Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58162.t1 | XP_003630122.2 | 97.8 | 464 | 9 | 1 | 2 | 464 | 66 | 529 | 3.40E-257 | 897.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58162.t1 | G7LBB8 | 97.8 | 464 | 9 | 1 | 2 | 464 | 66 | 529 | 2.4e-257 | 897.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049150 | MS.gene58162 | 0.817466 | 3.25E-52 | -1.69E-46 |
| MS.gene049153 | MS.gene58162 | 0.815517 | 8.88E-52 | -1.69E-46 |
| MS.gene049260 | MS.gene58162 | 0.801557 | 8.51E-49 | -1.69E-46 |
| MS.gene049284 | MS.gene58162 | 0.836767 | 7.72E-57 | -1.69E-46 |
| MS.gene049346 | MS.gene58162 | 0.802194 | 6.30E-49 | -1.69E-46 |
| MS.gene049351 | MS.gene58162 | 0.835466 | 1.65E-56 | -1.69E-46 |
| MS.gene049356 | MS.gene58162 | 0.843952 | 1.02E-58 | -1.69E-46 |
| MS.gene049369 | MS.gene58162 | 0.805379 | 1.37E-49 | -1.69E-46 |
| MS.gene049389 | MS.gene58162 | 0.817561 | 3.09E-52 | -1.69E-46 |
| MS.gene049427 | MS.gene58162 | 0.815488 | 9.01E-52 | -1.69E-46 |
| MS.gene049491 | MS.gene58162 | 0.859666 | 3.53E-63 | -1.69E-46 |
| MS.gene049661 | MS.gene58162 | 0.855284 | 7.00E-62 | -1.69E-46 |
| MS.gene049662 | MS.gene58162 | 0.845424 | 4.10E-59 | -1.69E-46 |
| MS.gene049758 | MS.gene58162 | 0.865869 | 4.32E-65 | -1.69E-46 |
| MS.gene049910 | MS.gene58162 | 0.813867 | 2.06E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene58162 | 0.844344 | 8.01E-59 | -1.69E-46 |
| MS.gene050099 | MS.gene58162 | 0.813355 | 2.67E-51 | -1.69E-46 |
| MS.gene050128 | MS.gene58162 | 0.852821 | 3.59E-61 | -1.69E-46 |
| MS.gene050301 | MS.gene58162 | 0.887719 | 1.11E-72 | -1.69E-46 |
| MS.gene050397 | MS.gene58162 | 0.841424 | 4.79E-58 | -1.69E-46 |
| MS.gene050404 | MS.gene58162 | 0.821651 | 3.61E-53 | -1.69E-46 |
| MS.gene050406 | MS.gene58162 | 0.828074 | 1.10E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene58162 | 0.849218 | 3.72E-60 | -1.69E-46 |
| MS.gene050464 | MS.gene58162 | 0.837731 | 4.37E-57 | -1.69E-46 |
| MS.gene050529 | MS.gene58162 | 0.874501 | 6.43E-68 | -1.69E-46 |
| MS.gene05053 | MS.gene58162 | 0.815201 | 1.04E-51 | -1.69E-46 |
| MS.gene050670 | MS.gene58162 | 0.852688 | 3.92E-61 | -1.69E-46 |
| MS.gene050767 | MS.gene58162 | 0.811081 | 8.37E-51 | -1.69E-46 |
| MS.gene050770 | MS.gene58162 | 0.812964 | 3.25E-51 | -1.69E-46 |
| MS.gene050812 | MS.gene58162 | 0.841583 | 4.35E-58 | -1.69E-46 |
| MS.gene05101 | MS.gene58162 | 0.860227 | 2.39E-63 | -1.69E-46 |
| MS.gene05105 | MS.gene58162 | 0.833631 | 4.77E-56 | -1.69E-46 |
| MS.gene051471 | MS.gene58162 | 0.868499 | 6.24E-66 | -1.69E-46 |
| MS.gene051582 | MS.gene58162 | 0.811418 | 7.07E-51 | -1.69E-46 |
| MS.gene051605 | MS.gene58162 | 0.804103 | 2.54E-49 | -1.69E-46 |
| MS.gene051666 | MS.gene58162 | 0.809888 | 1.51E-50 | -1.69E-46 |
| MS.gene051692 | MS.gene58162 | 0.801082 | 1.06E-48 | -1.69E-46 |
| MS.gene051860 | MS.gene58162 | 0.842364 | 2.71E-58 | -1.69E-46 |
| MS.gene051877 | MS.gene58162 | 0.815833 | 7.55E-52 | -1.69E-46 |
| MS.gene052077 | MS.gene58162 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene052078 | MS.gene58162 | 0.896953 | 2.25E-76 | -1.69E-46 |
| MS.gene052178 | MS.gene58162 | 0.851171 | 1.06E-60 | -1.69E-46 |
| MS.gene052188 | MS.gene58162 | 0.907068 | 7.55E-81 | -1.69E-46 |
| MS.gene052253 | MS.gene58162 | 0.848138 | 7.42E-60 | -1.69E-46 |
| MS.gene052287 | MS.gene58162 | 0.804251 | 2.36E-49 | -1.69E-46 |
| MS.gene052290 | MS.gene58162 | 0.819339 | 1.22E-52 | -1.69E-46 |
| MS.gene052310 | MS.gene58162 | 0.884139 | 2.48E-71 | -1.69E-46 |
| MS.gene052326 | MS.gene58162 | 0.839039 | 2.01E-57 | -1.69E-46 |
| MS.gene05233 | MS.gene58162 | -0.817847 | 2.67E-52 | -1.69E-46 |
| MS.gene052340 | MS.gene58162 | 0.895244 | 1.15E-75 | -1.69E-46 |
| MS.gene052481 | MS.gene58162 | 0.827589 | 1.44E-54 | -1.69E-46 |
| MS.gene052484 | MS.gene58162 | 0.829193 | 5.90E-55 | -1.69E-46 |
| MS.gene052485 | MS.gene58162 | 0.878213 | 3.37E-69 | -1.69E-46 |
| MS.gene053103 | MS.gene58162 | 0.840685 | 7.49E-58 | -1.69E-46 |
| MS.gene053104 | MS.gene58162 | 0.80352 | 3.35E-49 | -1.69E-46 |
| MS.gene053209 | MS.gene58162 | 0.857158 | 1.98E-62 | -1.69E-46 |
| MS.gene053322 | MS.gene58162 | 0.817788 | 2.75E-52 | -1.69E-46 |
| MS.gene053557 | MS.gene58162 | 0.869975 | 2.07E-66 | -1.69E-46 |
| MS.gene053559 | MS.gene58162 | 0.820769 | 5.76E-53 | -1.69E-46 |
| MS.gene053836 | MS.gene58162 | 0.873493 | 1.41E-67 | -1.69E-46 |
| MS.gene053907 | MS.gene58162 | 0.808985 | 2.37E-50 | -1.69E-46 |
| MS.gene054123 | MS.gene58162 | 0.851337 | 9.48E-61 | -1.69E-46 |
