Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77650.t1 | RHN74509.1 | 97.6 | 328 | 8 | 0 | 1 | 328 | 1 | 328 | 1.00E-151 | 546.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77650.t1 | Q84X53 | 34.1 | 123 | 78 | 2 | 65 | 184 | 27 | 149 | 3.9e-14 | 80.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77650.t1 | A0A396J8D7 | 97.6 | 328 | 8 | 0 | 1 | 328 | 1 | 328 | 7.5e-152 | 546.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|---|---|
| MS.gene77650.t1 | TR | mTERF |
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene77650 | 0.85313 | 2.93E-61 | -1.69E-46 |
| MS.gene049217 | MS.gene77650 | 0.821856 | 3.23E-53 | -1.69E-46 |
| MS.gene049222 | MS.gene77650 | 0.836924 | 7.04E-57 | -1.69E-46 |
| MS.gene049232 | MS.gene77650 | 0.834742 | 2.51E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene77650 | 0.88506 | 1.13E-71 | -1.69E-46 |
| MS.gene049313 | MS.gene77650 | -0.800634 | 1.31E-48 | -1.69E-46 |
| MS.gene049320 | MS.gene77650 | 0.900538 | 6.63E-78 | -1.69E-46 |
| MS.gene049600 | MS.gene77650 | 0.836553 | 8.75E-57 | -1.69E-46 |
| MS.gene049609 | MS.gene77650 | 0.814091 | 1.84E-51 | -1.69E-46 |
| MS.gene049627 | MS.gene77650 | 0.835575 | 1.55E-56 | -1.69E-46 |
| MS.gene049633 | MS.gene77650 | 0.843686 | 1.20E-58 | -1.69E-46 |
| MS.gene05010 | MS.gene77650 | 0.858785 | 6.49E-63 | -1.69E-46 |
| MS.gene050163 | MS.gene77650 | 0.891776 | 2.92E-74 | -1.69E-46 |
| MS.gene050165 | MS.gene77650 | 0.884985 | 1.20E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene77650 | 0.805746 | 1.15E-49 | -1.69E-46 |
| MS.gene050323 | MS.gene77650 | 0.827396 | 1.60E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene77650 | 0.853831 | 1.84E-61 | -1.69E-46 |
| MS.gene050496 | MS.gene77650 | 0.823833 | 1.12E-53 | -1.69E-46 |
| MS.gene050504 | MS.gene77650 | 0.898602 | 4.52E-77 | -1.69E-46 |
| MS.gene050518 | MS.gene77650 | 0.897838 | 9.53E-77 | -1.69E-46 |
| MS.gene050577 | MS.gene77650 | 0.886567 | 3.06E-72 | -1.69E-46 |
| MS.gene050612 | MS.gene77650 | 0.906134 | 2.05E-80 | -1.69E-46 |
| MS.gene050675 | MS.gene77650 | 0.871105 | 8.81E-67 | -1.69E-46 |
| MS.gene050699 | MS.gene77650 | 0.898405 | 5.48E-77 | -1.69E-46 |
| MS.gene050747 | MS.gene77650 | 0.806474 | 8.08E-50 | -1.69E-46 |
| MS.gene050772 | MS.gene77650 | 0.846626 | 1.93E-59 | -1.69E-46 |
| MS.gene05080 | MS.gene77650 | 0.805508 | 1.29E-49 | -1.69E-46 |
| MS.gene050868 | MS.gene77650 | 0.802142 | 6.46E-49 | -1.69E-46 |
| MS.gene050871 | MS.gene77650 | 0.800743 | 1.25E-48 | -1.69E-46 |
| MS.gene050876 | MS.gene77650 | 0.848724 | 5.11E-60 | -1.69E-46 |
| MS.gene05087 | MS.gene77650 | 0.816259 | 6.06E-52 | -1.69E-46 |
| MS.gene050883 | MS.gene77650 | -0.806811 | 6.86E-50 | -1.69E-46 |
| MS.gene050950 | MS.gene77650 | 0.816966 | 4.21E-52 | -1.69E-46 |
| MS.gene050986 | MS.gene77650 | 0.907574 | 4.38E-81 | -1.69E-46 |
| MS.gene05100 | MS.gene77650 | 0.843715 | 1.18E-58 | -1.69E-46 |
| MS.gene051127 | MS.gene77650 | -0.80774 | 4.36E-50 | -1.69E-46 |
| MS.gene05118 | MS.gene77650 | 0.808473 | 3.04E-50 | -1.69E-46 |
| MS.gene051268 | MS.gene77650 | 0.805628 | 1.22E-49 | -1.69E-46 |
| MS.gene051317 | MS.gene77650 | 0.853306 | 2.61E-61 | -1.69E-46 |
| MS.gene051509 | MS.gene77650 | 0.806761 | 7.03E-50 | -1.69E-46 |
| MS.gene051551 | MS.gene77650 | 0.870692 | 1.20E-66 | -1.69E-46 |
| MS.gene051810 | MS.gene77650 | 0.868663 | 5.52E-66 | -1.69E-46 |
| MS.gene052164 | MS.gene77650 | 0.835235 | 1.89E-56 | -1.69E-46 |
| MS.gene052271 | MS.gene77650 | 0.822378 | 2.45E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene77650 | 0.826133 | 3.21E-54 | -1.69E-46 |
| MS.gene052486 | MS.gene77650 | 0.84443 | 7.60E-59 | -1.69E-46 |
| MS.gene052506 | MS.gene77650 | 0.813752 | 2.18E-51 | -1.69E-46 |
| MS.gene052615 | MS.gene77650 | 0.824887 | 6.33E-54 | -1.69E-46 |
| MS.gene052822 | MS.gene77650 | 0.824249 | 8.94E-54 | -1.69E-46 |
| MS.gene052916 | MS.gene77650 | 0.85853 | 7.73E-63 | -1.69E-46 |
| MS.gene052966 | MS.gene77650 | 0.81906 | 1.42E-52 | -1.69E-46 |
| MS.gene053203 | MS.gene77650 | 0.846523 | 2.06E-59 | -1.69E-46 |
| MS.gene053207 | MS.gene77650 | 0.804226 | 2.39E-49 | -1.69E-46 |
| MS.gene053213 | MS.gene77650 | 0.882809 | 7.63E-71 | -1.69E-46 |
| MS.gene053286 | MS.gene77650 | 0.890097 | 1.34E-73 | -1.69E-46 |
| MS.gene053436 | MS.gene77650 | 0.821 | 5.10E-53 | -1.69E-46 |
| MS.gene053574 | MS.gene77650 | 0.841157 | 5.64E-58 | -1.69E-46 |
| MS.gene053626 | MS.gene77650 | 0.803296 | 3.73E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene77650 | 0.804869 | 1.76E-49 | -1.69E-46 |
