Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91570.t1 | KEH22972.1 | 95.1 | 266 | 13 | 0 | 1 | 266 | 1 | 266 | 6.00E-142 | 513.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91570.t1 | P50165 | 58.4 | 255 | 105 | 1 | 11 | 265 | 10 | 263 | 4.6e-82 | 305.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91570.t1 | A0A072U029 | 95.1 | 266 | 13 | 0 | 1 | 266 | 1 | 266 | 4.4e-142 | 513.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene91570 | 0.803783 | 2.96E-49 | -1.69E-46 |
| MS.gene049217 | MS.gene91570 | 0.83276 | 7.86E-56 | -1.69E-46 |
| MS.gene049222 | MS.gene91570 | 0.812723 | 3.67E-51 | -1.69E-46 |
| MS.gene049285 | MS.gene91570 | 0.824177 | 9.29E-54 | -1.69E-46 |
| MS.gene049320 | MS.gene91570 | 0.83468 | 2.61E-56 | -1.69E-46 |
| MS.gene049351 | MS.gene91570 | 0.817736 | 2.82E-52 | -1.69E-46 |
| MS.gene049369 | MS.gene91570 | 0.811222 | 7.80E-51 | -1.69E-46 |
| MS.gene049427 | MS.gene91570 | 0.832732 | 7.99E-56 | -1.69E-46 |
| MS.gene049609 | MS.gene91570 | 0.833771 | 4.40E-56 | -1.69E-46 |
| MS.gene049614 | MS.gene91570 | 0.829242 | 5.75E-55 | -1.69E-46 |
| MS.gene049661 | MS.gene91570 | 0.849387 | 3.34E-60 | -1.69E-46 |
| MS.gene049662 | MS.gene91570 | 0.841252 | 5.32E-58 | -1.69E-46 |
| MS.gene049760 | MS.gene91570 | 0.805973 | 1.03E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene91570 | 0.836255 | 1.04E-56 | -1.69E-46 |
| MS.gene049828 | MS.gene91570 | 0.814245 | 1.70E-51 | -1.69E-46 |
| MS.gene050076 | MS.gene91570 | 0.837718 | 4.41E-57 | -1.69E-46 |
| MS.gene050163 | MS.gene91570 | 0.827058 | 1.93E-54 | -1.69E-46 |
| MS.gene050165 | MS.gene91570 | 0.807016 | 6.21E-50 | -1.69E-46 |
| MS.gene050333 | MS.gene91570 | 0.808013 | 3.82E-50 | -1.69E-46 |
| MS.gene050353 | MS.gene91570 | -0.83254 | 8.92E-56 | -1.69E-46 |
| MS.gene050397 | MS.gene91570 | 0.813087 | 3.06E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene91570 | 0.845637 | 3.59E-59 | -1.69E-46 |
| MS.gene050686 | MS.gene91570 | 0.80662 | 7.53E-50 | -1.69E-46 |
| MS.gene050747 | MS.gene91570 | 0.803808 | 2.92E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene91570 | 0.873233 | 1.72E-67 | -1.69E-46 |
| MS.gene050770 | MS.gene91570 | 0.87569 | 2.52E-68 | -1.69E-46 |
| MS.gene050772 | MS.gene91570 | 0.861802 | 7.94E-64 | -1.69E-46 |
| MS.gene05100 | MS.gene91570 | 0.821112 | 4.80E-53 | -1.69E-46 |
| MS.gene05101 | MS.gene91570 | 0.819175 | 1.33E-52 | -1.69E-46 |
| MS.gene05105 | MS.gene91570 | 0.808211 | 3.46E-50 | -1.69E-46 |
| MS.gene051113 | MS.gene91570 | -0.808293 | 3.33E-50 | -1.69E-46 |
| MS.gene051228 | MS.gene91570 | 0.855545 | 5.87E-62 | -1.69E-46 |
| MS.gene051666 | MS.gene91570 | 0.817516 | 3.17E-52 | -1.69E-46 |
| MS.gene051692 | MS.gene91570 | 0.850374 | 1.77E-60 | -1.69E-46 |
| MS.gene051694 | MS.gene91570 | 0.84216 | 3.06E-58 | -1.69E-46 |
| MS.gene051810 | MS.gene91570 | 0.847781 | 9.31E-60 | -1.69E-46 |
| MS.gene051858 | MS.gene91570 | 0.84068 | 7.52E-58 | -1.69E-46 |
| MS.gene051877 | MS.gene91570 | 0.82701 | 1.98E-54 | -1.69E-46 |
| MS.gene052078 | MS.gene91570 | 0.807625 | 4.61E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene91570 | 0.846059 | 2.76E-59 | -1.69E-46 |
| MS.gene052290 | MS.gene91570 | 0.854085 | 1.56E-61 | -1.69E-46 |
| MS.gene052322 | MS.gene91570 | 0.843105 | 1.72E-58 | -1.69E-46 |
| MS.gene052326 | MS.gene91570 | 0.812008 | 5.26E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene91570 | 0.852703 | 3.88E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene91570 | 0.807331 | 5.33E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene91570 | 0.814683 | 1.36E-51 | -1.69E-46 |
| MS.gene052510 | MS.gene91570 | 0.802202 | 6.28E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene91570 | 0.823895 | 1.08E-53 | -1.69E-46 |
| MS.gene052777 | MS.gene91570 | -0.813383 | 2.63E-51 | -1.69E-46 |
| MS.gene052916 | MS.gene91570 | 0.827395 | 1.60E-54 | -1.69E-46 |
| MS.gene053009 | MS.gene91570 | 0.841532 | 4.49E-58 | -1.69E-46 |
| MS.gene053103 | MS.gene91570 | 0.826203 | 3.09E-54 | -1.69E-46 |
| MS.gene053104 | MS.gene91570 | 0.838234 | 3.25E-57 | -1.69E-46 |
| MS.gene053207 | MS.gene91570 | 0.84056 | 8.08E-58 | -1.69E-46 |
| MS.gene053209 | MS.gene91570 | 0.822882 | 1.87E-53 | -1.69E-46 |
| MS.gene053213 | MS.gene91570 | 0.864111 | 1.54E-64 | -1.69E-46 |
| MS.gene053286 | MS.gene91570 | 0.853624 | 2.11E-61 | -1.69E-46 |
| MS.gene053322 | MS.gene91570 | 0.867671 | 1.15E-65 | -1.69E-46 |
| MS.gene053574 | MS.gene91570 | 0.825206 | 5.32E-54 | -1.69E-46 |
| MS.gene053632 | MS.gene91570 | 0.840863 | 6.73E-58 | -1.69E-46 |