| MS.gene054349 | MS.gene58162 | 0.826883 | 2.12E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene58162 | 0.815827 | 7.57E-52 | -1.69E-46 |
| MS.gene054473 | MS.gene58162 | 0.826575 | 2.52E-54 | -1.69E-46 |
| MS.gene05455 | MS.gene58162 | 0.81357 | 2.39E-51 | -1.69E-46 |
| MS.gene054802 | MS.gene58162 | 0.801472 | 8.86E-49 | -1.69E-46 |
| MS.gene054803 | MS.gene58162 | 0.803123 | 4.05E-49 | -1.69E-46 |
| MS.gene054804 | MS.gene58162 | 0.802865 | 4.58E-49 | -1.69E-46 |
| MS.gene054955 | MS.gene58162 | 0.83262 | 8.52E-56 | -1.69E-46 |
| MS.gene054983 | MS.gene58162 | 0.802971 | 4.35E-49 | -1.69E-46 |
| MS.gene055116 | MS.gene58162 | 0.865401 | 6.07E-65 | -1.69E-46 |
| MS.gene055254 | MS.gene58162 | 0.823398 | 1.42E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene58162 | 0.862233 | 5.86E-64 | -1.69E-46 |
| MS.gene055390 | MS.gene58162 | 0.861436 | 1.03E-63 | -1.69E-46 |
| MS.gene055397 | MS.gene58162 | 0.80833 | 3.27E-50 | -1.69E-46 |
| MS.gene055412 | MS.gene58162 | 0.816961 | 4.22E-52 | -1.69E-46 |
| MS.gene055422 | MS.gene58162 | 0.882565 | 9.36E-71 | -1.69E-46 |
| MS.gene055428 | MS.gene58162 | 0.859455 | 4.09E-63 | -1.69E-46 |
| MS.gene055533 | MS.gene58162 | 0.815353 | 9.65E-52 | -1.69E-46 |
| MS.gene05553 | MS.gene58162 | 0.826233 | 3.04E-54 | -1.69E-46 |
| MS.gene055601 | MS.gene58162 | -0.800449 | 1.43E-48 | -1.69E-46 |
| MS.gene055604 | MS.gene58162 | 0.805979 | 1.03E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene58162 | 0.851069 | 1.13E-60 | -1.69E-46 |
| MS.gene056314 | MS.gene58162 | 0.811747 | 6.00E-51 | -1.69E-46 |
| MS.gene056407 | MS.gene58162 | 0.840951 | 6.38E-58 | -1.69E-46 |
| MS.gene056410 | MS.gene58162 | 0.825087 | 5.67E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene58162 | 0.812142 | 4.92E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene58162 | 0.883604 | 3.90E-71 | -1.69E-46 |
| MS.gene056612 | MS.gene58162 | 0.860916 | 1.48E-63 | -1.69E-46 |
| MS.gene056659 | MS.gene58162 | 0.845292 | 4.45E-59 | -1.69E-46 |
| MS.gene056719 | MS.gene58162 | 0.826902 | 2.10E-54 | -1.69E-46 |
| MS.gene056897 | MS.gene58162 | 0.801918 | 7.18E-49 | -1.69E-46 |
| MS.gene056899 | MS.gene58162 | -0.832338 | 1.00E-55 | -1.69E-46 |
| MS.gene05702 | MS.gene58162 | 0.846761 | 1.77E-59 | -1.69E-46 |
| MS.gene057121 | MS.gene58162 | 0.825603 | 4.28E-54 | -1.69E-46 |
| MS.gene057123 | MS.gene58162 | 0.807598 | 4.68E-50 | -1.69E-46 |
| MS.gene057124 | MS.gene58162 | 0.820949 | 5.23E-53 | -1.69E-46 |
| MS.gene057129 | MS.gene58162 | 0.826784 | 2.24E-54 | -1.69E-46 |
| MS.gene057146 | MS.gene58162 | 0.833913 | 4.06E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene58162 | 0.833868 | 4.17E-56 | -1.69E-46 |
| MS.gene05733 | MS.gene58162 | 0.83132 | 1.78E-55 | -1.69E-46 |
| MS.gene05735 | MS.gene58162 | 0.813891 | 2.03E-51 | -1.69E-46 |
| MS.gene057396 | MS.gene58162 | 0.807272 | 5.48E-50 | -1.69E-46 |
| MS.gene057448 | MS.gene58162 | 0.869056 | 4.12E-66 | -1.69E-46 |
| MS.gene057449 | MS.gene58162 | 0.864568 | 1.11E-64 | -1.69E-46 |
| MS.gene057450 | MS.gene58162 | 0.873607 | 1.29E-67 | -1.69E-46 |
| MS.gene057537 | MS.gene58162 | 0.812865 | 3.42E-51 | -1.69E-46 |
| MS.gene057749 | MS.gene58162 | 0.829193 | 5.90E-55 | -1.69E-46 |
| MS.gene057796 | MS.gene58162 | 0.817839 | 2.68E-52 | -1.69E-46 |
| MS.gene057823 | MS.gene58162 | 0.83026 | 3.25E-55 | -1.69E-46 |
| MS.gene058002 | MS.gene58162 | 0.89267 | 1.28E-74 | -1.69E-46 |
| MS.gene058082 | MS.gene58162 | 0.851042 | 1.15E-60 | -1.69E-46 |
| MS.gene05811 | MS.gene58162 | 0.881922 | 1.60E-70 | -1.69E-46 |
| MS.gene058142 | MS.gene58162 | 0.837418 | 5.26E-57 | -1.69E-46 |
| MS.gene058233 | MS.gene58162 | 0.824089 | 9.75E-54 | -1.69E-46 |
| MS.gene058276 | MS.gene58162 | 0.830714 | 2.51E-55 | -1.69E-46 |
| MS.gene058293 | MS.gene58162 | 0.873414 | 1.50E-67 | -1.69E-46 |
| MS.gene058365 | MS.gene58162 | 0.853299 | 2.62E-61 | -1.69E-46 |
| MS.gene05842 | MS.gene58162 | 0.810508 | 1.11E-50 | -1.69E-46 |
| MS.gene058660 | MS.gene58162 | 0.888945 | 3.76E-73 | -1.69E-46 |
| MS.gene058710 | MS.gene58162 | 0.80767 | 4.51E-50 | -1.69E-46 |
| MS.gene058749 | MS.gene58162 | 0.801906 | 7.22E-49 | -1.69E-46 |
| MS.gene058787 | MS.gene58162 | 0.845505 | 3.89E-59 | -1.69E-46 |
| MS.gene058845 | MS.gene58162 | 0.823132 | 1.63E-53 | -1.69E-46 |
| MS.gene05886 | MS.gene58162 | 0.809783 | 1.60E-50 | -1.69E-46 |
| MS.gene058928 | MS.gene58162 | 0.877725 | 4.99E-69 | -1.69E-46 |
| MS.gene058993 | MS.gene58162 | 0.805101 | 1.57E-49 | -1.69E-46 |
