Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91155.t1 | XP_013466929.1 | 83.5 | 170 | 21 | 2 | 1 | 170 | 1 | 163 | 7.70E-66 | 260 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91155.t1 | Q9LF68 | 75.3 | 93 | 23 | 0 | 73 | 165 | 84 | 176 | 5.6e-33 | 142.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91155.t1 | I3SAF3 | 83.5 | 170 | 21 | 2 | 1 | 170 | 1 | 163 | 5.6e-66 | 260.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene91155 | 0.862621 | 4.45E-64 | -1.69E-46 |
| MS.gene049173 | MS.gene91155 | 0.816665 | 4.92E-52 | -1.69E-46 |
| MS.gene049217 | MS.gene91155 | 0.858548 | 7.64E-63 | -1.69E-46 |
| MS.gene049222 | MS.gene91155 | 0.854 | 1.65E-61 | -1.69E-46 |
| MS.gene049232 | MS.gene91155 | 0.827221 | 1.76E-54 | -1.69E-46 |
| MS.gene049285 | MS.gene91155 | 0.884068 | 2.63E-71 | -1.69E-46 |
| MS.gene049320 | MS.gene91155 | 0.869835 | 2.30E-66 | -1.69E-46 |
| MS.gene049609 | MS.gene91155 | 0.800665 | 1.30E-48 | -1.69E-46 |
| MS.gene049627 | MS.gene91155 | 0.847826 | 9.04E-60 | -1.69E-46 |
| MS.gene049633 | MS.gene91155 | 0.812881 | 3.39E-51 | -1.69E-46 |
| MS.gene05010 | MS.gene91155 | 0.866405 | 2.92E-65 | -1.69E-46 |
| MS.gene050163 | MS.gene91155 | 0.874655 | 5.70E-68 | -1.69E-46 |
| MS.gene050165 | MS.gene91155 | 0.883417 | 4.57E-71 | -1.69E-46 |
| MS.gene050170 | MS.gene91155 | 0.812864 | 3.42E-51 | -1.69E-46 |
| MS.gene050323 | MS.gene91155 | 0.824819 | 6.57E-54 | -1.69E-46 |
| MS.gene050333 | MS.gene91155 | 0.846674 | 1.87E-59 | -1.69E-46 |
| MS.gene050444 | MS.gene91155 | 0.859089 | 5.26E-63 | -1.69E-46 |
| MS.gene050496 | MS.gene91155 | 0.801375 | 9.27E-49 | -1.69E-46 |
| MS.gene050504 | MS.gene91155 | 0.881229 | 2.85E-70 | -1.69E-46 |
| MS.gene050518 | MS.gene91155 | 0.884376 | 2.02E-71 | -1.69E-46 |
| MS.gene050577 | MS.gene91155 | 0.810081 | 1.38E-50 | -1.69E-46 |
| MS.gene050612 | MS.gene91155 | 0.866663 | 2.42E-65 | -1.69E-46 |
| MS.gene050675 | MS.gene91155 | 0.841866 | 3.66E-58 | -1.69E-46 |
| MS.gene050699 | MS.gene91155 | 0.848798 | 4.87E-60 | -1.69E-46 |
| MS.gene050772 | MS.gene91155 | 0.83223 | 1.06E-55 | -1.69E-46 |
| MS.gene050868 | MS.gene91155 | 0.842767 | 2.11E-58 | -1.69E-46 |
| MS.gene050871 | MS.gene91155 | 0.843001 | 1.83E-58 | -1.69E-46 |
| MS.gene050876 | MS.gene91155 | 0.881291 | 2.71E-70 | -1.69E-46 |
| MS.gene05087 | MS.gene91155 | 0.840312 | 9.38E-58 | -1.69E-46 |
| MS.gene050904 | MS.gene91155 | 0.852986 | 3.22E-61 | -1.69E-46 |
| MS.gene050986 | MS.gene91155 | 0.860209 | 2.42E-63 | -1.69E-46 |
| MS.gene05100 | MS.gene91155 | 0.812288 | 4.57E-51 | -1.69E-46 |
| MS.gene051268 | MS.gene91155 | 0.818978 | 1.48E-52 | -1.69E-46 |
| MS.gene051317 | MS.gene91155 | 0.867204 | 1.63E-65 | -1.69E-46 |
| MS.gene051551 | MS.gene91155 | 0.852384 | 4.78E-61 | -1.69E-46 |
| MS.gene051810 | MS.gene91155 | 0.840665 | 7.58E-58 | -1.69E-46 |
| MS.gene051858 | MS.gene91155 | 0.833005 | 6.84E-56 | -1.69E-46 |
| MS.gene051949 | MS.gene91155 | 0.838495 | 2.78E-57 | -1.69E-46 |
| MS.gene052379 | MS.gene91155 | 0.820859 | 5.49E-53 | -1.69E-46 |
| MS.gene052482 | MS.gene91155 | 0.806241 | 9.05E-50 | -1.69E-46 |
| MS.gene052486 | MS.gene91155 | 0.817093 | 3.94E-52 | -1.69E-46 |
| MS.gene052605 | MS.gene91155 | 0.816766 | 4.67E-52 | -1.69E-46 |
| MS.gene052822 | MS.gene91155 | 0.819741 | 9.91E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene91155 | 0.829198 | 5.89E-55 | -1.69E-46 |
| MS.gene052872 | MS.gene91155 | 0.836477 | 9.15E-57 | -1.69E-46 |
| MS.gene052966 | MS.gene91155 | 0.833336 | 5.65E-56 | -1.69E-46 |
| MS.gene053203 | MS.gene91155 | 0.827631 | 1.41E-54 | -1.69E-46 |
| MS.gene053207 | MS.gene91155 | 0.817622 | 3.00E-52 | -1.69E-46 |
| MS.gene053213 | MS.gene91155 | 0.833403 | 5.44E-56 | -1.69E-46 |
| MS.gene053284 | MS.gene91155 | 0.828492 | 8.72E-55 | -1.69E-46 |
| MS.gene053285 | MS.gene91155 | 0.819374 | 1.20E-52 | -1.69E-46 |
| MS.gene053286 | MS.gene91155 | 0.831034 | 2.10E-55 | -1.69E-46 |
| MS.gene053479 | MS.gene91155 | 0.818805 | 1.62E-52 | -1.69E-46 |
| MS.gene053480 | MS.gene91155 | 0.802149 | 6.43E-49 | -1.69E-46 |
| MS.gene053632 | MS.gene91155 | 0.816479 | 5.41E-52 | -1.69E-46 |
| MS.gene053824 | MS.gene91155 | 0.825586 | 4.32E-54 | -1.69E-46 |
| MS.gene053916 | MS.gene91155 | 0.801639 | 8.19E-49 | -1.69E-46 |
| MS.gene054595 | MS.gene91155 | 0.813669 | 2.28E-51 | -1.69E-46 |
| MS.gene054600 | MS.gene91155 | 0.85204 | 5.99E-61 | -1.69E-46 |
| MS.gene054642 | MS.gene91155 | 0.859404 | 4.23E-63 | -1.69E-46 |
| MS.gene05470 | MS.gene91155 | 0.830403 | 3.00E-55 | -1.69E-46 |
| MS.gene054954 | MS.gene91155 | 0.875794 | 2.33E-68 | -1.69E-46 |
| MS.gene055206 | MS.gene91155 | 0.816531 | 5.27E-52 | -1.69E-46 |
| MS.gene055362 | MS.gene91155 | 0.867247 | 1.58E-65 | -1.69E-46 |
| MS.gene055502 | MS.gene91155 | 0.848125 | 7.48E-60 | -1.69E-46 |
| MS.gene055577 | MS.gene91155 | 0.871614 | 5.97E-67 | -1.69E-46 |
| MS.gene055634 | MS.gene91155 | 0.818216 | 2.20E-52 | -1.69E-46 |
| MS.gene055636 | MS.gene91155 | 0.821025 | 5.03E-53 | -1.69E-46 |
| MS.gene055638 | MS.gene91155 | 0.824879 | 6.35E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene91155 | 0.800942 | 1.14E-48 | -1.69E-46 |
