGA+AGG	0.515244	4.4:-9672872	MS.gene28160:CDS
CAATATCAGCTATTCTATAG+AGG	0.515759	4.4:-9672059	MS.gene28160:CDS
TAGAGAGTTTGCAATGGAGC+TGG	0.516155	4.4:-9672127	MS.gene28160:CDS
TGCAAACTGTAACCGAAGCA+TGG	0.534436	4.4:-9672559	MS.gene28160:CDS
AGTGGAACAAACCCCAACTA+AGG	0.536966	4.4:+9671850	None:intergenic
TTCAGTAATTCTCTCTGGAG+TGG	0.537115	4.4:+9672803	None:intergenic
AGAAAATATAGGGTTAAGAG+AGG	0.541135	4.4:-9671960	MS.gene28160:CDS
GTGAGGATGGTGGCTATAGT+TGG	0.542421	4.4:-9674345	MS.gene28160:CDS
TTTCGTATGAAGCGATGCAT+CGG	0.549436	4.4:+9672309	None:intergenic
ATATAGGGTTAAGAGAGGTA+AGG	0.560870	4.4:-9671955	MS.gene28160:CDS
TCTATAGAGGAAAAGCAAAA+GGG	0.562818	4.4:-9672046	MS.gene28160:CDS
GATTGAAATGGGTTGATGAA+GGG	0.563961	4.4:-9672871	MS.gene28160:CDS
GTAGCTAATGACCTTAGTTG+GGG	0.568269	4.4:-9671861	MS.gene28160:CDS
GGATGAGCCTCCGGTGAGGA+TGG	0.570432	4.4:-9674358	MS.gene28160:CDS
TGCAGGGCAGTCTTATACTG+GGG	0.572559	4.4:-9671808	MS.gene28160:CDS
ACTGCGTCGATCCCATGCTT+CGG	0.573705	4.4:+9672547	None:intergenic
GGAGCTGGCGCGTTGTAGCG+GGG	0.580346	4.4:-9672112	MS.gene28160:CDS
GAAATGTGAAATCAAAGAGT+GGG	0.580566	4.4:-9671715	MS.gene28160:CDS
TGTGACGATGGATGAGCCTC+CGG	0.581185	4.4:-9674367	None:intergenic
ATGGTGGCTATAGTTGGCCA+TGG	0.581673	4.4:-9674339	MS.gene28160:CDS
CGCTGTTACAAACGAAGAGT+CGG	0.585099	4.4:-9672759	MS.gene28160:CDS
CCGCGAAATTCAACCATTGG+AGG	0.586866	4.4:+9672197	None:intergenic
GCAAACTGTAACCGAAGCAT+GGG	0.587392	4.4:-9672558	MS.gene28160:CDS
ATGGAGCTGCTAAAGCTGCA+GGG	0.587852	4.4:-9671824	MS.gene28160:CDS
GAGGCACATATGGCTTAGTA+GGG	0.597220	4.4:+9672216	None:intergenic
AAGGCCAAATGGTATGGAGG+AGG	0.599053	4.4:-9671983	MS.gene28160:CDS
TAAGCCATATGTGCCTCCAA+TGG	0.599741	4.4:-9672210	MS.gene28160:CDS
ACTATAGCCACCATCCTCAC+CGG	0.601762	4.4:+9674348	None:intergenic
TCCCAAGAAGCAGAGTTGAG+AGG	0.610361	4.4:+9674306	None:intergenic
AACTGTATGTTGAAGAACTG+CGG	0.613073	4.4:-9672425	MS.gene28160:CDS
TGAGAGGGCTGACAGCTCCA+TGG	0.617554	4.4:+9674322	None:intergenic
GATTTGAAGAACAAATTAGG+AGG	0.621101	4.4:-9672674	MS.gene28160:CDS
CCCTCTGGAGTCCCTAATGG+AGG	0.622618	4.4:+9671657	None:intergenic
GTTGGTTAGAGAGTTTGCAA+TGG	0.622715	4.4:-9672133	MS.gene28160:CDS
TGAGCCTCCGGTGAGGATGG+TGG	0.634453	4.4:-9674355	MS.gene28160:CDS
ATTAGATTGAATGCACTCGT+CGG	0.634851	4.4:+9672829	None:intergenic
TTGAAGGCCAAATGGTATGG+AGG	0.635847	4.4:-9671986	MS.gene28160:CDS
CATATCCAAATGAAAGAGAG+AGG	0.645957	4.4:-9671761	MS.gene28160:CDS
AGAATAGCTGATATTGACAA+GGG	0.651578	4.4:+9672066	None:intergenic