| MS.gene05907 | MS.gene58162 | 0.877406 | 6.45E-69 | -1.69E-46 |
| MS.gene059285 | MS.gene58162 | 0.848667 | 5.30E-60 | -1.69E-46 |
| MS.gene059294 | MS.gene58162 | 0.830847 | 2.33E-55 | -1.69E-46 |
| MS.gene059326 | MS.gene58162 | 0.806503 | 7.97E-50 | -1.69E-46 |
| MS.gene059342 | MS.gene58162 | 0.82956 | 4.81E-55 | -1.69E-46 |
| MS.gene059366 | MS.gene58162 | 0.845398 | 4.16E-59 | -1.69E-46 |
| MS.gene059420 | MS.gene58162 | 0.827109 | 1.88E-54 | -1.69E-46 |
| MS.gene059518 | MS.gene58162 | 0.869802 | 2.36E-66 | -1.69E-46 |
| MS.gene059536 | MS.gene58162 | 0.816425 | 5.57E-52 | -1.69E-46 |
| MS.gene059597 | MS.gene58162 | 0.900554 | 6.52E-78 | -1.69E-46 |
| MS.gene05959 | MS.gene58162 | 0.845082 | 5.07E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene58162 | 0.868654 | 5.56E-66 | -1.69E-46 |
| MS.gene059688 | MS.gene58162 | 0.881964 | 1.55E-70 | -1.69E-46 |
| MS.gene059692 | MS.gene58162 | 0.897267 | 1.66E-76 | -1.69E-46 |
| MS.gene059695 | MS.gene58162 | 0.89203 | 2.31E-74 | -1.69E-46 |
| MS.gene059708 | MS.gene58162 | 0.849656 | 2.81E-60 | -1.69E-46 |
| MS.gene05984 | MS.gene58162 | 0.878095 | 3.71E-69 | -1.69E-46 |
| MS.gene05986 | MS.gene58162 | 0.800028 | 1.75E-48 | -1.69E-46 |
| MS.gene059894 | MS.gene58162 | 0.891267 | 4.64E-74 | -1.69E-46 |
| MS.gene059899 | MS.gene58162 | 0.80653 | 7.87E-50 | -1.69E-46 |
| MS.gene059960 | MS.gene58162 | 0.836176 | 1.09E-56 | -1.69E-46 |
| MS.gene059974 | MS.gene58162 | 0.813847 | 2.08E-51 | -1.69E-46 |
| MS.gene060247 | MS.gene58162 | 0.804481 | 2.12E-49 | -1.69E-46 |
| MS.gene06037 | MS.gene58162 | 0.851533 | 8.34E-61 | -1.69E-46 |
| MS.gene060403 | MS.gene58162 | 0.810574 | 1.08E-50 | -1.69E-46 |
| MS.gene060407 | MS.gene58162 | 0.864742 | 9.77E-65 | -1.69E-46 |
| MS.gene060495 | MS.gene58162 | 0.80495 | 1.69E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene58162 | 0.821208 | 4.56E-53 | -1.69E-46 |
| MS.gene060818 | MS.gene58162 | 0.84751 | 1.10E-59 | -1.69E-46 |
| MS.gene06090 | MS.gene58162 | 0.810333 | 1.21E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene58162 | 0.825139 | 5.52E-54 | -1.69E-46 |
| MS.gene061049 | MS.gene58162 | 0.906788 | 1.02E-80 | -1.69E-46 |
| MS.gene061051 | MS.gene58162 | -0.861173 | 1.24E-63 | -1.69E-46 |
| MS.gene061112 | MS.gene58162 | 0.817559 | 3.10E-52 | -1.69E-46 |
| MS.gene061159 | MS.gene58162 | 0.81297 | 3.24E-51 | -1.69E-46 |
| MS.gene061200 | MS.gene58162 | 0.819772 | 9.75E-53 | -1.69E-46 |
| MS.gene061265 | MS.gene58162 | 0.816755 | 4.70E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58162.t1 | MTR_8g092050 | 97.845 | 464 | 9 | 1 | 2 | 464 | 66 | 529 | 0.0 | 946 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene58162.t1 | AT2G21860 | 69.214 | 458 | 122 | 3 | 3 | 456 | 69 | 511 | 0.0 | 682 |
Find 103 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCAATTTGGATCATTAATT+TGG | 0.084716 | 4.2:+10124646 | None:intergenic |
| ATTCACACATTCATCCAATT+TGG | 0.214697 | 4.2:+10124633 | None:intergenic |
| CACTATTTCATATGAGTCTT+TGG | 0.227130 | 4.2:+10125613 | None:intergenic |
| CTAGATTTGAAGAACAAATT+AGG | 0.233092 | 4.2:-10125710 | MS.gene58162:CDS |
| TTGGTATGAACCGGTGTTTC+AGG | 0.234337 | 4.2:-10125051 | MS.gene58162:CDS |
| GAAGTAAAGGGAAGCATATT+TGG | 0.240241 | 4.2:-10125668 | MS.gene58162:CDS |
| CCCTCTCAACTCTGCTTCTT+GGG | 0.260895 | 4.2:-10127357 | MS.gene58162:CDS |
| GCCCTCTCAACTCTGCTTCT+TGG | 0.274661 | 4.2:-10127358 | MS.gene58162:CDS |
| TATTTCAGTGTATTAGATAA+TGG | 0.312534 | 4.2:-10124951 | MS.gene58162:CDS |
| TCATGCATTGATCCTCCATT+AGG | 0.313626 | 4.2:-10124702 | MS.gene58162:CDS |
| CAAACGAAGAGTCGGTTAAC+TGG | 0.314699 | 4.2:-10125784 | MS.gene58162:CDS |
| TCCAAATTAATGATCCAAAT+TGG | 0.322012 | 4.2:-10124647 | MS.gene58162:CDS |
| TTCGTCCTCTCTCTTTCATT+TGG | 0.322166 | 4.2:+10124789 | None:intergenic |
| TGGAGCTGGCGCGTTGTAGC+GGG | 0.328165 | 4.2:-10125146 | MS.gene58162:CDS |
| GAGTTATTTCAAATGAGTTT+TGG | 0.328583 | 4.2:-10124929 | MS.gene58162:CDS |
| GCTGCAGGGCAGTCTTATAC+TGG | 0.330058 | 4.2:-10124843 | MS.gene58162:CDS |
| TACTAATCAATGCTTATATA+AGG | 0.337300 | 4.2:-10125529 | MS.gene58162:CDS |
| TTCATACGAAAGTGCGAATC+TGG | 0.340979 | 4.2:-10125330 | MS.gene58162:CDS |
| TTCTCCTCCTCCATACCATT+TGG | 0.346423 | 4.2:+10125012 | None:intergenic |
| CATGCATTGATCCTCCATTA+GGG | 0.358125 | 4.2:-10124701 | MS.gene58162:CDS |
| TCAACCATTGGAGGCACATA+TGG | 0.360449 | 4.2:+10125239 | None:intergenic |
| TATGGAGGAGGAGAAAATAT+AGG | 0.367865 | 4.2:-10125004 | MS.gene58162:CDS |
