AlfalfaGEDB | MS.gene60296

M. sativa cultivar XinJiangDaYe / MS.gene60296

KEGG: -
GO: -
PFAM: PF14547.9

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60296.t1	XP_003588785.1	98	151	3	0	1	151	1	151	1.10E-42	183

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60296.t1	Q39176	69.7	76	22	1	77	151	93	168	3.6e-23	109.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60296.t1	G7I725	98.0	151	3	0	1	151	1	151	7.7e-43	183.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene049137	MS.gene60296	0.823053	1.70E-53	-1.69E-46
MS.gene049217	MS.gene60296	0.856694	2.71E-62	-1.69E-46
MS.gene049285	MS.gene60296	0.815986	6.98E-52	-1.69E-46
MS.gene049320	MS.gene60296	0.813886	2.04E-51	-1.69E-46
MS.gene049351	MS.gene60296	0.803329	3.67E-49	-1.69E-46
MS.gene049356	MS.gene60296	0.812572	3.96E-51	-1.69E-46
MS.gene049369	MS.gene60296	0.845725	3.39E-59	-1.69E-46
MS.gene049396	MS.gene60296	0.802715	4.92E-49	-1.69E-46
MS.gene049427	MS.gene60296	0.834746	2.51E-56	-1.69E-46
MS.gene049491	MS.gene60296	0.818267	2.14E-52	-1.69E-46
MS.gene049661	MS.gene60296	0.807465	4.99E-50	-1.69E-46
MS.gene049805	MS.gene60296	0.860595	1.85E-63	-1.69E-46
MS.gene049907	MS.gene60296	0.811245	7.71E-51	-1.69E-46
MS.gene050076	MS.gene60296	0.819978	8.74E-53	-1.69E-46
MS.gene050163	MS.gene60296	0.806613	7.55E-50	-1.69E-46
MS.gene050432	MS.gene60296	0.855312	6.86E-62	-1.69E-46
MS.gene050593	MS.gene60296	0.828579	8.31E-55	-1.69E-46
MS.gene050670	MS.gene60296	0.832814	7.62E-56	-1.69E-46
MS.gene050686	MS.gene60296	0.857156	1.98E-62	-1.69E-46
MS.gene050767	MS.gene60296	0.84891	4.53E-60	-1.69E-46
MS.gene050770	MS.gene60296	0.850629	1.50E-60	-1.69E-46
MS.gene050772	MS.gene60296	0.829692	4.46E-55	-1.69E-46
MS.gene05105	MS.gene60296	0.817512	3.17E-52	-1.69E-46
MS.gene051167	MS.gene60296	-0.806884	6.62E-50	-1.69E-46
MS.gene051228	MS.gene60296	0.822782	1.97E-53	-1.69E-46
MS.gene051387	MS.gene60296	0.837189	6.02E-57	-1.69E-46
MS.gene051666	MS.gene60296	0.850625	1.51E-60	-1.69E-46
MS.gene051692	MS.gene60296	0.854728	1.01E-61	-1.69E-46
MS.gene051694	MS.gene60296	0.806097	9.71E-50	-1.69E-46
MS.gene051858	MS.gene60296	0.821196	4.59E-53	-1.69E-46
MS.gene051874	MS.gene60296	0.810658	1.03E-50	-1.69E-46
MS.gene051877	MS.gene60296	0.827795	1.28E-54	-1.69E-46
MS.gene052188	MS.gene60296	0.821224	4.52E-53	-1.69E-46
MS.gene052271	MS.gene60296	0.865847	4.39E-65	-1.69E-46
MS.gene052290	MS.gene60296	0.821371	4.18E-53	-1.69E-46
MS.gene052310	MS.gene60296	0.831897	1.29E-55	-1.69E-46
MS.gene052322	MS.gene60296	0.802623	5.14E-49	-1.69E-46
MS.gene052326	MS.gene60296	0.813022	3.16E-51	-1.69E-46