| MS.gene054374 | MS.gene77650 | 0.804124 | 2.51E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene77650 | 0.826437 | 2.71E-54 | -1.69E-46 |
| MS.gene054600 | MS.gene77650 | 0.846493 | 2.10E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene77650 | 0.877112 | 8.16E-69 | -1.69E-46 |
| MS.gene05470 | MS.gene77650 | 0.84269 | 2.22E-58 | -1.69E-46 |
| MS.gene054954 | MS.gene77650 | 0.894922 | 1.56E-75 | -1.69E-46 |
| MS.gene055362 | MS.gene77650 | 0.900554 | 6.53E-78 | -1.69E-46 |
| MS.gene055502 | MS.gene77650 | 0.858075 | 1.06E-62 | -1.69E-46 |
| MS.gene055577 | MS.gene77650 | 0.838746 | 2.39E-57 | -1.69E-46 |
| MS.gene055634 | MS.gene77650 | 0.801971 | 7.00E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene77650 | 0.815282 | 1.00E-51 | -1.69E-46 |
| MS.gene055722 | MS.gene77650 | 0.828282 | 9.80E-55 | -1.69E-46 |
| MS.gene055748 | MS.gene77650 | 0.843967 | 1.01E-58 | -1.69E-46 |
| MS.gene055750 | MS.gene77650 | 0.839502 | 1.53E-57 | -1.69E-46 |
| MS.gene055751 | MS.gene77650 | 0.851964 | 6.30E-61 | -1.69E-46 |
| MS.gene055776 | MS.gene77650 | 0.867768 | 1.07E-65 | -1.69E-46 |
| MS.gene055849 | MS.gene77650 | 0.812529 | 4.05E-51 | -1.69E-46 |
| MS.gene05589 | MS.gene77650 | 0.829207 | 5.86E-55 | -1.69E-46 |
| MS.gene056083 | MS.gene77650 | 0.811379 | 7.21E-51 | -1.69E-46 |
| MS.gene056374 | MS.gene77650 | 0.878463 | 2.75E-69 | -1.69E-46 |
| MS.gene056409 | MS.gene77650 | 0.823244 | 1.54E-53 | -1.69E-46 |
| MS.gene056450 | MS.gene77650 | 0.810451 | 1.15E-50 | -1.69E-46 |
| MS.gene056504 | MS.gene77650 | 0.870614 | 1.28E-66 | -1.69E-46 |
| MS.gene056510 | MS.gene77650 | 0.873926 | 1.01E-67 | -1.69E-46 |
| MS.gene056549 | MS.gene77650 | 0.814306 | 1.65E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene77650 | 0.830424 | 2.96E-55 | -1.69E-46 |
| MS.gene056657 | MS.gene77650 | 0.890087 | 1.35E-73 | -1.69E-46 |
| MS.gene056692 | MS.gene77650 | 0.858382 | 8.56E-63 | -1.69E-46 |
| MS.gene057331 | MS.gene77650 | 0.823402 | 1.41E-53 | -1.69E-46 |
| MS.gene057416 | MS.gene77650 | 0.823788 | 1.15E-53 | -1.69E-46 |
| MS.gene057831 | MS.gene77650 | 0.847113 | 1.42E-59 | -1.69E-46 |
| MS.gene057986 | MS.gene77650 | 0.837705 | 4.44E-57 | -1.69E-46 |
| MS.gene05837 | MS.gene77650 | 0.815171 | 1.06E-51 | -1.69E-46 |
| MS.gene058419 | MS.gene77650 | 0.878923 | 1.90E-69 | -1.69E-46 |
| MS.gene058544 | MS.gene77650 | 0.852162 | 5.53E-61 | -1.69E-46 |
| MS.gene058719 | MS.gene77650 | 0.822258 | 2.61E-53 | -1.69E-46 |
| MS.gene058723 | MS.gene77650 | 0.817082 | 3.96E-52 | -1.69E-46 |
| MS.gene058773 | MS.gene77650 | 0.850658 | 1.47E-60 | -1.69E-46 |
| MS.gene058838 | MS.gene77650 | 0.802253 | 6.12E-49 | -1.69E-46 |
| MS.gene05883 | MS.gene77650 | 0.807461 | 5.00E-50 | -1.69E-46 |
| MS.gene059022 | MS.gene77650 | 0.906307 | 1.71E-80 | -1.69E-46 |
| MS.gene059023 | MS.gene77650 | 0.829141 | 6.08E-55 | -1.69E-46 |
| MS.gene059367 | MS.gene77650 | 0.800359 | 1.50E-48 | -1.69E-46 |
| MS.gene059677 | MS.gene77650 | 0.880427 | 5.54E-70 | -1.69E-46 |
| MS.gene059718 | MS.gene77650 | 0.862162 | 6.16E-64 | -1.69E-46 |
| MS.gene059756 | MS.gene77650 | 0.852065 | 5.89E-61 | -1.69E-46 |
| MS.gene059837 | MS.gene77650 | 0.843475 | 1.37E-58 | -1.69E-46 |
| MS.gene059865 | MS.gene77650 | 0.876257 | 1.61E-68 | -1.69E-46 |
| MS.gene06000 | MS.gene77650 | 0.809681 | 1.68E-50 | -1.69E-46 |
| MS.gene060482 | MS.gene77650 | 0.808679 | 2.75E-50 | -1.69E-46 |
| MS.gene060703 | MS.gene77650 | 0.87281 | 2.39E-67 | -1.69E-46 |
| MS.gene060762 | MS.gene77650 | 0.84437 | 7.89E-59 | -1.69E-46 |
| MS.gene060778 | MS.gene77650 | 0.818976 | 1.48E-52 | -1.69E-46 |
| MS.gene06077 | MS.gene77650 | 0.889108 | 3.25E-73 | -1.69E-46 |
| MS.gene06092 | MS.gene77650 | 0.806823 | 6.82E-50 | -1.69E-46 |
| MS.gene060982 | MS.gene77650 | 0.877655 | 5.28E-69 | -1.69E-46 |
| MS.gene061134 | MS.gene77650 | 0.804558 | 2.04E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene77650 | 0.86178 | 8.07E-64 | -1.69E-46 |
| MS.gene061171 | MS.gene77650 | 0.806964 | 6.37E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene75815 | MS.gene77650 | PPI |
| MS.gene97055 | MS.gene77650 | PPI |
| MS.gene77650 | MS.gene059518 | PPI |
| MS.gene56084 | MS.gene77650 | PPI |
| MS.gene067125 | MS.gene77650 | PPI |
| MS.gene77650 | MS.gene006937 | PPI |
| MS.gene77650 | MS.gene033812 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77650.t1 | MTR_2g067230 | 97.256 | 328 | 9 | 0 | 1 | 328 | 1 | 328 | 0.0 | 660 |
| MS.gene77650.t1 | MTR_0320s0040 | 85.246 | 122 | 18 | 0 | 36 | 157 | 15 | 136 | 8.42e-71 | 219 |
| MS.gene77650.t1 | MTR_2g049780 | 39.662 | 237 | 138 | 2 | 69 | 300 | 69 | 305 | 1.63e-57 | 188 |