| MS.gene055748 | MS.gene91155 | 0.827211 | 1.77E-54 | -1.69E-46 |
| MS.gene055750 | MS.gene91155 | 0.801445 | 8.97E-49 | -1.69E-46 |
| MS.gene055751 | MS.gene91155 | 0.838101 | 3.51E-57 | -1.69E-46 |
| MS.gene055776 | MS.gene91155 | 0.841449 | 4.72E-58 | -1.69E-46 |
| MS.gene055849 | MS.gene91155 | 0.821948 | 3.08E-53 | -1.69E-46 |
| MS.gene05589 | MS.gene91155 | 0.813072 | 3.08E-51 | -1.69E-46 |
| MS.gene055941 | MS.gene91155 | 0.840986 | 6.25E-58 | -1.69E-46 |
| MS.gene056374 | MS.gene91155 | 0.833159 | 6.26E-56 | -1.69E-46 |
| MS.gene056409 | MS.gene91155 | 0.80335 | 3.64E-49 | -1.69E-46 |
| MS.gene056504 | MS.gene91155 | 0.849209 | 3.75E-60 | -1.69E-46 |
| MS.gene056510 | MS.gene91155 | 0.846515 | 2.07E-59 | -1.69E-46 |
| MS.gene056549 | MS.gene91155 | 0.813022 | 3.16E-51 | -1.69E-46 |
| MS.gene056610 | MS.gene91155 | 0.805146 | 1.54E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene91155 | 0.857142 | 2.00E-62 | -1.69E-46 |
| MS.gene056692 | MS.gene91155 | 0.842944 | 1.90E-58 | -1.69E-46 |
| MS.gene056898 | MS.gene91155 | 0.88247 | 1.01E-70 | -1.69E-46 |
| MS.gene057129 | MS.gene91155 | 0.800028 | 1.75E-48 | -1.69E-46 |
| MS.gene057331 | MS.gene91155 | 0.800714 | 1.27E-48 | -1.69E-46 |
| MS.gene057416 | MS.gene91155 | 0.823202 | 1.57E-53 | -1.69E-46 |
| MS.gene057658 | MS.gene91155 | 0.816243 | 6.12E-52 | -1.69E-46 |
| MS.gene057831 | MS.gene91155 | 0.839224 | 1.80E-57 | -1.69E-46 |
| MS.gene057857 | MS.gene91155 | 0.81417 | 1.77E-51 | -1.69E-46 |
| MS.gene057926 | MS.gene91155 | 0.828361 | 9.38E-55 | -1.69E-46 |
| MS.gene057986 | MS.gene91155 | 0.82166 | 3.59E-53 | -1.69E-46 |
| MS.gene058334 | MS.gene91155 | -0.803627 | 3.19E-49 | -1.69E-46 |
| MS.gene058335 | MS.gene91155 | 0.821614 | 3.68E-53 | -1.69E-46 |
| MS.gene058338 | MS.gene91155 | 0.803929 | 2.76E-49 | -1.69E-46 |
| MS.gene05837 | MS.gene91155 | 0.807888 | 4.06E-50 | -1.69E-46 |
| MS.gene058419 | MS.gene91155 | 0.863477 | 2.42E-64 | -1.69E-46 |
| MS.gene058544 | MS.gene91155 | 0.818678 | 1.73E-52 | -1.69E-46 |
| MS.gene058723 | MS.gene91155 | 0.812595 | 3.92E-51 | -1.69E-46 |
| MS.gene058773 | MS.gene91155 | 0.896182 | 4.72E-76 | -1.69E-46 |
| MS.gene058838 | MS.gene91155 | 0.811326 | 7.40E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene91155 | 0.879709 | 9.98E-70 | -1.69E-46 |
| MS.gene059023 | MS.gene91155 | 0.862843 | 3.80E-64 | -1.69E-46 |
| MS.gene059029 | MS.gene91155 | 0.813583 | 2.38E-51 | -1.69E-46 |
| MS.gene059079 | MS.gene91155 | 0.80234 | 5.88E-49 | -1.69E-46 |
| MS.gene05912 | MS.gene91155 | 0.842768 | 2.11E-58 | -1.69E-46 |
| MS.gene05934 | MS.gene91155 | 0.814297 | 1.65E-51 | -1.69E-46 |
| MS.gene059677 | MS.gene91155 | 0.891685 | 3.17E-74 | -1.69E-46 |
| MS.gene059718 | MS.gene91155 | 0.841772 | 3.88E-58 | -1.69E-46 |
| MS.gene059756 | MS.gene91155 | 0.821021 | 5.04E-53 | -1.69E-46 |
| MS.gene059801 | MS.gene91155 | 0.813153 | 2.96E-51 | -1.69E-46 |
| MS.gene059865 | MS.gene91155 | 0.843396 | 1.44E-58 | -1.69E-46 |
| MS.gene059902 | MS.gene91155 | 0.824189 | 9.24E-54 | -1.69E-46 |
| MS.gene06000 | MS.gene91155 | 0.806152 | 9.45E-50 | -1.69E-46 |
| MS.gene060337 | MS.gene91155 | -0.804055 | 2.60E-49 | -1.69E-46 |
| MS.gene060602 | MS.gene91155 | -0.811673 | 6.22E-51 | -1.69E-46 |
| MS.gene060703 | MS.gene91155 | 0.883625 | 3.83E-71 | -1.69E-46 |
| MS.gene060762 | MS.gene91155 | 0.865792 | 4.57E-65 | -1.69E-46 |
| MS.gene06077 | MS.gene91155 | 0.846825 | 1.70E-59 | -1.69E-46 |
| MS.gene06092 | MS.gene91155 | 0.821488 | 3.93E-53 | -1.69E-46 |
| MS.gene060982 | MS.gene91155 | 0.832239 | 1.06E-55 | -1.69E-46 |
| MS.gene061134 | MS.gene91155 | 0.801777 | 7.67E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene91155 | 0.849725 | 2.69E-60 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91155.t1 | MTR_1g040145 | 82.759 | 174 | 15 | 3 | 1 | 170 | 1 | 163 | 1.92e-98 | 281 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91155.t1 | AT5G17560 | 75.269 | 93 | 23 | 0 | 73 | 165 | 84 | 176 | 1.62e-48 | 155 |
| MS.gene91155.t1 | AT5G17560 | 61.224 | 49 | 19 | 0 | 73 | 121 | 84 | 132 | 1.08e-15 | 70.1 |
| MS.gene91155.t1 | AT5G17560 | 63.830 | 47 | 17 | 0 | 73 | 119 | 84 | 130 | 1.23e-15 | 69.7 |
Find 36 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGCAAAGCTCTTCCCGTTT+TGG | 0.252036 | 1.3:+22799785 | MS.gene91155:CDS |
| AATAATTTCTCATCATGTTT+AGG | 0.269314 | 1.3:-22799906 | None:intergenic |
| GGCTGCTTCAGCAGGAGTTT+TGG | 0.331235 | 1.3:-22804411 | None:intergenic |
| TTCCCGGCGGCTGCTTCAGC+AGG | 0.381862 | 1.3:-22804419 | None:intergenic |
| CCGTAAGGTCGAACCAAAAC+GGG | 0.405363 | 1.3:-22799798 | None:intergenic |
| GACCATCCTTTGCCTATTCA+CGG | 0.418047 | 1.3:-22804330 | None:intergenic |
| AGGGACAATCAGCCGTGAAT+AGG | 0.422097 | 1.3:+22804318 | MS.gene91155:CDS |
| ATGGTGACGGACGCCATGTT+AGG | 0.435349 | 1.3:+22801883 | MS.gene91155:CDS |
| GTCTCTGTAAAGGATGCTTA+TGG | 0.438536 | 1.3:+22801864 | MS.gene91155:CDS |
| GGATGGTCTATAAAGCCATA+TGG | 0.439769 | 1.3:+22804345 | MS.gene91155:CDS |
| ACCGTAAGGTCGAACCAAAA+CGG | 0.443202 | 1.3:-22799799 | None:intergenic |
| GAGAGAAGTAGTTTGTGAAG+TGG | 0.462902 | 1.3:-22799871 | None:intergenic |