| TCATTTGGATATGCTCCATC+TGG | 0.369299 | 4.2:+10124804 | None:intergenic |
| GACGCAGTTCTGACGATATA+CGG | 0.372251 | 4.2:-10125565 | MS.gene58162:CDS |
| GTTAAGAGAGGTAAGGTATA+TGG | 0.378832 | 4.2:-10124981 | MS.gene58162:CDS |
| TGGGGTTTGTTCCACTATCA+TGG | 0.398219 | 4.2:-10124876 | MS.gene58162:CDS |
| ATGGAGGAGGAGAAAATATA+GGG | 0.404522 | 4.2:-10125003 | MS.gene58162:CDS |
| TGTAGCTAATGACCTTAGTT+GGG | 0.414877 | 4.2:-10124895 | MS.gene58162:CDS |
| TAATTACATACTTGATCAAC+AGG | 0.415438 | 4.2:+10125365 | None:intergenic |
| TTGTTTGTTGGTTGGTTAGA+GGG | 0.419948 | 4.2:-10125176 | MS.gene58162:CDS |
| TCAGGTACTTAATTGCTTGT+TGG | 0.420248 | 4.2:-10125432 | MS.gene58162:CDS |
| TTCTATAGAGGAAAAGCAAA+AGG | 0.423876 | 4.2:-10125080 | MS.gene58162:CDS |
| ATTGCAGAAGATTTGTTTGT+TGG | 0.430954 | 4.2:-10125188 | MS.gene58162:CDS |
| GTTGAAGAACTGCGGTCGTC+AGG | 0.432171 | 4.2:-10125450 | MS.gene58162:CDS |
| TTTGTTTGTTGGTTGGTTAG+AGG | 0.433258 | 4.2:-10125177 | MS.gene58162:CDS |
| GAGATTCACAATGAAGTAAA+GGG | 0.435424 | 4.2:-10125680 | MS.gene58162:CDS |
| GAACCCTCTGGAGTCCCTAA+TGG | 0.441951 | 4.2:+10124687 | None:intergenic |
| ATGGAGCTGGCGCGTTGTAG+CGG | 0.444125 | 4.2:-10125147 | MS.gene58162:CDS |
| ATGTAGCTAATGACCTTAGT+TGG | 0.456001 | 4.2:-10124896 | MS.gene58162:CDS |
| CATGGAGCTGCTAAAGCTGC+AGG | 0.462494 | 4.2:-10124858 | MS.gene58162:CDS |
| CAGCCTTCAGTAATTCTCTC+TGG | 0.462625 | 4.2:+10125831 | None:intergenic |
| CCTCCAATGGTTGAATTTCG+CGG | 0.464187 | 4.2:-10125230 | MS.gene58162:CDS |
| CTTTAGCAGCTCCATGATAG+TGG | 0.464240 | 4.2:+10124865 | None:intergenic |
| TGAGATTCACAATGAAGTAA+AGG | 0.466183 | 4.2:-10125681 | MS.gene58162:CDS |
| TGCCCGCGAAATTCAACCAT+TGG | 0.472472 | 4.2:+10125227 | None:intergenic |
| CTGTAACACGCAAAGCGAAA+AGG | 0.472645 | 4.2:+10125304 | None:intergenic |
| CTCCAATGGTTGAATTTCGC+GGG | 0.485968 | 4.2:-10125229 | MS.gene58162:CDS |
| CTGCAGGGCAGTCTTATACT+GGG | 0.487163 | 4.2:-10124842 | MS.gene58162:CDS |
| GAATGAAAACTTGAACCCTC+TGG | 0.494780 | 4.2:+10124675 | None:intergenic |
| GGAGGCACATATGGCTTGGT+AGG | 0.497651 | 4.2:+10125248 | None:intergenic |
| CATTTGAAGGCCAAATGGTA+TGG | 0.506239 | 4.2:-10125022 | MS.gene58162:CDS |
| CCCAAGAAGCAGAGTTGAGA+GGG | 0.506484 | 4.2:+10127357 | None:intergenic |
| AGAAATGTGAAATCAAAGAG+TGG | 0.510895 | 4.2:-10124749 | MS.gene58162:CDS |
| GCAGTACTTGTTAGTCCAGA+TGG | 0.511090 | 4.2:-10124819 | MS.gene58162:CDS |
| CAGAAGATTTGTTTGTTGGT+TGG | 0.512517 | 4.2:-10125184 | MS.gene58162:CDS |
| CAAGGGAATTGATCATATGC+TGG | 0.512768 | 4.2:+10125116 | None:intergenic |
| AGATTGAAATGGGTTGATGA+AGG | 0.515244 | 4.2:-10125905 | MS.gene58162:CDS |
| TAGAGGGTTTGCAATGGAGC+TGG | 0.515365 | 4.2:-10125160 | MS.gene58162:CDS |
| CAATATCAGCTATTCTATAG+AGG | 0.515759 | 4.2:-10125092 | MS.gene58162:CDS |
| CAGAGAGAATTACTGAAGGC+TGG | 0.524861 | 4.2:-10125830 | MS.gene58162:CDS |
| TGCAAACTGTAACCGAAGCA+TGG | 0.534436 | 4.2:-10125592 | MS.gene58162:CDS |
| AGTGGAACAAACCCCAACTA+AGG | 0.536966 | 4.2:+10124883 | None:intergenic |
| TTCAGTAATTCTCTCTGGAG+TGG | 0.537115 | 4.2:+10125836 | None:intergenic |
| AGAAAATATAGGGTTAAGAG+AGG | 0.541135 | 4.2:-10124993 | MS.gene58162:CDS |
| GTGAGGATGGTGGCTATAGT+TGG | 0.542421 | 4.2:-10127395 | MS.gene58162:CDS |
| TTTCGTATGAAGCGATGCAT+CGG | 0.549436 | 4.2:+10125342 | None:intergenic |
| CATTGGAGGCACATATGGCT+TGG | 0.559033 | 4.2:+10125244 | None:intergenic |
| ATATAGGGTTAAGAGAGGTA+AGG | 0.560870 | 4.2:-10124988 | MS.gene58162:CDS |
| TCTATAGAGGAAAAGCAAAA+GGG | 0.562818 | 4.2:-10125079 | MS.gene58162:CDS |
| GTTGGTTAGAGGGTTTGCAA+TGG | 0.562900 | 4.2:-10125166 | MS.gene58162:CDS |
| GATTGAAATGGGTTGATGAA+GGG | 0.563961 | 4.2:-10125904 | MS.gene58162:CDS |
| GTAGCTAATGACCTTAGTTG+GGG | 0.568269 | 4.2:-10124894 | MS.gene58162:CDS |
| GGATGAGCCTCCGGTGAGGA+TGG | 0.570432 | 4.2:-10127408 | MS.gene58162:CDS |
| TGCAGGGCAGTCTTATACTG+GGG | 0.572559 | 4.2:-10124841 | MS.gene58162:CDS |
| ACTGCGTCGATCCCATGCTT+CGG | 0.573705 | 4.2:+10125580 | None:intergenic |
| GGAGCTGGCGCGTTGTAGCG+GGG | 0.580346 | 4.2:-10125145 | MS.gene58162:CDS |
| GAAATGTGAAATCAAAGAGT+GGG | 0.580566 | 4.2:-10124748 | MS.gene58162:CDS |
| TGTGACGATGGATGAGCCTC+CGG | 0.581185 | 4.2:-10127417 | None:intergenic |
| ATGGTGGCTATAGTTGGCCA+TGG | 0.581673 | 4.2:-10127389 | MS.gene58162:CDS |
| CGCTGTTACAAACGAAGAGT+CGG | 0.585099 | 4.2:-10125792 | MS.gene58162:CDS |
| CAAGCCATATGTGCCTCCAA+TGG | 0.586466 | 4.2:-10125243 | MS.gene58162:CDS |
| CCGCGAAATTCAACCATTGG+AGG | 0.586866 | 4.2:+10125230 | None:intergenic |