| MS.gene77650.t1 | MTR_5g041630 | 36.508 | 252 | 151 | 3 | 60 | 304 | 48 | 297 | 4.55e-48 | 164 |
| MS.gene77650.t1 | MTR_7g081270 | 31.923 | 260 | 161 | 7 | 51 | 299 | 25 | 279 | 1.94e-33 | 125 |
| MS.gene77650.t1 | MTR_5g094610 | 26.639 | 244 | 161 | 6 | 70 | 296 | 227 | 469 | 1.72e-25 | 106 |
| MS.gene77650.t1 | MTR_4g070060 | 28.077 | 260 | 173 | 7 | 69 | 316 | 345 | 602 | 3.81e-23 | 100 |
| MS.gene77650.t1 | MTR_2g034600 | 29.464 | 224 | 146 | 5 | 87 | 303 | 268 | 486 | 2.00e-22 | 97.8 |
| MS.gene77650.t1 | MTR_2g034600 | 29.464 | 224 | 146 | 5 | 87 | 303 | 333 | 551 | 2.30e-22 | 98.2 |
| MS.gene77650.t1 | MTR_2g034600 | 29.464 | 224 | 146 | 5 | 87 | 303 | 329 | 547 | 2.34e-22 | 97.8 |
| MS.gene77650.t1 | MTR_6g003960 | 27.919 | 197 | 135 | 2 | 87 | 277 | 370 | 565 | 5.24e-21 | 94.0 |
| MS.gene77650.t1 | MTR_6g003960 | 26.263 | 198 | 123 | 6 | 65 | 255 | 392 | 573 | 9.37e-14 | 72.4 |
| MS.gene77650.t1 | MTR_4g084630 | 26.966 | 178 | 121 | 2 | 129 | 300 | 145 | 319 | 9.62e-16 | 77.4 |
| MS.gene77650.t1 | MTR_5g068860 | 21.739 | 276 | 169 | 5 | 75 | 304 | 213 | 487 | 2.55e-15 | 77.0 |
| MS.gene77650.t1 | MTR_1g115415 | 23.373 | 338 | 166 | 12 | 75 | 326 | 145 | 475 | 7.20e-14 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene77650.t1 | AT2G36000 | 55.985 | 259 | 110 | 3 | 70 | 324 | 74 | 332 | 1.41e-99 | 297 |
| MS.gene77650.t1 | AT2G36000 | 57.083 | 240 | 99 | 3 | 70 | 305 | 74 | 313 | 3.58e-94 | 283 |
| MS.gene77650.t1 | AT2G34620 | 40.000 | 240 | 139 | 2 | 69 | 303 | 55 | 294 | 4.79e-59 | 192 |
| MS.gene77650.t1 | AT2G03050 | 38.403 | 263 | 149 | 6 | 50 | 303 | 15 | 273 | 2.10e-53 | 177 |
| MS.gene77650.t1 | AT2G03050 | 38.403 | 263 | 149 | 6 | 50 | 303 | 14 | 272 | 2.20e-53 | 177 |
| MS.gene77650.t1 | AT3G18870 | 31.020 | 245 | 155 | 5 | 66 | 302 | 33 | 271 | 8.26e-35 | 128 |
| MS.gene77650.t1 | AT5G55580 | 25.926 | 243 | 164 | 6 | 70 | 296 | 114 | 356 | 1.35e-25 | 105 |
| MS.gene77650.t1 | AT5G55580 | 25.926 | 243 | 164 | 6 | 70 | 296 | 220 | 462 | 3.45e-25 | 105 |
| MS.gene77650.t1 | AT4G14605 | 26.033 | 242 | 170 | 5 | 66 | 300 | 229 | 468 | 1.63e-21 | 95.5 |
| MS.gene77650.t1 | AT4G14605 | 26.033 | 242 | 170 | 5 | 66 | 300 | 229 | 468 | 1.63e-21 | 95.5 |
| MS.gene77650.t1 | AT1G78930 | 26.904 | 197 | 137 | 2 | 87 | 277 | 357 | 552 | 2.48e-20 | 92.0 |
| MS.gene77650.t1 | AT2G21710 | 28.629 | 248 | 161 | 7 | 69 | 303 | 352 | 596 | 1.11e-19 | 90.1 |
| MS.gene77650.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 1.05e-15 | 77.0 |
| MS.gene77650.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 1.05e-15 | 77.0 |
| MS.gene77650.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 1.44e-15 | 77.0 |
| MS.gene77650.t1 | AT4G38160 | 25.106 | 235 | 163 | 6 | 55 | 277 | 65 | 298 | 2.21e-15 | 76.6 |
| MS.gene77650.t1 | AT2G44020 | 23.134 | 268 | 159 | 8 | 89 | 311 | 203 | 468 | 7.01e-15 | 75.5 |
| MS.gene77650.t1 | AT4G02990 | 23.741 | 278 | 163 | 8 | 73 | 303 | 219 | 494 | 1.10e-12 | 68.9 |
| MS.gene77650.t1 | AT4G02990 | 23.741 | 278 | 163 | 8 | 73 | 303 | 219 | 494 | 1.10e-12 | 68.9 |
Find 83 sgRNAs with CRISPR-Local
Find 192 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTATAGTATTAAGAATAATT+TGG | 0.227622 | 2.3:-29602680 | MS.gene77650:CDS |
| TTTGCAAACCCTTTCATTCT+AGG | 0.246141 | 2.3:-29604870 | MS.gene77650:CDS |
| TCACTAGTCTTTAATAATAA+AGG | 0.282485 | 2.3:+29602511 | None:intergenic |
| CAAAGACGAGTGAAGGATTT+GGG | 0.291354 | 2.3:+29604889 | None:intergenic |
| ACCACAAAGTAATTGTATTT+AGG | 0.292252 | 2.3:+29602655 | None:intergenic |
| TGCAATTGAGTTTCGGCGTT+TGG | 0.299697 | 2.3:-29603034 | MS.gene77650:CDS |
| CAATTACTTTGTGGTGGAAA+TGG | 0.302908 | 2.3:-29602647 | MS.gene77650:CDS |
| ATCGAATACTTTGAAAATAT+CGG | 0.309283 | 2.3:-29602757 | MS.gene77650:CDS |
| ACATAAACGGTGTGTAGAAA+TGG | 0.346811 | 2.3:-29602551 | MS.gene77650:CDS |
| ATGTATTACAGGTTGTAAAA+TGG | 0.349290 | 2.3:-29603236 | MS.gene77650:intron |
| GCAAAGACGAGTGAAGGATT+TGG | 0.354919 | 2.3:+29604888 | None:intergenic |
| AATTACTTTGTGGTGGAAAT+GGG | 0.364045 | 2.3:-29602646 | MS.gene77650:CDS |
| TCTCATTTAGCTTAGAGAAT+AGG | 0.372077 | 2.3:-29602585 | MS.gene77650:CDS |
| CTACCTCCCAACACTGATAC+TGG | 0.373802 | 2.3:-29603195 | MS.gene77650:CDS |
| TTGGGAGGTAGAGTTTGATT+TGG | 0.389507 | 2.3:+29603207 | None:intergenic |
| ATTTCTCTGCAATTGAGTTT+CGG | 0.390370 | 2.3:-29603041 | MS.gene77650:CDS |
| CGACACTACATGATAGCAAA+TGG | 0.394976 | 2.3:+29602800 | None:intergenic |
| CCTCTTCTATGCCAATACTT+TGG | 0.410530 | 2.3:+29602836 | None:intergenic |
| CCTTGAAAACATCTCCTTTG+TGG | 0.416787 | 2.3:-29602441 | MS.gene77650:CDS |