CCTCCATTAGGGACTCCAGA+GGG	0.662863	4.4:-9671657	MS.gene28160:CDS
TAGAATAGCTGATATTGACA+AGG	0.664980	4.4:+9672065	None:intergenic
TCCTCCATTAGGGACTCCAG+AGG	0.675079	4.4:-9671658	MS.gene28160:CDS
CGATGGATGAGCCTCCGGTG+AGG	0.688939	4.4:-9674362	MS.gene28160:CDS
ACTCCAGAGAGAATTACTGA+AGG	0.689331	4.4:-9672801	MS.gene28160:CDS
ATAGCCACCATCCTCACCGG+AGG	0.702930	4.4:+9674351	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTAAATAAAAGAAATATGT+GGG	+	chr4.4:9672594-9672613	None:intergenic	10.0%
!!	TTATGATATATTAGTTAATT+AGG	+	chr4.4:9672547-9672566	None:intergenic	10.0%
!!	ATATATTAGTTAATTAGGTT+GGG	+	chr4.4:9672542-9672561	None:intergenic	15.0%
!!	ATTTCAATATAAAAATAGCT+TGG	+	chr4.4:9671804-9671823	None:intergenic	15.0%
!!	GATTAAATAAAAGAAATATG+TGG	+	chr4.4:9672595-9672614	None:intergenic	15.0%
!!	TTATATCCTTATATAAAAAC+AGG	+	chr4.4:9671747-9671766	None:intergenic	15.0%
!!!	GATCTTTTTTCTTTATTTAT+AGG	-	chr4.4:9672486-9672505	MS.gene28160:CDS	15.0%
!!!	TTATTTTATTTATCCAAACA+GGG	+	chr4.4:9671877-9671896	None:intergenic	15.0%
!!!	TTTATTTTATTTATCCAAAC+AGG	+	chr4.4:9671878-9671897	None:intergenic	15.0%
!!	AAGCATATTTGGAAAAATAT+TGG	-	chr4.4:9673338-9673357	MS.gene28160:intron	20.0%
!!	ACAACTTATATGAAAACATT+TGG	+	chr4.4:9671903-9671922	None:intergenic	20.0%
!!	ACTCAATAAAGTTATACATA+AGG	-	chr4.4:9672066-9672085	MS.gene28160:CDS	20.0%
!!	AGCATATTTGGAAAAATATT+GGG	-	chr4.4:9673339-9673358	MS.gene28160:intron	20.0%
!!	GATATATTAGTTAATTAGGT+TGG	+	chr4.4:9672543-9672562	None:intergenic	20.0%
!!	TACTAATCAATGCTTATATA+AGG	-	chr4.4:9673466-9673485	MS.gene28160:intron	20.0%
!!	TATTTCAGTGTATTAGATAA+TGG	-	chr4.4:9674044-9674063	MS.gene28160:intron	20.0%
!!	TTATGAAACTCATTTGAATT+TGG	+	chr4.4:9672096-9672115	None:intergenic	20.0%
!!!	CTATAACCTGTTTTTATATA+AGG	-	chr4.4:9671738-9671757	MS.gene28160:CDS	20.0%
!!!	TTATTTCTTTCAAATTTGCT+TGG	-	chr4.4:9672648-9672667	MS.gene28160:CDS	20.0%
!!!	TTGACTATTTTCTTACTTAT+GGG	-	chr4.4:9672766-9672785	MS.gene28160:CDS	20.0%
!!!	TTTGACTATTTTCTTACTTA+TGG	-	chr4.4:9672765-9672784	MS.gene28160:CDS	20.0%
!	AAGATGTTTATTAACGTAGA+AGG	-	chr4.4:9672464-9672483	MS.gene28160:CDS	25.0%
!	AGTTAATTCTCAAATCTTTG+AGG	+	chr4.4:9672378-9672397	None:intergenic	25.0%
!	ATTTAATGTTCCCTTTAATC+AGG	-	chr4.4:9673062-9673081	MS.gene28160:intron	25.0%
!	CTAGATTTGAAGAACAAATT+AGG	-	chr4.4:9673285-9673304	MS.gene28160:intron	25.0%
!	GAAAAATAATTGTCTTGAGT+TGG	-	chr4.4:9673713-9673732	MS.gene28160:intron	25.0%