| GCAAACTGTAACCGAAGCAT+GGG | 0.587392 | 4.2:-10125591 | MS.gene58162:CDS |
| ATGGAGCTGCTAAAGCTGCA+GGG | 0.587852 | 4.2:-10124857 | MS.gene58162:CDS |
| AAGGCCAAATGGTATGGAGG+AGG | 0.599053 | 4.2:-10125016 | MS.gene58162:CDS |
| ACTATAGCCACCATCCTCAC+CGG | 0.601762 | 4.2:+10127398 | None:intergenic |
| GAGGCACATATGGCTTGGTA+GGG | 0.605048 | 4.2:+10125249 | None:intergenic |
| TCCCAAGAAGCAGAGTTGAG+AGG | 0.610361 | 4.2:+10127356 | None:intergenic |
| AACTGTATGTTGAAGAACTG+CGG | 0.613073 | 4.2:-10125458 | MS.gene58162:CDS |
| TGAGAGGGCTGACAGCTCCA+TGG | 0.617554 | 4.2:+10127372 | None:intergenic |
| GATTTGAAGAACAAATTAGG+AGG | 0.621101 | 4.2:-10125707 | MS.gene58162:CDS |
| CCCTCTGGAGTCCCTAATGG+AGG | 0.622618 | 4.2:+10124690 | None:intergenic |
| TGAGCCTCCGGTGAGGATGG+TGG | 0.634453 | 4.2:-10127405 | MS.gene58162:CDS |
| ATTAGATTGAATGCACTCGT+CGG | 0.634851 | 4.2:+10125862 | None:intergenic |
| TTGAAGGCCAAATGGTATGG+AGG | 0.635847 | 4.2:-10125019 | MS.gene58162:CDS |
| CATATCCAAATGAAAGAGAG+AGG | 0.645957 | 4.2:-10124794 | MS.gene58162:CDS |
| AGAATAGCTGATATTGACAA+GGG | 0.651578 | 4.2:+10125099 | None:intergenic |
| CCTCCATTAGGGACTCCAGA+GGG | 0.662863 | 4.2:-10124690 | MS.gene58162:CDS |
| TAGAATAGCTGATATTGACA+AGG | 0.664980 | 4.2:+10125098 | None:intergenic |
| TCCTCCATTAGGGACTCCAG+AGG | 0.675079 | 4.2:-10124691 | MS.gene58162:CDS |
| CGATGGATGAGCCTCCGGTG+AGG | 0.688939 | 4.2:-10127412 | MS.gene58162:CDS |
| ACTCCAGAGAGAATTACTGA+AGG | 0.689331 | 4.2:-10125834 | MS.gene58162:CDS |
| ATAGCCACCATCCTCACCGG+AGG | 0.702930 | 4.2:+10127401 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAATAAAAGAAATATGT+GGG | + | chr4.2:10125642-10125661 | None:intergenic | 10.0% |
| !! | ATTTCAATATAAAAATAGCT+TGG | + | chr4.2:10124840-10124859 | None:intergenic | 15.0% |
| !! | GATTAAATAAAAGAAATATG+TGG | + | chr4.2:10125643-10125662 | None:intergenic | 15.0% |
| !! | TTATATCCTTATATAAAAAC+AGG | + | chr4.2:10124783-10124802 | None:intergenic | 15.0% |
| !! | TTATGATATAGTAGTTAATT+AGG | + | chr4.2:10125595-10125614 | None:intergenic | 15.0% |
| !!! | GATCTTTTTTCTTTATTTAT+AGG | - | chr4.2:10125534-10125553 | MS.gene58162:CDS | 15.0% |
| !!! | TTATTTTATTTATCCAAACA+GGG | + | chr4.2:10124913-10124932 | None:intergenic | 15.0% |
| !!! | TTTATTTTATTTATCCAAAC+AGG | + | chr4.2:10124914-10124933 | None:intergenic | 15.0% |
| !! | AAGCATATTTGGAAAAATAT+TGG | - | chr4.2:10126388-10126407 | MS.gene58162:intron | 20.0% |
| !! | ACAACTTATATGAAAACATT+TGG | + | chr4.2:10124939-10124958 | None:intergenic | 20.0% |
| !! | ACTCAATAAAGTTATACATA+AGG | - | chr4.2:10125105-10125124 | MS.gene58162:CDS | 20.0% |
| !! | AGCATATTTGGAAAAATATT+GGG | - | chr4.2:10126389-10126408 | MS.gene58162:intron | 20.0% |
| !! | ATATAGTAGTTAATTAGGTT+GGG | + | chr4.2:10125590-10125609 | None:intergenic | 20.0% |
| !! | GTATAACTTTATTGAGTTTA+CGG | + | chr4.2:10125102-10125121 | None:intergenic | 20.0% |
| !! | TACTAATCAATGCTTATATA+AGG | - | chr4.2:10126516-10126535 | MS.gene58162:intron | 20.0% |
| !! | TATAACTTTATTGAGTTTAC+GGG | + | chr4.2:10125101-10125120 | None:intergenic | 20.0% |
| !! | TATTTCAGTGTATTAGATAA+TGG | - | chr4.2:10127094-10127113 | MS.gene58162:intron | 20.0% |
| !!! | CTATAACCTGTTTTTATATA+AGG | - | chr4.2:10124774-10124793 | MS.gene58162:CDS | 20.0% |
| !!! | TTATTTCTTTCAAATTTGCT+TGG | - | chr4.2:10125699-10125718 | MS.gene58162:CDS | 20.0% |
| !!! | TTGACTATTTTCTTACTTAT+GGG | - | chr4.2:10125816-10125835 | MS.gene58162:CDS | 20.0% |
| !!! | TTTGACTATTTTCTTACTTA+TGG | - | chr4.2:10125815-10125834 | MS.gene58162:CDS | 20.0% |
| ! | AAGATGTTTATTAACGTAGA+AGG | - | chr4.2:10125512-10125531 | MS.gene58162:CDS | 25.0% |
| ! | ACATGAAACTCATTTGAATT+TGG | + | chr4.2:10125135-10125154 | None:intergenic | 25.0% |
| ! | AGTTAATTCTCAAATCTTTG+AGG | + | chr4.2:10125426-10125445 | None:intergenic | 25.0% |
| ! | ATTTAATGTTCCCTTTAATC+AGG | - | chr4.2:10126112-10126131 | MS.gene58162:intron | 25.0% |
| ! | CTAGATTTGAAGAACAAATT+AGG | - | chr4.2:10126335-10126354 | MS.gene58162:intron | 25.0% |
| ! | GAAAAATAATTGTCTTGAGT+TGG | - | chr4.2:10126763-10126782 | MS.gene58162:intron | 25.0% |
| ! | GATATAGTAGTTAATTAGGT+TGG | + | chr4.2:10125591-10125610 | None:intergenic | 25.0% |
| ! | GCATATTTGGAAAAATATTG+GGG | - | chr4.2:10126390-10126409 | MS.gene58162:intron | 25.0% |
| ! | GTTGTAAAGCTATCATTTAA+AGG | - | chr4.2:10125969-10125988 | MS.gene58162:intron | 25.0% |
| ! | TAATTACATACTTGATCAAC+AGG | + | chr4.2:10126683-10126702 | None:intergenic | 25.0% |
| ! | TCCAAATTAATGATCCAAAT+TGG | - | chr4.2:10127398-10127417 | MS.gene58162:CDS | 25.0% |