| ACTCTGAAGCTCCTCCCATA+TGG | 0.480068 | 1.3:-22804360 | None:intergenic |
| CATTCAATCTATGCAGCAAA+AGG | 0.489634 | 1.3:+22800010 | MS.gene91155:CDS |
| ACTCCTGCTGAAGCAGCCGC+CGG | 0.495922 | 1.3:+22804416 | MS.gene91155:CDS |
| CTCCTGCTGAAGCAGCCGCC+GGG | 0.517457 | 1.3:+22804417 | MS.gene91155:CDS |
| TGCTGCATAGATTGAATGAG+AGG | 0.526410 | 1.3:-22800005 | None:intergenic |
| TGCAGAAACAGTCTCTGTAA+AGG | 0.528582 | 1.3:+22801854 | MS.gene91155:CDS |
| CCAAAACGGGAAGAGCTTTG+CGG | 0.536712 | 1.3:-22799785 | None:intergenic |
| GATGGTCTATAAAGCCATAT+GGG | 0.540058 | 1.3:+22804346 | MS.gene91155:CDS |
| GTGGATTTGTTGTTACCGTA+AGG | 0.541695 | 1.3:-22799813 | None:intergenic |
| GCTACTAATGTAAACGATGC+TGG | 0.547238 | 1.3:+22799969 | MS.gene91155:CDS |
| TGTTGTATCGACAGCCTTCG+AGG | 0.555514 | 1.3:+22804298 | MS.gene91155:CDS |
| AAGAGCTTTGCGGAGTAAAG+TGG | 0.561290 | 1.3:-22799775 | None:intergenic |
| GTAAAGGATGCTTATGGTGA+CGG | 0.570886 | 1.3:+22801870 | MS.gene91155:CDS |
| CACGGCTGATTGTCCCTCGA+AGG | 0.576768 | 1.3:-22804312 | None:intergenic |
| AGCTTTGCGGAGTAAAGTGG+TGG | 0.589293 | 1.3:-22799772 | None:intergenic |
| AGCCGTGAATAGGCAAAGGA+TGG | 0.626414 | 1.3:+22804328 | MS.gene91155:CDS |
| TAGTTTGTGAAGTGGATCTG+AGG | 0.629676 | 1.3:-22799863 | None:intergenic |
| AATCAGCCGTGAATAGGCAA+AGG | 0.635801 | 1.3:+22804324 | MS.gene91155:CDS |
| GTTGTATCGACAGCCTTCGA+GGG | 0.642242 | 1.3:+22804299 | MS.gene91155:CDS |
| TTACGGTAACAACAAATCCA+CGG | 0.683361 | 1.3:+22799815 | MS.gene91155:CDS |
| GCTTTGCGGAGTAAAGTGGT+GGG | 0.693255 | 1.3:-22799771 | None:intergenic |
| GGTCTATAAAGCCATATGGG+AGG | 0.704868 | 1.3:+22804349 | MS.gene91155:CDS |
| CTTGCGAATAGAATTAACAG+TGG | 0.711646 | 1.3:-22799934 | None:intergenic |
| ATGATTACGAAAGAGAACCG+TGG | 0.718260 | 1.3:-22799832 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACTATTCATATTGTTAATAA+AGG | - | chr1.3:22800123-22800142 | None:intergenic | 15.0% |
| !! | AGTATCTAAATTTAGATATA+GGG | + | chr1.3:22801452-22801471 | MS.gene91155:intron | 15.0% |
| !! | ATGAAATTCTGAATTTATTT+AGG | - | chr1.3:22801499-22801518 | None:intergenic | 15.0% |
| !! | TAAATTTCATAAACTTAGAT+AGG | + | chr1.3:22801429-22801448 | MS.gene91155:intron | 15.0% |
| !! | TAAATTTCATAATTGATTGA+TGG | + | chr1.3:22801639-22801658 | MS.gene91155:intron | 15.0% |
| !! | TAGATATTTCAAATTTACTA+AGG | - | chr1.3:22802119-22802138 | None:intergenic | 15.0% |
| !! | TATCTAAGTTTATGAAATTT+AGG | - | chr1.3:22801430-22801449 | None:intergenic | 15.0% |
| !!! | AAAATATATCACTTAGTTTT+TGG | - | chr1.3:22802886-22802905 | None:intergenic | 15.0% |
| !!! | AAATATATCACTTAGTTTTT+GGG | - | chr1.3:22802885-22802904 | None:intergenic | 15.0% |
| !!! | AAGATATTTTAAATTTGAAG+AGG | - | chr1.3:22801042-22801061 | None:intergenic | 15.0% |
| !!! | AATTTCATAATTCTAAGATA+TGG | + | chr1.3:22801511-22801530 | MS.gene91155:intron | 15.0% |
| !!! | ATAATATGATAATGATTCAA+TGG | + | chr1.3:22802204-22802223 | MS.gene91155:intron | 15.0% |
| !!! | ATATCTTTATTTTTCTATCT+AGG | + | chr1.3:22801300-22801319 | MS.gene91155:intron | 15.0% |
| !!! | ATTTCATAATTCTAAGATAT+AGG | + | chr1.3:22801512-22801531 | MS.gene91155:intron | 15.0% |
| !!! | ATTTCATAATTCTAAGATAT+GGG | + | chr1.3:22801512-22801531 | MS.gene91155:intron | 15.0% |
| !!! | ATTTTGCTAGAAATTTATTT+AGG | + | chr1.3:22801271-22801290 | MS.gene91155:intron | 15.0% |
| !!! | TATGTATTGATCTAATAATA+GGG | + | chr1.3:22803501-22803520 | MS.gene91155:intron | 15.0% |
| !!! | TTAATTGTTATCTCTTTTTT+GGG | + | chr1.3:22801762-22801781 | MS.gene91155:intron | 15.0% |
| !!! | TTTTTCTAATTTCTATAACA+CGG | + | chr1.3:22802320-22802339 | MS.gene91155:intron | 15.0% |
| !! | AATAATTTCTCATCATGTTT+AGG | - | chr1.3:22799909-22799928 | None:intergenic | 20.0% |
| !! | AATTAATTTAATAGTCAAGC+TGG | + | chr1.3:22802848-22802867 | MS.gene91155:intron | 20.0% |
| !! | AGATAGAAAAGTAAAGATAT+AGG | + | chr1.3:22801372-22801391 | MS.gene91155:intron | 20.0% |
| !! | ATATGGATTCTAATCAATTT+AGG | + | chr1.3:22800641-22800660 | MS.gene91155:intron | 20.0% |
| !! | GAGTATCTAAATTTAGATAT+AGG | + | chr1.3:22801451-22801470 | MS.gene91155:intron | 20.0% |
| !! | GTTGTATAACAATATAGATT+GGG | - | chr1.3:22800845-22800864 | None:intergenic | 20.0% |
| !! | TATGGATTCTAATCAATTTA+GGG | + | chr1.3:22800642-22800661 | MS.gene91155:intron | 20.0% |
| !! | TGTTGTATAACAATATAGAT+TGG | - | chr1.3:22800846-22800865 | None:intergenic | 20.0% |
| !! | TTAACTATTGAAGTGAATTT+CGG | + | chr1.3:22801917-22801936 | MS.gene91155:intron | 20.0% |
| !! | TTAGTTTATTGAACAATACT+AGG | - | chr1.3:22802548-22802567 | None:intergenic | 20.0% |
| !!! | AAATCTAAAAGTATACAACT+AGG | - | chr1.3:22802381-22802400 | None:intergenic | 20.0% |
| !!! | AACTCAAAAAAAGTATTTGA+AGG | + | chr1.3:22800799-22800818 | MS.gene91155:intron | 20.0% |
| !!! | AATATATCACTTAGTTTTTG+GGG | - | chr1.3:22802884-22802903 | None:intergenic | 20.0% |
| !!! | AATCAAATCATTTGTTAGTA+CGG | - | chr1.3:22803557-22803576 | None:intergenic | 20.0% |
| !!! | ACTCAAAAAAAGTATTTGAA+GGG | + | chr1.3:22800800-22800819 | MS.gene91155:intron | 20.0% |
| !!! | ACTGAATCTTTTAAAAAAGA+TGG | + | chr1.3:22801094-22801113 | MS.gene91155:intron | 20.0% |