| TTGCAAACCCTTTCATTCTA+GGG | 0.423352 | 2.3:-29604869 | MS.gene77650:CDS |
| ACTTTGGTGGTAAGAATCTC+CGG | 0.437649 | 2.3:+29603000 | None:intergenic |
| GGGTATAATGTCTGAGACTT+TGG | 0.442292 | 2.3:+29602984 | None:intergenic |
| TCGTGAGGAATGGAAGGAAA+TGG | 0.443191 | 2.3:+29604837 | None:intergenic |
| GCGTTTGGTTGGCATGTGCC+CGG | 0.446971 | 2.3:-29603019 | MS.gene77650:CDS |
| TGGAAACCAGTATCAGTGTT+GGG | 0.452228 | 2.3:+29603189 | None:intergenic |
| TCCACAGTGGAATACATTAC+CGG | 0.452556 | 2.3:-29603069 | MS.gene77650:CDS |
| CACCGAGAAGTTCGTGTAAG+TGG | 0.461340 | 2.3:-29602946 | MS.gene77650:CDS |
| AGCCACTTACACGAACTTCT+CGG | 0.475846 | 2.3:+29602944 | None:intergenic |
| ACATCTCCTTTGTGGTGTGC+TGG | 0.485125 | 2.3:-29602433 | MS.gene77650:CDS |
| CATAAACGGTGTGTAGAAAT+GGG | 0.489419 | 2.3:-29602550 | MS.gene77650:CDS |
| GCCTAAATACAATTACTTTG+TGG | 0.489751 | 2.3:-29602656 | MS.gene77650:CDS |
| GAATGGAAGGAAATGGAAGT+GGG | 0.494037 | 2.3:+29604844 | None:intergenic |
| CTTCTATGCCAATACTTTGG+AGG | 0.495955 | 2.3:+29602839 | None:intergenic |
| TATTGAAAATCATCCGAAGC+TGG | 0.499544 | 2.3:-29603118 | MS.gene77650:CDS |
| ATTGAGTTTCGGCGTTTGGT+TGG | 0.499938 | 2.3:-29603030 | MS.gene77650:CDS |
| GGATTAAGCCTCGACATAAA+CGG | 0.510017 | 2.3:-29602564 | MS.gene77650:CDS |
| CACCTTCTTTGTCAGAGCTA+CGG | 0.513083 | 2.3:-29604812 | MS.gene77650:intron |
| CGGTGAAGGAACGTGAAGAC+GGG | 0.516327 | 2.3:+29602964 | None:intergenic |
| CTTTGGAGGAAGTACATAGT+AGG | 0.519338 | 2.3:+29602853 | None:intergenic |
| ATGTAATAAATCGTCGTCCT+CGG | 0.520791 | 2.3:-29602909 | MS.gene77650:CDS |
| AGTGACGCAGTAACCAGCTT+CGG | 0.520879 | 2.3:+29603105 | None:intergenic |
| GGAAATGGGGAGAGATTTGA+AGG | 0.522542 | 2.3:-29602632 | MS.gene77650:CDS |
| GTCTTTAATAATAAAGGAAG+AGG | 0.522895 | 2.3:+29602517 | None:intergenic |
| AGAAGGTGGGTCGTGAGGAA+TGG | 0.533372 | 2.3:+29604827 | None:intergenic |
| GGAATGGAAGGAAATGGAAG+TGG | 0.540119 | 2.3:+29604843 | None:intergenic |
| AGTGGGGACCCTAGAATGAA+AGG | 0.540231 | 2.3:+29604861 | None:intergenic |
| TTGGAAACCAGTATCAGTGT+TGG | 0.541510 | 2.3:+29603188 | None:intergenic |
| TAAATACAATTACTTTGTGG+TGG | 0.543115 | 2.3:-29602653 | MS.gene77650:CDS |
| GACACTACATGATAGCAAAT+GGG | 0.553619 | 2.3:+29602801 | None:intergenic |
| ATGTACTTCCTCCAAAGTAT+TGG | 0.554399 | 2.3:-29602847 | MS.gene77650:CDS |
| TCGGTGAAGGAACGTGAAGA+CGG | 0.554418 | 2.3:+29602963 | None:intergenic |
| AATTGCAGAGAAATCCATTC+CGG | 0.562172 | 2.3:+29603050 | None:intergenic |
| TTTGGGAATGTGGTGATCGG+TGG | 0.563121 | 2.3:+29604906 | None:intergenic |
| GGTGGGTCGTGAGGAATGGA+AGG | 0.564987 | 2.3:+29604831 | None:intergenic |
| GGGTTTGCAAAGACGAGTGA+AGG | 0.566400 | 2.3:+29604882 | None:intergenic |
| AAGCTAAATGAGAAATAATG+AGG | 0.567357 | 2.3:+29602595 | None:intergenic |
| GGATTTGGGAATGTGGTGAT+CGG | 0.571770 | 2.3:+29604903 | None:intergenic |
| TATAATGTCTGAGACTTTGG+TGG | 0.577681 | 2.3:+29602987 | None:intergenic |
| GTGGGGACCCTAGAATGAAA+GGG | 0.587170 | 2.3:+29604862 | None:intergenic |
| CTTTGGTGGTAAGAATCTCC+GGG | 0.592939 | 2.3:+29603001 | None:intergenic |
| GACAAAGAAGGTGGGTCGTG+AGG | 0.595553 | 2.3:+29604822 | None:intergenic |
| AACCGTAGCTCTGACAAAGA+AGG | 0.595582 | 2.3:+29604810 | None:intergenic |
| ATTACTTTGTGGTGGAAATG+GGG | 0.596286 | 2.3:-29602645 | MS.gene77650:CDS |
| GTGGTGATCGGTGGAAAACA+AGG | 0.598610 | 2.3:+29604915 | None:intergenic |
| TCTATACTTGATCAATATCA+CGG | 0.599535 | 2.3:+29602410 | None:intergenic |
| CCAAAGTATTGGCATAGAAG+AGG | 0.600971 | 2.3:-29602836 | MS.gene77650:CDS |
| TTACACGAACTTCTCGGTGA+AGG | 0.604014 | 2.3:+29602950 | None:intergenic |
| AGTGGAATACATTACCGGAA+TGG | 0.608509 | 2.3:-29603064 | MS.gene77650:CDS |
| CGTAGCTCTGACAAAGAAGG+TGG | 0.608988 | 2.3:+29604813 | None:intergenic |
| TCTACACACCGTTTATGTCG+AGG | 0.610087 | 2.3:+29602556 | None:intergenic |
| ATACTATAACAAAACAGCTG+AGG | 0.633616 | 2.3:+29602694 | None:intergenic |
| AATGGGGAGAGATTTGAAGG+AGG | 0.634987 | 2.3:-29602629 | MS.gene77650:CDS |
| GTCTTGTATCTAGAATCTAT+CGG | 0.638166 | 2.3:-29603159 | MS.gene77650:CDS |
| GAGTGAAGGATTTGGGAATG+TGG | 0.645827 | 2.3:+29604896 | None:intergenic |
| GAAACATCGATGTAGTGTCA+CGG | 0.680386 | 2.3:+29602725 | None:intergenic |
| TCACGGCCAGCACACCACAA+AGG | 0.684243 | 2.3:+29602427 | None:intergenic |
| TCCGGTAATGTATTCCACTG+TGG | 0.695997 | 2.3:+29603068 | None:intergenic |
| AATGGAAGGAAATGGAAGTG+GGG | 0.702093 | 2.3:+29604845 | None:intergenic |
| GTAGCTCTGACAAAGAAGGT+GGG | 0.703208 | 2.3:+29604814 | None:intergenic |
| ACATTGCAAATGATCAACCG+AGG | 0.728440 | 2.3:+29602892 | None:intergenic |
