Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91576.t1 | XP_013448955.1 | 91.4 | 266 | 23 | 0 | 1 | 266 | 1 | 266 | 5.00E-136 | 493.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91576.t1 | P50162 | 57.5 | 268 | 111 | 1 | 1 | 265 | 1 | 268 | 1.2e-85 | 317.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91576.t1 | A0A072U041 | 91.4 | 266 | 23 | 0 | 1 | 266 | 1 | 266 | 3.6e-136 | 493.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049137 | MS.gene91576 | 0.84859 | 5.56E-60 | -1.69E-46 |
| MS.gene049171 | MS.gene91576 | 0.803747 | 3.01E-49 | -1.69E-46 |
| MS.gene049427 | MS.gene91576 | 0.847568 | 1.06E-59 | -1.69E-46 |
| MS.gene049609 | MS.gene91576 | 0.867161 | 1.68E-65 | -1.69E-46 |
| MS.gene049661 | MS.gene91576 | 0.802729 | 4.89E-49 | -1.69E-46 |
| MS.gene049805 | MS.gene91576 | 0.856587 | 2.91E-62 | -1.69E-46 |
| MS.gene050397 | MS.gene91576 | 0.84061 | 7.84E-58 | -1.69E-46 |
| MS.gene050400 | MS.gene91576 | 0.832173 | 1.10E-55 | -1.69E-46 |
| MS.gene050432 | MS.gene91576 | 0.838611 | 2.59E-57 | -1.69E-46 |
| MS.gene050464 | MS.gene91576 | 0.80395 | 2.73E-49 | -1.69E-46 |
| MS.gene050529 | MS.gene91576 | 0.80931 | 2.02E-50 | -1.69E-46 |
| MS.gene050538 | MS.gene91576 | 0.802496 | 5.46E-49 | -1.69E-46 |
| MS.gene050593 | MS.gene91576 | 0.894694 | 1.94E-75 | -1.69E-46 |
| MS.gene050670 | MS.gene91576 | 0.872317 | 3.49E-67 | -1.69E-46 |
| MS.gene050747 | MS.gene91576 | 0.829013 | 6.53E-55 | -1.69E-46 |
| MS.gene050772 | MS.gene91576 | 0.851581 | 8.08E-61 | -1.69E-46 |
| MS.gene050812 | MS.gene91576 | 0.800254 | 1.57E-48 | -1.69E-46 |
| MS.gene05081 | MS.gene91576 | 0.827108 | 1.88E-54 | -1.69E-46 |
| MS.gene050950 | MS.gene91576 | 0.82727 | 1.72E-54 | -1.69E-46 |
| MS.gene05101 | MS.gene91576 | 0.811963 | 5.38E-51 | -1.69E-46 |
| MS.gene05105 | MS.gene91576 | 0.859901 | 3.00E-63 | -1.69E-46 |
| MS.gene051387 | MS.gene91576 | 0.864256 | 1.39E-64 | -1.69E-46 |
| MS.gene051525 | MS.gene91576 | 0.854207 | 1.44E-61 | -1.69E-46 |
| MS.gene051582 | MS.gene91576 | 0.853813 | 1.86E-61 | -1.69E-46 |
| MS.gene051666 | MS.gene91576 | 0.862761 | 4.03E-64 | -1.69E-46 |
| MS.gene051692 | MS.gene91576 | 0.855877 | 4.70E-62 | -1.69E-46 |
| MS.gene051838 | MS.gene91576 | 0.830306 | 3.16E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene91576 | 0.815574 | 8.62E-52 | -1.69E-46 |
| MS.gene052134 | MS.gene91576 | 0.811114 | 8.23E-51 | -1.69E-46 |
| MS.gene052135 | MS.gene91576 | 0.814012 | 1.91E-51 | -1.69E-46 |