| !!! | AGAAAATTCAATTTTCAGTT+TGG | - | chr1.3:22804130-22804149 | None:intergenic | 20.0% |
| !!! | ATATAACATTTAAAGCATAG+TGG | + | chr1.3:22803801-22803820 | MS.gene91155:intron | 20.0% |
| !!! | ATATTTTTCCTCAAAATTGA+AGG | - | chr1.3:22801699-22801718 | None:intergenic | 20.0% |
| !!! | ATGTATTGATCTAATAATAG+GGG | + | chr1.3:22803502-22803521 | MS.gene91155:intron | 20.0% |
| !!! | CAAACTCTAGAAATTTATTT+AGG | + | chr1.3:22801609-22801628 | MS.gene91155:intron | 20.0% |
| !!! | CTTAATTGTTATCTCTTTTT+TGG | + | chr1.3:22801761-22801780 | MS.gene91155:intron | 20.0% |
| !!! | GTATGTATTGATCTAATAAT+AGG | + | chr1.3:22803500-22803519 | MS.gene91155:intron | 20.0% |
| !!! | TAATTGTTATCTCTTTTTTG+GGG | + | chr1.3:22801763-22801782 | MS.gene91155:intron | 20.0% |
| !!! | TGTTGATTTTGATAGTTAAA+TGG | + | chr1.3:22801992-22802011 | MS.gene91155:intron | 20.0% |
| !!! | TTAAACTGAAAGTGTAAATA+TGG | + | chr1.3:22800624-22800643 | MS.gene91155:intron | 20.0% |
| !!! | TTTTTGAGTTCTTTCAAATT+AGG | - | chr1.3:22800789-22800808 | None:intergenic | 20.0% |
| ! | AAAAATATGCTTACCTAACA+TGG | - | chr1.3:22801899-22801918 | None:intergenic | 25.0% |
| ! | AAAACAAAGGTCTTTCAAAA+AGG | - | chr1.3:22803717-22803736 | None:intergenic | 25.0% |
| ! | AAAAGCTATTAACATGATGT+TGG | - | chr1.3:22803382-22803401 | None:intergenic | 25.0% |
| ! | AAAATTGGTTACAAAACTGA+TGG | + | chr1.3:22800242-22800261 | MS.gene91155:intron | 25.0% |
| ! | AAACTATCAAAACCTTATTC+AGG | - | chr1.3:22803426-22803445 | None:intergenic | 25.0% |
| ! | AAGTTTATTCTTGAAGTGAT+AGG | - | chr1.3:22802436-22802455 | None:intergenic | 25.0% |
| ! | AATTAAGTTTCTCTGTTTAG+AGG | - | chr1.3:22802506-22802525 | None:intergenic | 25.0% |
| ! | ACAAAACTTCAGATATTCAT+AGG | - | chr1.3:22802163-22802182 | None:intergenic | 25.0% |
| ! | ACAACTATCAATGTAAAACA+TGG | - | chr1.3:22804211-22804230 | None:intergenic | 25.0% |
| ! | ACCAAAAAAATTCAAGGTTT+CGG | + | chr1.3:22800371-22800390 | MS.gene91155:intron | 25.0% |
| ! | AGAAAAGTAAAGATATAGGT+AGG | + | chr1.3:22801376-22801395 | MS.gene91155:intron | 25.0% |
| ! | AGAAGCAATGATATAAGAAA+AGG | - | chr1.3:22801189-22801208 | None:intergenic | 25.0% |
| ! | AGGTTGTAACTATCATAATT+CGG | - | chr1.3:22802099-22802118 | None:intergenic | 25.0% |
| ! | AGTACTTACTCTTGAATAAT+CGG | + | chr1.3:22803108-22803127 | MS.gene91155:intron | 25.0% |
| ! | ATATACAATGTTAACCACAA+AGG | - | chr1.3:22801953-22801972 | None:intergenic | 25.0% |
| ! | ATCATAATTCGGAATATACA+TGG | - | chr1.3:22802088-22802107 | None:intergenic | 25.0% |
| ! | ATCCATTTGCATCTTTATTA+AGG | + | chr1.3:22803687-22803706 | MS.gene91155:intron | 25.0% |
| ! | CTGTATGAATATTGCATTTA+TGG | - | chr1.3:22802644-22802663 | None:intergenic | 25.0% |
| ! | GCAAATTCATAAGATAGTAA+AGG | - | chr1.3:22801665-22801684 | None:intergenic | 25.0% |
| ! | GGATATTATTGATGCAAATT+CGG | + | chr1.3:22800173-22800192 | MS.gene91155:intron | 25.0% |
| ! | TATATCTACAGATGTTTCAA+TGG | - | chr1.3:22803784-22803803 | None:intergenic | 25.0% |
| ! | TCTAGATACAATCATCAAAT+AGG | - | chr1.3:22801355-22801374 | None:intergenic | 25.0% |
| ! | TTATGCAGAAAAATTAAGAG+TGG | + | chr1.3:22803218-22803237 | MS.gene91155:intron | 25.0% |
| ! | TTCCTTAATAAAGATGCAAA+TGG | - | chr1.3:22803692-22803711 | None:intergenic | 25.0% |
| !! | AAAGTGCCATTAAAATTGTT+GGG | + | chr1.3:22803874-22803893 | MS.gene91155:intron | 25.0% |
| !! | AACTTTCCCAACAATTTTAA+TGG | - | chr1.3:22803883-22803902 | None:intergenic | 25.0% |
| !! | AAGGATAACTTTTATCAATG+AGG | - | chr1.3:22804169-22804188 | None:intergenic | 25.0% |
| !! | AGATCAATACATACTTGTTT+TGG | - | chr1.3:22803494-22803513 | None:intergenic | 25.0% |
| !! | ATGATTTGATTTCAATAGCT+AGG | + | chr1.3:22803566-22803585 | MS.gene91155:intron | 25.0% |
| !! | TATGATAATGATTCAATGGT+TGG | + | chr1.3:22802208-22802227 | MS.gene91155:intron | 25.0% |
| !! | TTCAATTTTCAGTTTGGATT+TGG | - | chr1.3:22804124-22804143 | None:intergenic | 25.0% |
| !! | TTTACATTGATAGTTGTGTT+TGG | + | chr1.3:22804214-22804233 | MS.gene91155:intron | 25.0% |
| !!! | AAAAGTGCCATTAAAATTGT+TGG | + | chr1.3:22803873-22803892 | MS.gene91155:intron | 25.0% |
| !!! | ACCTTGAATTTTTTTGGTTT+CGG | - | chr1.3:22800369-22800388 | None:intergenic | 25.0% |
| !!! | ACTATCTGGAAAAAGTATTT+AGG | + | chr1.3:22803252-22803271 | MS.gene91155:intron | 25.0% |
| !!! | AGCAAAAGCACATTTTTTTT+TGG | + | chr1.3:22803080-22803099 | MS.gene91155:intron | 25.0% |
| !!! | GATCAATACATACTTGTTTT+GGG | - | chr1.3:22803493-22803512 | None:intergenic | 25.0% |
| !!! | TATATTTTGATTGAAGAGCA+TGG | + | chr1.3:22802898-22802917 | MS.gene91155:intron | 25.0% |
| !!! | TCACATTGTTGATTTTCTAA+TGG | - | chr1.3:22800282-22800301 | None:intergenic | 25.0% |
| AACCAACTAGATAATAAGCT+CGG | + | chr1.3:22803965-22803984 | MS.gene91155:intron | 30.0% | |
| AATGTGATCTCACCTATTTA+AGG | + | chr1.3:22800295-22800314 | MS.gene91155:intron | 30.0% | |
| ACAATTCATCGAACATGTAA+GGG | - | chr1.3:22800064-22800083 | None:intergenic | 30.0% | |
| ACCGAAACCAAAAAAATTCA+AGG | + | chr1.3:22800365-22800384 | MS.gene91155:intron | 30.0% | |
| AGAAAGATGAGATATTGTCT+AGG | - | chr1.3:22803469-22803488 | None:intergenic | 30.0% | |