!	GCATATTTGGAAAAATATTG+GGG	-	chr4.4:9673340-9673359	MS.gene28160:intron	25.0%
!	GTATAACTTTATTGAGTCTA+CGG	+	chr4.4:9672063-9672082	None:intergenic	25.0%
!	GTTGTAAAGCTATCATTTAA+AGG	-	chr4.4:9672919-9672938	MS.gene28160:intron	25.0%
!	TAATTACATACTTGATCAAC+AGG	+	chr4.4:9673633-9673652	None:intergenic	25.0%
!	TATAACTTTATTGAGTCTAC+GGG	+	chr4.4:9672062-9672081	None:intergenic	25.0%
!	TCCAAATTAATGATCCAAAT+TGG	-	chr4.4:9674348-9674367	MS.gene28160:CDS	25.0%
!	TCCAATTTGGATCATTAATT+TGG	+	chr4.4:9674352-9674371	None:intergenic	25.0%
!	TCTACGTTAATAAACATCTT+TGG	+	chr4.4:9672464-9672483	None:intergenic	25.0%
!	TGATTAAAGGGAACATTAAA+TGG	+	chr4.4:9673063-9673082	None:intergenic	25.0%
!	TTACATACTTTAGCAAATCA+TGG	-	chr4.4:9672263-9672282	MS.gene28160:CDS	25.0%
!!	AAATTTATTGTAGTTTGTGG+TGG	-	chr4.4:9672168-9672187	MS.gene28160:CDS	25.0%
!!	AATCTTTTTGCCTGATTAAA+GGG	+	chr4.4:9673075-9673094	None:intergenic	25.0%
!!	TTTCAGGTAAAAACATTTGA+AGG	-	chr4.4:9673960-9673979	MS.gene28160:intron	25.0%
!!!	AACAAGTTGAAATTAGCTTT+TGG	+	chr4.4:9672902-9672921	None:intergenic	25.0%
!!!	AATGATTTTACTGGCTAAAA+CGG	+	chr4.4:9672570-9672589	None:intergenic	25.0%
!!!	GAGTTATTTCAAATGAGTTT+TGG	-	chr4.4:9674066-9674085	MS.gene28160:intron	25.0%
	AAAAACATTTGAAGGCCAAA+TGG	-	chr4.4:9673968-9673987	MS.gene28160:intron	30.0%
	AGAAAATATAGGGTTAAGAG+AGG	-	chr4.4:9674002-9674021	MS.gene28160:intron	30.0%
	AGAAATGTGAAATCAAAGAG+TGG	-	chr4.4:9674246-9674265	MS.gene28160:intron	30.0%
	AGAATAGCTGATATTGACAA+GGG	+	chr4.4:9673899-9673918	None:intergenic	30.0%
	AGTAAGCTGAAAACAACTTA+TGG	-	chr4.4:9671960-9671979	MS.gene28160:CDS	30.0%
	AGTGCAATAATATAGTGAGA+TGG	-	chr4.4:9672144-9672163	MS.gene28160:CDS	30.0%
	ATCAGGCAAAAAGATTGAAA+TGG	-	chr4.4:9673079-9673098	MS.gene28160:intron	30.0%
	ATTGAAAAACTTGAGAGCAA+AGG	-	chr4.4:9673500-9673519	MS.gene28160:intron	30.0%
	ATTGAGAAGCTTATCCAAAA+AGG	-	chr4.4:9672996-9673015	MS.gene28160:intron	30.0%
	CAATATCAGCTATTCTATAG+AGG	-	chr4.4:9673903-9673922	MS.gene28160:intron	30.0%
	CACTATTTCATATGAGTCTT+TGG	+	chr4.4:9673385-9673404	None:intergenic	30.0%
	GAAATGTGAAATCAAAGAGT+GGG	-	chr4.4:9674247-9674266	MS.gene28160:intron	30.0%
	GAAGGCAATAATATAATGTG+CGG	-	chr4.4:9672201-9672220	MS.gene28160:CDS	30.0%
	GAGATTCACAATGAAGTAAA+GGG	-	chr4.4:9673315-9673334	MS.gene28160:intron	30.0%
	GATTTGAAGAACAAATTAGG+AGG	-	chr4.4:9673288-9673307	MS.gene28160:intron	30.0%
	GGGAAATTTATTGTAGTTTG+TGG	-	chr4.4:9672165-9672184	MS.gene28160:CDS	30.0%