MS.gene052379	MS.gene60296	0.849018	4.23E-60	-1.69E-46
MS.gene052421	MS.gene60296	0.848018	8.01E-60	-1.69E-46
MS.gene052481	MS.gene60296	0.810534	1.10E-50	-1.69E-46
MS.gene052484	MS.gene60296	0.825441	4.68E-54	-1.69E-46
MS.gene052485	MS.gene60296	0.841268	5.27E-58	-1.69E-46
MS.gene052615	MS.gene60296	0.811535	6.67E-51	-1.69E-46
MS.gene053009	MS.gene60296	0.807606	4.66E-50	-1.69E-46
MS.gene053103	MS.gene60296	0.832376	9.79E-56	-1.69E-46
MS.gene053104	MS.gene60296	0.850684	1.45E-60	-1.69E-46
MS.gene053213	MS.gene60296	0.82946	5.09E-55	-1.69E-46
MS.gene053286	MS.gene60296	0.822635	2.13E-53	-1.69E-46
MS.gene053322	MS.gene60296	0.873095	1.92E-67	-1.69E-46
MS.gene053449	MS.gene60296	0.834243	3.36E-56	-1.69E-46
MS.gene053574	MS.gene60296	0.807389	5.18E-50	-1.69E-46
MS.gene053632	MS.gene60296	0.831634	1.49E-55	-1.69E-46
MS.gene053758	MS.gene60296	0.804028	2.63E-49	-1.69E-46
MS.gene053813	MS.gene60296	0.880661	4.57E-70	-1.69E-46
MS.gene053916	MS.gene60296	0.827247	1.74E-54	-1.69E-46
MS.gene054003	MS.gene60296	0.806922	6.50E-50	-1.69E-46
MS.gene054123	MS.gene60296	0.817791	2.75E-52	-1.69E-46
MS.gene054376	MS.gene60296	0.833974	3.92E-56	-1.69E-46
MS.gene054543	MS.gene60296	0.836159	1.10E-56	-1.69E-46
MS.gene054642	MS.gene60296	0.84057	8.03E-58	-1.69E-46
MS.gene054802	MS.gene60296	0.83688	7.22E-57	-1.69E-46
MS.gene054803	MS.gene60296	0.836414	9.49E-57	-1.69E-46
MS.gene054804	MS.gene60296	0.839312	1.71E-57	-1.69E-46
MS.gene054955	MS.gene60296	0.84119	5.52E-58	-1.69E-46
MS.gene05505	MS.gene60296	0.865319	6.44E-65	-1.69E-46
MS.gene055116	MS.gene60296	0.811395	7.15E-51	-1.69E-46
MS.gene055206	MS.gene60296	0.803239	3.83E-49	-1.69E-46
MS.gene055277	MS.gene60296	0.824963	6.07E-54	-1.69E-46
MS.gene055397	MS.gene60296	0.859328	4.46E-63	-1.69E-46
MS.gene055412	MS.gene60296	0.80939	1.94E-50	-1.69E-46
MS.gene055499	MS.gene60296	0.82046	6.78E-53	-1.69E-46
MS.gene055502	MS.gene60296	0.80503	1.62E-49	-1.69E-46
MS.gene055533	MS.gene60296	0.851498	8.54E-61	-1.69E-46
MS.gene055636	MS.gene60296	0.811252	7.68E-51	-1.69E-46
MS.gene055647	MS.gene60296	0.860124	2.57E-63	-1.69E-46
MS.gene055722	MS.gene60296	0.829713	4.41E-55	-1.69E-46
MS.gene055896	MS.gene60296	0.812362	4.40E-51	-1.69E-46
MS.gene055909	MS.gene60296	0.809537	1.80E-50	-1.69E-46
MS.gene055911	MS.gene60296	0.812393	4.34E-51	-1.69E-46
MS.gene05592	MS.gene60296	0.87805	3.84E-69	-1.69E-46
MS.gene055941	MS.gene60296	0.830938	2.22E-55	-1.69E-46
MS.gene056191	MS.gene60296	0.813052	3.11E-51	-1.69E-46
MS.gene056374	MS.gene60296	0.844713	6.38E-59	-1.69E-46
MS.gene056407	MS.gene60296	0.819583	1.08E-52	-1.69E-46
