Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45532.t1 | XP_003597397.2 | 70 | 170 | 47 | 2 | 1 | 170 | 18 | 183 | 2.60E-37 | 165.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45532.t1 | Q2HS36 | 70.0 | 170 | 47 | 2 | 1 | 170 | 18 | 183 | 1.9e-37 | 165.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049284 | MS.gene45532 | 0.84019 | 1.01E-57 | -1.69E-46 |
| MS.gene049346 | MS.gene45532 | 0.813953 | 1.97E-51 | -1.69E-46 |
| MS.gene049351 | MS.gene45532 | 0.883734 | 3.49E-71 | -1.69E-46 |
| MS.gene049427 | MS.gene45532 | 0.829093 | 6.24E-55 | -1.69E-46 |
| MS.gene049491 | MS.gene45532 | 0.857569 | 1.49E-62 | -1.69E-46 |
| MS.gene049599 | MS.gene45532 | -0.80513 | 1.55E-49 | -1.69E-46 |
| MS.gene049614 | MS.gene45532 | 0.807736 | 4.37E-50 | -1.69E-46 |
| MS.gene049661 | MS.gene45532 | 0.86179 | 8.01E-64 | -1.69E-46 |
| MS.gene049662 | MS.gene45532 | 0.859694 | 3.46E-63 | -1.69E-46 |
| MS.gene049758 | MS.gene45532 | 0.888623 | 5.01E-73 | -1.69E-46 |
| MS.gene049760 | MS.gene45532 | 0.846988 | 1.54E-59 | -1.69E-46 |
| MS.gene050076 | MS.gene45532 | 0.879168 | 1.55E-69 | -1.69E-46 |
| MS.gene050099 | MS.gene45532 | 0.873943 | 9.94E-68 | -1.69E-46 |
| MS.gene050128 | MS.gene45532 | 0.819458 | 1.15E-52 | -1.69E-46 |
| MS.gene050231 | MS.gene45532 | 0.809845 | 1.55E-50 | -1.69E-46 |
| MS.gene050301 | MS.gene45532 | 0.906384 | 1.57E-80 | -1.69E-46 |
| MS.gene050397 | MS.gene45532 | 0.888651 | 4.89E-73 | -1.69E-46 |
| MS.gene050404 | MS.gene45532 | 0.839315 | 1.71E-57 | -1.69E-46 |
| MS.gene050406 | MS.gene45532 | 0.854574 | 1.12E-61 | -1.69E-46 |
| MS.gene050432 | MS.gene45532 | 0.847191 | 1.35E-59 | -1.69E-46 |
| MS.gene050464 | MS.gene45532 | 0.870192 | 1.76E-66 | -1.69E-46 |
| MS.gene050529 | MS.gene45532 | 0.888642 | 4.93E-73 | -1.69E-46 |
| MS.gene050558 | MS.gene45532 | 0.813258 | 2.80E-51 | -1.69E-46 |
| MS.gene050642 | MS.gene45532 | 0.805135 | 1.54E-49 | -1.69E-46 |
| MS.gene050670 | MS.gene45532 | 0.828681 | 7.86E-55 | -1.69E-46 |
| MS.gene050767 | MS.gene45532 | 0.829821 | 4.15E-55 | -1.69E-46 |
| MS.gene050770 | MS.gene45532 | 0.832281 | 1.03E-55 | -1.69E-46 |
| MS.gene050783 | MS.gene45532 | 0.805096 | 1.57E-49 | -1.69E-46 |
| MS.gene050812 | MS.gene45532 | 0.802163 | 6.39E-49 | -1.69E-46 |
| MS.gene05101 | MS.gene45532 | 0.918782 | 1.02E-86 | -1.69E-46 |
| MS.gene05105 | MS.gene45532 | 0.822362 | 2.47E-53 | -1.69E-46 |
| MS.gene051471 | MS.gene45532 | 0.895078 | 1.35E-75 | -1.69E-46 |
| MS.gene051582 | MS.gene45532 | 0.834609 | 2.71E-56 | -1.69E-46 |
| MS.gene051662 | MS.gene45532 | 0.831606 | 1.52E-55 | -1.69E-46 |
| MS.gene051663 | MS.gene45532 | 0.835967 | 1.23E-56 | -1.69E-46 |