| ! | TCCAATTTGGATCATTAATT+TGG | + | chr4.2:10127402-10127421 | None:intergenic | 25.0% |
| ! | TCTACGTTAATAAACATCTT+TGG | + | chr4.2:10125512-10125531 | None:intergenic | 25.0% |
| ! | TGATTAAAGGGAACATTAAA+TGG | + | chr4.2:10126113-10126132 | None:intergenic | 25.0% |
| ! | TTACATACTTTAGCAAATCA+TGG | - | chr4.2:10125311-10125330 | MS.gene58162:CDS | 25.0% |
| !! | AAATTTATTGTAGTTTGTGG+TGG | - | chr4.2:10125216-10125235 | MS.gene58162:CDS | 25.0% |
| !! | AATCTTTTTGCCTGATTAAA+GGG | + | chr4.2:10126125-10126144 | None:intergenic | 25.0% |
| !! | TTTCAGGTAAAAACATTTGA+AGG | - | chr4.2:10127010-10127029 | MS.gene58162:intron | 25.0% |
| !!! | AACAAGTTGAAATTAGCTTT+TGG | + | chr4.2:10125952-10125971 | None:intergenic | 25.0% |
| !!! | AATGATTTTACTGGCTAAAA+CGG | + | chr4.2:10125618-10125637 | None:intergenic | 25.0% |
| !!! | GAGTTATTTCAAATGAGTTT+TGG | - | chr4.2:10127116-10127135 | MS.gene58162:intron | 25.0% |
| !!! | TTTAAGTTCTAAAGTGCTAA+TGG | - | chr4.2:10125889-10125908 | MS.gene58162:CDS | 25.0% |
| AAAAACATTTGAAGGCCAAA+TGG | - | chr4.2:10127018-10127037 | MS.gene58162:intron | 30.0% | |
| AGAAAATATAGGGTTAAGAG+AGG | - | chr4.2:10127052-10127071 | MS.gene58162:intron | 30.0% | |
| AGAAATGTGAAATCAAAGAG+TGG | - | chr4.2:10127296-10127315 | MS.gene58162:intron | 30.0% | |
| AGAATAGCTGATATTGACAA+GGG | + | chr4.2:10126949-10126968 | None:intergenic | 30.0% | |
| ATCAGGCAAAAAGATTGAAA+TGG | - | chr4.2:10126129-10126148 | MS.gene58162:intron | 30.0% | |
| ATTGAAAAACTTGAGAGCAA+AGG | - | chr4.2:10126550-10126569 | MS.gene58162:intron | 30.0% | |
| ATTGAGAAGCTTATCCAAAA+AGG | - | chr4.2:10126046-10126065 | MS.gene58162:intron | 30.0% | |
| CAATATCAGCTATTCTATAG+AGG | - | chr4.2:10126953-10126972 | MS.gene58162:intron | 30.0% | |
| CACTATTTCATATGAGTCTT+TGG | + | chr4.2:10126435-10126454 | None:intergenic | 30.0% | |
| GAAATGTGAAATCAAAGAGT+GGG | - | chr4.2:10127297-10127316 | MS.gene58162:intron | 30.0% | |
| GAAGGCAATAATATAATGTG+CGG | - | chr4.2:10125249-10125268 | MS.gene58162:CDS | 30.0% | |
| GAGATTCACAATGAAGTAAA+GGG | - | chr4.2:10126365-10126384 | MS.gene58162:intron | 30.0% | |
| GATTTGAAGAACAAATTAGG+AGG | - | chr4.2:10126338-10126357 | MS.gene58162:intron | 30.0% | |
| GGGAAATTTATTGTAGTTTG+TGG | - | chr4.2:10125213-10125232 | MS.gene58162:CDS | 30.0% | |
| TAGAATAGCTGATATTGACA+AGG | + | chr4.2:10126950-10126969 | None:intergenic | 30.0% | |
| TCAGGCAAAAAGATTGAAAT+GGG | - | chr4.2:10126130-10126149 | MS.gene58162:intron | 30.0% | |
| TCCAAAAAGGTTCATACTAA+CGG | - | chr4.2:10126059-10126078 | MS.gene58162:intron | 30.0% | |
| TCTATAGAGGAAAAGCAAAA+GGG | - | chr4.2:10126966-10126985 | MS.gene58162:intron | 30.0% | |
| TGAGATTCACAATGAAGTAA+AGG | - | chr4.2:10126364-10126383 | MS.gene58162:intron | 30.0% | |
| TTCTATAGAGGAAAAGCAAA+AGG | - | chr4.2:10126965-10126984 | MS.gene58162:intron | 30.0% | |
| TTGAAAAACTTGAGAGCAAA+GGG | - | chr4.2:10126551-10126570 | MS.gene58162:intron | 30.0% | |
| TTGGAATAGCATGATTCATA+AGG | - | chr4.2:10125340-10125359 | MS.gene58162:CDS | 30.0% | |
| ! | ATTGCAGAAGATTTGTTTGT+TGG | - | chr4.2:10126857-10126876 | MS.gene58162:intron | 30.0% |
| ! | CAATCTTTTTGCCTGATTAA+AGG | + | chr4.2:10126126-10126145 | None:intergenic | 30.0% |
| ! | TATGTGGGTAATGATTTTAC+TGG | + | chr4.2:10125627-10125646 | None:intergenic | 30.0% |
| ! | TGAAGAGCTTTTCTACAATT+AGG | + | chr4.2:10126641-10126660 | None:intergenic | 30.0% |
| !! | AAGTTTTTCAATACTGGAAC+TGG | + | chr4.2:10126542-10126561 | None:intergenic | 30.0% |
| !! | AATGTTTTTACCTGAAACAC+CGG | + | chr4.2:10127007-10127026 | None:intergenic | 30.0% |
| !! | GTCATAATAGTTTTGCTAGA+GGG | - | chr4.2:10125787-10125806 | MS.gene58162:CDS | 30.0% |
| !! | TGTCATAATAGTTTTGCTAG+AGG | - | chr4.2:10125786-10125805 | MS.gene58162:CDS | 30.0% |
| !!! | AAATGAGTTTTGGACAATTG+TGG | - | chr4.2:10127126-10127145 | MS.gene58162:intron | 30.0% |
| !!! | GTCTTTGGTTTTATCTAACT+CGG | + | chr4.2:10126420-10126439 | None:intergenic | 30.0% |
| AAAATCCAAAGACATGTTGC+AGG | + | chr4.2:10125483-10125502 | None:intergenic | 35.0% | |
| AACACATGCATATAGTGAGA+TGG | - | chr4.2:10125192-10125211 | MS.gene58162:CDS | 35.0% | |
| AACTGTATGTTGAAGAACTG+CGG | - | chr4.2:10126587-10126606 | MS.gene58162:intron | 35.0% | |
| ACACATGCATATAGTGAGAT+GGG | - | chr4.2:10125193-10125212 | MS.gene58162:CDS | 35.0% | |
| AGTCAGCTGAAAACAACTTA+TGG | - | chr4.2:10124999-10125018 | MS.gene58162:CDS | 35.0% | |
| ATATAGGGTTAAGAGAGGTA+AGG | - | chr4.2:10127057-10127076 | MS.gene58162:intron | 35.0% | |