	GTGCAATAATATAGTGAGAT+GGG	-	chr4.4:9672145-9672164	MS.gene28160:CDS	30.0%
	TAGAATAGCTGATATTGACA+AGG	+	chr4.4:9673900-9673919	None:intergenic	30.0%
	TCACTATATTATTGCACTCT+TGG	+	chr4.4:9672142-9672161	None:intergenic	30.0%
	TCAGGCAAAAAGATTGAAAT+GGG	-	chr4.4:9673080-9673099	MS.gene28160:intron	30.0%
	TCCAAAAAGGTTCATACTAA+CGG	-	chr4.4:9673009-9673028	MS.gene28160:intron	30.0%
	TCTATAGAGGAAAAGCAAAA+GGG	-	chr4.4:9673916-9673935	MS.gene28160:intron	30.0%
	TGAGATTCACAATGAAGTAA+AGG	-	chr4.4:9673314-9673333	MS.gene28160:intron	30.0%
	TTCTATAGAGGAAAAGCAAA+AGG	-	chr4.4:9673915-9673934	MS.gene28160:intron	30.0%
	TTGAAAAACTTGAGAGCAAA+GGG	-	chr4.4:9673501-9673520	MS.gene28160:intron	30.0%
!	ATTGCAGAAGATTTGTTTGT+TGG	-	chr4.4:9673807-9673826	MS.gene28160:intron	30.0%
!	CAATCTTTTTGCCTGATTAA+AGG	+	chr4.4:9673076-9673095	None:intergenic	30.0%
!	TATGTGGGTAATGATTTTAC+TGG	+	chr4.4:9672579-9672598	None:intergenic	30.0%
!	TGAAGAGCTTTTCTACAATT+AGG	+	chr4.4:9673591-9673610	None:intergenic	30.0%
!!	AAGTTTTTCAATACTGGAAC+TGG	+	chr4.4:9673492-9673511	None:intergenic	30.0%
!!	AATGTTTTTACCTGAAACAC+CGG	+	chr4.4:9673957-9673976	None:intergenic	30.0%
!!	GTCATAATAGTTTTGCTAGA+GGG	-	chr4.4:9672736-9672755	MS.gene28160:CDS	30.0%
!!	TGTCATAATAGTTTTGCTAG+AGG	-	chr4.4:9672735-9672754	MS.gene28160:CDS	30.0%
!!	TTTAAGTTCTAAAGTGCCAA+TGG	-	chr4.4:9672839-9672858	MS.gene28160:CDS	30.0%
!!!	AAATGAGTTTTGGACAATTG+TGG	-	chr4.4:9674076-9674095	MS.gene28160:intron	30.0%
!!!	GTCTTTGGTTTTATCTAACT+CGG	+	chr4.4:9673370-9673389	None:intergenic	30.0%
	AAAATCCAAAGACATGTTGC+AGG	+	chr4.4:9672435-9672454	None:intergenic	35.0%
	AACTGTATGTTGAAGAACTG+CGG	-	chr4.4:9673537-9673556	MS.gene28160:intron	35.0%
	ATATAGGGTTAAGAGAGGTA+AGG	-	chr4.4:9674007-9674026	MS.gene28160:intron	35.0%
	ATGGAGGAGGAGAAAATATA+GGG	-	chr4.4:9673992-9674011	MS.gene28160:intron	35.0%
	ATGTAGCTAATGACCTTAGT+TGG	-	chr4.4:9674099-9674118	MS.gene28160:intron	35.0%
	ATTAGATTGAATGCACTCGT+CGG	+	chr4.4:9673136-9673155	None:intergenic	35.0%
	CATATCCAAATGAAAGAGAG+AGG	-	chr4.4:9674201-9674220	MS.gene28160:intron	35.0%
	GCGGATATAACAGTAAAATC+TGG	-	chr4.4:9672220-9672239	MS.gene28160:CDS	35.0%
	GTTAAGAGAGGTAAGGTATA+TGG	-	chr4.4:9674014-9674033	MS.gene28160:intron	35.0%
	TATGGAGGAGGAGAAAATAT+AGG	-	chr4.4:9673991-9674010	MS.gene28160:intron	35.0%
	TCAGGTACTTAATTGCTTGT+TGG	-	chr4.4:9673563-9673582	MS.gene28160:intron	35.0%
	TGTAGCTAATGACCTTAGTT+GGG	-	chr4.4:9674100-9674119	MS.gene28160:intron	35.0%