| MS.gene051666 | MS.gene45532 | 0.80529 | 1.43E-49 | -1.69E-46 |
| MS.gene051860 | MS.gene45532 | 0.840393 | 8.93E-58 | -1.69E-46 |
| MS.gene051877 | MS.gene45532 | 0.839324 | 1.70E-57 | -1.69E-46 |
| MS.gene052077 | MS.gene45532 | 0.800335 | 1.51E-48 | -1.69E-46 |
| MS.gene052078 | MS.gene45532 | 0.976805 | 1.56E-142 | -1.69E-46 |
| MS.gene052178 | MS.gene45532 | 0.876339 | 1.51E-68 | -1.69E-46 |
| MS.gene052188 | MS.gene45532 | 0.8566 | 2.88E-62 | -1.69E-46 |
| MS.gene052207 | MS.gene45532 | 0.80977 | 1.61E-50 | -1.69E-46 |
| MS.gene052253 | MS.gene45532 | 0.857175 | 1.95E-62 | -1.69E-46 |
| MS.gene052287 | MS.gene45532 | 0.81095 | 8.93E-51 | -1.69E-46 |
| MS.gene052290 | MS.gene45532 | 0.828379 | 9.29E-55 | -1.69E-46 |
| MS.gene052310 | MS.gene45532 | 0.887082 | 1.95E-72 | -1.69E-46 |
| MS.gene052322 | MS.gene45532 | 0.846481 | 2.11E-59 | -1.69E-46 |
| MS.gene052326 | MS.gene45532 | 0.878964 | 1.83E-69 | -1.69E-46 |
| MS.gene052340 | MS.gene45532 | 0.862285 | 5.65E-64 | -1.69E-46 |
| MS.gene052481 | MS.gene45532 | 0.806024 | 1.01E-49 | -1.69E-46 |
| MS.gene052485 | MS.gene45532 | 0.838421 | 2.90E-57 | -1.69E-46 |
| MS.gene053009 | MS.gene45532 | 0.802002 | 6.90E-49 | -1.69E-46 |
| MS.gene053103 | MS.gene45532 | 0.819678 | 1.02E-52 | -1.69E-46 |
| MS.gene053209 | MS.gene45532 | 0.855755 | 5.10E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene45532 | 0.832717 | 8.06E-56 | -1.69E-46 |
| MS.gene053557 | MS.gene45532 | 0.853303 | 2.61E-61 | -1.69E-46 |
| MS.gene053836 | MS.gene45532 | 0.899355 | 2.15E-77 | -1.69E-46 |
| MS.gene053907 | MS.gene45532 | 0.838495 | 2.78E-57 | -1.69E-46 |
| MS.gene053928 | MS.gene45532 | 0.806752 | 7.06E-50 | -1.69E-46 |
| MS.gene053971 | MS.gene45532 | 0.82861 | 8.17E-55 | -1.69E-46 |
| MS.gene054011 | MS.gene45532 | 0.821655 | 3.60E-53 | -1.69E-46 |
| MS.gene054012 | MS.gene45532 | 0.804657 | 1.94E-49 | -1.69E-46 |
| MS.gene054013 | MS.gene45532 | 0.803422 | 3.51E-49 | -1.69E-46 |
| MS.gene054123 | MS.gene45532 | 0.847018 | 1.51E-59 | -1.69E-46 |
| MS.gene054376 | MS.gene45532 | 0.853015 | 3.16E-61 | -1.69E-46 |
| MS.gene054473 | MS.gene45532 | 0.840439 | 8.69E-58 | -1.69E-46 |
| MS.gene05455 | MS.gene45532 | 0.838445 | 2.86E-57 | -1.69E-46 |
| MS.gene054802 | MS.gene45532 | 0.849581 | 2.95E-60 | -1.69E-46 |
| MS.gene054803 | MS.gene45532 | 0.849742 | 2.66E-60 | -1.69E-46 |
| MS.gene054804 | MS.gene45532 | 0.850263 | 1.90E-60 | -1.69E-46 |
| MS.gene054955 | MS.gene45532 | 0.816931 | 4.29E-52 | -1.69E-46 |
| MS.gene054983 | MS.gene45532 | 0.821978 | 3.03E-53 | -1.69E-46 |
| MS.gene055116 | MS.gene45532 | 0.857652 | 1.41E-62 | -1.69E-46 |