MS.gene056410	MS.gene60296	0.801398	9.18E-49	-1.69E-46
MS.gene056422	MS.gene60296	0.840366	9.08E-58	-1.69E-46
MS.gene056511	MS.gene60296	0.847172	1.37E-59	-1.69E-46
MS.gene056549	MS.gene60296	0.804211	2.41E-49	-1.69E-46
MS.gene056609	MS.gene60296	0.81731	3.52E-52	-1.69E-46
MS.gene05664	MS.gene60296	0.801528	8.63E-49	-1.69E-46
MS.gene056657	MS.gene60296	0.827734	1.33E-54	-1.69E-46
MS.gene056942	MS.gene60296	0.802271	6.07E-49	-1.69E-46
MS.gene057011	MS.gene60296	0.840818	6.92E-58	-1.69E-46
MS.gene057076	MS.gene60296	0.814902	1.22E-51	-1.69E-46
MS.gene057123	MS.gene60296	0.836741	7.83E-57	-1.69E-46
MS.gene057129	MS.gene60296	0.86556	5.41E-65	-1.69E-46
MS.gene057146	MS.gene60296	0.873234	1.72E-67	-1.69E-46
MS.gene057285	MS.gene60296	0.833266	5.89E-56	-1.69E-46
MS.gene057295	MS.gene60296	0.804984	1.66E-49	-1.69E-46
MS.gene057331	MS.gene60296	0.811816	5.79E-51	-1.69E-46
MS.gene05735	MS.gene60296	0.844194	8.79E-59	-1.69E-46
MS.gene057416	MS.gene60296	0.863033	3.32E-64	-1.69E-46
MS.gene057449	MS.gene60296	0.807641	4.58E-50	-1.69E-46
MS.gene057450	MS.gene60296	0.805881	1.08E-49	-1.69E-46
MS.gene057734	MS.gene60296	0.822576	2.20E-53	-1.69E-46
MS.gene057823	MS.gene60296	0.807224	5.61E-50	-1.69E-46
MS.gene057856	MS.gene60296	0.80419	2.43E-49	-1.69E-46
MS.gene057926	MS.gene60296	0.874058	9.09E-68	-1.69E-46
MS.gene057927	MS.gene60296	0.832282	1.03E-55	-1.69E-46
MS.gene058006	MS.gene60296	0.823098	1.66E-53	-1.69E-46
MS.gene058019	MS.gene60296	0.848558	5.68E-60	-1.69E-46
MS.gene058293	MS.gene60296	0.847927	8.48E-60	-1.69E-46
MS.gene058323	MS.gene60296	0.819908	9.07E-53	-1.69E-46
MS.gene058419	MS.gene60296	0.827831	1.26E-54	-1.69E-46
MS.gene058660	MS.gene60296	0.874305	7.49E-68	-1.69E-46
MS.gene058928	MS.gene60296	0.813639	2.31E-51	-1.69E-46
MS.gene05907	MS.gene60296	0.80799	3.86E-50	-1.69E-46
MS.gene05934	MS.gene60296	0.836617	8.43E-57	-1.69E-46
MS.gene059368	MS.gene60296	0.822189	2.71E-53	-1.69E-46
MS.gene059536	MS.gene60296	0.855131	7.75E-62	-1.69E-46
MS.gene059597	MS.gene60296	0.820527	6.54E-53	-1.69E-46
MS.gene059676	MS.gene60296	0.83693	7.01E-57	-1.69E-46
MS.gene059688	MS.gene60296	0.865413	6.01E-65	-1.69E-46
MS.gene059692	MS.gene60296	0.853215	2.77E-61	-1.69E-46
MS.gene059695	MS.gene60296	0.853288	2.64E-61	-1.69E-46
MS.gene059711	MS.gene60296	0.857446	1.62E-62	-1.69E-46
MS.gene059718	MS.gene60296	0.804513	2.08E-49	-1.69E-46
MS.gene059807	MS.gene60296	0.818767	1.65E-52	-1.69E-46
MS.gene059902	MS.gene60296	0.815103	1.10E-51	-1.69E-46
MS.gene059960	MS.gene60296	0.854432	1.24E-61	-1.69E-46
MS.gene060193	MS.gene60296	0.845514	3.87E-59	-1.69E-46