| AAACCAGTATCAGTGTTGGG+AGG | 0.731689 | 2.3:+29603192 | None:intergenic |
| TGGTGATCGGTGGAAAACAA+GGG | 0.748516 | 2.3:+29604916 | None:intergenic |
| TGACGATATAAAATCCACAG+TGG | 0.749902 | 2.3:-29603082 | MS.gene77650:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATTCAATTCAATTAATAAA+AGG | + | chr2.3:29603192-29603211 | None:intergenic | 10.0% |
| !! | TTATAGTATTAAGAATAATT+TGG | - | chr2.3:29604671-29604690 | MS.gene77650:intron | 10.0% |
| !!! | AATTTTGCTTATTTTTTAAA+CGG | + | chr2.3:29603593-29603612 | None:intergenic | 10.0% |
| !!! | ATAATTTAGTTTTTATTACT+GGG | - | chr2.3:29602758-29602777 | MS.gene77650:CDS | 10.0% |
| !! | AACTATTAAAATCAACTAAA+AGG | - | chr2.3:29603263-29603282 | MS.gene77650:intron | 15.0% |
| !! | AACTATTAAAATCAACTAAA+AGG | + | chr2.3:29603282-29603263 | None:intergenic | 15.0% |
| !!! | AAATTTTCATTTTTCTTACT+GGG | - | chr2.3:29602588-29602607 | MS.gene77650:CDS | 15.0% |
| !!! | AAGAATTTAGTTATGTTTTT+GGG | - | chr2.3:29602946-29602965 | MS.gene77650:CDS | 15.0% |
| !!! | AAGGTTTTTTCTTTTTATTT+TGG | - | chr2.3:29603020-29603039 | MS.gene77650:CDS | 15.0% |
| !!! | AAGTTTTCATTTTTATTACT+GGG | - | chr2.3:29602672-29602691 | MS.gene77650:CDS | 15.0% |
| !!! | ATTTTATTAATGGATGTAAA+TGG | - | chr2.3:29603436-29603455 | MS.gene77650:intron | 15.0% |
| !!! | ATTTTGCTTATTTTTTGAAA+TGG | - | chr2.3:29603672-29603691 | MS.gene77650:intron | 15.0% |
| !!! | GATAATTTAGTTTTTATTAC+TGG | - | chr2.3:29602757-29602776 | MS.gene77650:CDS | 15.0% |
| !!! | TAGTTGATTTTAATAGTTTA+GGG | - | chr2.3:29603346-29603365 | MS.gene77650:intron | 15.0% |
| !!! | TAGTTGATTTTAATAGTTTA+GGG | + | chr2.3:29603365-29603346 | None:intergenic | 15.0% |
| !!! | TTAGTTGATTTTAATAGTTT+AGG | - | chr2.3:29603345-29603364 | MS.gene77650:intron | 15.0% |
| !!! | TTAGTTGATTTTAATAGTTT+AGG | + | chr2.3:29603364-29603345 | None:intergenic | 15.0% |
| !!! | TTTTCTTTTTATTTTGGTTT+GGG | - | chr2.3:29603026-29603045 | MS.gene77650:CDS | 15.0% |
| !!! | TTTTTCTTTTTATTTTGGTT+TGG | - | chr2.3:29603025-29603044 | MS.gene77650:CDS | 15.0% |
| !! | TGAAAATTTGAAGATTATTG+AGG | + | chr2.3:29602577-29602596 | None:intergenic | 20.0% |
| !! | TTAATTTCATGCTTTAGTAA+AGG | - | chr2.3:29604016-29604035 | MS.gene77650:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | - | chr2.3:29603601-29603620 | MS.gene77650:intron | 20.0% |
| !!! | ATAAGCAAAATTCACTTTTT+AGG | + | chr2.3:29603620-29603601 | None:intergenic | 20.0% |
| !!! | ATCGAATACTTTGAAAATAT+CGG | - | chr2.3:29604594-29604613 | MS.gene77650:intron | 20.0% |
| !!! | CAAATTTTCATTTTTCTTAC+TGG | - | chr2.3:29602587-29602606 | MS.gene77650:CDS | 20.0% |
| !!! | CAAGAATTTAGTTATGTTTT+TGG | - | chr2.3:29602945-29602964 | MS.gene77650:CDS | 20.0% |
| !!! | CAAGTTTTCATTTTTATTAC+TGG | - | chr2.3:29602671-29602690 | MS.gene77650:CDS | 20.0% |
| !!! | TACTTTAGATTTTTCTTGAT+TGG | - | chr2.3:29602813-29602832 | MS.gene77650:CDS | 20.0% |
| !!! | TATTTTCAAAGTATTCGATT+CGG | + | chr2.3:29604593-29604612 | None:intergenic | 20.0% |
| !!! | TCACTAGTCTTTAATAATAA+AGG | + | chr2.3:29604843-29604862 | None:intergenic | 20.0% |
| !!! | TTTCTTTTTATTTTGGTTTG+GGG | - | chr2.3:29603027-29603046 | MS.gene77650:CDS | 20.0% |
| !!! | TTTGGTTAGGATTTTATTAA+TGG | - | chr2.3:29603426-29603445 | MS.gene77650:intron | 20.0% |
| ! | AAGCTAAATGAGAAATAATG+AGG | + | chr2.3:29604759-29604778 | None:intergenic | 25.0% |
| ! | ACATTATATTACAGTGTGTT+TGG | - | chr2.3:29603408-29603427 | MS.gene77650:intron | 25.0% |
| ! | ACCAAATTGACAAATAGTTT+AGG | - | chr2.3:29603369-29603388 | MS.gene77650:intron | 25.0% |
| ! | ACCACAAAGTAATTGTATTT+AGG | + | chr2.3:29604699-29604718 | None:intergenic | 25.0% |
| ! | ACTGCTTAAATCTTATTGAT+AGG | - | chr2.3:29603063-29603082 | MS.gene77650:CDS | 25.0% |
| ! | ATGTATTACAGGTTGTAAAA+TGG | - | chr2.3:29604115-29604134 | MS.gene77650:intron | 25.0% |
| ! | CAACAGAATTCAACAATAAA+CGG | + | chr2.3:29602977-29602996 | None:intergenic | 25.0% |
| ! | CAGTAAAGTTTATCATGTAA+CGG | + | chr2.3:29603947-29603966 | None:intergenic | 25.0% |
| ! | CCAAATTGACAAATAGTTTA+GGG | - | chr2.3:29603370-29603389 | MS.gene77650:intron | 25.0% |
| ! | CTGCTTAAATCTTATTGATA+GGG | - | chr2.3:29603064-29603083 | MS.gene77650:CDS | 25.0% |
| ! | GAAATTAATGTGCATTTAAC+AGG | + | chr2.3:29604004-29604023 | None:intergenic | 25.0% |
| ! | GCTTAATAATGCTAAAGTTT+AGG | - | chr2.3:29602616-29602635 | MS.gene77650:CDS | 25.0% |
| ! | GTCTTTAATAATAAAGGAAG+AGG | + | chr2.3:29604837-29604856 | None:intergenic | 25.0% |
| ! | TAAATACAATTACTTTGTGG+TGG | - | chr2.3:29604698-29604717 | MS.gene77650:intron | 25.0% |
| ! | TAATAGTTTAGGGACTAAAT+TGG | + | chr2.3:29603251-29603270 | None:intergenic | 25.0% |