| AGTGTTCCAACAGAATTATA+AGG | + | chr1.3:22800588-22800607 | MS.gene91155:intron | 30.0% | |
| CAACACTAGTGTTTATATAG+TGG | - | chr1.3:22800507-22800526 | None:intergenic | 30.0% | |
| CCAAAAAAATTCAAGGTTTC+GGG | + | chr1.3:22800372-22800391 | MS.gene91155:intron | 30.0% | |
| CTAATAATAGGGGTAAAAGA+GGG | + | chr1.3:22803512-22803531 | MS.gene91155:intron | 30.0% | |
| CTTCTAACACTACTTCTTTA+GGG | - | chr1.3:22801220-22801239 | None:intergenic | 30.0% | |
| CTTGTGATGAGATTATGAAA+CGG | - | chr1.3:22803755-22803774 | None:intergenic | 30.0% | |
| GTCAATGTAAAAATTGCCTT+TGG | + | chr1.3:22803130-22803149 | MS.gene91155:intron | 30.0% | |
| TATAAGCGATGAGCTAAAAT+TGG | + | chr1.3:22800227-22800246 | MS.gene91155:intron | 30.0% | |
| TATAATTCTGTTGGAACACT+AGG | - | chr1.3:22800588-22800607 | None:intergenic | 30.0% | |
| TATACTATGAATGTCACAAC+TGG | - | chr1.3:22802353-22802372 | None:intergenic | 30.0% | |
| TCTAATAATAGGGGTAAAAG+AGG | + | chr1.3:22803511-22803530 | MS.gene91155:intron | 30.0% | |
| TCTACAAAATGTTACTGTAC+TGG | + | chr1.3:22802248-22802267 | MS.gene91155:intron | 30.0% | |
| TCTTCTAACACTACTTCTTT+AGG | - | chr1.3:22801221-22801240 | None:intergenic | 30.0% | |
| TGAAAAAGAAAAGGATGAAG+CGG | + | chr1.3:22800699-22800718 | MS.gene91155:intron | 30.0% | |
| TGTATGAGAGACTTAATGTT+TGG | + | chr1.3:22803934-22803953 | MS.gene91155:intron | 30.0% | |
| TTATTGATGCAAATTCGGTT+AGG | + | chr1.3:22800178-22800197 | MS.gene91155:intron | 30.0% | |
| TTTGTCAAACAACATGATGT+TGG | - | chr1.3:22803279-22803298 | None:intergenic | 30.0% | |
| ! | AACAGTTAGCTTAATGTGTT+TGG | + | chr1.3:22804006-22804025 | MS.gene91155:intron | 30.0% |
| ! | AACATTTAAAGCATAGTGGA+TGG | + | chr1.3:22803805-22803824 | MS.gene91155:intron | 30.0% |
| ! | AAGTACATTTTGCCTGAATA+AGG | + | chr1.3:22803411-22803430 | MS.gene91155:intron | 30.0% |
| ! | AGTGAAATTGTTAGTCTGTA+AGG | + | chr1.3:22800140-22800159 | MS.gene91155:intron | 30.0% |
| ! | GTGAAATTGTTAGTCTGTAA+GGG | + | chr1.3:22800141-22800160 | MS.gene91155:intron | 30.0% |
| ! | TAATCAATTTAGGGTCTGTT+TGG | + | chr1.3:22800651-22800670 | MS.gene91155:intron | 30.0% |
| ! | TCCAAACTAATATTGACTGT+GGG | - | chr1.3:22802704-22802723 | None:intergenic | 30.0% |
| ! | TCTGTGCATTATCTGTTTTA+AGG | - | chr1.3:22802608-22802627 | None:intergenic | 30.0% |
| ! | TTTTCATGTTTGTCAAACAG+TGG | - | chr1.3:22803184-22803203 | None:intergenic | 30.0% |
| !! | ACATTTAAAGCATAGTGGAT+GGG | + | chr1.3:22803806-22803825 | MS.gene91155:intron | 30.0% |
| !! | TGATTGATAGCTCTAATTTG+TGG | + | chr1.3:22804256-22804275 | MS.gene91155:intron | 30.0% |
| !!! | TACTGTACTGGTTATTTTCA+GGG | + | chr1.3:22802260-22802279 | MS.gene91155:intron | 30.0% |
| !!! | TTACTGTACTGGTTATTTTC+AGG | + | chr1.3:22802259-22802278 | MS.gene91155:intron | 30.0% |
| AAACACCTAAATTCCCTGTT+TGG | + | chr1.3:22802740-22802759 | MS.gene91155:intron | 35.0% | |
| AACACCTAAATTCCCTGTTT+GGG | + | chr1.3:22802741-22802760 | MS.gene91155:intron | 35.0% | |
| AATTACAGCAAAGTGATACG+AGG | + | chr1.3:22802522-22802541 | MS.gene91155:intron | 35.0% | |
| ACCCACAGTCAATATTAGTT+TGG | + | chr1.3:22802700-22802719 | MS.gene91155:intron | 35.0% | |
| AGTTAGCACATGATGATTGA+TGG | + | chr1.3:22802979-22802998 | MS.gene91155:intron | 35.0% | |
| ATAGGTAGGAGCAATGATTT+AGG | + | chr1.3:22801390-22801409 | MS.gene91155:intron | 35.0% | |
| ATTCTTCTCCAAAGTTTGAG+AGG | + | chr1.3:22804073-22804092 | MS.gene91155:intron | 35.0% | |
| CAAGTGTGATGTAATGTACA+TGG | + | chr1.3:22803620-22803639 | MS.gene91155:intron | 35.0% | |
| CAATTCATCGAACATGTAAG+GGG | - | chr1.3:22800063-22800082 | None:intergenic | 35.0% | |
| CACTAGTGTTTATATAGTGG+AGG | - | chr1.3:22800504-22800523 | None:intergenic | 35.0% | |
| CATTCAATCTATGCAGCAAA+AGG | + | chr1.3:22800010-22800029 | MS.gene91155:CDS | 35.0% | |
| CTCAAAATTGAAGGAAGATC+TGG | - | chr1.3:22801690-22801709 | None:intergenic | 35.0% | |
| CTCAATTTCCTCTCAAACTT+TGG | - | chr1.3:22804084-22804103 | None:intergenic | 35.0% | |
| CTTGCGAATAGAATTAACAG+TGG | - | chr1.3:22799937-22799956 | None:intergenic | 35.0% | |
| GAATTGCATATGTAGCTGAA+TGG | - | chr1.3:22804057-22804076 | None:intergenic | 35.0% | |
| GACAATTCATCGAACATGTA+AGG | - | chr1.3:22800065-22800084 | None:intergenic | 35.0% | |
| GATGGTCTATAAAGCCATAT+GGG | + | chr1.3:22804346-22804365 | MS.gene91155:CDS | 35.0% | |
| GCGTTGAAATGAACAGATAT+TGG | + | chr1.3:22803037-22803056 | MS.gene91155:intron | 35.0% | |
| GTCTGTTTGGAAGTTTATGT+GGG | + | chr1.3:22800664-22800683 | MS.gene91155:intron | 35.0% | |
| GTTCATTTCAACGCTAGAAA+TGG | - | chr1.3:22803031-22803050 | None:intergenic | 35.0% | |
| GTTCCAACAGAATTATAAGG+AGG | + | chr1.3:22800591-22800610 | MS.gene91155:intron | 35.0% | |
| TACATGGAATAGTGACATTG+CGG | + | chr1.3:22803636-22803655 | MS.gene91155:intron | 35.0% | |
| TCTGTTTGGAAGTTTATGTG+GGG | + | chr1.3:22800665-22800684 | MS.gene91155:intron | 35.0% | |
| TGGATTCAAATCACACTATC+TGG | + | chr1.3:22803238-22803257 | MS.gene91155:intron | 35.0% | |
| TGTATATACATGCACACAGA+GGG | + | chr1.3:22801966-22801985 | MS.gene91155:intron | 35.0% | |
| TTACGGTAACAACAAATCCA+CGG | + | chr1.3:22799815-22799834 | MS.gene91155:CDS | 35.0% | |