| MS.gene055254 | MS.gene45532 | 0.848178 | 7.23E-60 | -1.69E-46 |
| MS.gene055277 | MS.gene45532 | 0.9077 | 3.82E-81 | -1.69E-46 |
| MS.gene055303 | MS.gene45532 | 0.819374 | 1.20E-52 | -1.69E-46 |
| MS.gene055390 | MS.gene45532 | 0.868319 | 7.13E-66 | -1.69E-46 |
| MS.gene055397 | MS.gene45532 | 0.825172 | 5.42E-54 | -1.69E-46 |
| MS.gene055412 | MS.gene45532 | 0.805438 | 1.33E-49 | -1.69E-46 |
| MS.gene055422 | MS.gene45532 | 0.917463 | 5.15E-86 | -1.69E-46 |
| MS.gene055428 | MS.gene45532 | 0.908426 | 1.73E-81 | -1.69E-46 |
| MS.gene055499 | MS.gene45532 | 0.822141 | 2.78E-53 | -1.69E-46 |
| MS.gene05553 | MS.gene45532 | 0.802765 | 4.80E-49 | -1.69E-46 |
| MS.gene055604 | MS.gene45532 | 0.841869 | 3.66E-58 | -1.69E-46 |
| MS.gene055712 | MS.gene45532 | 0.848882 | 4.62E-60 | -1.69E-46 |
| MS.gene055896 | MS.gene45532 | 0.838579 | 2.65E-57 | -1.69E-46 |
| MS.gene056191 | MS.gene45532 | 0.858876 | 6.10E-63 | -1.69E-46 |
| MS.gene056314 | MS.gene45532 | 0.810968 | 8.85E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene45532 | 0.858632 | 7.21E-63 | -1.69E-46 |
| MS.gene056410 | MS.gene45532 | 0.837741 | 4.35E-57 | -1.69E-46 |
| MS.gene056451 | MS.gene45532 | 0.821786 | 3.35E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene45532 | 0.853938 | 1.72E-61 | -1.69E-46 |
| MS.gene056612 | MS.gene45532 | 0.904602 | 1.03E-79 | -1.69E-46 |
| MS.gene056659 | MS.gene45532 | 0.814102 | 1.83E-51 | -1.69E-46 |
| MS.gene056796 | MS.gene45532 | 0.844909 | 5.64E-59 | -1.69E-46 |
| MS.gene056899 | MS.gene45532 | -0.821581 | 3.74E-53 | -1.69E-46 |
| MS.gene056931 | MS.gene45532 | 0.801701 | 7.95E-49 | -1.69E-46 |
| MS.gene057011 | MS.gene45532 | 0.81678 | 4.64E-52 | -1.69E-46 |
| MS.gene05702 | MS.gene45532 | 0.887541 | 1.30E-72 | -1.69E-46 |
| MS.gene057121 | MS.gene45532 | 0.868381 | 6.81E-66 | -1.69E-46 |
| MS.gene057123 | MS.gene45532 | 0.838095 | 3.52E-57 | -1.69E-46 |
| MS.gene057129 | MS.gene45532 | 0.824331 | 8.55E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene45532 | 0.819513 | 1.12E-52 | -1.69E-46 |
| MS.gene057245 | MS.gene45532 | 0.848089 | 7.65E-60 | -1.69E-46 |
| MS.gene057295 | MS.gene45532 | 0.869347 | 3.32E-66 | -1.69E-46 |
| MS.gene05733 | MS.gene45532 | 0.851461 | 8.74E-61 | -1.69E-46 |
| MS.gene057439 | MS.gene45532 | 0.876923 | 9.49E-69 | -1.69E-46 |
| MS.gene057448 | MS.gene45532 | 0.810539 | 1.10E-50 | -1.69E-46 |
| MS.gene057449 | MS.gene45532 | 0.808113 | 3.63E-50 | -1.69E-46 |
| MS.gene057450 | MS.gene45532 | 0.81996 | 8.83E-53 | -1.69E-46 |
| MS.gene057749 | MS.gene45532 | 0.819152 | 1.35E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene45532 | 0.813403 | 2.61E-51 | -1.69E-46 |