	TTGGAATAGCATGATTCACA+AGG	-	chr4.4:9672292-9672311	MS.gene28160:CDS	35.0%
!	CAGAAGATTTGTTTGTTGGT+TGG	-	chr4.4:9673811-9673830	MS.gene28160:intron	35.0%
!	GAAAAGCAAAAGGGTCTTTT+TGG	-	chr4.4:9673925-9673944	MS.gene28160:intron	35.0%
!	GAAGTAAAGGGAAGCATATT+TGG	-	chr4.4:9673327-9673346	MS.gene28160:intron	35.0%
!	TAGCAAATCATGGATTGTGT+TGG	-	chr4.4:9672273-9672292	MS.gene28160:CDS	35.0%
!	TCCGTTAGTATGAACCTTTT+TGG	+	chr4.4:9673013-9673032	None:intergenic	35.0%
!!	AGATTGAAATGGGTTGATGA+AGG	-	chr4.4:9673090-9673109	MS.gene28160:intron	35.0%
!!	GATTGAAATGGGTTGATGAA+GGG	-	chr4.4:9673091-9673110	MS.gene28160:intron	35.0%
!!	GCTCTCAAGTTTTTCAATAC+TGG	+	chr4.4:9673498-9673517	None:intergenic	35.0%
	ACTCCAGAGAGAATTACTGA+AGG	-	chr4.4:9673161-9673180	MS.gene28160:intron	40.0%
	CAAGGGAATTGATCATATGC+TGG	+	chr4.4:9673882-9673901	None:intergenic	40.0%
	CATGATTCACAAGGAAACAC+AGG	-	chr4.4:9672301-9672320	MS.gene28160:CDS	40.0%
	CATTTGAAGGCCAAATGGTA+TGG	-	chr4.4:9673973-9673992	MS.gene28160:intron	40.0%
	GAATGAAAACTTGAACCCTC+TGG	+	chr4.4:9674323-9674342	None:intergenic	40.0%
	GTAGCTAATGACCTTAGTTG+GGG	-	chr4.4:9674101-9674120	MS.gene28160:intron	40.0%
	GTTGGTTAGAGAGTTTGCAA+TGG	-	chr4.4:9673829-9673848	MS.gene28160:intron	40.0%
	TCATTTGGATATGCTCCATC+TGG	+	chr4.4:9674194-9674213	None:intergenic	40.0%
	TCTATACTGTAGACCCTGTT+TGG	-	chr4.4:9671861-9671880	MS.gene28160:CDS	40.0%
	TTCGTCCTCTCTCTTTCATT+TGG	+	chr4.4:9674209-9674228	None:intergenic	40.0%
	TTTCGTATGAAGCGATGCAT+CGG	+	chr4.4:9673656-9673675	None:intergenic	40.0%
!	CATGCATTGATCCTCCATTA+GGG	-	chr4.4:9674294-9674313	MS.gene28160:CDS	40.0%
!	CTATCATCTAGCTTCTCCAT+TGG	+	chr4.4:9672858-9672877	None:intergenic	40.0%
!	TCATGCATTGATCCTCCATT+AGG	-	chr4.4:9674293-9674312	MS.gene28160:CDS	40.0%
!	TTCAGTAATTCTCTCTGGAG+TGG	+	chr4.4:9673162-9673181	None:intergenic	40.0%
!	TTCATACGAAAGTGCGAATC+TGG	-	chr4.4:9673665-9673684	MS.gene28160:intron	40.0%
!	TTGAGTCTACGGGTATGTTT+TGG	+	chr4.4:9672052-9672071	None:intergenic	40.0%
!!	AGGGTCTTTTTGGTATGAAC+CGG	-	chr4.4:9673935-9673954	MS.gene28160:intron	40.0%
	AGTGGAACAAACCCCAACTA+AGG	+	chr4.4:9674115-9674134	None:intergenic	45.0%
	CAAACGAAGAGTCGGTTAAC+TGG	-	chr4.4:9673211-9673230	MS.gene28160:intron	45.0%
	CAGCCTTCAGTAATTCTCTC+TGG	+	chr4.4:9673167-9673186	None:intergenic	45.0%
	CCTCCAATGGTTGAATTTCG+CGG	-	chr4.4:9673765-9673784	MS.gene28160:intron	45.0%
	CGCTGTTACAAACGAAGAGT+CGG	-	chr4.4:9673203-9673222	MS.gene28160:intron	45.0%
	CTCCAATGGTTGAATTTCGC+GGG	-	chr4.4:9673766-9673785	MS.gene28160:intron	45.0%