| ! | TGCTTAAATCTTATTGATAG+GGG | - | chr2.3:29603065-29603084 | MS.gene77650:CDS | 25.0% |
| ! | TGTCAATAACATACTTTCTT+TGG | - | chr2.3:29603967-29603986 | MS.gene77650:intron | 25.0% |
| ! | TTAAGCACTTAAAAACCAAA+GGG | + | chr2.3:29603131-29603150 | None:intergenic | 25.0% |
| !!! | ATTTTCAAAGTATTCGATTC+GGG | + | chr2.3:29604592-29604611 | None:intergenic | 25.0% |
| !!! | CTATTATTCTAAGACATTGT+TGG | - | chr2.3:29602912-29602931 | MS.gene77650:CDS | 25.0% |
| !!! | TGCTTATTTTTTGAAATGGA+GGG | - | chr2.3:29603676-29603695 | MS.gene77650:intron | 25.0% |
| !!! | TTGCTTATTTTTTAAACGGA+GGG | + | chr2.3:29603589-29603608 | None:intergenic | 25.0% |
| !!! | TTGCTTATTTTTTGAAATGG+AGG | - | chr2.3:29603675-29603694 | MS.gene77650:intron | 25.0% |
| !!! | TTTGCTTATTTTTTAAACGG+AGG | + | chr2.3:29603590-29603609 | None:intergenic | 25.0% |
| AAAAACCTTAATCCTTCAAG+AGG | + | chr2.3:29603009-29603028 | None:intergenic | 30.0% | |
| AACATAATTAAGCATAGACC+GGG | + | chr2.3:29602651-29602670 | None:intergenic | 30.0% | |
| ACATAACTAAATTCTTGCCA+AGG | + | chr2.3:29602942-29602961 | None:intergenic | 30.0% | |
| ATACTATAACAAAACAGCTG+AGG | + | chr2.3:29604660-29604679 | None:intergenic | 30.0% | |
| ATATTACAGTGTGTTTGGTT+AGG | - | chr2.3:29603413-29603432 | MS.gene77650:intron | 30.0% | |
| ATTAATGTGCATTTAACAGG+AGG | + | chr2.3:29604001-29604020 | None:intergenic | 30.0% | |
| ATTTCTCTGCAATTGAGTTT+CGG | - | chr2.3:29604310-29604329 | MS.gene77650:intron | 30.0% | |
| CCCTAAACTATTTGTCAATT+TGG | + | chr2.3:29603373-29603392 | None:intergenic | 30.0% | |
| CTTAAGCACTTAAAAACCAA+AGG | + | chr2.3:29603132-29603151 | None:intergenic | 30.0% | |
| GAACATAATTAAGCATAGAC+CGG | + | chr2.3:29602652-29602671 | None:intergenic | 30.0% | |
| GCCTAAATACAATTACTTTG+TGG | - | chr2.3:29604695-29604714 | MS.gene77650:intron | 30.0% | |
| GGAGTAAAAAACTTGATCAA+TGG | - | chr2.3:29603773-29603792 | MS.gene77650:intron | 30.0% | |
| TAATGAATGATGCTCTAGTT+TGG | - | chr2.3:29602845-29602864 | MS.gene77650:CDS | 30.0% | |
| TATACTCTCATCCATCAATT+TGG | + | chr2.3:29603312-29603331 | None:intergenic | 30.0% | |
| TATTTGCTTGCATGTTGAAT+TGG | - | chr2.3:29604046-29604065 | MS.gene77650:intron | 30.0% | |
| TGAAGATTATTGAGGTTGAA+AGG | + | chr2.3:29602569-29602588 | None:intergenic | 30.0% | |
| ! | AATTACTTTGTGGTGGAAAT+GGG | - | chr2.3:29604705-29604724 | MS.gene77650:intron | 30.0% |
| ! | ATGGATGAGAGTATAGTTTA+AGG | - | chr2.3:29603317-29603336 | MS.gene77650:intron | 30.0% |
| ! | GTCTTGTATCTAGAATCTAT+CGG | - | chr2.3:29604192-29604211 | MS.gene77650:intron | 30.0% |
| ! | TCTCATTTAGCTTAGAGAAT+AGG | - | chr2.3:29604766-29604785 | MS.gene77650:intron | 30.0% |
| !! | AAGTTTAGGTTTTTCTTACC+CGG | - | chr2.3:29602630-29602649 | MS.gene77650:CDS | 30.0% |
| !! | TGATACTGGTTTCCAAAAAA+AGG | - | chr2.3:29604170-29604189 | MS.gene77650:intron | 30.0% |
| !! | TTTTCAAAGTATTCGATTCG+GGG | + | chr2.3:29604591-29604610 | None:intergenic | 30.0% |
| !!! | CTAGATACAAGACCTTTTTT+TGG | + | chr2.3:29604185-29604204 | None:intergenic | 30.0% |
| !!! | CTTTGGTTTTTAAGTGCTTA+AGG | - | chr2.3:29603130-29603149 | MS.gene77650:CDS | 30.0% |
| AACAATAGTTGAGCAAAAGG+AGG | + | chr2.3:29603466-29603485 | None:intergenic | 35.0% | |
| AATTGCAGAGAAATCCATTC+CGG | + | chr2.3:29604304-29604323 | None:intergenic | 35.0% | |
| ACATAAACGGTGTGTAGAAA+TGG | - | chr2.3:29604800-29604819 | MS.gene77650:intron | 35.0% | |
| ACTTGATCAATGGTTCACTT+AGG | - | chr2.3:29603783-29603802 | MS.gene77650:intron | 35.0% | |
| ATGTAATAAATCGTCGTCCT+CGG | - | chr2.3:29604442-29604461 | MS.gene77650:intron | 35.0% | |
| ATGTACTTCCTCCAAAGTAT+TGG | - | chr2.3:29604504-29604523 | MS.gene77650:intron | 35.0% | |
| ATTAGACCAAGAAGCTATAG+AGG | - | chr2.3:29603752-29603771 | MS.gene77650:intron | 35.0% | |
| CATAAACGGTGTGTAGAAAT+GGG | - | chr2.3:29604801-29604820 | MS.gene77650:intron | 35.0% | |
| GAAAGCAATATGCATATCAG+AGG | + | chr2.3:29603892-29603911 | None:intergenic | 35.0% | |
| GACACTACATGATAGCAAAT+GGG | + | chr2.3:29604553-29604572 | None:intergenic | 35.0% | |
| GTCCATAAACTATACTCTCA+GGG | - | chr2.3:29603285-29603304 | MS.gene77650:intron | 35.0% | |
| TATTGAAAATCATCCGAAGC+TGG | - | chr2.3:29604233-29604252 | MS.gene77650:intron | 35.0% | |
| TCCAACAATAGTTGAGCAAA+AGG | + | chr2.3:29603469-29603488 | None:intergenic | 35.0% | |
| TCTATAGCTTCTTGGTCTAA+TGG | + | chr2.3:29603753-29603772 | None:intergenic | 35.0% | |
| TGACAAATAGTTTAGGGACT+AGG | - | chr2.3:29603376-29603395 | MS.gene77650:intron | 35.0% | |
| TGACGATATAAAATCCACAG+TGG | - | chr2.3:29604269-29604288 | MS.gene77650:intron | 35.0% | |