MS.gene060403	MS.gene60296	0.825542	4.43E-54	-1.69E-46
MS.gene060482	MS.gene60296	0.80992	1.49E-50	-1.69E-46
MS.gene060804	MS.gene60296	0.878448	2.79E-69	-1.69E-46
MS.gene060818	MS.gene60296	0.870709	1.19E-66	-1.69E-46
MS.gene060835	MS.gene60296	0.803903	2.79E-49	-1.69E-46
MS.gene060837	MS.gene60296	0.858186	9.79E-63	-1.69E-46
MS.gene06092	MS.gene60296	0.804548	2.05E-49	-1.69E-46
MS.gene061041	MS.gene60296	0.851182	1.05E-60	-1.69E-46
MS.gene061051	MS.gene60296	-0.84089	6.62E-58	-1.69E-46
MS.gene061134	MS.gene60296	0.842014	3.35E-58	-1.69E-46
MS.gene061200	MS.gene60296	0.888018	8.56E-73	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60296.t1	MTR_1g012690	79.870	154	28	1	1	151	1	154	1.48e-72	214
MS.gene60296.t1	MTR_1g012700	73.780	164	30	1	1	151	1	164	2.56e-72	214
MS.gene60296.t1	MTR_1g012710	96.026	151	6	0	1	151	1	151	8.87e-69	205
MS.gene60296.t1	MTR_1g012630	54.630	216	27	4	1	151	1	210	3.01e-55	172
MS.gene60296.t1	MTR_3g106740	61.589	151	35	3	1	150	1	129	2.31e-46	147
MS.gene60296.t1	MTR_4g101330	46.429	168	72	3	1	150	1	168	1.29e-37	126
MS.gene60296.t1	MTR_3g106750	57.792	154	37	3	1	151	1	129	6.31e-36	121
MS.gene60296.t1	MTR_4g108150	55.556	108	40	2	47	151	21	123	2.06e-34	117
MS.gene60296.t1	MTR_4g101260	63.855	83	30	0	69	151	50	132	4.64e-33	114
MS.gene60296.t1	MTR_4g101280	63.636	88	31	1	65	151	56	143	6.04e-32	111
MS.gene60296.t1	MTR_4g101310	59.091	88	35	1	65	151	47	134	2.61e-31	109
MS.gene60296.t1	MTR_2g026760	55.556	90	39	1	62	151	39	127	8.60e-27	97.8
MS.gene60296.t1	MTR_5g012340	50.575	87	41	2	65	150	91	176	1.40e-25	96.3
MS.gene60296.t1	MTR_5g012380	49.425	87	42	2	65	150	84	169	4.72e-25	94.7
MS.gene60296.t1	MTR_4g101270	52.941	85	38	2	67	150	103	186	2.39e-23	90.9
MS.gene60296.t1	MTR_2g026930	44.706	85	43	2	67	151	119	199	8.93e-20	81.6
MS.gene60296.t1	MTR_2g026920	44.706	85	43	2	67	151	115	195	1.90e-19	80.9
MS.gene60296.t1	MTR_3g082100	52.326	86	39	2	66	150	251	335	1.21e-17	78.2
MS.gene60296.t1	MTR_2g026775	44.872	78	38	2	76	151	686	760	3.39e-17	77.8
MS.gene60296.t1	MTR_4g115360	53.571	84	37	2	69	151	151	233	4.42e-13	64.7
MS.gene60296.t1	MTR_2g026820	50.000	70	31	2	74	142	542	608	6.35e-13	65.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene60296.t1	AT4G12490	45.055	182	69	3	1	151	1	182	4.62e-42	138
MS.gene60296.t1	AT2G45180	75.904	83	20	0	69	151	52	134	1.95e-39	130
MS.gene60296.t1	AT4G12470	66.292	89	29	1	64	151	73	161	1.50e-36	123
MS.gene60296.t1	AT4G12480	67.045	88	28	1	65	151	81	168	1.10e-35	121
MS.gene60296.t1	AT4G12500	64.773	88	30	1	65	151	90	177	5.99e-35	120