| MS.gene053813 | MS.gene91570 | 0.802834 | 4.65E-49 | -1.69E-46 |
| MS.gene053916 | MS.gene91570 | 0.813698 | 2.24E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene91570 | 0.866472 | 2.78E-65 | -1.69E-46 |
| MS.gene054600 | MS.gene91570 | 0.816284 | 5.99E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene91570 | 0.86217 | 6.12E-64 | -1.69E-46 |
| MS.gene054802 | MS.gene91570 | 0.858697 | 6.90E-63 | -1.69E-46 |
| MS.gene054803 | MS.gene91570 | 0.858346 | 8.78E-63 | -1.69E-46 |
| MS.gene054804 | MS.gene91570 | 0.860166 | 2.50E-63 | -1.69E-46 |
| MS.gene05505 | MS.gene91570 | 0.850038 | 2.20E-60 | -1.69E-46 |
| MS.gene055206 | MS.gene91570 | 0.815304 | 9.90E-52 | -1.69E-46 |
| MS.gene055212 | MS.gene91570 | 0.84756 | 1.07E-59 | -1.69E-46 |
| MS.gene055254 | MS.gene91570 | 0.870523 | 1.37E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene91570 | 0.839563 | 1.47E-57 | -1.69E-46 |
| MS.gene055289 | MS.gene91570 | 0.839037 | 2.01E-57 | -1.69E-46 |
| MS.gene055362 | MS.gene91570 | 0.835515 | 1.60E-56 | -1.69E-46 |
| MS.gene055397 | MS.gene91570 | 0.848077 | 7.71E-60 | -1.69E-46 |
| MS.gene055499 | MS.gene91570 | 0.90192 | 1.64E-78 | -1.69E-46 |
| MS.gene055647 | MS.gene91570 | 0.824068 | 9.86E-54 | -1.69E-46 |
| MS.gene055722 | MS.gene91570 | 0.852199 | 5.40E-61 | -1.69E-46 |
| MS.gene05592 | MS.gene91570 | 0.872254 | 3.66E-67 | -1.69E-46 |
| MS.gene056083 | MS.gene91570 | 0.840947 | 6.40E-58 | -1.69E-46 |
| MS.gene056191 | MS.gene91570 | 0.80537 | 1.38E-49 | -1.69E-46 |
| MS.gene056374 | MS.gene91570 | 0.857335 | 1.75E-62 | -1.69E-46 |
| MS.gene056410 | MS.gene91570 | 0.840958 | 6.35E-58 | -1.69E-46 |
| MS.gene056448 | MS.gene91570 | 0.813093 | 3.05E-51 | -1.69E-46 |
| MS.gene056452 | MS.gene91570 | 0.801927 | 7.15E-49 | -1.69E-46 |
| MS.gene056487 | MS.gene91570 | 0.816987 | 4.17E-52 | -1.69E-46 |
| MS.gene056609 | MS.gene91570 | 0.825867 | 3.71E-54 | -1.69E-46 |
| MS.gene056611 | MS.gene91570 | 0.805019 | 1.63E-49 | -1.69E-46 |
| MS.gene056657 | MS.gene91570 | 0.841805 | 3.80E-58 | -1.69E-46 |
| MS.gene056897 | MS.gene91570 | 0.805528 | 1.28E-49 | -1.69E-46 |
| MS.gene056942 | MS.gene91570 | 0.822957 | 1.79E-53 | -1.69E-46 |
| MS.gene057011 | MS.gene91570 | 0.810077 | 1.38E-50 | -1.69E-46 |
| MS.gene057123 | MS.gene91570 | 0.81361 | 2.35E-51 | -1.69E-46 |
| MS.gene057129 | MS.gene91570 | 0.87784 | 4.55E-69 | -1.69E-46 |
| MS.gene057146 | MS.gene91570 | 0.834601 | 2.73E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene91570 | 0.820957 | 5.21E-53 | -1.69E-46 |
| MS.gene057331 | MS.gene91570 | 0.833833 | 4.25E-56 | -1.69E-46 |
| MS.gene05735 | MS.gene91570 | 0.805758 | 1.14E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene91570 | 0.860482 | 2.00E-63 | -1.69E-46 |
| MS.gene057926 | MS.gene91570 | 0.834808 | 2.42E-56 | -1.69E-46 |
| MS.gene058006 | MS.gene91570 | 0.847695 | 9.83E-60 | -1.69E-46 |
| MS.gene058019 | MS.gene91570 | 0.801037 | 1.09E-48 | -1.69E-46 |
| MS.gene058323 | MS.gene91570 | 0.852558 | 4.27E-61 | -1.69E-46 |
| MS.gene058419 | MS.gene91570 | 0.827332 | 1.66E-54 | -1.69E-46 |
| MS.gene058544 | MS.gene91570 | 0.8016 | 8.34E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene91570 | 0.839335 | 1.68E-57 | -1.69E-46 |
| MS.gene058723 | MS.gene91570 | 0.84215 | 3.08E-58 | -1.69E-46 |
| MS.gene058773 | MS.gene91570 | 0.828566 | 8.37E-55 | -1.69E-46 |
| MS.gene058840 | MS.gene91570 | -0.813457 | 2.54E-51 | -1.69E-46 |
| MS.gene059022 | MS.gene91570 | 0.817477 | 3.23E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene91570 | 0.830812 | 2.38E-55 | -1.69E-46 |
| MS.gene05934 | MS.gene91570 | 0.806273 | 8.91E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene91570 | 0.869124 | 3.92E-66 | -1.69E-46 |
| MS.gene059677 | MS.gene91570 | 0.824556 | 7.57E-54 | -1.69E-46 |
| MS.gene059688 | MS.gene91570 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene059692 | MS.gene91570 | 0.803162 | 3.98E-49 | -1.69E-46 |
| MS.gene059695 | MS.gene91570 | 0.800178 | 1.63E-48 | -1.69E-46 |
| MS.gene059711 | MS.gene91570 | 0.82427 | 8.84E-54 | -1.69E-46 |
| MS.gene059718 | MS.gene91570 | 0.838016 | 3.69E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene91570 | 0.842582 | 2.37E-58 | -1.69E-46 |
| MS.gene059960 | MS.gene91570 | 0.847601 | 1.04E-59 | -1.69E-46 |
| MS.gene06037 | MS.gene91570 | 0.800073 | 1.71E-48 | -1.69E-46 |
| MS.gene060403 | MS.gene91570 | 0.801195 | 1.01E-48 | -1.69E-46 |
| MS.gene060482 | MS.gene91570 | 0.830814 | 2.38E-55 | -1.69E-46 |
| MS.gene06074 | MS.gene91570 | -0.802139 | 6.46E-49 | -1.69E-46 |