| TTATTGATAGGGGAAATTGC+TGG | - | chr2.3:29603075-29603094 | MS.gene77650:CDS | 35.0% | |
| TTGCAAACCCTTTCATTCTA+GGG | - | chr2.3:29602482-29602501 | MS.gene77650:CDS | 35.0% | |
| TTGCTATCAGGATAGTTACA+CGG | - | chr2.3:29603157-29603176 | MS.gene77650:CDS | 35.0% | |
| TTTACTCCTCTATAGCTTCT+TGG | + | chr2.3:29603761-29603780 | None:intergenic | 35.0% | |
| TTTGCAAACCCTTTCATTCT+AGG | - | chr2.3:29602481-29602500 | MS.gene77650:CDS | 35.0% | |
| ! | ATTACTTTGTGGTGGAAATG+GGG | - | chr2.3:29604706-29604725 | MS.gene77650:intron | 35.0% |
| ! | CAATTACTTTGTGGTGGAAA+TGG | - | chr2.3:29604704-29604723 | MS.gene77650:intron | 35.0% |
| ! | CACAAAGGAGATGTTTTCAA+GGG | + | chr2.3:29604912-29604931 | None:intergenic | 35.0% |
| ! | GCTGGTACATGATTGTATTT+TGG | - | chr2.3:29603093-29603112 | MS.gene77650:CDS | 35.0% |
| ! | TATAATGTCTGAGACTTTGG+TGG | + | chr2.3:29604367-29604386 | None:intergenic | 35.0% |
| ! | TCCTTTTGCTCAACTATTGT+TGG | - | chr2.3:29603465-29603484 | MS.gene77650:intron | 35.0% |
| AATGGAAGGAAATGGAAGTG+GGG | + | chr2.3:29602509-29602528 | None:intergenic | 40.0% | |
| ACATTGCAAATGATCAACCG+AGG | + | chr2.3:29604462-29604481 | None:intergenic | 40.0% | |
| ACTCAGTAGTCAGTATAGGA+TGG | + | chr2.3:29603922-29603941 | None:intergenic | 40.0% | |
| AGTAGTCAGTATAGGATGGA+TGG | + | chr2.3:29603918-29603937 | None:intergenic | 40.0% | |
| AGTGGAATACATTACCGGAA+TGG | - | chr2.3:29604287-29604306 | MS.gene77650:intron | 40.0% | |
| CAAAGACGAGTGAAGGATTT+GGG | + | chr2.3:29602465-29602484 | None:intergenic | 40.0% | |
| CCTCTTCTATGCCAATACTT+TGG | + | chr2.3:29604518-29604537 | None:intergenic | 40.0% | |
| CCTTGAAAACATCTCCTTTG+TGG | - | chr2.3:29604910-29604929 | MS.gene77650:CDS | 40.0% | |
| CGACACTACATGATAGCAAA+TGG | + | chr2.3:29604554-29604573 | None:intergenic | 40.0% | |
| CTGTGCTTCTGATGTATTAC+AGG | - | chr2.3:29604104-29604123 | MS.gene77650:intron | 40.0% | |
| CTTCTATGCCAATACTTTGG+AGG | + | chr2.3:29604515-29604534 | None:intergenic | 40.0% | |
| CTTTGCCTCTTGAAGGATTA+AGG | - | chr2.3:29603001-29603020 | MS.gene77650:CDS | 40.0% | |
| GAAACATCGATGTAGTGTCA+CGG | + | chr2.3:29604629-29604648 | None:intergenic | 40.0% | |
| GAATGGAAGGAAATGGAAGT+GGG | + | chr2.3:29602510-29602529 | None:intergenic | 40.0% | |
| GCCACAGAGCATAAAACTAA+GGG | + | chr2.3:29603518-29603537 | None:intergenic | 40.0% | |
| GGATACTCAGTAGTCAGTAT+AGG | + | chr2.3:29603926-29603945 | None:intergenic | 40.0% | |
| GGATTAAGCCTCGACATAAA+CGG | - | chr2.3:29604787-29604806 | MS.gene77650:intron | 40.0% | |
| GGTCCATAAACTATACTCTC+AGG | - | chr2.3:29603284-29603303 | MS.gene77650:intron | 40.0% | |
| GTAGTCAGTATAGGATGGAT+GGG | + | chr2.3:29603917-29603936 | None:intergenic | 40.0% | |
| TCCACAGTGGAATACATTAC+CGG | - | chr2.3:29604282-29604301 | MS.gene77650:intron | 40.0% | |
| TGGAAACCAGTATCAGTGTT+GGG | + | chr2.3:29604165-29604184 | None:intergenic | 40.0% | |
| TGGATAAAGTTGCTACCCTT+TGG | - | chr2.3:29603113-29603132 | MS.gene77650:CDS | 40.0% | |
| TGGTGAGAGAGTGATAGTTT+AGG | + | chr2.3:29603231-29603250 | None:intergenic | 40.0% | |
| TTGGAAACCAGTATCAGTGT+TGG | + | chr2.3:29604166-29604185 | None:intergenic | 40.0% | |
| TTGGGAGGTAGAGTTTGATT+TGG | + | chr2.3:29604147-29604166 | None:intergenic | 40.0% | |
| TTGTGTTCTTTGCCTCTTGA+AGG | - | chr2.3:29602994-29603013 | MS.gene77650:CDS | 40.0% | |
| ! | AAGACATTGTTGGTTGTCCT+TGG | - | chr2.3:29602922-29602941 | MS.gene77650:CDS | 40.0% |
| ! | ACTTTGGTGGTAAGAATCTC+CGG | + | chr2.3:29604354-29604373 | None:intergenic | 40.0% |
| ! | ATGCTCTAGTTTGGCTGTTT+GGG | - | chr2.3:29602854-29602873 | MS.gene77650:CDS | 40.0% |
| ! | CCACAAAGGAGATGTTTTCA+AGG | + | chr2.3:29604913-29604932 | None:intergenic | 40.0% |
| ! | CTGTAATACATCAGAAGCAC+AGG | + | chr2.3:29604106-29604125 | None:intergenic | 40.0% |
| ! | CTTTGGAGGAAGTACATAGT+AGG | + | chr2.3:29604501-29604520 | None:intergenic | 40.0% |
| ! | GCTTAAGGATTCTTGCTATC+AGG | - | chr2.3:29603145-29603164 | MS.gene77650:CDS | 40.0% |
| ! | GGGTATAATGTCTGAGACTT+TGG | + | chr2.3:29604370-29604389 | None:intergenic | 40.0% |
| ! | GTCCCTGAGAGTATAGTTTA+TGG | + | chr2.3:29603290-29603309 | None:intergenic | 40.0% |
| !! | CCAAAGTATTGGCATAGAAG+AGG | - | chr2.3:29604515-29604534 | MS.gene77650:intron | 40.0% |
| AATGGGGAGAGATTTGAAGG+AGG | - | chr2.3:29604722-29604741 | MS.gene77650:intron | 45.0% | |
| ACCAGAGAACTGATATCACG+AGG | + | chr2.3:29603865-29603884 | None:intergenic | 45.0% | |
| ACTCTCAGGGACCAAATTGA+TGG | - | chr2.3:29603298-29603317 | MS.gene77650:intron | 45.0% | |
| AGCCACTTACACGAACTTCT+CGG | + | chr2.3:29604410-29604429 | None:intergenic | 45.0% | |