| MS.gene058002 | MS.gene45532 | 0.890927 | 6.32E-74 | -1.69E-46 |
| MS.gene058082 | MS.gene45532 | 0.844442 | 7.54E-59 | -1.69E-46 |
| MS.gene05811 | MS.gene45532 | 0.896173 | 4.76E-76 | -1.69E-46 |
| MS.gene058142 | MS.gene45532 | 0.844367 | 7.90E-59 | -1.69E-46 |
| MS.gene058233 | MS.gene45532 | 0.858543 | 7.66E-63 | -1.69E-46 |
| MS.gene058276 | MS.gene45532 | 0.86043 | 2.08E-63 | -1.69E-46 |
| MS.gene058293 | MS.gene45532 | 0.863702 | 2.06E-64 | -1.69E-46 |
| MS.gene058365 | MS.gene45532 | 0.831666 | 1.47E-55 | -1.69E-46 |
| MS.gene058660 | MS.gene45532 | 0.920724 | 8.90E-88 | -1.69E-46 |
| MS.gene058710 | MS.gene45532 | 0.805351 | 1.39E-49 | -1.69E-46 |
| MS.gene058749 | MS.gene45532 | 0.814468 | 1.52E-51 | -1.69E-46 |
| MS.gene058787 | MS.gene45532 | 0.829726 | 4.38E-55 | -1.69E-46 |
| MS.gene058845 | MS.gene45532 | 0.825877 | 3.69E-54 | -1.69E-46 |
| MS.gene05886 | MS.gene45532 | 0.844931 | 5.57E-59 | -1.69E-46 |
| MS.gene058928 | MS.gene45532 | 0.838699 | 2.46E-57 | -1.69E-46 |
| MS.gene058993 | MS.gene45532 | 0.844158 | 8.99E-59 | -1.69E-46 |
| MS.gene05907 | MS.gene45532 | 0.886952 | 2.18E-72 | -1.69E-46 |
| MS.gene059141 | MS.gene45532 | 0.805712 | 1.17E-49 | -1.69E-46 |
| MS.gene059228 | MS.gene45532 | 0.826853 | 2.16E-54 | -1.69E-46 |
| MS.gene059285 | MS.gene45532 | 0.815779 | 7.76E-52 | -1.69E-46 |
| MS.gene059294 | MS.gene45532 | 0.835311 | 1.81E-56 | -1.69E-46 |
| MS.gene059326 | MS.gene45532 | 0.874291 | 7.58E-68 | -1.69E-46 |
| MS.gene059342 | MS.gene45532 | 0.803233 | 3.84E-49 | -1.69E-46 |
| MS.gene059420 | MS.gene45532 | 0.800893 | 1.16E-48 | -1.69E-46 |
| MS.gene059518 | MS.gene45532 | 0.9019 | 1.68E-78 | -1.69E-46 |
| MS.gene059536 | MS.gene45532 | 0.831023 | 2.11E-55 | -1.69E-46 |
| MS.gene059597 | MS.gene45532 | 0.894382 | 2.60E-75 | -1.69E-46 |
| MS.gene05959 | MS.gene45532 | 0.821978 | 3.03E-53 | -1.69E-46 |
| MS.gene059676 | MS.gene45532 | 0.865326 | 6.41E-65 | -1.69E-46 |
| MS.gene059688 | MS.gene45532 | 0.858395 | 8.48E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene45532 | 0.869981 | 2.06E-66 | -1.69E-46 |
| MS.gene059695 | MS.gene45532 | 0.866338 | 3.07E-65 | -1.69E-46 |
| MS.gene059708 | MS.gene45532 | 0.8222 | 2.69E-53 | -1.69E-46 |
| MS.gene05984 | MS.gene45532 | 0.885496 | 7.73E-72 | -1.69E-46 |
| MS.gene059894 | MS.gene45532 | 0.899597 | 1.69E-77 | -1.69E-46 |
| MS.gene059960 | MS.gene45532 | 0.844698 | 6.44E-59 | -1.69E-46 |
| MS.gene059974 | MS.gene45532 | 0.82793 | 1.19E-54 | -1.69E-46 |
| MS.gene060005 | MS.gene45532 | 0.824247 | 8.95E-54 | -1.69E-46 |
| MS.gene06037 | MS.gene45532 | 0.872377 | 3.33E-67 | -1.69E-46 |