MS.gene60296.t1	AT1G62510	66.667	84	27	1	68	150	66	149	5.23e-33	114
MS.gene60296.t1	AT4G00165	49.533	107	48	2	45	150	27	128	3.12e-31	109
MS.gene60296.t1	AT4G00165	49.533	107	48	2	45	150	27	128	3.12e-31	109
MS.gene60296.t1	AT4G12520	47.059	153	55	4	1	151	1	129	1.16e-30	107
MS.gene60296.t1	AT4G12510	47.059	153	55	4	1	151	1	129	1.16e-30	107
MS.gene60296.t1	AT1G12100	43.151	146	60	4	7	151	9	132	1.47e-30	107
MS.gene60296.t1	AT5G46890	61.957	92	32	2	60	151	39	127	3.21e-30	106
MS.gene60296.t1	AT1G12090	65.000	80	27	1	72	150	58	137	1.42e-29	105
MS.gene60296.t1	AT5G46900	66.250	80	25	1	72	151	50	127	4.04e-29	103
MS.gene60296.t1	AT3G22142	56.701	97	39	3	55	150	1384	1478	2.66e-27	106
MS.gene60296.t1	AT4G12550	49.451	91	45	1	62	151	21	111	6.15e-27	97.8
MS.gene60296.t1	AT4G22460	47.059	119	44	2	32	149	31	131	3.08e-26	96.7
MS.gene60296.t1	AT4G12530	50.588	85	42	0	66	150	31	115	1.08e-25	94.7
MS.gene60296.t1	AT4G12545	50.549	91	41	2	62	151	21	108	1.54e-24	91.7
MS.gene60296.t1	AT2G10940	57.143	84	34	2	69	151	208	290	3.58e-23	92.4
MS.gene60296.t1	AT2G10940	57.143	84	34	2	69	151	208	290	3.58e-23	92.4
MS.gene60296.t1	AT3G22120	56.977	86	34	3	67	150	265	349	3.19e-21	88.2
MS.gene60296.t1	AT3G22120	56.977	86	34	3	67	150	248	332	5.12e-21	87.4
MS.gene60296.t1	AT4G15160	52.326	86	39	2	67	150	97	182	2.90e-19	80.1
MS.gene60296.t1	AT4G15160	52.326	86	39	2	67	150	179	264	4.98e-19	81.3
MS.gene60296.t1	AT1G62500	48.193	83	41	2	69	150	212	293	8.39e-19	80.9
MS.gene60296.t1	AT4G22490	38.710	93	50	3	61	150	28	116	3.16e-15	67.8

Find 34 sgRNAs with CRISPR-Local

Find 39 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GGAGAGAAAATAATATAATT+AGG	0.201862	1.1:-8398595	None:intergenic
TTGCCTTTGTACTGCTATTA+AGG	0.221337	1.1:+8398907	MS.gene60296:CDS
GCTATTAAGGCTAATGTTCT+TGG	0.285703	1.1:+8398920	MS.gene60296:CDS
GCTTCAAGGTTTGGTTGATT+TGG	0.319262	1.1:+8398874	MS.gene60296:CDS
CTAGGCTTTGGCTTTGGCTT+AGG	0.338065	1.1:-8398677	None:intergenic
TTTGGCTTTGGCTTAGGCTT+AGG	0.367383	1.1:-8398671	None:intergenic
GGAGGACTAGGCTTTGGCTT+TGG	0.385876	1.1:-8398683	None:intergenic
GCTGGTGGAGGACTAGGCTT+TGG	0.388141	1.1:-8398689	None:intergenic
GGTGTGTGTGCTGATGTTCT+AGG	0.388503	1.1:+8398800	MS.gene60296:CDS
GAGAGAAAATAATATAATTA+GGG	0.389348	1.1:-8398594	None:intergenic
GGACTTGTTAATATTATTGT+TGG	0.394838	1.1:+8398821	MS.gene60296:CDS
AAGTGTTGTGCATTGCTTCA+AGG	0.409572	1.1:+8398860	MS.gene60296:CDS
TTGTGCATTGCTTCAAGGTT+TGG	0.410333	1.1:+8398865	MS.gene60296:CDS
AATTAGGGCACTAAGCTTGT+TGG	0.421182	1.1:-8398579	None:intergenic
GGTGAAGCTGGTGGAGGACT+AGG	0.427892	1.1:-8398695	None:intergenic