	CTGTAACACGCAAAGCGAAA+AGG	+	chr4.4:9673694-9673713	None:intergenic	45.0%
	CTTTAGCAGCTCCATGATAG+TGG	+	chr4.4:9674133-9674152	None:intergenic	45.0%
	GAGGCACATATGGCTTAGTA+GGG	+	chr4.4:9673749-9673768	None:intergenic	45.0%
	GCAAACTGTAACCGAAGCAT+GGG	-	chr4.4:9673404-9673423	MS.gene28160:intron	45.0%
	TAAGCCATATGTGCCTCCAA+TGG	-	chr4.4:9673752-9673771	MS.gene28160:intron	45.0%
	TAGAGAGTTTGCAATGGAGC+TGG	-	chr4.4:9673835-9673854	MS.gene28160:intron	45.0%
	TGCAAACTGTAACCGAAGCA+TGG	-	chr4.4:9673403-9673422	MS.gene28160:intron	45.0%
	TGCAACCTGCAACATGTCTT+TGG	-	chr4.4:9672427-9672446	MS.gene28160:CDS	45.0%
	TTCTCCTCCTCCATACCATT+TGG	+	chr4.4:9673986-9674005	None:intergenic	45.0%
	TTGAAGGCCAAATGGTATGG+AGG	-	chr4.4:9673976-9673995	MS.gene28160:intron	45.0%
	TTGGTATGAACCGGTGTTTC+AGG	-	chr4.4:9673944-9673963	MS.gene28160:intron	45.0%
!	AATTTGCTTGGACAGCATGC+AGG	-	chr4.4:9672660-9672679	MS.gene28160:CDS	45.0%
!	GACGCAGTTCTGACGATATA+CGG	-	chr4.4:9673430-9673449	MS.gene28160:intron	45.0%
!	GCAGTACTTGTTAGTCCAGA+TGG	-	chr4.4:9674176-9674195	MS.gene28160:intron	45.0%
!	TCAACCATTGGAGGCACATA+TGG	+	chr4.4:9673759-9673778	None:intergenic	45.0%
!	TGGGGTTTGTTCCACTATCA+TGG	-	chr4.4:9674119-9674138	MS.gene28160:intron	45.0%
!	TGTGGTGGAGAAGAAAGAGA+AGG	-	chr4.4:9672183-9672202	MS.gene28160:CDS	45.0%
	AAGGCCAAATGGTATGGAGG+AGG	-	chr4.4:9673979-9673998	MS.gene28160:intron	50.0%
	ACTATAGCCACCATCCTCAC+CGG	+	chr4.4:9671617-9671636	None:intergenic	50.0%
	ATGGAGCTGCTAAAGCTGCA+GGG	-	chr4.4:9674138-9674157	MS.gene28160:intron	50.0%
	ATGGTGGCTATAGTTGGCCA+TGG	-	chr4.4:9671623-9671642	MS.gene28160:CDS	50.0%
	CCCAAGAAGCAGAGTTGAGA+GGG	+	chr4.4:9671658-9671677	None:intergenic	50.0%
	CCCTCTCAACTCTGCTTCTT+GGG	-	chr4.4:9671655-9671674	MS.gene28160:CDS	50.0%
	CCGCGAAATTCAACCATTGG+AGG	+	chr4.4:9673768-9673787	None:intergenic	50.0%
	TCCCAAGAAGCAGAGTTGAG+AGG	+	chr4.4:9671659-9671678	None:intergenic	50.0%
	TGCCCGCGAAATTCAACCAT+TGG	+	chr4.4:9673771-9673790	None:intergenic	50.0%
!	CTGCAGGGCAGTCTTATACT+GGG	-	chr4.4:9674153-9674172	MS.gene28160:intron	50.0%
!	GGAGGCACATATGGCTTAGT+AGG	+	chr4.4:9673750-9673769	None:intergenic	50.0%
!	GTGAGGATGGTGGCTATAGT+TGG	-	chr4.4:9671617-9671636	MS.gene28160:CDS	50.0%
!	TGCAGGGCAGTCTTATACTG+GGG	-	chr4.4:9674154-9674173	MS.gene28160:intron	50.0%
	CATGGAGCTGCTAAAGCTGC+AGG	-	chr4.4:9674137-9674156	MS.gene28160:intron	55.0%
	CCTCCATTAGGGACTCCAGA+GGG	-	chr4.4:9674305-9674324	MS.gene28160:CDS	55.0%