| MS.gene060403 | MS.gene45532 | 0.824002 | 1.02E-53 | -1.69E-46 |
| MS.gene060407 | MS.gene45532 | 0.838196 | 3.32E-57 | -1.69E-46 |
| MS.gene060476 | MS.gene45532 | 0.825896 | 3.65E-54 | -1.69E-46 |
| MS.gene060559 | MS.gene45532 | 0.806338 | 8.64E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene45532 | 0.809909 | 1.50E-50 | -1.69E-46 |
| MS.gene060818 | MS.gene45532 | 0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene06090 | MS.gene45532 | 0.829866 | 4.05E-55 | -1.69E-46 |
| MS.gene061049 | MS.gene45532 | 0.908989 | 9.35E-82 | -1.69E-46 |
| MS.gene061051 | MS.gene45532 | -0.845073 | 5.10E-59 | -1.69E-46 |
| MS.gene061112 | MS.gene45532 | 0.82272 | 2.04E-53 | -1.69E-46 |
| MS.gene061200 | MS.gene45532 | 0.818598 | 1.80E-52 | -1.69E-46 |
| MS.gene061265 | MS.gene45532 | 0.820858 | 5.49E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45532.t1 | MTR_2g097680 | 92.398 | 171 | 7 | 4 | 1 | 170 | 18 | 183 | 5.09e-80 | 235 |
| MS.gene45532.t1 | MTR_1g071380 | 90.643 | 171 | 8 | 6 | 1 | 170 | 1 | 164 | 8.29e-77 | 226 |
| MS.gene45532.t1 | MTR_2g097680 | 89.831 | 118 | 6 | 4 | 1 | 117 | 18 | 130 | 2.81e-57 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene45532.t1 | AT2G29180 | 41.772 | 158 | 75 | 5 | 20 | 163 | 5 | 159 | 4.46e-24 | 92.8 |
Find 29 sgRNAs with CRISPR-Local
Find 73 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGCTTATCCGTTATCACTAT+TGG | 0.245133 | 2.1:+6418811 | MS.gene45532:CDS |
| GCTTATCCGTTATCACTATT+GGG | 0.260636 | 2.1:+6418812 | MS.gene45532:CDS |
| TCTGGTTGTAGTAGTGATAA+TGG | 0.300412 | 2.1:-6418617 | None:intergenic |
| GAAAGGAAGGTTGCAATCTT+TGG | 0.300675 | 2.1:-6418520 | None:intergenic |
| GCTGTAGCAGCAACAGGATT+TGG | 0.334339 | 2.1:-6418676 | None:intergenic |
| TTCAAAGGAAGTCCAAACTA+TGG | 0.343791 | 2.1:+6418653 | MS.gene45532:CDS |
| CATTGATGCTTCGGAGCAAT+TGG | 0.360695 | 2.1:+6418720 | MS.gene45532:CDS |
| CTGGTTGTAGTAGTGATAAT+GGG | 0.369858 | 2.1:-6418616 | None:intergenic |
| AACAGGATTTGGCCATAGTT+TGG | 0.372494 | 2.1:-6418665 | None:intergenic |
| AAAAGAAAAGAAAAGTAGTA+AGG | 0.384781 | 2.1:+6419801 | MS.gene45532:CDS |
| AGGGCAGGACCTAAAGGATT+TGG | 0.404020 | 2.1:+6419821 | MS.gene45532:CDS |
| GAGAAAGATGAAGAAGTTGT+TGG | 0.423658 | 2.1:-6418592 | None:intergenic |
| TGCTACAGCCATTGATGCTT+CGG | 0.431580 | 2.1:+6418711 | MS.gene45532:CDS |
| TCAACAGCTGTAGCAGCAAC+AGG | 0.437132 | 2.1:-6418682 | None:intergenic |
| CAATTGCTCCGAAGCATCAA+TGG | 0.447559 | 2.1:-6418719 | None:intergenic |
| AGAAGATGATGTTGAAAGGA+AGG | 0.478894 | 2.1:-6418533 | None:intergenic |
| TCATCAACTACCACTGATGA+TGG | 0.480753 | 2.1:+6418745 | MS.gene45532:CDS |
| AAAGAAAAGAAAAGTAGTAA+GGG | 0.491413 | 2.1:+6419802 | MS.gene45532:CDS |