GGACATGGTGTTGGTGAAGC+TGG	0.438461	1.1:-8398707	None:intergenic
AGTAGGAGACTGAGTGTGAT+AGG	0.453246	1.1:-8398959	None:intergenic
GGAGGTGTTGCTGAAGGTGT+TGG	0.497717	1.1:-8398731	None:intergenic
GCTGAAGGTGTTGGAGGACA+TGG	0.512621	1.1:-8398722	None:intergenic
ACAAGAAAGTCTATGAACAT+TGG	0.516294	1.1:-8399015	None:intergenic
TGTGATGTTGAAGGAGTAGG+AGG	0.527946	1.1:-8398749	None:intergenic
TTAGGCTTAGGAGATGGAGT+TGG	0.532997	1.1:-8398659	None:intergenic
TTTGGCTTAGGCTTAGGAGA+TGG	0.535668	1.1:-8398665	None:intergenic
GCACAACACTTGCTAGAAGC+AGG	0.549118	1.1:-8398848	None:intergenic
GTGAAAATGTTGCATAAGCA+AGG	0.554272	1.1:-8398616	None:intergenic
CCTACTGACACATTAAAGCT+AGG	0.564359	1.1:+8398779	MS.gene60296:CDS
CATGGTGTTGGTGAAGCTGG+TGG	0.586112	1.1:-8398704	None:intergenic
GGAGTAGGAGGTGTTGCTGA+AGG	0.590328	1.1:-8398737	None:intergenic
GGTGTTGGAGGACATGGTGT+TGG	0.594079	1.1:-8398716	None:intergenic
GGTGTTGGTGAAGCTGGTGG+AGG	0.615450	1.1:-8398701	None:intergenic
CCTAGCTTTAATGTGTCAGT+AGG	0.615781	1.1:-8398779	None:intergenic
GGTGTTGCTGAAGGTGTTGG+AGG	0.621506	1.1:-8398728	None:intergenic
TAGCCTTAATAGCAGTACAA+AGG	0.655083	1.1:-8398910	None:intergenic
TATGAACATTGGAAACCCGA+AGG	0.685560	1.1:-8399004	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	GAGAGAAAATAATATAATTA+GGG	-	chr1.1:8398597-8398616	None:intergenic	15.0%
!!	GGAGAGAAAATAATATAATT+AGG	-	chr1.1:8398598-8398617	None:intergenic	20.0%
!!!	GGACTTGTTAATATTATTGT+TGG	+	chr1.1:8398821-8398840	MS.gene60296:CDS	25.0%
	TTGTGAAAAATCTGTTCCTT+CGG	+	chr1.1:8398988-8399007	MS.gene60296:CDS	30.0%
!	ATTTTTCACAAGCACTAAGT+AGG	-	chr1.1:8398979-8398998	None:intergenic	30.0%
	GCTATTAAGGCTAATGTTCT+TGG	+	chr1.1:8398920-8398939	MS.gene60296:CDS	35.0%
	GTGAAAATGTTGCATAAGCA+AGG	-	chr1.1:8398619-8398638	None:intergenic	35.0%
	TGTGAAAAATCTGTTCCTTC+GGG	+	chr1.1:8398989-8399008	MS.gene60296:CDS	35.0%
	TTGCCTTTGTACTGCTATTA+AGG	+	chr1.1:8398907-8398926	MS.gene60296:CDS	35.0%
!	GGACATTTTTGTGATGTTGA+AGG	-	chr1.1:8398761-8398780	None:intergenic	35.0%
!	TAGCCTTAATAGCAGTACAA+AGG	-	chr1.1:8398913-8398932	None:intergenic	35.0%
!	TTTTGTGATGTTGAAGGAGT+AGG	-	chr1.1:8398755-8398774	None:intergenic	35.0%
	CCTACTGACACATTAAAGCT+AGG	+	chr1.1:8398779-8398798	MS.gene60296:CDS	40.0%
	TATGAACATTGGAAACCCGA+AGG	-	chr1.1:8399007-8399026	None:intergenic	40.0%
	TTGTGCATTGCTTCAAGGTT+TGG	+	chr1.1:8398865-8398884	MS.gene60296:CDS	40.0%
!	AAGTGTTGTGCATTGCTTCA+AGG	+	chr1.1:8398860-8398879	MS.gene60296:CDS	40.0%
!	AATTAGGGCACTAAGCTTGT+TGG	-	chr1.1:8398582-8398601	None:intergenic	40.0%
!	GCAACATTTTCACATGCTTG+TGG	+	chr1.1:8398626-8398645	MS.gene60296:CDS	40.0%