| TTGTATATACATGCACACAG+AGG | + | chr1.3:22801965-22801984 | MS.gene91155:intron | 35.0% | |
| ! | AATTGTTAGTCTGTAAGGGT+TGG | + | chr1.3:22800145-22800164 | MS.gene91155:intron | 35.0% |
| ! | ACTAATATTGACTGTGGGTA+AGG | - | chr1.3:22802699-22802718 | None:intergenic | 35.0% |
| ! | AGAATTATAAGGAGGCACAA+TGG | + | chr1.3:22800599-22800618 | MS.gene91155:intron | 35.0% |
| ! | AGTGTTTATATAGTGGAGGT+AGG | - | chr1.3:22800500-22800519 | None:intergenic | 35.0% |
| ! | ATTGTTAGTCTGTAAGGGTT+GGG | + | chr1.3:22800146-22800165 | MS.gene91155:intron | 35.0% |
| ! | ATTTGTTAGTACGGCTTTGA+GGG | - | chr1.3:22803548-22803567 | None:intergenic | 35.0% |
| ! | CAGATCTTCCTTCAATTTTG+AGG | + | chr1.3:22801688-22801707 | MS.gene91155:intron | 35.0% |
| ! | CTCCAAACTAATATTGACTG+TGG | - | chr1.3:22802705-22802724 | None:intergenic | 35.0% |
| ! | CTCTTCTATGTGAGACTTTT+AGG | + | chr1.3:22800535-22800554 | MS.gene91155:intron | 35.0% |
| ! | TCATCAAAGCATCAAACTCT+AGG | - | chr1.3:22802407-22802426 | None:intergenic | 35.0% |
| ! | TGGTACACACTTTTGCAAAA+GGG | - | chr1.3:22800464-22800483 | None:intergenic | 35.0% |
| ! | TTTGTCAAACAGTGGTGTTT+TGG | - | chr1.3:22803176-22803195 | None:intergenic | 35.0% |
| !! | CGACTTGCTCTAAAAGATAA+AGG | + | chr1.3:22801821-22801840 | MS.gene91155:intron | 35.0% |
| !! | GCTAACTGTTATTTCATGAG+AGG | - | chr1.3:22803996-22804015 | None:intergenic | 35.0% |
| !! | TTTGCTTTTACTTCCCACAA+GGG | - | chr1.3:22803066-22803085 | None:intergenic | 35.0% |
| !! | TTTTGCTTTTACTTCCCACA+AGG | - | chr1.3:22803067-22803086 | None:intergenic | 35.0% |
| !!! | CCCGAAACCTTGAATTTTTT+TGG | - | chr1.3:22800375-22800394 | None:intergenic | 35.0% |
| AAAAGAGAGAAAGCAACCGT+TGG | + | chr1.3:22802464-22802483 | MS.gene91155:intron | 40.0% | |
| AAGTTATCCTTGACACCTTG+AGG | + | chr1.3:22804178-22804197 | MS.gene91155:intron | 40.0% | |
| AATAGAGGATTTCAGGAGCT+AGG | + | chr1.3:22800726-22800745 | MS.gene91155:intron | 40.0% | |
| AGAAAAGTCCTTGAAGAAGC+AGG | + | chr1.3:22802662-22802681 | MS.gene91155:intron | 40.0% | |
| AGAGCAGTTTAATTCCAGGT+TGG | - | chr1.3:22801163-22801182 | None:intergenic | 40.0% | |
| ATACTTCATCCTCCAACCAA+CGG | - | chr1.3:22802483-22802502 | None:intergenic | 40.0% | |
| ATAGAGGATTTCAGGAGCTA+GGG | + | chr1.3:22800727-22800746 | MS.gene91155:intron | 40.0% | |
| ATGATTACGAAAGAGAACCG+TGG | - | chr1.3:22799835-22799854 | None:intergenic | 40.0% | |
| ATGCAAATTCGGTTAGGTAG+AGG | + | chr1.3:22800184-22800203 | MS.gene91155:intron | 40.0% | |
| ATGGTATGTTATGTCTGCAG+AGG | - | chr1.3:22803012-22803031 | None:intergenic | 40.0% | |
| CAATAGCTAGGCTTGAATGT+TGG | + | chr1.3:22803578-22803597 | MS.gene91155:intron | 40.0% | |
| CACCGAGCTTATTATCTAGT+TGG | - | chr1.3:22803970-22803989 | None:intergenic | 40.0% | |
| CGGAAGTAATAGAGGATTTC+AGG | + | chr1.3:22800719-22800738 | MS.gene91155:intron | 40.0% | |
| CTTATGCACGACATTTCCAA+AGG | - | chr1.3:22803149-22803168 | None:intergenic | 40.0% | |
| GAGAAGAGCAGTTTAATTCC+AGG | - | chr1.3:22801167-22801186 | None:intergenic | 40.0% | |
| GAGCAGTTTAATTCCAGGTT+GGG | - | chr1.3:22801162-22801181 | None:intergenic | 40.0% | |
| GAGTATAAGAGCAGAAACAG+AGG | + | chr1.3:22801239-22801258 | MS.gene91155:intron | 40.0% | |
| GCTACTAATGTAAACGATGC+TGG | + | chr1.3:22799969-22799988 | MS.gene91155:CDS | 40.0% | |
| GGATGGTCTATAAAGCCATA+TGG | + | chr1.3:22804345-22804364 | MS.gene91155:CDS | 40.0% | |
| GGCAAAATGTACTTGCAAGA+AGG | - | chr1.3:22803405-22803424 | None:intergenic | 40.0% | |
| GGTCTGTTTGGAAGTTTATG+TGG | + | chr1.3:22800663-22800682 | MS.gene91155:intron | 40.0% | |
| GTAAAGGATGCTTATGGTGA+CGG | + | chr1.3:22801870-22801889 | MS.gene91155:CDS | 40.0% | |
| GTCTCTGTAAAGGATGCTTA+TGG | + | chr1.3:22801864-22801883 | MS.gene91155:CDS | 40.0% | |
| GTGCAAGCAGTCTTTATAGA+TGG | + | chr1.3:22802920-22802939 | MS.gene91155:intron | 40.0% | |
| GTGCCTCCTTATAATTCTGT+TGG | - | chr1.3:22800597-22800616 | None:intergenic | 40.0% | |
| TACATCACACTTGTGACTTC+AGG | - | chr1.3:22803613-22803632 | None:intergenic | 40.0% | |
| TCTCTAGCGTTGTGTGATTT+AGG | - | chr1.3:22800898-22800917 | None:intergenic | 40.0% | |
| TGCAGAAACAGTCTCTGTAA+AGG | + | chr1.3:22801854-22801873 | MS.gene91155:CDS | 40.0% | |
| TGCTGCATAGATTGAATGAG+AGG | - | chr1.3:22800008-22800027 | None:intergenic | 40.0% | |
| TTTGGAAGTTTATGTGGGGA+GGG | + | chr1.3:22800669-22800688 | MS.gene91155:intron | 40.0% | |
| ! | AATATTGACTGTGGGTAAGG+AGG | - | chr1.3:22802696-22802715 | None:intergenic | 40.0% |
| ! | ATATTGACTGTGGGTAAGGA+GGG | - | chr1.3:22802695-22802714 | None:intergenic | 40.0% |
| ! | ATTTGAAGTAGGGTCACCAT+GGG | + | chr1.3:22802774-22802793 | MS.gene91155:intron | 40.0% |
| ! | CATTTGTTAGTACGGCTTTG+AGG | - | chr1.3:22803549-22803568 | None:intergenic | 40.0% |
| ! | GAGAGAAGTAGTTTGTGAAG+TGG | - | chr1.3:22799874-22799893 | None:intergenic | 40.0% |
| ! | GTGGTACACACTTTTGCAAA+AGG | - | chr1.3:22800465-22800484 | None:intergenic | 40.0% |
| ! | TAGTTTGTGAAGTGGATCTG+AGG | - | chr1.3:22799866-22799885 | None:intergenic | 40.0% |
| ! | TCGGTTTTTCGTTACCTTTG+TGG | + | chr1.3:22801936-22801955 | MS.gene91155:intron | 40.0% |
| ! | TGCCATGTGCATTTGAAGTA+GGG | + | chr1.3:22802764-22802783 | MS.gene91155:intron | 40.0% |