| AAGAAGAAGATGATGTTGAA+AGG | 0.496918 | 2.1:-6418537 | None:intergenic |
| GTAGTAAGGGCAGGACCTAA+AGG | 0.510055 | 2.1:+6419815 | MS.gene45532:CDS |
| CTTATCCGTTATCACTATTG+GGG | 0.525510 | 2.1:+6418813 | MS.gene45532:CDS |
| CATCAACTACCACTGATGAT+GGG | 0.525641 | 2.1:+6418746 | MS.gene45532:CDS |
| AAAAGAAAAGTAGTAAGGGC+AGG | 0.536130 | 2.1:+6419806 | MS.gene45532:CDS |
| ATATACCCCAATAGTGATAA+CGG | 0.550650 | 2.1:-6418818 | None:intergenic |
| TTTCTTGACAAAGAGAGAGA+AGG | 0.571247 | 2.1:+6419739 | MS.gene45532:CDS |
| ATCAACTACCACTGATGATG+GGG | 0.608198 | 2.1:+6418747 | MS.gene45532:CDS |
| AAGAGACACCCCATCATCAG+TGG | 0.647668 | 2.1:-6418755 | None:intergenic |
| GAGAAAGAAGAAGCAGCTAG+CGG | 0.687353 | 2.1:+6419770 | MS.gene45532:CDS |
| TGATGATGCAAATAATGCAG+TGG | 0.718262 | 2.1:-6418488 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CTCTATATTAATAAAAGAAT+TGG | - | chr2.1:6418878-6418897 | None:intergenic | 15.0% |
| !! | TATTCAAAATGAACTAATTA+GGG | - | chr2.1:6419227-6419246 | None:intergenic | 15.0% |
| !!! | AAATGATTATGAACTAATTT+TGG | - | chr2.1:6419200-6419219 | None:intergenic | 15.0% |
| !!! | AATAGAATTTTACAATATTG+AGG | + | chr2.1:6419243-6419262 | MS.gene45532:intron | 15.0% |
| !!! | CAATTCTTTTATTAATATAG+AGG | + | chr2.1:6418876-6418895 | MS.gene45532:intron | 15.0% |
| !!! | TTTTATAAATGTAAATGACT+TGG | + | chr2.1:6419587-6419606 | MS.gene45532:intron | 15.0% |
| !!! | TTTTTCGTTTTGTAATTTTA+TGG | + | chr2.1:6419447-6419466 | MS.gene45532:intron | 15.0% |
| !! | AAAAGAAAAGAAAAGTAGTA+AGG | + | chr2.1:6419801-6419820 | MS.gene45532:CDS | 20.0% |
| !! | AAAGAAAAGAAAAGTAGTAA+GGG | + | chr2.1:6419802-6419821 | MS.gene45532:CDS | 20.0% |
| !! | CTAAATTGATTATGAAAGTT+AGG | - | chr2.1:6419141-6419160 | None:intergenic | 20.0% |
| !! | CTATTCAAAATGAACTAATT+AGG | - | chr2.1:6419228-6419247 | None:intergenic | 20.0% |
| !!! | GAAAATCCATAATTTTTCAA+AGG | + | chr2.1:6418638-6418657 | MS.gene45532:CDS | 20.0% |
| !!! | TATTGACATTACATGTTTTA+GGG | + | chr2.1:6419070-6419089 | MS.gene45532:intron | 20.0% |
| !!! | TTATTGACATTACATGTTTT+AGG | + | chr2.1:6419069-6419088 | MS.gene45532:intron | 20.0% |
| !!! | TTGAAAAATTATGGATTTTC+TGG | - | chr2.1:6418638-6418657 | None:intergenic | 20.0% |
| !!! | TTGCGATTTTAATACATTAA+GGG | - | chr2.1:6419411-6419430 | None:intergenic | 20.0% |
| !!! | TTTGCGATTTTAATACATTA+AGG | - | chr2.1:6419412-6419431 | None:intergenic | 20.0% |
| ! | TTACTTAGCATTAGTATTCA+GGG | + | chr2.1:6419661-6419680 | MS.gene45532:intron | 25.0% |
| ! | TTAGTGAAAATTATTTCCCT+TGG | + | chr2.1:6418986-6419005 | MS.gene45532:intron | 25.0% |
| !! | TTTTGATCTTTGAATATGTG+AGG | - | chr2.1:6419553-6419572 | None:intergenic | 25.0% |