!	GCTTCAAGGTTTGGTTGATT+TGG	+	chr1.1:8398874-8398893	MS.gene60296:CDS	40.0%
!!	CCTAGCTTTAATGTGTCAGT+AGG	-	chr1.1:8398782-8398801	None:intergenic	40.0%
	AGTAGGAGACTGAGTGTGAT+AGG	-	chr1.1:8398962-8398981	None:intergenic	45.0%
	TGTGATGTTGAAGGAGTAGG+AGG	-	chr1.1:8398752-8398771	None:intergenic	45.0%
	TTAGGCTTAGGAGATGGAGT+TGG	-	chr1.1:8398662-8398681	None:intergenic	45.0%
!	TTTGGCTTAGGCTTAGGAGA+TGG	-	chr1.1:8398668-8398687	None:intergenic	45.0%
!!	TTTGGCTTTGGCTTAGGCTT+AGG	-	chr1.1:8398674-8398693	None:intergenic	45.0%
!	GCACAACACTTGCTAGAAGC+AGG	-	chr1.1:8398851-8398870	None:intergenic	50.0%
!	GGTGTGTGTGCTGATGTTCT+AGG	+	chr1.1:8398800-8398819	MS.gene60296:CDS	50.0%
!!	CTAGGCTTTGGCTTTGGCTT+AGG	-	chr1.1:8398680-8398699	None:intergenic	50.0%
!	GGAGGACTAGGCTTTGGCTT+TGG	-	chr1.1:8398686-8398705	None:intergenic	55.0%
!	GGTGTTGGAGGACATGGTGT+TGG	-	chr1.1:8398719-8398738	None:intergenic	55.0%
!!	CATGGTGTTGGTGAAGCTGG+TGG	-	chr1.1:8398707-8398726	None:intergenic	55.0%
!!	GCTGAAGGTGTTGGAGGACA+TGG	-	chr1.1:8398725-8398744	None:intergenic	55.0%
!!	GGACATGGTGTTGGTGAAGC+TGG	-	chr1.1:8398710-8398729	None:intergenic	55.0%
!!	GGAGGTGTTGCTGAAGGTGT+TGG	-	chr1.1:8398734-8398753	None:intergenic	55.0%
!!	GGAGTAGGAGGTGTTGCTGA+AGG	-	chr1.1:8398740-8398759	None:intergenic	55.0%
!!	GGTGTTGCTGAAGGTGTTGG+AGG	-	chr1.1:8398731-8398750	None:intergenic	55.0%
	GCTGGTGGAGGACTAGGCTT+TGG	-	chr1.1:8398692-8398711	None:intergenic	60.0%
	GGTGAAGCTGGTGGAGGACT+AGG	-	chr1.1:8398698-8398717	None:intergenic	60.0%
!!	GGTGTTGGTGAAGCTGGTGG+AGG	-	chr1.1:8398704-8398723	None:intergenic	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr1.1	gene	8398572	8399027	8398572	ID=MS.gene60296
chr1.1	mRNA	8398572	8399027	8398572	ID=MS.gene60296.t1;Parent=MS.gene60296
chr1.1	exon	8398572	8399027	8398572	ID=MS.gene60296.t1.exon1;Parent=MS.gene60296.t1
chr1.1	CDS	8398572	8399027	8398572	ID=cds.MS.gene60296.t1;Parent=MS.gene60296.t1

Gene Sequence

>MS.gene60296

ATGGCTTCCAACAAGCTTAGTGCCCTAATTATATTATTTTCTCTCCTTGCTTATGCAACATTTTCACATGCTTGTGGTTCATGCAAACCAACTCCATCTCCTAAGCCTAAGCCAAAGCCAAAGCCTAGTCCTCCACCAGCTTCACCAACACCATGTCCTCCAACACCTTCAGCAACACCTCCTACTCCTTCAACATCACAAAAATGTCCTACTGACACATTAAAGCTAGGTGTGTGTGCTGATGTTCTAGGACTTGTTAATATTATTGTTGGAAGTCCTGCTTCTAGCAAGTGTTGTGCATTGCTTCAAGGTTTGGTTGATTTGGATGCAGCAATTTGCCTTTGTACTGCTATTAAGGCTAATGTTCTTGGTATCAACTTGAATGTTCCTATCACACTCAGTCTCCTACTTAGTGCTTGTGAAAAATCTGTTCCTTCGGGTTTCCAATGTTCATAG

Protein sequence

>MS.gene60296.t1

MASNKLSALIILFSLLAYATFSHACGSCKPTPSPKPKPKPKPSPPPASPTPCPPTPSATPPTPSTSQKCPTDTLKLGVCADVLGLVNIIVGSPASSKCCALLQGLVDLDAAICLCTAIKANVLGINLNVPITLSLLLSACEKSVPSGFQCS