| MS.gene060804 | MS.gene91570 | 0.877293 | 7.06E-69 | -1.69E-46 |
| MS.gene060818 | MS.gene91570 | 0.84963 | 2.86E-60 | -1.69E-46 |
| MS.gene060837 | MS.gene91570 | 0.824803 | 6.62E-54 | -1.69E-46 |
| MS.gene06092 | MS.gene91570 | 0.806611 | 7.56E-50 | -1.69E-46 |
| MS.gene061041 | MS.gene91570 | 0.864756 | 9.67E-65 | -1.69E-46 |
| MS.gene061134 | MS.gene91570 | 0.819665 | 1.03E-52 | -1.69E-46 |
| MS.gene061150 | MS.gene91570 | 0.8107 | 1.01E-50 | -1.69E-46 |
| MS.gene061200 | MS.gene91570 | 0.874559 | 6.15E-68 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91570.t1 | MTR_7g063260 | 95.113 | 266 | 13 | 0 | 1 | 266 | 1 | 266 | 0.0 | 529 |
| MS.gene91570.t1 | MTR_7g063270 | 89.850 | 266 | 26 | 1 | 1 | 266 | 1 | 265 | 0.0 | 498 |
| MS.gene91570.t1 | MTR_7g063390 | 76.226 | 265 | 63 | 0 | 1 | 265 | 1 | 265 | 1.98e-150 | 421 |
| MS.gene91570.t1 | MTR_7g063360 | 75.849 | 265 | 64 | 0 | 1 | 265 | 1 | 265 | 1.91e-147 | 413 |
| MS.gene91570.t1 | MTR_7g063330 | 70.677 | 266 | 76 | 2 | 1 | 266 | 1 | 264 | 3.53e-139 | 392 |
| MS.gene91570.t1 | MTR_7g063320 | 72.348 | 264 | 72 | 1 | 1 | 264 | 1 | 263 | 2.62e-137 | 387 |
| MS.gene91570.t1 | MTR_7g063270 | 72.556 | 266 | 23 | 2 | 1 | 266 | 1 | 216 | 1.29e-134 | 379 |
| MS.gene91570.t1 | MTR_3g068070 | 59.316 | 263 | 103 | 1 | 3 | 265 | 2 | 260 | 2.43e-108 | 314 |
| MS.gene91570.t1 | MTR_4g064883 | 57.752 | 258 | 99 | 2 | 11 | 265 | 9 | 259 | 1.15e-105 | 307 |
| MS.gene91570.t1 | MTR_3g068065 | 58.964 | 251 | 99 | 1 | 16 | 266 | 17 | 263 | 6.24e-101 | 296 |
| MS.gene91570.t1 | MTR_3g068155 | 55.598 | 259 | 111 | 1 | 7 | 265 | 10 | 264 | 6.30e-101 | 296 |
| MS.gene91570.t1 | MTR_4g064887 | 54.717 | 265 | 115 | 2 | 1 | 265 | 1 | 260 | 1.39e-100 | 295 |
| MS.gene91570.t1 | MTR_3g068085 | 58.000 | 250 | 101 | 1 | 16 | 265 | 15 | 260 | 2.72e-100 | 294 |
| MS.gene91570.t1 | MTR_3g068175 | 53.409 | 264 | 119 | 1 | 2 | 265 | 3 | 262 | 2.10e-96 | 284 |
| MS.gene91570.t1 | MTR_3g068175 | 52.612 | 268 | 119 | 2 | 2 | 265 | 3 | 266 | 3.92e-94 | 278 |
| MS.gene91570.t1 | MTR_4g064883 | 58.824 | 204 | 84 | 0 | 11 | 214 | 9 | 212 | 4.84e-86 | 256 |
| MS.gene91570.t1 | MTR_4g064887 | 54.717 | 212 | 95 | 1 | 1 | 212 | 1 | 211 | 4.65e-81 | 243 |
| MS.gene91570.t1 | MTR_4g132850 | 33.984 | 256 | 158 | 6 | 12 | 266 | 5 | 250 | 1.31e-31 | 117 |
| MS.gene91570.t1 | MTR_4g131740 | 31.518 | 257 | 160 | 6 | 16 | 263 | 40 | 289 | 1.51e-26 | 105 |
| MS.gene91570.t1 | MTR_7g094510 | 30.859 | 256 | 163 | 6 | 16 | 264 | 6 | 254 | 5.33e-26 | 102 |
| MS.gene91570.t1 | MTR_7g113650 | 31.518 | 257 | 159 | 8 | 16 | 263 | 40 | 288 | 1.16e-23 | 97.4 |
| MS.gene91570.t1 | MTR_7g094520 | 31.801 | 261 | 154 | 8 | 16 | 264 | 11 | 259 | 1.36e-23 | 96.7 |
| MS.gene91570.t1 | MTR_1g082760 | 30.350 | 257 | 162 | 8 | 16 | 263 | 40 | 288 | 2.88e-23 | 96.3 |
| MS.gene91570.t1 | MTR_8g442750 | 28.137 | 263 | 162 | 6 | 16 | 263 | 14 | 264 | 3.39e-22 | 93.6 |
| MS.gene91570.t1 | MTR_1g068955 | 30.620 | 258 | 158 | 6 | 16 | 262 | 14 | 261 | 1.02e-21 | 92.0 |
| MS.gene91570.t1 | MTR_3g085740 | 29.839 | 248 | 157 | 6 | 22 | 263 | 81 | 317 | 1.09e-20 | 89.7 |
| MS.gene91570.t1 | MTR_7g080410 | 29.268 | 205 | 141 | 3 | 4 | 204 | 26 | 230 | 5.00e-20 | 87.8 |
| MS.gene91570.t1 | MTR_7g080410 | 29.268 | 205 | 141 | 3 | 4 | 204 | 26 | 230 | 5.83e-20 | 87.8 |
| MS.gene91570.t1 | MTR_4g058810 | 25.969 | 258 | 178 | 7 | 16 | 265 | 11 | 263 | 3.74e-17 | 79.3 |
| MS.gene91570.t1 | MTR_4g058840 | 26.459 | 257 | 178 | 6 | 16 | 265 | 11 | 263 | 5.16e-17 | 79.0 |
| MS.gene91570.t1 | MTR_4g058820 | 26.459 | 257 | 178 | 6 | 16 | 265 | 11 | 263 | 5.16e-17 | 79.0 |
| MS.gene91570.t1 | MTR_1196s0010 | 30.040 | 253 | 150 | 8 | 21 | 264 | 279 | 513 | 5.40e-17 | 80.5 |
| MS.gene91570.t1 | MTR_6g023910 | 28.625 | 269 | 179 | 8 | 1 | 264 | 1 | 261 | 1.09e-15 | 75.1 |
| MS.gene91570.t1 | MTR_8g044240 | 28.218 | 202 | 135 | 5 | 16 | 208 | 69 | 269 | 1.38e-15 | 75.9 |
| MS.gene91570.t1 | MTR_7g071680 | 29.474 | 285 | 173 | 9 | 3 | 266 | 18 | 295 | 1.72e-15 | 75.1 |
| MS.gene91570.t1 | MTR_4g052350 | 28.727 | 275 | 169 | 11 | 1 | 265 | 1 | 258 | 1.70e-14 | 72.0 |
| MS.gene91570.t1 | MTR_7g083870 | 27.336 | 289 | 177 | 11 | 3 | 266 | 8 | 288 | 2.06e-14 | 72.0 |
| MS.gene91570.t1 | MTR_6g023610 | 27.306 | 271 | 180 | 9 | 1 | 264 | 1 | 261 | 2.48e-14 | 71.2 |
| MS.gene91570.t1 | MTR_4g078630 | 27.925 | 265 | 166 | 5 | 16 | 266 | 19 | 272 | 3.44e-14 | 71.2 |
| MS.gene91570.t1 | MTR_4g052320 | 26.772 | 254 | 174 | 6 | 16 | 265 | 8 | 253 | 2.06e-13 | 68.9 |
| MS.gene91570.t1 | MTR_7g107670 | 28.185 | 259 | 172 | 6 | 16 | 266 | 33 | 285 | 8.65e-13 | 67.4 |