| AAGAAGAAGATGATGTTGAA+AGG | - | chr2.1:6418540-6418559 | None:intergenic | 30.0% | |
| AGTAAAAACGTGTGTTGAAA+TGG | - | chr2.1:6418567-6418586 | None:intergenic | 30.0% | |
| ATATACCCCAATAGTGATAA+CGG | - | chr2.1:6418821-6418840 | None:intergenic | 30.0% | |
| CACATATTTAGAGACCTAAA+TGG | - | chr2.1:6419370-6419389 | None:intergenic | 30.0% | |
| CTAGTTTATACTTTGTAGTG+TGG | - | chr2.1:6419044-6419063 | None:intergenic | 30.0% | |
| GTTACTTAGCATTAGTATTC+AGG | + | chr2.1:6419660-6419679 | MS.gene45532:intron | 30.0% | |
| TTTAGGTCTCTAAATATGTG+AGG | + | chr2.1:6419370-6419389 | MS.gene45532:intron | 30.0% | |
| ! | ATCTTTTGACCAAATCCTTT+AGG | - | chr2.1:6419833-6419852 | None:intergenic | 30.0% |
| ! | CCTCCTATCTAAAACTATTT+CGG | + | chr2.1:6419636-6419655 | MS.gene45532:intron | 30.0% |
| ! | CTTTTCTTCATTGCTTTCAT+TGG | + | chr2.1:6418790-6418809 | MS.gene45532:CDS | 30.0% |
| ! | GGACTTCCTTTGAAAAATTA+TGG | - | chr2.1:6418647-6418666 | None:intergenic | 30.0% |
| ! | TTTAAAGCAAACAGCCATTT+AGG | + | chr2.1:6419353-6419372 | MS.gene45532:intron | 30.0% |
| !! | TTTTTGTTTGTTTGTGTTGC+AGG | + | chr2.1:6419694-6419713 | MS.gene45532:intron | 30.0% |
| !!! | ACACCGAAATAGTTTTAGAT+AGG | - | chr2.1:6419642-6419661 | None:intergenic | 30.0% |
| AAAAGAAAAGTAGTAAGGGC+AGG | + | chr2.1:6419806-6419825 | MS.gene45532:CDS | 35.0% | |
| AGAAGATGATGTTGAAAGGA+AGG | - | chr2.1:6418536-6418555 | None:intergenic | 35.0% | |
| ATTCCATGTCATATTGTCCA+AGG | - | chr2.1:6419006-6419025 | None:intergenic | 35.0% | |
| CTGGTTGTAGTAGTGATAAT+GGG | - | chr2.1:6418619-6418638 | None:intergenic | 35.0% | |
| CTTATCCGTTATCACTATTG+GGG | + | chr2.1:6418813-6418832 | MS.gene45532:CDS | 35.0% | |
| GAGAAAGATGAAGAAGTTGT+TGG | - | chr2.1:6418595-6418614 | None:intergenic | 35.0% | |
| GCTTATCCGTTATCACTATT+GGG | + | chr2.1:6418812-6418831 | MS.gene45532:CDS | 35.0% | |
| TCTGGTTGTAGTAGTGATAA+TGG | - | chr2.1:6418620-6418639 | None:intergenic | 35.0% | |
| TTCAAAGGAAGTCCAAACTA+TGG | + | chr2.1:6418653-6418672 | MS.gene45532:CDS | 35.0% | |
| TTCCATGTCATATTGTCCAA+GGG | - | chr2.1:6419005-6419024 | None:intergenic | 35.0% | |
| TTGAGACATGCTTGCAATTT+CGG | - | chr2.1:6418913-6418932 | None:intergenic | 35.0% | |
| TTTCTTGACAAAGAGAGAGA+AGG | + | chr2.1:6419739-6419758 | MS.gene45532:CDS | 35.0% | |
| ! | TGATGATGCAAATAATGCAG+TGG | - | chr2.1:6418491-6418510 | None:intergenic | 35.0% |
| !!! | CCGAAATAGTTTTAGATAGG+AGG | - | chr2.1:6419639-6419658 | None:intergenic | 35.0% |
| AACAGGATTTGGCCATAGTT+TGG | - | chr2.1:6418668-6418687 | None:intergenic | 40.0% | |
| AATCGCAAACACATCTCTAG+TGG | + | chr2.1:6419423-6419442 | MS.gene45532:intron | 40.0% | |