| ATCCCCCGTCGAAAGAATAA+GGG | + | chr2.3:29603548-29603567 | None:intergenic | 45.0% | |
| ATTGAGTTTCGGCGTTTGGT+TGG | - | chr2.3:29604321-29604340 | MS.gene77650:intron | 45.0% | |
| CACCTTCTTTGTCAGAGCTA+CGG | - | chr2.3:29602539-29602558 | MS.gene77650:CDS | 45.0% | |
| CGCCACAGAGCATAAAACTA+AGG | + | chr2.3:29603519-29603538 | None:intergenic | 45.0% | |
| GAGTGAAGGATTTGGGAATG+TGG | + | chr2.3:29602458-29602477 | None:intergenic | 45.0% | |
| GCAAAGACGAGTGAAGGATT+TGG | + | chr2.3:29602466-29602485 | None:intergenic | 45.0% | |
| GGAAATGGGGAGAGATTTGA+AGG | - | chr2.3:29604719-29604738 | MS.gene77650:intron | 45.0% | |
| GGAATGGAAGGAAATGGAAG+TGG | + | chr2.3:29602511-29602530 | None:intergenic | 45.0% | |
| GGATTTGGGAATGTGGTGAT+CGG | + | chr2.3:29602451-29602470 | None:intergenic | 45.0% | |
| TCCGGTAATGTATTCCACTG+TGG | + | chr2.3:29604286-29604305 | None:intergenic | 45.0% | |
| TCCTCGTGATATCAGTTCTC+TGG | - | chr2.3:29603861-29603880 | MS.gene77650:intron | 45.0% | |
| TCGTGAGGAATGGAAGGAAA+TGG | + | chr2.3:29602517-29602536 | None:intergenic | 45.0% | |
| TCTACACACCGTTTATGTCG+AGG | + | chr2.3:29604798-29604817 | None:intergenic | 45.0% | |
| TGCAATTGAGTTTCGGCGTT+TGG | - | chr2.3:29604317-29604336 | MS.gene77650:intron | 45.0% | |
| TGCGACCCTTATTCTTTCGA+CGG | - | chr2.3:29603540-29603559 | MS.gene77650:intron | 45.0% | |
| TGGTGATCGGTGGAAAACAA+GGG | + | chr2.3:29602438-29602457 | None:intergenic | 45.0% | |
| TTACACGAACTTCTCGGTGA+AGG | + | chr2.3:29604404-29604423 | None:intergenic | 45.0% | |
| ! | AAACCAGTATCAGTGTTGGG+AGG | + | chr2.3:29604162-29604181 | None:intergenic | 45.0% |
| ! | CTTTGGTGGTAAGAATCTCC+GGG | + | chr2.3:29604353-29604372 | None:intergenic | 45.0% |
| ! | GATGCTCTAGTTTGGCTGTT+TGG | - | chr2.3:29602853-29602872 | MS.gene77650:CDS | 45.0% |
| !! | AACCGTAGCTCTGACAAAGA+AGG | + | chr2.3:29602544-29602563 | None:intergenic | 45.0% |
| !! | GTAGCTCTGACAAAGAAGGT+GGG | + | chr2.3:29602540-29602559 | None:intergenic | 45.0% |
| !!! | GCCCTTAGTTTTATGCTCTG+TGG | - | chr2.3:29603514-29603533 | MS.gene77650:intron | 45.0% |
| ACATCTCCTTTGTGGTGTGC+TGG | - | chr2.3:29604918-29604937 | MS.gene77650:CDS | 50.0% | |
| AGTGACGCAGTAACCAGCTT+CGG | + | chr2.3:29604249-29604268 | None:intergenic | 50.0% | |
| AGTGGGGACCCTAGAATGAA+AGG | + | chr2.3:29602493-29602512 | None:intergenic | 50.0% | |
| CACCGAGAAGTTCGTGTAAG+TGG | - | chr2.3:29604405-29604424 | MS.gene77650:intron | 50.0% | |
| CATCCCCCGTCGAAAGAATA+AGG | + | chr2.3:29603549-29603568 | None:intergenic | 50.0% | |
| CGACCCTTATTCTTTCGACG+GGG | - | chr2.3:29603542-29603561 | MS.gene77650:intron | 50.0% | |
| CTACCTCCCAACACTGATAC+TGG | - | chr2.3:29604156-29604175 | MS.gene77650:intron | 50.0% | |
| GACCCTTATTCTTTCGACGG+GGG | - | chr2.3:29603543-29603562 | MS.gene77650:intron | 50.0% | |
| GCGACCCTTATTCTTTCGAC+GGG | - | chr2.3:29603541-29603560 | MS.gene77650:intron | 50.0% | |
| GGGTTTGCAAAGACGAGTGA+AGG | + | chr2.3:29602472-29602491 | None:intergenic | 50.0% | |
| GTGGGGACCCTAGAATGAAA+GGG | + | chr2.3:29602492-29602511 | None:intergenic | 50.0% | |
| GTGGTGATCGGTGGAAAACA+AGG | + | chr2.3:29602439-29602458 | None:intergenic | 50.0% | |
| TCGGTGAAGGAACGTGAAGA+CGG | + | chr2.3:29604391-29604410 | None:intergenic | 50.0% | |
| TTTGGGAATGTGGTGATCGG+TGG | + | chr2.3:29602448-29602467 | None:intergenic | 50.0% | |
| !! | CGTAGCTCTGACAAAGAAGG+TGG | + | chr2.3:29602541-29602560 | None:intergenic | 50.0% |
| AGAAGGTGGGTCGTGAGGAA+TGG | + | chr2.3:29602527-29602546 | None:intergenic | 55.0% | |
| CGGTGAAGGAACGTGAAGAC+GGG | + | chr2.3:29604390-29604409 | None:intergenic | 55.0% | |
| GACAAAGAAGGTGGGTCGTG+AGG | + | chr2.3:29602532-29602551 | None:intergenic | 55.0% | |
| GCGTTTGGTTGGCATGTGCC+CGG | - | chr2.3:29604332-29604351 | MS.gene77650:intron | 60.0% | |
| GGTGGGTCGTGAGGAATGGA+AGG | + | chr2.3:29602523-29602542 | None:intergenic | 60.0% | |
| TCACGGCCAGCACACCACAA+AGG | + | chr2.3:29604927-29604946 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 29602411 | 29604962 | 29602411 | ID=MS.gene77650 |
| chr2.3 | mRNA | 29602411 | 29604962 | 29602411 | ID=MS.gene77650.t1;Parent=MS.gene77650 |
| chr2.3 | exon | 29604813 | 29604962 | 29604813 | ID=MS.gene77650.t1.exon1;Parent=MS.gene77650.t1 |
| chr2.3 | CDS | 29604813 | 29604962 | 29604813 | ID=cds.MS.gene77650.t1;Parent=MS.gene77650.t1 |
| chr2.3 | exon | 29602411 | 29603247 | 29602411 | ID=MS.gene77650.t1.exon2;Parent=MS.gene77650.t1 |
| chr2.3 | CDS | 29602411 | 29603247 | 29602411 | ID=cds.MS.gene77650.t1;Parent=MS.gene77650.t1 |
| Gene Sequence |
| Protein sequence |