| MS.gene91570.t1 | MTR_4g052300 | 25.984 | 254 | 175 | 6 | 16 | 265 | 8 | 252 | 3.49e-12 | 65.1 |
| MS.gene91570.t1 | MTR_4g052340 | 26.000 | 250 | 174 | 6 | 16 | 262 | 14 | 255 | 3.65e-12 | 65.1 |
| MS.gene91570.t1 | MTR_7g105590 | 27.128 | 188 | 132 | 3 | 16 | 201 | 8 | 192 | 1.19e-11 | 62.8 |
| MS.gene91570.t1 | MTR_7g105580 | 24.803 | 254 | 165 | 6 | 16 | 266 | 8 | 238 | 1.27e-11 | 63.5 |
| MS.gene91570.t1 | MTR_3g020670 | 29.885 | 261 | 166 | 6 | 16 | 265 | 16 | 270 | 1.73e-11 | 63.5 |
| MS.gene91570.t1 | MTR_4g058830 | 29.032 | 155 | 100 | 5 | 116 | 265 | 60 | 209 | 1.74e-11 | 62.8 |
| MS.gene91570.t1 | MTR_7g110160 | 29.070 | 258 | 153 | 8 | 13 | 265 | 3 | 235 | 2.06e-11 | 62.8 |
| MS.gene91570.t1 | MTR_6g041980 | 29.070 | 172 | 108 | 5 | 18 | 181 | 66 | 231 | 2.71e-11 | 62.8 |
| MS.gene91570.t1 | MTR_6g041980 | 29.070 | 172 | 108 | 5 | 18 | 181 | 66 | 231 | 2.91e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91570.t1 | AT5G06060 | 58.431 | 255 | 102 | 1 | 11 | 265 | 4 | 254 | 1.31e-106 | 310 |
| MS.gene91570.t1 | AT1G07440 | 57.031 | 256 | 105 | 3 | 10 | 265 | 6 | 256 | 7.22e-102 | 298 |
| MS.gene91570.t1 | AT2G29260 | 56.693 | 254 | 106 | 1 | 12 | 265 | 64 | 313 | 6.14e-101 | 297 |
| MS.gene91570.t1 | AT2G29290 | 55.686 | 255 | 109 | 1 | 11 | 265 | 2 | 252 | 6.55e-100 | 293 |
| MS.gene91570.t1 | AT2G29320 | 58.238 | 261 | 95 | 5 | 11 | 265 | 7 | 259 | 8.03e-99 | 290 |
| MS.gene91570.t1 | AT2G29350 | 57.422 | 256 | 104 | 2 | 10 | 265 | 9 | 259 | 9.99e-99 | 290 |
| MS.gene91570.t1 | AT2G29300 | 56.923 | 260 | 99 | 4 | 11 | 265 | 2 | 253 | 4.54e-98 | 288 |
| MS.gene91570.t1 | AT2G29300 | 56.923 | 260 | 99 | 4 | 11 | 265 | 2 | 253 | 2.24e-97 | 287 |
| MS.gene91570.t1 | AT2G29360 | 54.887 | 266 | 114 | 4 | 1 | 265 | 1 | 261 | 2.42e-97 | 286 |
| MS.gene91570.t1 | AT2G29340 | 55.686 | 255 | 109 | 2 | 11 | 265 | 2 | 252 | 1.82e-96 | 284 |
| MS.gene91570.t1 | AT2G29150 | 55.513 | 263 | 112 | 2 | 1 | 263 | 1 | 258 | 2.22e-96 | 284 |
| MS.gene91570.t1 | AT2G29310 | 56.078 | 255 | 108 | 2 | 11 | 265 | 2 | 252 | 3.69e-96 | 283 |
| MS.gene91570.t1 | AT2G29340 | 55.686 | 255 | 109 | 2 | 11 | 265 | 2 | 252 | 4.85e-96 | 284 |
| MS.gene91570.t1 | AT2G30670 | 53.906 | 256 | 112 | 2 | 11 | 265 | 2 | 252 | 2.07e-94 | 278 |
| MS.gene91570.t1 | AT2G29330 | 54.902 | 255 | 111 | 2 | 11 | 265 | 2 | 252 | 3.35e-94 | 278 |
| MS.gene91570.t1 | AT1G07450 | 55.512 | 254 | 108 | 3 | 12 | 265 | 4 | 252 | 3.54e-94 | 278 |
| MS.gene91570.t1 | AT2G29370 | 55.000 | 260 | 110 | 3 | 8 | 265 | 7 | 261 | 4.46e-93 | 275 |
| MS.gene91570.t1 | AT2G29320 | 56.485 | 239 | 91 | 4 | 32 | 265 | 11 | 241 | 1.06e-86 | 259 |
| MS.gene91570.t1 | AT2G29290 | 53.219 | 233 | 105 | 1 | 33 | 265 | 7 | 235 | 3.14e-85 | 254 |
| MS.gene91570.t1 | AT2G29310 | 53.846 | 234 | 104 | 2 | 32 | 265 | 21 | 250 | 9.37e-82 | 246 |
| MS.gene91570.t1 | AT2G29350 | 55.556 | 225 | 95 | 2 | 41 | 265 | 2 | 221 | 1.08e-81 | 245 |
| MS.gene91570.t1 | AT2G29320 | 59.512 | 205 | 73 | 4 | 11 | 209 | 7 | 207 | 2.80e-78 | 236 |
| MS.gene91570.t1 | AT2G29350 | 57.500 | 200 | 85 | 0 | 10 | 209 | 9 | 208 | 6.02e-78 | 235 |
| MS.gene91570.t1 | AT2G29340 | 55.224 | 201 | 90 | 0 | 11 | 211 | 2 | 202 | 1.56e-76 | 231 |
| MS.gene91570.t1 | AT2G29340 | 55.224 | 201 | 90 | 0 | 11 | 211 | 2 | 202 | 1.56e-76 | 231 |
| MS.gene91570.t1 | AT2G29310 | 56.784 | 199 | 86 | 0 | 11 | 209 | 2 | 200 | 4.96e-76 | 229 |
| MS.gene91570.t1 | AT1G07440 | 55.621 | 169 | 75 | 0 | 10 | 178 | 6 | 174 | 1.10e-63 | 197 |
| MS.gene91570.t1 | AT2G29310 | 53.933 | 178 | 82 | 0 | 32 | 209 | 21 | 198 | 1.34e-61 | 193 |
| MS.gene91570.t1 | AT2G29170 | 65.625 | 96 | 32 | 1 | 8 | 102 | 7 | 102 | 1.45e-40 | 136 |
| MS.gene91570.t1 | AT3G03980 | 32.222 | 270 | 166 | 4 | 7 | 264 | 5 | 269 | 5.79e-34 | 124 |
| MS.gene91570.t1 | AT5G18210 | 31.660 | 259 | 162 | 5 | 15 | 264 | 7 | 259 | 3.97e-31 | 116 |
| MS.gene91570.t1 | AT4G05530 | 33.333 | 252 | 159 | 5 | 16 | 266 | 9 | 252 | 6.79e-31 | 115 |
| MS.gene91570.t1 | AT3G05260 | 35.547 | 256 | 149 | 7 | 16 | 263 | 37 | 284 | 9.96e-30 | 113 |
| MS.gene91570.t1 | AT1G54870 | 33.074 | 257 | 155 | 8 | 16 | 263 | 82 | 330 | 1.32e-28 | 111 |
| MS.gene91570.t1 | AT1G54870 | 33.074 | 257 | 155 | 8 | 16 | 263 | 84 | 332 | 1.37e-28 | 111 |
| MS.gene91570.t1 | AT5G18210 | 32.083 | 240 | 148 | 5 | 15 | 245 | 7 | 240 | 1.25e-27 | 107 |
| MS.gene91570.t1 | AT4G13180 | 32.812 | 256 | 158 | 6 | 16 | 264 | 13 | 261 | 2.41e-27 | 106 |
| MS.gene91570.t1 | AT3G04000 | 31.852 | 270 | 166 | 4 | 7 | 263 | 5 | 269 | 3.69e-24 | 98.6 |