| ! | TTAATTCCAGGTTGGGAGTT+TGG | - | chr1.3:22801155-22801174 | None:intergenic | 40.0% |
| !! | ATTTTCAGGGCCACTTTCTA+TGG | + | chr1.3:22802273-22802292 | MS.gene91155:intron | 40.0% |
| !! | GTGGATTTGTTGTTACCGTA+AGG | - | chr1.3:22799816-22799835 | None:intergenic | 40.0% |
| !! | TTAGCTTTGCTATGCATAGC+TGG | - | chr1.3:22800988-22801007 | None:intergenic | 40.0% |
| !! | TTGCTTTTACTTCCCACAAG+GGG | - | chr1.3:22803065-22803084 | None:intergenic | 40.0% |
| AAACATGGAACAGTGCCTCA+AGG | - | chr1.3:22804196-22804215 | None:intergenic | 45.0% | |
| AAAGTGTGTACCACACCCTT+GGG | + | chr1.3:22800471-22800490 | MS.gene91155:intron | 45.0% | |
| AAGAGCTTTGCGGAGTAAAG+TGG | - | chr1.3:22799778-22799797 | None:intergenic | 45.0% | |
| AATCAGCCGTGAATAGGCAA+AGG | + | chr1.3:22804324-22804343 | MS.gene91155:CDS | 45.0% | |
| ACCGTAAGGTCGAACCAAAA+CGG | - | chr1.3:22799802-22799821 | None:intergenic | 45.0% | |
| AGTTGTACGCTGTTGTGAGT+AGG | - | chr1.3:22801743-22801762 | None:intergenic | 45.0% | |
| ATTTCAGGAGCTAGGGTTTG+GGG | + | chr1.3:22800734-22800753 | MS.gene91155:intron | 45.0% | |
| CACTTTCTATGGCTGACTGA+AGG | + | chr1.3:22802284-22802303 | MS.gene91155:intron | 45.0% | |
| CGTTGTGTGATTTAGGTAGC+TGG | - | chr1.3:22800891-22800910 | None:intergenic | 45.0% | |
| CTGCCAAGAGTTGACTAATG+GGG | + | chr1.3:22800325-22800344 | MS.gene91155:intron | 45.0% | |
| CTTCAGTCAGCCATAGAAAG+TGG | - | chr1.3:22802286-22802305 | None:intergenic | 45.0% | |
| GAATATCGCCTGCTTCTTCA+AGG | - | chr1.3:22802673-22802692 | None:intergenic | 45.0% | |
| GACCATCCTTTGCCTATTCA+CGG | - | chr1.3:22804333-22804352 | None:intergenic | 45.0% | |
| GACCCTACTTCAAATGCACA+TGG | - | chr1.3:22802769-22802788 | None:intergenic | 45.0% | |
| GATTTCAGGAGCTAGGGTTT+GGG | + | chr1.3:22800733-22800752 | MS.gene91155:intron | 45.0% | |
| GCATATGTAGCTGAATGGTG+AGG | - | chr1.3:22804052-22804071 | None:intergenic | 45.0% | |
| GCTGAATGGTGAGGAATAAG+CGG | - | chr1.3:22804043-22804062 | None:intergenic | 45.0% | |
| GCTGCCAAGAGTTGACTAAT+GGG | + | chr1.3:22800324-22800343 | MS.gene91155:intron | 45.0% | |
| GGATGAAGCGGAAGTAATAG+AGG | + | chr1.3:22800711-22800730 | MS.gene91155:intron | 45.0% | |
| GGGAGGGCTTGAAAAAGAAA+AGG | + | chr1.3:22800690-22800709 | MS.gene91155:intron | 45.0% | |
| GGTCTATAAAGCCATATGGG+AGG | + | chr1.3:22804349-22804368 | MS.gene91155:CDS | 45.0% | |
| GTGTGATTTAGGTAGCTGGT+GGG | - | chr1.3:22800887-22800906 | None:intergenic | 45.0% | |
| GTTTGGAAGTTTATGTGGGG+AGG | + | chr1.3:22800668-22800687 | MS.gene91155:intron | 45.0% | |
| TGCCAAGAGTTGACTAATGG+GGG | + | chr1.3:22800326-22800345 | MS.gene91155:intron | 45.0% | |
| TGTGTGATTTAGGTAGCTGG+TGG | - | chr1.3:22800888-22800907 | None:intergenic | 45.0% | |
| TTGAGTTTGAGCTTGACCCA+TGG | - | chr1.3:22802793-22802812 | None:intergenic | 45.0% | |
| TTGCGGCGTGATTGAACAAA+TGG | + | chr1.3:22803653-22803672 | MS.gene91155:intron | 45.0% | |
| TTGGAAGTTTATGTGGGGAG+GGG | + | chr1.3:22800670-22800689 | MS.gene91155:intron | 45.0% | |
| TTTAGGTAGCTGGTGGGATA+AGG | - | chr1.3:22800881-22800900 | None:intergenic | 45.0% | |
| ! | AAAAGTGTGTACCACACCCT+TGG | + | chr1.3:22800470-22800489 | MS.gene91155:intron | 45.0% |
| ! | CATTTGAAGTAGGGTCACCA+TGG | + | chr1.3:22802773-22802792 | MS.gene91155:intron | 45.0% |
| ! | GTGCCATGTGCATTTGAAGT+AGG | + | chr1.3:22802763-22802782 | MS.gene91155:intron | 45.0% |
| !! | AGCATAGTGGATGGGATGAA+AGG | + | chr1.3:22803814-22803833 | MS.gene91155:intron | 45.0% |
| AAGTTTATGTGGGGAGGGGA+GGG | + | chr1.3:22800674-22800693 | MS.gene91155:intron | 50.0% | |
| AATGCACATGGCACCCAAAC+AGG | - | chr1.3:22802757-22802776 | None:intergenic | 50.0% | |
| ACAACCCTCTCCTGTTAACC+GGG | + | chr1.3:22800954-22800973 | MS.gene91155:intron | 50.0% | |
| ACAGATATTGGCACCCCTTG+TGG | + | chr1.3:22803049-22803068 | MS.gene91155:intron | 50.0% | |
| ACCCCCCATTAGTCAACTCT+TGG | - | chr1.3:22800331-22800350 | None:intergenic | 50.0% | |
| AGCCGTGAATAGGCAAAGGA+TGG | + | chr1.3:22804328-22804347 | MS.gene91155:CDS | 50.0% | |
| AGCTTTGCGGAGTAAAGTGG+TGG | - | chr1.3:22799775-22799794 | None:intergenic | 50.0% | |
| AGGGACAATCAGCCGTGAAT+AGG | + | chr1.3:22804318-22804337 | MS.gene91155:CDS | 50.0% | |
| AGTCTGTAAGGGTTGGGACT+GGG | + | chr1.3:22800152-22800171 | MS.gene91155:intron | 50.0% | |
| ATGCACATGGCACCCAAACA+GGG | - | chr1.3:22802756-22802775 | None:intergenic | 50.0% | |
| CACAACCCTCTCCTGTTAAC+CGG | + | chr1.3:22800953-22800972 | MS.gene91155:intron | 50.0% | |
| CAGATATTGGCACCCCTTGT+GGG | + | chr1.3:22803050-22803069 | MS.gene91155:intron | 50.0% | |
| CCAAAACGGGAAGAGCTTTG+CGG | - | chr1.3:22799788-22799807 | None:intergenic | 50.0% | |
| CCGTAAGGTCGAACCAAAAC+GGG | - | chr1.3:22799801-22799820 | None:intergenic | 50.0% | |
| CGCTGCCAAGAGTTGACTAA+TGG | + | chr1.3:22800323-22800342 | MS.gene91155:intron | 50.0% | |
| GAGAGAAAGCAACCGTTGGT+TGG | + | chr1.3:22802468-22802487 | MS.gene91155:intron | 50.0% | |
| GAGAGGGTTGTGTTAGACCT+CGG | - | chr1.3:22800945-22800964 | None:intergenic | 50.0% | |
| GCCAAGAGTTGACTAATGGG+GGG | + | chr1.3:22800327-22800346 | MS.gene91155:intron | 50.0% | |