| ATGGAGGAGGAGAAAATATA+GGG | - | chr4.2:10127042-10127061 | MS.gene58162:intron | 35.0% | |
| ATGTAGCTAATGACCTTAGT+TGG | - | chr4.2:10127149-10127168 | MS.gene58162:intron | 35.0% | |
| ATTAGATTGAATGCACTCGT+CGG | + | chr4.2:10126186-10126205 | None:intergenic | 35.0% | |
| CATATCCAAATGAAAGAGAG+AGG | - | chr4.2:10127251-10127270 | MS.gene58162:intron | 35.0% | |
| CATGATTCATAAGGAAACAC+AGG | - | chr4.2:10125349-10125368 | MS.gene58162:CDS | 35.0% | |
| GCGGATATAACAGTAAAATC+TGG | - | chr4.2:10125268-10125287 | MS.gene58162:CDS | 35.0% | |
| GTTAAGAGAGGTAAGGTATA+TGG | - | chr4.2:10127064-10127083 | MS.gene58162:intron | 35.0% | |
| TATGGAGGAGGAGAAAATAT+AGG | - | chr4.2:10127041-10127060 | MS.gene58162:intron | 35.0% | |
| TCAGGTACTTAATTGCTTGT+TGG | - | chr4.2:10126613-10126632 | MS.gene58162:intron | 35.0% | |
| TGTAGCTAATGACCTTAGTT+GGG | - | chr4.2:10127150-10127169 | MS.gene58162:intron | 35.0% | |
| ! | CAGAAGATTTGTTTGTTGGT+TGG | - | chr4.2:10126861-10126880 | MS.gene58162:intron | 35.0% |
| ! | GAAAAGCAAAAGGGTCTTTT+TGG | - | chr4.2:10126975-10126994 | MS.gene58162:intron | 35.0% |
| ! | GAAGTAAAGGGAAGCATATT+TGG | - | chr4.2:10126377-10126396 | MS.gene58162:intron | 35.0% |
| ! | TAGCAAATCATGGATTGTGT+TGG | - | chr4.2:10125321-10125340 | MS.gene58162:CDS | 35.0% |
| ! | TCCGTTAGTATGAACCTTTT+TGG | + | chr4.2:10126063-10126082 | None:intergenic | 35.0% |
| ! | TTGAGTTTACGGGTATGTTT+TGG | + | chr4.2:10125091-10125110 | None:intergenic | 35.0% |
| ! | TTGTTTGTTGGTTGGTTAGA+GGG | - | chr4.2:10126869-10126888 | MS.gene58162:intron | 35.0% |
| ! | TTTGTTTGTTGGTTGGTTAG+AGG | - | chr4.2:10126868-10126887 | MS.gene58162:intron | 35.0% |
| !! | AGATTGAAATGGGTTGATGA+AGG | - | chr4.2:10126140-10126159 | MS.gene58162:intron | 35.0% |
| !! | GATTGAAATGGGTTGATGAA+GGG | - | chr4.2:10126141-10126160 | MS.gene58162:intron | 35.0% |
| !! | GCTCTCAAGTTTTTCAATAC+TGG | + | chr4.2:10126548-10126567 | None:intergenic | 35.0% |
| !! | GTAATCCAAGAGTGCTATTT+AGG | - | chr4.2:10125164-10125183 | MS.gene58162:CDS | 35.0% |
| ACTCCAGAGAGAATTACTGA+AGG | - | chr4.2:10126211-10126230 | MS.gene58162:intron | 40.0% | |
| ACTCTCCTAAATAGCACTCT+TGG | + | chr4.2:10125172-10125191 | None:intergenic | 40.0% | |
| CAAGGGAATTGATCATATGC+TGG | + | chr4.2:10126932-10126951 | None:intergenic | 40.0% | |
| CATTTGAAGGCCAAATGGTA+TGG | - | chr4.2:10127023-10127042 | MS.gene58162:intron | 40.0% | |
| GAATGAAAACTTGAACCCTC+TGG | + | chr4.2:10127373-10127392 | None:intergenic | 40.0% | |
| GTAGCTAATGACCTTAGTTG+GGG | - | chr4.2:10127151-10127170 | MS.gene58162:intron | 40.0% | |
| TCATTTGGATATGCTCCATC+TGG | + | chr4.2:10127244-10127263 | None:intergenic | 40.0% | |
| TCTATACTGTAGACCCTGTT+TGG | - | chr4.2:10124897-10124916 | MS.gene58162:CDS | 40.0% | |
| TTCGTCCTCTCTCTTTCATT+TGG | + | chr4.2:10127259-10127278 | None:intergenic | 40.0% | |
| TTTCGTATGAAGCGATGCAT+CGG | + | chr4.2:10126706-10126725 | None:intergenic | 40.0% | |
| ! | CATGCATTGATCCTCCATTA+GGG | - | chr4.2:10127344-10127363 | MS.gene58162:CDS | 40.0% |
| ! | TCATGCATTGATCCTCCATT+AGG | - | chr4.2:10127343-10127362 | MS.gene58162:CDS | 40.0% |
| ! | TTCAGTAATTCTCTCTGGAG+TGG | + | chr4.2:10126212-10126231 | None:intergenic | 40.0% |
| ! | TTCATACGAAAGTGCGAATC+TGG | - | chr4.2:10126715-10126734 | MS.gene58162:intron | 40.0% |
| !! | AGGGTCTTTTTGGTATGAAC+CGG | - | chr4.2:10126985-10127004 | MS.gene58162:intron | 40.0% |
| AGTGGAACAAACCCCAACTA+AGG | + | chr4.2:10127165-10127184 | None:intergenic | 45.0% | |
| CAAACGAAGAGTCGGTTAAC+TGG | - | chr4.2:10126261-10126280 | MS.gene58162:intron | 45.0% | |
| CAGAGAGAATTACTGAAGGC+TGG | - | chr4.2:10126215-10126234 | MS.gene58162:intron | 45.0% | |
| CAGCCTTCAGTAATTCTCTC+TGG | + | chr4.2:10126217-10126236 | None:intergenic | 45.0% | |
| CCTCCAATGGTTGAATTTCG+CGG | - | chr4.2:10126815-10126834 | MS.gene58162:intron | 45.0% | |
| CGCTGTTACAAACGAAGAGT+CGG | - | chr4.2:10126253-10126272 | MS.gene58162:intron | 45.0% | |
| CTCCAATGGTTGAATTTCGC+GGG | - | chr4.2:10126816-10126835 | MS.gene58162:intron | 45.0% | |
| CTGTAACACGCAAAGCGAAA+AGG | + | chr4.2:10126744-10126763 | None:intergenic | 45.0% | |
| CTTTAGCAGCTCCATGATAG+TGG | + | chr4.2:10127183-10127202 | None:intergenic | 45.0% | |
| GCAAACTGTAACCGAAGCAT+GGG | - | chr4.2:10126454-10126473 | MS.gene58162:intron | 45.0% | |
| GTTGGTTAGAGGGTTTGCAA+TGG | - | chr4.2:10126879-10126898 | MS.gene58162:intron | 45.0% | |
| TGCAAACTGTAACCGAAGCA+TGG | - | chr4.2:10126453-10126472 | MS.gene58162:intron | 45.0% | |