| MS.gene91570.t1 | AT1G24360 | 33.065 | 248 | 149 | 9 | 22 | 263 | 80 | 316 | 7.89e-24 | 98.6 |
| MS.gene91570.t1 | AT3G12800 | 27.099 | 262 | 167 | 5 | 16 | 263 | 10 | 261 | 1.30e-22 | 94.7 |
| MS.gene91570.t1 | AT3G03330 | 29.442 | 197 | 134 | 3 | 12 | 203 | 37 | 233 | 1.89e-18 | 84.0 |
| MS.gene91570.t1 | AT3G55310 | 26.154 | 260 | 175 | 7 | 16 | 265 | 17 | 269 | 4.08e-17 | 79.3 |
| MS.gene91570.t1 | AT3G55290 | 26.616 | 263 | 170 | 8 | 16 | 265 | 17 | 269 | 4.98e-17 | 79.0 |
| MS.gene91570.t1 | AT3G55290 | 26.616 | 263 | 170 | 8 | 16 | 265 | 18 | 270 | 5.09e-17 | 79.0 |
| MS.gene91570.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 19 | 272 | 9.35e-17 | 78.6 |
| MS.gene91570.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 15 | 268 | 1.03e-16 | 78.2 |
| MS.gene91570.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 17 | 270 | 1.10e-16 | 78.2 |
| MS.gene91570.t1 | AT1G63380 | 25.483 | 259 | 179 | 9 | 16 | 265 | 22 | 275 | 1.39e-16 | 78.2 |
| MS.gene91570.t1 | AT3G46170 | 26.415 | 265 | 168 | 9 | 16 | 265 | 26 | 278 | 3.85e-16 | 76.6 |
| MS.gene91570.t1 | AT5G04900 | 29.648 | 199 | 123 | 7 | 22 | 208 | 83 | 276 | 4.99e-16 | 77.0 |
| MS.gene91570.t1 | AT3G42960 | 27.675 | 271 | 168 | 8 | 11 | 266 | 5 | 262 | 2.82e-15 | 74.3 |
| MS.gene91570.t1 | AT1G62610 | 25.385 | 260 | 178 | 9 | 16 | 265 | 15 | 268 | 4.06e-15 | 73.9 |
| MS.gene91570.t1 | AT1G62610 | 25.385 | 260 | 178 | 9 | 16 | 265 | 14 | 267 | 4.13e-15 | 73.6 |
| MS.gene91570.t1 | AT1G62610 | 25.385 | 260 | 178 | 9 | 16 | 265 | 19 | 272 | 4.29e-15 | 73.9 |
| MS.gene91570.t1 | AT1G62610 | 25.385 | 260 | 178 | 9 | 16 | 265 | 13 | 266 | 4.60e-15 | 73.6 |
| MS.gene91570.t1 | AT3G51680 | 28.014 | 282 | 182 | 8 | 1 | 266 | 20 | 296 | 5.50e-15 | 73.6 |
| MS.gene91570.t1 | AT2G17845 | 24.621 | 264 | 173 | 8 | 16 | 263 | 47 | 300 | 4.57e-14 | 71.2 |
| MS.gene91570.t1 | AT1G49670 | 31.081 | 222 | 133 | 9 | 18 | 225 | 6 | 221 | 1.83e-13 | 70.5 |
| MS.gene91570.t1 | AT5G50690 | 29.167 | 192 | 125 | 6 | 16 | 202 | 45 | 230 | 1.88e-13 | 68.6 |
| MS.gene91570.t1 | AT5G50590 | 29.167 | 192 | 125 | 6 | 16 | 202 | 45 | 230 | 1.88e-13 | 68.6 |
| MS.gene91570.t1 | AT3G47350 | 29.016 | 193 | 126 | 6 | 18 | 205 | 46 | 232 | 1.91e-13 | 69.3 |
| MS.gene91570.t1 | AT1G49670 | 31.081 | 222 | 133 | 9 | 18 | 225 | 6 | 221 | 1.93e-13 | 70.5 |
| MS.gene91570.t1 | AT3G47350 | 29.016 | 193 | 126 | 6 | 18 | 205 | 46 | 232 | 1.96e-13 | 69.3 |
| MS.gene91570.t1 | AT3G03350 | 30.636 | 173 | 107 | 4 | 36 | 203 | 188 | 352 | 2.89e-13 | 69.3 |
| MS.gene91570.t1 | AT5G50690 | 30.286 | 175 | 112 | 5 | 16 | 185 | 45 | 214 | 3.32e-13 | 68.6 |
| MS.gene91570.t1 | AT5G50590 | 30.286 | 175 | 112 | 5 | 16 | 185 | 45 | 214 | 3.32e-13 | 68.6 |
| MS.gene91570.t1 | AT3G26760 | 26.217 | 267 | 168 | 8 | 16 | 265 | 36 | 290 | 5.63e-13 | 67.8 |
| MS.gene91570.t1 | AT2G47130 | 28.571 | 259 | 164 | 9 | 16 | 265 | 6 | 252 | 5.89e-13 | 67.4 |
| MS.gene91570.t1 | AT4G13250 | 26.087 | 207 | 132 | 4 | 22 | 208 | 165 | 370 | 1.31e-12 | 67.8 |
| MS.gene91570.t1 | AT3G06060 | 26.923 | 182 | 124 | 3 | 21 | 198 | 42 | 218 | 2.23e-12 | 66.2 |
| MS.gene91570.t1 | AT3G06060 | 26.923 | 182 | 124 | 3 | 21 | 198 | 59 | 235 | 2.72e-12 | 66.2 |
| MS.gene91570.t1 | AT2G47140 | 27.099 | 262 | 165 | 8 | 16 | 265 | 6 | 253 | 9.15e-12 | 63.9 |
| MS.gene91570.t1 | AT4G03140 | 25.769 | 260 | 177 | 7 | 16 | 266 | 78 | 330 | 4.33e-11 | 62.8 |
| MS.gene91570.t1 | AT3G59710 | 34.307 | 137 | 81 | 4 | 13 | 145 | 13 | 144 | 5.71e-11 | 62.0 |
| MS.gene91570.t1 | AT3G59710 | 34.307 | 137 | 81 | 4 | 13 | 145 | 42 | 173 | 7.96e-11 | 62.0 |
Find 50 sgRNAs with CRISPR-Local
Find 104 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTGAAGAGTTAGCTGAATT+TGG | 0.164853 | 7.1:-38559643 | MS.gene91570:CDS |
| CCATTCTAATGCCAAGTTCT+TGG | 0.242739 | 7.1:+38559003 | None:intergenic |
| GTGTTTACTTCTTCCGTTGC+AGG | 0.266264 | 7.1:-38559183 | MS.gene91570:CDS |
| CTTCTAAAGGAATCTGGATA+TGG | 0.270015 | 7.1:-38559213 | MS.gene91570:CDS |
| AGCAAAGGGTTTAATGTAAC+AGG | 0.349868 | 7.1:-38559556 | MS.gene91570:CDS |
| ATTGTTTCTTCTATCTTTCA+AGG | 0.382915 | 7.1:-38559484 | MS.gene91570:CDS |
| AGAAGATATTAATAAATGTT+TGG | 0.384019 | 7.1:-38559590 | MS.gene91570:CDS |
| CACCCACTTCTAAAGGAATC+TGG | 0.397044 | 7.1:-38559219 | MS.gene91570:CDS |
| TTAATAAATGTTTGGAAGAG+TGG | 0.412448 | 7.1:-38559582 | MS.gene91570:CDS |
| AACAAAGTTAAGCAGCTTCA+AGG | 0.417397 | 7.1:-38559890 | MS.gene91570:CDS |
| TGATCAACGCAAGAAACTAA+TGG | 0.419511 | 7.1:-38559509 | MS.gene91570:CDS |