	GCCCTCTCAACTCTGCTTCT+TGG	-	chr4.4:9671654-9671673	MS.gene28160:CDS	55.0%
	GTTGAAGAACTGCGGTCGTC+AGG	-	chr4.4:9673545-9673564	MS.gene28160:intron	55.0%
	TCCTCCATTAGGGACTCCAG+AGG	-	chr4.4:9674304-9674323	MS.gene28160:CDS	55.0%
!	ACTGCGTCGATCCCATGCTT+CGG	+	chr4.4:9673418-9673437	None:intergenic	55.0%
!	GCTGCAGGGCAGTCTTATAC+TGG	-	chr4.4:9674152-9674171	MS.gene28160:intron	55.0%
!!	GAACCCTCTGGAGTCCCTAA+TGG	+	chr4.4:9674311-9674330	None:intergenic	55.0%
	ATAGCCACCATCCTCACCGG+AGG	+	chr4.4:9671614-9671633	None:intergenic	60.0%
	ATGGAGCTGGCGCGTTGTAG+CGG	-	chr4.4:9673848-9673867	MS.gene28160:intron	60.0%
	TGAGAGGGCTGACAGCTCCA+TGG	+	chr4.4:9671643-9671662	None:intergenic	60.0%
!!	CCCTCTGGAGTCCCTAATGG+AGG	+	chr4.4:9674308-9674327	None:intergenic	60.0%
	GGATGAGCCTCCGGTGAGGA+TGG	-	chr4.4:9671604-9671623	MS.gene28160:CDS	65.0%
	TGAGCCTCCGGTGAGGATGG+TGG	-	chr4.4:9671607-9671626	MS.gene28160:CDS	65.0%
	TGGAGCTGGCGCGTTGTAGC+GGG	-	chr4.4:9673849-9673868	MS.gene28160:intron	65.0%
	GGAGCTGGCGCGTTGTAGCG+GGG	-	chr4.4:9673850-9673869	MS.gene28160:intron	70.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.4	gene	9671602	9674382	9671602	ID=MS.gene28160
chr4.4	mRNA	9671602	9674382	9671602	ID=MS.gene28160.t1;Parent=MS.gene28160
chr4.4	exon	9674287	9674382	9674287	ID=MS.gene28160.t1.exon1;Parent=MS.gene28160.t1
chr4.4	CDS	9674287	9674382	9674287	ID=cds.MS.gene28160.t1;Parent=MS.gene28160.t1
chr4.4	exon	9671602	9672900	9671602	ID=MS.gene28160.t1.exon2;Parent=MS.gene28160.t1
chr4.4	CDS	9671602	9672900	9671602	ID=cds.MS.gene28160.t1;Parent=MS.gene28160.t1

Gene Sequence

>MS.gene28160

ATGGATGAGCCTCCGGTGAGGATGGTGGCTATAGTTGGCCATGGAGCTGTCAGCCCTCTCAACTCTGCTTCTTGGGAACAAGTCATGCTTCATACTGTTAAGTATCTTGAACTTTCTAACAAGTACTTATTATTATCTATAACCTGTTTTTATATAAGGATATAATATTTGTTGAATAATTTTTATATGATTATTAGTTCCAAGCTATTTTTATATTGAAATAAGTTGAAAATTGCAAATGACATGTAATTAGATATTGTCTATACTGTAGACCCTGTTTGGATAAATAAAATAAAGTCCAAATGTTTTCATATAAGTTGTAAGTTGTTTTCATAAGCTATCTTGAAGAGCTTGTGTAAGTAAGCTGAAAACAACTTATGGACATGTCGTAAGTTATTAACAGTCTCACAAACACTTGTATAAGTAGATAAGCTCAAATAAGTCATTCCAAAACATACCCGTAGACTCAATAAAGTTATACATAAGGTTATCCAAATTCAAATGAGTTTCATAAGTTTCATGTCACAAGTATGTAATCCAAGAGTGCAATAATATAGTGAGATGGGAAATTTATTGTAGTTTGTGGTGGAGAAGAAAGAGAAGGCAATAATATAATGTGCGGATATAACAGTAAAATCTGGAGCACATAAAGTTTAGTTTCTTACATACTTTAGCAAATCATGGATTGTGTTGGAATAGCATGATTCACAAGGAAACACAGGCAAACAATAGACAAATCTTATTCTGAATTAGCTTCTTATCAATAGAATTTTCCTCAAAGATTTGAGAATTAACTAAGAAAATATGAAGAACTGATTTAGAACTTGCAACCTGCAACATGTCTTTGGATTTTCAAGATCCAAAGATGTTTATTAACGTAGAAGGATCTTTTTTCTTTATTTATAGGCAACATTGTTTTATCATTTCTATCAAGTAACCCAACCTAATTAACTAATATATCATAACCGTTTTAGCCAGTAAAATCATTACCCACATATTTCTTTTATTTAATCAAGTGTCAGTGCTTTTGATATTATTATTACAGCTTATTTCTTTCAAATTTGCTTGGACAGCATGCAGGTTTTAAATATTTATTTTCATGTGATTCATCTTTTGCTAGAACTTTAGTGTGTTGTCATAATAGTTTTGCTAGAGGGTTAGTTTTTGACTATTTTCTTACTTATGGGAGTATCTCAAATAAAATAAGTATTTTGTTCTTCATTTTTGAAAAAAGCTCTTTAAGTTCTAAAGTGCCAATGGAGAAGCTAGATGATAGATGTTTATGAAAAATTGAGATCCAAAAGCTAATTTCAACTTGTTGTAAAGCTATCATTTAAAGGATTGTTTGTAGTCATTGCAAAATTCTTTCAACTTTTCTTTTCTTATAAGTGTTTATTGAGAAGCTTATCCAAAAAGGTTCATACTAACGGAGTGATTAATTTTTATGTTTGCTTCTTGCCATTTAATGTTCCCTTTAATCAGGCAAAAAGATTGAAATGGGTTGATGAAGGGTATGAACTTCTTGTATTTACCGACGAGTGCATTCAATCTAATGAACCACTCCAGAGAGAATTACTGAAGGCTGATATATTAGTGATTGTCGCTGTTACAAACGAAGAGTCGGTTAACTGGATTAAAATCAGCAGCAAAACTATTGAAAATGTAATATGCTTTGACTCTTCACTAGATTTGAAGAACAAATTAGGAGGCTATGAGATTCACAATGAAGTAAAGGGAAGCATATTTGGAAAAATATTGGGGAGTTCCGAGTTAGATAAAACCAAAGACTCATATGAAATAGTGCAAACTGTAACCGAAGCATGGGATCGACGCAGTTCTGACGATATACGGTTCTGTTTGCTGTTACTAATCAATGCTTATATAAGGCCAGTTCCAGTATTGAAAAACTTGAGAGCAAAGGGTTTTTCAACTTTAAACTGTATGTTGAAGAACTGCGGTCGTCAGGTACTTAATTGCTTGTTGGATCCTAATTGTAGAAAAGCTCTTCAATGTCTGAATAAGTGTAGTCCTGTTGATCAAGTATGTAATTACCGATGCATCGCTTCATACGAAAGTGCGAATCTGGAAGCCTTTTCGCTTTGCGTGTTACAGAAAAATAATTGTCTTGAGTTGGAAGCAGAAGTCCCTACTAAGCCATATGTGCCTCCAATGGTTGAATTTCGCGGGCAGAACTTGAGTCATGAAATTGCAGAAGATTTGTTTGTTGGTTGGTTAGAGAGTTTGCAATGGAGCTGGCGCGTTGTAGCGGGGCAGAATCCAGCATATGATCAATTCCCTTGTCAATATCAGCTATTCTATAGAGGAAAAGCAAAAGGGTCTTTTTGGTATGAACCGGTGTTTCAGGTAAAAACATTTGAAGGCCAAATGGTATGGAGGAGGAGAAAATATAGGGTTAAGAGAGGTAAGGTATATGGCACATTCTATTTCAGTGTATTAGATAATGGAGTTATTTCAAATGAGTTTTGGACAATTGTGGATGTAGCTAATGACCTTAGTTGGGGTTTGTTCCACTATCATGGAGCTGCTAAAGCTGCAGGGCAGTCTTATACTGGGGCAGTACTTGTTAGTCCAGATGGAGCATATCCAAATGAAAGAGAGAGGACGAAAATTGTTGCTGCACTAGAGAAATGTGAAATCAAAGAGTGGGAGCTTTTCTTTGTTGACAATTGTTCATGCATTGATCCTCCATTAGGGACTCCAGAGGGTTCAAGTTTTCATTCTGTAGTCCAAATTAATGATCCAAATTGGATGAATGTGTGA

Protein sequence

>MS.gene28160.t1

MDEPPVRMVAIVGHGAVSPLNSASWEQVMLHTAKRLKWVDEGYELLVFTDECIQSNEPLQRELLKADILVIVAVTNEESVNWIKISSKTIENVICFDSSLDLKNKLGGYEIHNEVKGSIFGKILGSSELDKTKDSYEIVQTVTEAWDRRSSDDIRFCLLLLINAYIRPVPVLKNLRAKGFSTLNCMLKNCGRQVLNCLLDPNCRKALQCLNKCSPVDQVCNYRCIASYESANLEAFSLCVLQKNNCLELEAEVPTKPYVPPMVEFRGQNLSHEIAEDLFVGWLESLQWSWRVVAGQNPAYDQFPCQYQLFYRGKAKGSFWYEPVFQVKTFEGQMVWRRRKYRVKRGKVYGTFYFSVLDNGVISNEFWTIVDVANDLSWGLFHYHGAAKAAGQSYTGAVLVSPDGAYPNERERTKIVAALEKCEIKEWELFFVDNCSCIDPPLGTPEGSSFHSVVQINDPNWMNV