| TGCAACCTGCAACATGTCTT+TGG | - | chr4.2:10125475-10125494 | MS.gene58162:CDS | 45.0% | |
| TTCTCCTCCTCCATACCATT+TGG | + | chr4.2:10127036-10127055 | None:intergenic | 45.0% | |
| TTGAAGGCCAAATGGTATGG+AGG | - | chr4.2:10127026-10127045 | MS.gene58162:intron | 45.0% | |
| TTGGTATGAACCGGTGTTTC+AGG | - | chr4.2:10126994-10127013 | MS.gene58162:intron | 45.0% | |
| ! | AATTTGCTTGGACAGCATGC+AGG | - | chr4.2:10125711-10125730 | MS.gene58162:CDS | 45.0% |
| ! | GACGCAGTTCTGACGATATA+CGG | - | chr4.2:10126480-10126499 | MS.gene58162:intron | 45.0% |
| ! | GCAGTACTTGTTAGTCCAGA+TGG | - | chr4.2:10127226-10127245 | MS.gene58162:intron | 45.0% |
| ! | TCAACCATTGGAGGCACATA+TGG | + | chr4.2:10126809-10126828 | None:intergenic | 45.0% |
| ! | TGGGGTTTGTTCCACTATCA+TGG | - | chr4.2:10127169-10127188 | MS.gene58162:intron | 45.0% |
| ! | TGTGGTGGAGAAGAAAGAGA+AGG | - | chr4.2:10125231-10125250 | MS.gene58162:CDS | 45.0% |
| AAGGCCAAATGGTATGGAGG+AGG | - | chr4.2:10127029-10127048 | MS.gene58162:intron | 50.0% | |
| ACTATAGCCACCATCCTCAC+CGG | + | chr4.2:10124650-10124669 | None:intergenic | 50.0% | |
| ATGGAGCTGCTAAAGCTGCA+GGG | - | chr4.2:10127188-10127207 | MS.gene58162:intron | 50.0% | |
| ATGGTGGCTATAGTTGGCCA+TGG | - | chr4.2:10124656-10124675 | MS.gene58162:CDS | 50.0% | |
| CAAGCCATATGTGCCTCCAA+TGG | - | chr4.2:10126802-10126821 | MS.gene58162:intron | 50.0% | |
| CCCAAGAAGCAGAGTTGAGA+GGG | + | chr4.2:10124691-10124710 | None:intergenic | 50.0% | |
| CCCTCTCAACTCTGCTTCTT+GGG | - | chr4.2:10124688-10124707 | MS.gene58162:CDS | 50.0% | |
| CCGCGAAATTCAACCATTGG+AGG | + | chr4.2:10126818-10126837 | None:intergenic | 50.0% | |
| TAGAGGGTTTGCAATGGAGC+TGG | - | chr4.2:10126885-10126904 | MS.gene58162:intron | 50.0% | |
| TCCCAAGAAGCAGAGTTGAG+AGG | + | chr4.2:10124692-10124711 | None:intergenic | 50.0% | |
| TGCCCGCGAAATTCAACCAT+TGG | + | chr4.2:10126821-10126840 | None:intergenic | 50.0% | |
| ! | CATTGGAGGCACATATGGCT+TGG | + | chr4.2:10126804-10126823 | None:intergenic | 50.0% |
| ! | CTGCAGGGCAGTCTTATACT+GGG | - | chr4.2:10127203-10127222 | MS.gene58162:intron | 50.0% |
| ! | GTGAGGATGGTGGCTATAGT+TGG | - | chr4.2:10124650-10124669 | MS.gene58162:CDS | 50.0% |
| ! | TGCAGGGCAGTCTTATACTG+GGG | - | chr4.2:10127204-10127223 | MS.gene58162:intron | 50.0% |
| !! | GAGGCACATATGGCTTGGTA+GGG | + | chr4.2:10126799-10126818 | None:intergenic | 50.0% |
| CATGGAGCTGCTAAAGCTGC+AGG | - | chr4.2:10127187-10127206 | MS.gene58162:intron | 55.0% | |
| CCTCCATTAGGGACTCCAGA+GGG | - | chr4.2:10127355-10127374 | MS.gene58162:CDS | 55.0% | |
| GCCCTCTCAACTCTGCTTCT+TGG | - | chr4.2:10124687-10124706 | MS.gene58162:CDS | 55.0% | |
| GTTGAAGAACTGCGGTCGTC+AGG | - | chr4.2:10126595-10126614 | MS.gene58162:intron | 55.0% | |
| TCCTCCATTAGGGACTCCAG+AGG | - | chr4.2:10127354-10127373 | MS.gene58162:CDS | 55.0% | |
| ! | ACTGCGTCGATCCCATGCTT+CGG | + | chr4.2:10126468-10126487 | None:intergenic | 55.0% |
| ! | GCTGCAGGGCAGTCTTATAC+TGG | - | chr4.2:10127202-10127221 | MS.gene58162:intron | 55.0% |
| !! | GAACCCTCTGGAGTCCCTAA+TGG | + | chr4.2:10127361-10127380 | None:intergenic | 55.0% |
| !! | GGAGGCACATATGGCTTGGT+AGG | + | chr4.2:10126800-10126819 | None:intergenic | 55.0% |
| ATAGCCACCATCCTCACCGG+AGG | + | chr4.2:10124647-10124666 | None:intergenic | 60.0% | |
| ATGGAGCTGGCGCGTTGTAG+CGG | - | chr4.2:10126898-10126917 | MS.gene58162:intron | 60.0% | |
| TGAGAGGGCTGACAGCTCCA+TGG | + | chr4.2:10124676-10124695 | None:intergenic | 60.0% | |
| !! | CCCTCTGGAGTCCCTAATGG+AGG | + | chr4.2:10127358-10127377 | None:intergenic | 60.0% |
| GGATGAGCCTCCGGTGAGGA+TGG | - | chr4.2:10124637-10124656 | MS.gene58162:CDS | 65.0% | |
| TGAGCCTCCGGTGAGGATGG+TGG | - | chr4.2:10124640-10124659 | MS.gene58162:CDS | 65.0% | |
| TGGAGCTGGCGCGTTGTAGC+GGG | - | chr4.2:10126899-10126918 | MS.gene58162:intron | 65.0% | |
| GGAGCTGGCGCGTTGTAGCG+GGG | - | chr4.2:10126900-10126919 | MS.gene58162:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.2 | gene | 10124635 | 10127432 | 10124635 | ID=MS.gene58162 |
| chr4.2 | mRNA | 10124635 | 10127432 | 10124635 | ID=MS.gene58162.t1;Parent=MS.gene58162 |
| chr4.2 | exon | 10127337 | 10127432 | 10127337 | ID=MS.gene58162.t1.exon1;Parent=MS.gene58162.t1 |
| chr4.2 | CDS | 10127337 | 10127432 | 10127337 | ID=cds.MS.gene58162.t1;Parent=MS.gene58162.t1 |
| chr4.2 | exon | 10124635 | 10125933 | 10124635 | ID=MS.gene58162.t1.exon2;Parent=MS.gene58162.t1 |
| chr4.2 | CDS | 10124635 | 10125933 | 10124635 | ID=cds.MS.gene58162.t1;Parent=MS.gene58162.t1 |
| Gene Sequence |
| Protein sequence |