| CCAAGAACTTGGCATTAGAA+TGG | 0.430035 | 7.1:-38559003 | MS.gene91570:CDS |
| TCTGTTTATGCTGCCACTAA+AGG | 0.430275 | 7.1:-38559138 | MS.gene91570:intron |
| CGTGCAAATGCTGTGGCACC+TGG | 0.452656 | 7.1:-38558965 | MS.gene91570:CDS |
| ACAGGTGGAACCCGAGGCAT+TGG | 0.454943 | 7.1:-38559829 | MS.gene91570:CDS |
| GAATCAATTCACCAAGAACT+TGG | 0.462001 | 7.1:-38559014 | MS.gene91570:CDS |
| GCAGCATAAACAGATAAAAC+AGG | 0.469195 | 7.1:+38559147 | None:intergenic |
| GGACAAATAATAGCTATTGA+TGG | 0.472475 | 7.1:-38558082 | MS.gene91570:CDS |
| TCAAACTCCTACAGGTCGTA+TGG | 0.485964 | 7.1:-38558170 | MS.gene91570:CDS |
| GAAGATATATCAACTACATT+GGG | 0.486365 | 7.1:-38559282 | MS.gene91570:CDS |
| TGGAAGAGTGGAAAAGCAAA+GGG | 0.487134 | 7.1:-38559570 | MS.gene91570:CDS |
| AGTGATGTCTTGACAGGTCC+AGG | 0.488001 | 7.1:+38558947 | None:intergenic |
| GTAGTGTCTCAAACTCCTAC+AGG | 0.497877 | 7.1:-38558178 | MS.gene91570:CDS |
| ACTTGCACACCCACTTCTAA+AGG | 0.498917 | 7.1:-38559226 | MS.gene91570:CDS |
| CAAGAACTTGGCATTAGAAT+GGG | 0.500423 | 7.1:-38559002 | MS.gene91570:CDS |
| TGAAGATATATCAACTACAT+TGG | 0.504873 | 7.1:-38559283 | MS.gene91570:CDS |
| CAGGTGGAACCCGAGGCATT+GGG | 0.509603 | 7.1:-38559828 | MS.gene91570:intron |
| TTCTAAAGGAATCTGGATAT+GGG | 0.510619 | 7.1:-38559212 | MS.gene91570:CDS |
| TTACAGGATTATGACTCTGA+AGG | 0.523876 | 7.1:-38558220 | MS.gene91570:intron |
| TGCAAAAGTGATGTCTTGAC+AGG | 0.527140 | 7.1:+38558941 | None:intergenic |
| AGGAAAATACCCAATGCCTC+GGG | 0.536044 | 7.1:+38559819 | None:intergenic |
| AAGGAAAATACCCAATGCCT+CGG | 0.541189 | 7.1:+38559818 | None:intergenic |
| TATCCAGATTCCTTTAGAAG+TGG | 0.549645 | 7.1:+38559216 | None:intergenic |
| ATCCAGATTCCTTTAGAAGT+GGG | 0.552090 | 7.1:+38559217 | None:intergenic |
| GAAGGGTATAAAGCTATAGC+TGG | 0.552123 | 7.1:-38558202 | MS.gene91570:CDS |
| CCAGTGATGTGTGATGCAGC+TGG | 0.556867 | 7.1:+38558103 | None:intergenic |
| CCAGCTGCATCACACATCAC+TGG | 0.560488 | 7.1:-38558103 | MS.gene91570:CDS |
| GCAGCTTCAAGGATAAAAGA+TGG | 0.570695 | 7.1:-38559879 | MS.gene91570:CDS |
| TTGGAAGAGTGGAAAAGCAA+AGG | 0.577726 | 7.1:-38559571 | MS.gene91570:CDS |
| TACAGGATTATGACTCTGAA+GGG | 0.581397 | 7.1:-38558219 | MS.gene91570:intron |
| GATAAAAGATGGTCACTACA+TGG | 0.585575 | 7.1:-38559868 | MS.gene91570:CDS |
| CAAACTCCTACAGGTCGTAT+GGG | 0.597780 | 7.1:-38558169 | MS.gene91570:CDS |
| GGTATGACTGCGTTAGTGAC+AGG | 0.615872 | 7.1:-38559847 | MS.gene91570:CDS |
| CTTGGCATTAGAATGGGCAA+AGG | 0.624391 | 7.1:-38558996 | MS.gene91570:CDS |
| CAAATAATAGCTATTGATGG+AGG | 0.647210 | 7.1:-38558079 | MS.gene91570:CDS |
| GGTGTGCAAGTTGACACAAA+TGG | 0.648867 | 7.1:+38559238 | None:intergenic |
| TAATATTCGTGCAAATGCTG+TGG | 0.649939 | 7.1:-38558972 | MS.gene91570:CDS |
| GTCTCTCCCATACGACCTGT+AGG | 0.653589 | 7.1:+38558163 | None:intergenic |
| TTAGTGACAGGTGGAACCCG+AGG | 0.654837 | 7.1:-38559835 | MS.gene91570:CDS |
| ATGACTGCGTTAGTGACAGG+TGG | 0.701550 | 7.1:-38559844 | MS.gene91570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTAAATAAAAAATATAAA+TGG | + | chr7.1:38558529-38558548 | None:intergenic | 0.0% |
| !!! | AAAATATTACACTTTTTTTT+AGG | - | chr7.1:38559400-38559419 | MS.gene91570:intron | 10.0% |
| !!! | ATAATTTTTTTTACAAAGAA+AGG | - | chr7.1:38559526-38559545 | MS.gene91570:CDS | 10.0% |
| !!! | ATATAAAGTTGTTTTTTTAA+AGG | + | chr7.1:38558251-38558270 | None:intergenic | 10.0% |
| !!! | TTTTCAAAAATAGATTTAAA+AGG | + | chr7.1:38558219-38558238 | None:intergenic | 10.0% |
| !! | AAAGAATTACAATTCATTAT+AGG | - | chr7.1:38559670-38559689 | MS.gene91570:intron | 15.0% |
| !! | AGAAGATATTAATAAATGTT+TGG | - | chr7.1:38558374-38558393 | MS.gene91570:intron | 15.0% |
| !!! | AAAATTATATACATGTTTTG+AGG | + | chr7.1:38558567-38558586 | None:intergenic | 15.0% |
| !!! | ACTTCTAAAAAATTGTTTAT+TGG | - | chr7.1:38559345-38559364 | MS.gene91570:intron | 15.0% |
| !!! | ATATAATGTTACCTTATTTT+AGG | - | chr7.1:38558609-38558628 | MS.gene91570:intron | 15.0% |
| !!! | ATCAAATTATTGTTTTACAT+AGG | + | chr7.1:38558919-38558938 | None:intergenic | 15.0% |
| !!! | ATTTTTTATTTAGCATAGAA+AGG | - | chr7.1:38559498-38559517 | MS.gene91570:CDS | 15.0% |
| !!! | TCAAATTCATTTTATTAAAG+AGG | + | chr7.1:38558864-38558883 | None:intergenic | 15.0% |
| !!! | TTTTGTTATCAATTAATCTT+AGG | - | chr7.1:38559095-38559114 | MS.gene91570:intron | 15.0% |
| !! | AAGAAAGGATAATTATTGAA+AGG | - | chr7.1:38559541-38559560 | MS.gene91570:CDS | 20.0% |
| !! | GTAAAACAATAATTTGATTC+AGG | - | chr7.1:38558921-38558940 | MS.gene91570:intron | 20.0% |
| !! | TGTTCATGTAATAATCTTTA+GGG | - | chr7.1:38559065-38559084 | MS.gene91570:intron | 20.0% |