| GCTTATATGAAGAGCTCCCC+TGG | - | chr1.3:22800214-22800233 | None:intergenic | 50.0% | |
| GCTTTGCGGAGTAAAGTGGT+GGG | - | chr1.3:22799774-22799793 | None:intergenic | 50.0% | |
| GGATTTCAGGAGCTAGGGTT+TGG | + | chr1.3:22800732-22800751 | MS.gene91155:intron | 50.0% | |
| GGCACCCAAACAGGGAATTT+AGG | - | chr1.3:22802748-22802767 | None:intergenic | 50.0% | |
| GGCAGCGTTGCTCCTTAAAT+AGG | - | chr1.3:22800310-22800329 | None:intergenic | 50.0% | |
| TAGTCTGTAAGGGTTGGGAC+TGG | + | chr1.3:22800151-22800170 | MS.gene91155:intron | 50.0% | |
| TTTCAGGAGCTAGGGTTTGG+GGG | + | chr1.3:22800735-22800754 | MS.gene91155:intron | 50.0% | |
| TTTGGAGGGAGGGAATTGGA+GGG | - | chr1.3:22801137-22801156 | None:intergenic | 50.0% | |
| ! | AACAGTGCCTCAAGGTGTCA+AGG | - | chr1.3:22804188-22804207 | None:intergenic | 50.0% |
| ! | AAGTTTTACGTTGACCGCCG+AGG | + | chr1.3:22800925-22800944 | MS.gene91155:intron | 50.0% |
| ! | AGAAAGCAACCGTTGGTTGG+AGG | + | chr1.3:22802471-22802490 | MS.gene91155:intron | 50.0% |
| ! | ATTCCAGGTTGGGAGTTTGG+AGG | - | chr1.3:22801152-22801171 | None:intergenic | 50.0% |
| ! | GTTGTATCGACAGCCTTCGA+GGG | + | chr1.3:22804299-22804318 | MS.gene91155:CDS | 50.0% |
| ! | TGTTGTATCGACAGCCTTCG+AGG | + | chr1.3:22804298-22804317 | MS.gene91155:CDS | 50.0% |
| ! | TTCCAGGTTGGGAGTTTGGA+GGG | - | chr1.3:22801151-22801170 | None:intergenic | 50.0% |
| !! | ACTCTGAAGCTCCTCCCATA+TGG | - | chr1.3:22804363-22804382 | None:intergenic | 50.0% |
| !!! | CCCGTTTTGGTTCGACCTTA+CGG | + | chr1.3:22799798-22799817 | MS.gene91155:CDS | 50.0% |
| AAGCTCGAACGATGCGCGTA+TGG | + | chr1.3:22800415-22800434 | MS.gene91155:intron | 55.0% | |
| AAGGCCCGGTTAACAGGAGA+GGG | - | chr1.3:22800961-22800980 | None:intergenic | 55.0% | |
| AGGGTTGTGTTAGACCTCGG+CGG | - | chr1.3:22800942-22800961 | None:intergenic | 55.0% | |
| AGGTTGGGAGTTTGGAGGGA+GGG | - | chr1.3:22801147-22801166 | None:intergenic | 55.0% | |
| AGTGGAGGTAGGACTCCCAA+GGG | - | chr1.3:22800489-22800508 | None:intergenic | 55.0% | |
| ATACGCGCATCGTTCGAGCT+TGG | - | chr1.3:22800416-22800435 | None:intergenic | 55.0% | |
| GAAGTTTATGTGGGGAGGGG+AGG | + | chr1.3:22800673-22800692 | MS.gene91155:intron | 55.0% | |
| GCTATGCATAGCTGGTCCCA+AGG | - | chr1.3:22800980-22800999 | None:intergenic | 55.0% | |
| GGAGTTTGGAGGGAGGGAAT+TGG | - | chr1.3:22801141-22801160 | None:intergenic | 55.0% | |
| GGTTAGGTAGAGGTCAGCCA+GGG | + | chr1.3:22800194-22800213 | MS.gene91155:intron | 55.0% | |
| GTAGCTGGTGGGATAAGGCT+TGG | - | chr1.3:22800876-22800895 | None:intergenic | 55.0% | |
| GTTAGGTAGAGGTCAGCCAG+GGG | + | chr1.3:22800195-22800214 | MS.gene91155:intron | 55.0% | |
| GTTTGGAGGGAGGGAATTGG+AGG | - | chr1.3:22801138-22801157 | None:intergenic | 55.0% | |
| TACGCGCATCGTTCGAGCTT+GGG | - | chr1.3:22800415-22800434 | None:intergenic | 55.0% | |
| TAGTGGAGGTAGGACTCCCA+AGG | - | chr1.3:22800490-22800509 | None:intergenic | 55.0% | |
| TCTCCTGTTAACCGGGCCTT+GGG | + | chr1.3:22800961-22800980 | MS.gene91155:intron | 55.0% | |
| ! | CCGCAAAGCTCTTCCCGTTT+TGG | + | chr1.3:22799785-22799804 | MS.gene91155:CDS | 55.0% |
| ! | GGCTGCTTCAGCAGGAGTTT+TGG | - | chr1.3:22804414-22804433 | None:intergenic | 55.0% |
| !! | ATGGTGACGGACGCCATGTT+AGG | + | chr1.3:22801883-22801902 | MS.gene91155:CDS | 55.0% |
| AGGTAGGACTCCCAAGGGTG+TGG | - | chr1.3:22800484-22800503 | None:intergenic | 60.0% | |
| CAAGGCCCGGTTAACAGGAG+AGG | - | chr1.3:22800962-22800981 | None:intergenic | 60.0% | |
| CACGGCTGATTGTCCCTCGA+AGG | - | chr1.3:22804315-22804334 | None:intergenic | 60.0% | |
| CGGTTAGGTAGAGGTCAGCC+AGG | + | chr1.3:22800193-22800212 | MS.gene91155:intron | 60.0% | |
| CTCCCTCCAAACTCCCAACC+TGG | + | chr1.3:22801146-22801165 | MS.gene91155:intron | 60.0% | |
| CTCTCCTGTTAACCGGGCCT+TGG | + | chr1.3:22800960-22800979 | MS.gene91155:intron | 60.0% | |
| ! | CAGGTTGGGAGTTTGGAGGG+AGG | - | chr1.3:22801148-22801167 | None:intergenic | 60.0% |
| ACTCCTGCTGAAGCAGCCGC+CGG | + | chr1.3:22804416-22804435 | MS.gene91155:CDS | 65.0% | |
| GCATAGCTGGTCCCAAGGCC+CGG | - | chr1.3:22800975-22800994 | None:intergenic | 65.0% | |
| GGTCCCAAGGCCCGGTTAAC+AGG | - | chr1.3:22800967-22800986 | None:intergenic | 65.0% | |
| CTCCTGCTGAAGCAGCCGCC+GGG | + | chr1.3:22804417-22804436 | MS.gene91155:CDS | 70.0% | |
| TTCCCGGCGGCTGCTTCAGC+AGG | - | chr1.3:22804422-22804441 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 22799741 | 22804445 | 22799741 | ID=MS.gene91155 |
| chr1.3 | mRNA | 22799741 | 22804445 | 22799741 | ID=MS.gene91155.t1;Parent=MS.gene91155 |
| chr1.3 | exon | 22799741 | 22800031 | 22799741 | ID=MS.gene91155.t1.exon1;Parent=MS.gene91155.t1 |
| chr1.3 | CDS | 22799741 | 22800031 | 22799741 | ID=cds.MS.gene91155.t1;Parent=MS.gene91155.t1 |
| chr1.3 | exon | 22801837 | 22801904 | 22801837 | ID=MS.gene91155.t1.exon2;Parent=MS.gene91155.t1 |
| chr1.3 | CDS | 22801837 | 22801904 | 22801837 | ID=cds.MS.gene91155.t1;Parent=MS.gene91155.t1 |
| chr1.3 | exon | 22804292 | 22804445 | 22804292 | ID=MS.gene91155.t1.exon3;Parent=MS.gene91155.t1 |
| chr1.3 | CDS | 22804292 | 22804445 | 22804292 | ID=cds.MS.gene91155.t1;Parent=MS.gene91155.t1 |
| Gene Sequence |
| Protein sequence |