| ACACATGCAGTCAACTTACT+AGG | - | chr2.1:6419166-6419185 | None:intergenic | 40.0% | |
| CACATGCAGTCAACTTACTA+GGG | - | chr2.1:6419165-6419184 | None:intergenic | 40.0% | |
| CATCAACTACCACTGATGAT+GGG | + | chr2.1:6418746-6418765 | MS.gene45532:CDS | 40.0% | |
| CTTAGCATTAGTATTCAGGG+AGG | + | chr2.1:6419664-6419683 | MS.gene45532:intron | 40.0% | |
| GAAAGGAAGGTTGCAATCTT+TGG | - | chr2.1:6418523-6418542 | None:intergenic | 40.0% | |
| GGCAAATGGTCACGATTTAA+AGG | + | chr2.1:6419303-6419322 | MS.gene45532:intron | 40.0% | |
| GGCTTATCCGTTATCACTAT+TGG | + | chr2.1:6418811-6418830 | MS.gene45532:CDS | 40.0% | |
| TCATCAACTACCACTGATGA+TGG | + | chr2.1:6418745-6418764 | MS.gene45532:CDS | 40.0% | |
| TTCCCTTGGACAATATGACA+TGG | + | chr2.1:6419000-6419019 | MS.gene45532:intron | 40.0% | |
| ! | AGTAAGTTGACTGCATGTGT+TGG | + | chr2.1:6419166-6419185 | MS.gene45532:intron | 40.0% |
| ! | ATCAACTACCACTGATGATG+GGG | + | chr2.1:6418747-6418766 | MS.gene45532:CDS | 40.0% |
| CATTGATGCTTCGGAGCAAT+TGG | + | chr2.1:6418720-6418739 | MS.gene45532:CDS | 45.0% | |
| GAGAAAGAAGAAGCAGCTAG+CGG | + | chr2.1:6419770-6419789 | MS.gene45532:CDS | 45.0% | |
| TGCTACAGCCATTGATGCTT+CGG | + | chr2.1:6418711-6418730 | MS.gene45532:CDS | 45.0% | |
| ! | CAATTGCTCCGAAGCATCAA+TGG | - | chr2.1:6418722-6418741 | None:intergenic | 45.0% |
| ! | GCCAAAACGAGTGACTAGTT+TGG | + | chr2.1:6419282-6419301 | MS.gene45532:intron | 45.0% |
| ! | GCCAAACTAGTCACTCGTTT+TGG | - | chr2.1:6419286-6419305 | None:intergenic | 45.0% |
| !! | CGAGTGACTAGTTTGGCAAA+TGG | + | chr2.1:6419289-6419308 | MS.gene45532:intron | 45.0% |
| AAGAGACACCCCATCATCAG+TGG | - | chr2.1:6418758-6418777 | None:intergenic | 50.0% | |
| AGGGCAGGACCTAAAGGATT+TGG | + | chr2.1:6419821-6419840 | MS.gene45532:CDS | 50.0% | |
| GCTGTAGCAGCAACAGGATT+TGG | - | chr2.1:6418679-6418698 | None:intergenic | 50.0% | |
| GTAGTAAGGGCAGGACCTAA+AGG | + | chr2.1:6419815-6419834 | MS.gene45532:CDS | 50.0% | |
| TCAACAGCTGTAGCAGCAAC+AGG | - | chr2.1:6418685-6418704 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 6418484 | 6419877 | 6418484 | ID=MS.gene45532 |
| chr2.1 | mRNA | 6418484 | 6419877 | 6418484 | ID=MS.gene45532.t1;Parent=MS.gene45532 |
| chr2.1 | exon | 6418484 | 6418834 | 6418484 | ID=MS.gene45532.t1.exon1;Parent=MS.gene45532.t1 |
| chr2.1 | CDS | 6418484 | 6418834 | 6418484 | ID=cds.MS.gene45532.t1;Parent=MS.gene45532.t1 |
| chr2.1 | exon | 6419716 | 6419877 | 6419716 | ID=MS.gene45532.t1.exon2;Parent=MS.gene45532.t1 |
| chr2.1 | CDS | 6419716 | 6419877 | 6419716 | ID=cds.MS.gene45532.t1;Parent=MS.gene45532.t1 |
| Gene Sequence |
| Protein sequence |