| !! | TTGTTCATGTAATAATCTTT+AGG | - | chr7.1:38559064-38559083 | MS.gene91570:intron | 20.0% |
| !!! | AATTCATTTTATTAAAGAGG+AGG | + | chr7.1:38558861-38558880 | None:intergenic | 20.0% |
| !!! | AATTTAGCGACTTTTAAATA+TGG | + | chr7.1:38559481-38559500 | None:intergenic | 20.0% |
| !!! | TAATGCATTAAATGTTTTCT+CGG | + | chr7.1:38559178-38559197 | None:intergenic | 20.0% |
| ! | AACATGATCCATTAATCTTT+AGG | - | chr7.1:38559307-38559326 | MS.gene91570:CDS | 25.0% |
| ! | ACATGATCCATTAATCTTTA+GGG | - | chr7.1:38559308-38559327 | MS.gene91570:CDS | 25.0% |
| ! | AGCATTGTTTACCTAAAATA+AGG | + | chr7.1:38558623-38558642 | None:intergenic | 25.0% |
| ! | CTTAAATAATGACCCAAAAA+GGG | + | chr7.1:38559228-38559247 | None:intergenic | 25.0% |
| ! | GAAGATATATCAACTACATT+GGG | - | chr7.1:38558682-38558701 | MS.gene91570:intron | 25.0% |
| ! | TGAAGATATATCAACTACAT+TGG | - | chr7.1:38558681-38558700 | MS.gene91570:intron | 25.0% |
| ! | TTAATAAATGTTTGGAAGAG+TGG | - | chr7.1:38558382-38558401 | MS.gene91570:intron | 25.0% |
| ! | TTCCTTATCTTAACTCTTAA+TGG | - | chr7.1:38558163-38558182 | MS.gene91570:CDS | 25.0% |
| !! | AATGCAAATATTACCCTTTT+TGG | - | chr7.1:38559212-38559231 | MS.gene91570:CDS | 25.0% |
| !! | ATGCAAATATTACCCTTTTT+GGG | - | chr7.1:38559213-38559232 | MS.gene91570:CDS | 25.0% |
| !! | ATTGTTTCTTCTATCTTTCA+AGG | - | chr7.1:38558480-38558499 | MS.gene91570:intron | 25.0% |
| !! | GTTATCTACTATTTTCTTCA+TGG | + | chr7.1:38558656-38558675 | None:intergenic | 25.0% |
| !!! | ACTATTACTACTTTTAGTAG+TGG | + | chr7.1:38559435-38559454 | None:intergenic | 25.0% |
| ACAATAATTTGATTCAGGAG+CGG | - | chr7.1:38558926-38558945 | MS.gene91570:intron | 30.0% | |
| CAAATAATAGCTATTGATGG+AGG | - | chr7.1:38559885-38559904 | MS.gene91570:CDS | 30.0% | |
| CTCTTAATGGCAAAATTAGA+AGG | - | chr7.1:38558176-38558195 | MS.gene91570:CDS | 30.0% | |
| GCTTAAATAATGACCCAAAA+AGG | + | chr7.1:38559229-38559248 | None:intergenic | 30.0% | |
| GGACAAATAATAGCTATTGA+TGG | - | chr7.1:38559882-38559901 | MS.gene91570:CDS | 30.0% | |
| TGCCATTAAGAGTTAAGATA+AGG | + | chr7.1:38558168-38558187 | None:intergenic | 30.0% | |
| ! | AATAGCTTTTAAACCTGCAA+CGG | + | chr7.1:38558797-38558816 | None:intergenic | 30.0% |
| ! | ATGTTTATACTGCTTGTTAC+AGG | - | chr7.1:38559728-38559747 | MS.gene91570:intron | 30.0% |
| ! | TATTTTCTTCATGGTAGGTT+TGG | + | chr7.1:38558647-38558666 | None:intergenic | 30.0% |
| ! | TCTACTATTTTCTTCATGGT+AGG | + | chr7.1:38558652-38558671 | None:intergenic | 30.0% |
| ! | TTCTAAAGGAATCTGGATAT+GGG | - | chr7.1:38558752-38558771 | MS.gene91570:intron | 30.0% |
| !! | ATCACTTTTGCATTCTATCA+CGG | - | chr7.1:38559034-38559053 | MS.gene91570:intron | 30.0% |
| AACAAAGTTAAGCAGCTTCA+AGG | - | chr7.1:38558074-38558093 | MS.gene91570:CDS | 35.0% | |
| AGCAAAGGGTTTAATGTAAC+AGG | - | chr7.1:38558408-38558427 | MS.gene91570:intron | 35.0% | |
| CAAGAACTTGGCATTAGAAT+GGG | - | chr7.1:38558962-38558981 | MS.gene91570:CDS | 35.0% | |
| GAATCAATTCACCAAGAACT+TGG | - | chr7.1:38558950-38558969 | MS.gene91570:CDS | 35.0% | |
| GAGGAAAAACATACCTTTAG+TGG | + | chr7.1:38558842-38558861 | None:intergenic | 35.0% | |
| GATAAAAGATGGTCACTACA+TGG | - | chr7.1:38558096-38558115 | MS.gene91570:CDS | 35.0% | |
| GCAGCATAAACAGATAAAAC+AGG | + | chr7.1:38558820-38558839 | None:intergenic | 35.0% | |
| GTTGAAGAGTTAGCTGAATT+TGG | - | chr7.1:38558321-38558340 | MS.gene91570:intron | 35.0% | |
| TAATATTCGTGCAAATGCTG+TGG | - | chr7.1:38558992-38559011 | MS.gene91570:CDS | 35.0% | |
| TACAGGATTATGACTCTGAA+GGG | - | chr7.1:38559745-38559764 | MS.gene91570:intron | 35.0% | |
| TGATCAACGCAAGAAACTAA+TGG | - | chr7.1:38558455-38558474 | MS.gene91570:intron | 35.0% | |
| TGATGCACCCTAAAGATTAA+TGG | + | chr7.1:38559318-38559337 | None:intergenic | 35.0% | |
| TTACAGGATTATGACTCTGA+AGG | - | chr7.1:38559744-38559763 | MS.gene91570:intron | 35.0% | |
| ! | ATCCAGATTCCTTTAGAAGT+GGG | + | chr7.1:38558750-38558769 | None:intergenic | 35.0% |
| ! | CTTCTAAAGGAATCTGGATA+TGG | - | chr7.1:38558751-38558770 | MS.gene91570:intron | 35.0% |
| ! | TATCCAGATTCCTTTAGAAG+TGG | + | chr7.1:38558751-38558770 | None:intergenic | 35.0% |
| ! | TTGGGAACAAATTTTGTGTC+TGG | - | chr7.1:38558700-38558719 | MS.gene91570:intron | 35.0% |
| !!! | TACATGTTTTGAGGACTTAG+AGG | + | chr7.1:38558558-38558577 | None:intergenic | 35.0% |
| AAGGAAAATACCCAATGCCT+CGG | + | chr7.1:38558149-38558168 | None:intergenic | 40.0% | |
| CCAAGAACTTGGCATTAGAA+TGG | - | chr7.1:38558961-38558980 | MS.gene91570:CDS | 40.0% | |
| CCATTCTAATGCCAAGTTCT+TGG | + | chr7.1:38558964-38558983 | None:intergenic | 40.0% | |
| GCAGCTTCAAGGATAAAAGA+TGG | - | chr7.1:38558085-38558104 | MS.gene91570:CDS | 40.0% | |
| TCATGTTAACCAATGCTTCC+AGG | + | chr7.1:38559294-38559313 | None:intergenic | 40.0% | |
| TCTGTTTATGCTGCCACTAA+AGG | - | chr7.1:38558826-38558845 | MS.gene91570:intron | 40.0% | |
| TGACTTCCTTAACCATTGTC+CGG | + | chr7.1:38559138-38559157 | None:intergenic | 40.0% | |
| TGCAAAAGTGATGTCTTGAC+AGG | + | chr7.1:38559026-38559045 | None:intergenic | 40.0% | |
| TGGAAGAGTGGAAAAGCAAA+GGG | - | chr7.1:38558394-38558413 | MS.gene91570:intron | 40.0% | |
| TTGGAAGAGTGGAAAAGCAA+AGG | - | chr7.1:38558393-38558412 | MS.gene91570:intron | 40.0% | |
| ! | GAAGGGTATAAAGCTATAGC+TGG | - | chr7.1:38559762-38559781 | MS.gene91570:intron | 40.0% |
| ACTTCCTTAACCATTGTCCG+GGG | + | chr7.1:38559136-38559155 | None:intergenic | 45.0% | |
| ACTTGCACACCCACTTCTAA+AGG | - | chr7.1:38558738-38558757 | MS.gene91570:intron | 45.0% | |
| AGGAAAATACCCAATGCCTC+GGG | + | chr7.1:38558148-38558167 | None:intergenic | 45.0% | |
| CAAACTCCTACAGGTCGTAT+GGG | - | chr7.1:38559795-38559814 | MS.gene91570:intron | 45.0% | |
| CTTGGCATTAGAATGGGCAA+AGG | - | chr7.1:38558968-38558987 | MS.gene91570:CDS | 45.0% | |
| GACTTCCTTAACCATTGTCC+GGG | + | chr7.1:38559137-38559156 | None:intergenic | 45.0% | |
| GTAGTGTCTCAAACTCCTAC+AGG | - | chr7.1:38559786-38559805 | MS.gene91570:intron | 45.0% | |
| GTGTTTACTTCTTCCGTTGC+AGG | - | chr7.1:38558781-38558800 | MS.gene91570:intron | 45.0% | |
| TCAAACTCCTACAGGTCGTA+TGG | - | chr7.1:38559794-38559813 | MS.gene91570:intron | 45.0% | |
| TGACTTCTTAACCAGTGTCC+TGG | - | chr7.1:38559273-38559292 | MS.gene91570:CDS | 45.0% | |
| ! | CACCCACTTCTAAAGGAATC+TGG | - | chr7.1:38558745-38558764 | MS.gene91570:intron | 45.0% |
| ! | GGTGTGCAAGTTGACACAAA+TGG | + | chr7.1:38558729-38558748 | None:intergenic | 45.0% |
| !!! | TATTTTTATATTTTTAAACT+AGG | - | chr7.1:38558289-38558308 | MS.gene91570:intron | 5.0% |
| AACCAATGCTTCCAGGACAC+TGG | + | chr7.1:38559287-38559306 | None:intergenic | 50.0% | |
| AGTGATGTCTTGACAGGTCC+AGG | + | chr7.1:38559020-38559039 | None:intergenic | 50.0% | |
| ATGACTGCGTTAGTGACAGG+TGG | - | chr7.1:38558120-38558139 | MS.gene91570:CDS | 50.0% | |
| GGTATGACTGCGTTAGTGAC+AGG | - | chr7.1:38558117-38558136 | MS.gene91570:CDS | 50.0% | |
| ! | AACCAGTGTCCTGGAAGCAT+TGG | - | chr7.1:38559282-38559301 | MS.gene91570:CDS | 50.0% |
| AGCACCCCGGACAATGGTTA+AGG | - | chr7.1:38559129-38559148 | MS.gene91570:intron | 55.0% | |
| CCAGCTGCATCACACATCAC+TGG | - | chr7.1:38559861-38559880 | MS.gene91570:CDS | 55.0% | |
| CCAGTGATGTGTGATGCAGC+TGG | + | chr7.1:38559864-38559883 | None:intergenic | 55.0% | |
| GGTAATGCTAACCAGCACCC+CGG | - | chr7.1:38559116-38559135 | MS.gene91570:intron | 55.0% | |
| GTCTCTCCCATACGACCTGT+AGG | + | chr7.1:38559804-38559823 | None:intergenic | 55.0% | |
| TTAACCATTGTCCGGGGTGC+TGG | + | chr7.1:38559130-38559149 | None:intergenic | 55.0% | |
| TTAGTGACAGGTGGAACCCG+AGG | - | chr7.1:38558129-38558148 | MS.gene91570:CDS | 55.0% | |
| ACAGGTGGAACCCGAGGCAT+TGG | - | chr7.1:38558135-38558154 | MS.gene91570:CDS | 60.0% | |
| CGTGCAAATGCTGTGGCACC+TGG | - | chr7.1:38558999-38559018 | MS.gene91570:CDS | 60.0% | |
| CTAACCAGCACCCCGGACAA+TGG | - | chr7.1:38559123-38559142 | MS.gene91570:intron | 60.0% | |
| ! | CAGGTGGAACCCGAGGCATT+GGG | - | chr7.1:38558136-38558155 | MS.gene91570:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 38558066 | 38559920 | 38558066 | ID=MS.gene91570 |
| chr7.1 | mRNA | 38558066 | 38559920 | 38558066 | ID=MS.gene91570.t1;Parent=MS.gene91570 |
| chr7.1 | exon | 38559829 | 38559920 | 38559829 | ID=MS.gene91570.t1.exon1;Parent=MS.gene91570.t1 |
| chr7.1 | CDS | 38559829 | 38559920 | 38559829 | ID=cds.MS.gene91570.t1;Parent=MS.gene91570.t1 |
| chr7.1 | exon | 38559468 | 38559675 | 38559468 | ID=MS.gene91570.t1.exon2;Parent=MS.gene91570.t1 |
| chr7.1 | CDS | 38559468 | 38559675 | 38559468 | ID=cds.MS.gene91570.t1;Parent=MS.gene91570.t1 |
| chr7.1 | exon | 38559139 | 38559355 | 38559139 | ID=MS.gene91570.t1.exon3;Parent=MS.gene91570.t1 |
| chr7.1 | CDS | 38559139 | 38559355 | 38559139 | ID=cds.MS.gene91570.t1;Parent=MS.gene91570.t1 |
| chr7.1 | exon | 38558931 | 38559043 | 38558931 | ID=MS.gene91570.t1.exon4;Parent=MS.gene91570.t1 |
| chr7.1 | CDS | 38558931 | 38559043 | 38558931 | ID=cds.MS.gene91570.t1;Parent=MS.gene91570.t1 |
| chr7.1 | exon | 38558066 | 38558236 | 38558066 | ID=MS.gene91570.t1.exon5;Parent=MS.gene91570.t1 |
| chr7.1 | CDS | 38558066 | 38558236 | 38558066 | ID=cds.MS.gene91570.t1;Parent=MS.gene91570.t1 |
| Gene Sequence |
| Protein sequence |