| MS.gene052136 | MS.gene91576 | 0.807532 | 4.83E-50 | -1.69E-46 |
| MS.gene052188 | MS.gene91576 | 0.801542 | 8.57E-49 | -1.69E-46 |
| MS.gene052253 | MS.gene91576 | 0.814806 | 1.28E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene91576 | 0.849746 | 2.65E-60 | -1.69E-46 |
| MS.gene052322 | MS.gene91576 | 0.865683 | 4.94E-65 | -1.69E-46 |
| MS.gene052340 | MS.gene91576 | 0.826737 | 2.30E-54 | -1.69E-46 |
| MS.gene052346 | MS.gene91576 | 0.828891 | 6.99E-55 | -1.69E-46 |
| MS.gene052414 | MS.gene91576 | 0.841221 | 5.42E-58 | -1.69E-46 |
| MS.gene052421 | MS.gene91576 | 0.837357 | 5.45E-57 | -1.69E-46 |
| MS.gene052481 | MS.gene91576 | 0.889765 | 1.81E-73 | -1.69E-46 |
| MS.gene052484 | MS.gene91576 | 0.855062 | 8.12E-62 | -1.69E-46 |
| MS.gene052485 | MS.gene91576 | 0.851206 | 1.03E-60 | -1.69E-46 |
| MS.gene052501 | MS.gene91576 | 0.861457 | 1.01E-63 | -1.69E-46 |
| MS.gene052503 | MS.gene91576 | 0.823464 | 1.37E-53 | -1.69E-46 |
| MS.gene052505 | MS.gene91576 | 0.853787 | 1.90E-61 | -1.69E-46 |
| MS.gene052506 | MS.gene91576 | 0.802347 | 5.86E-49 | -1.69E-46 |
| MS.gene052615 | MS.gene91576 | 0.825729 | 4.00E-54 | -1.69E-46 |
| MS.gene052820 | MS.gene91576 | 0.804832 | 1.79E-49 | -1.69E-46 |
| MS.gene052822 | MS.gene91576 | 0.800241 | 1.58E-48 | -1.69E-46 |
| MS.gene052823 | MS.gene91576 | 0.811128 | 8.17E-51 | -1.69E-46 |
| MS.gene052825 | MS.gene91576 | 0.811793 | 5.86E-51 | -1.69E-46 |
| MS.gene052982 | MS.gene91576 | 0.848472 | 6.00E-60 | -1.69E-46 |
| MS.gene053103 | MS.gene91576 | 0.822492 | 2.30E-53 | -1.69E-46 |
| MS.gene053104 | MS.gene91576 | 0.838176 | 3.36E-57 | -1.69E-46 |
| MS.gene053107 | MS.gene91576 | 0.836021 | 1.19E-56 | -1.69E-46 |
| MS.gene053207 | MS.gene91576 | 0.854018 | 1.63E-61 | -1.69E-46 |
| MS.gene053209 | MS.gene91576 | 0.829515 | 4.93E-55 | -1.69E-46 |
| MS.gene053213 | MS.gene91576 | 0.841568 | 4.39E-58 | -1.69E-46 |
| MS.gene053286 | MS.gene91576 | 0.828713 | 7.72E-55 | -1.69E-46 |
| MS.gene053322 | MS.gene91576 | 0.817619 | 3.00E-52 | -1.69E-46 |
| MS.gene053436 | MS.gene91576 | 0.816027 | 6.83E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene91576 | 0.8364 | 9.57E-57 | -1.69E-46 |
| MS.gene053574 | MS.gene91576 | 0.831115 | 2.00E-55 | -1.69E-46 |
| MS.gene054600 | MS.gene91576 | 0.820648 | 6.14E-53 | -1.69E-46 |
| MS.gene054642 | MS.gene91576 | 0.80343 | 3.50E-49 | -1.69E-46 |
| MS.gene054884 | MS.gene91576 | -0.804929 | 1.71E-49 | -1.69E-46 |
| MS.gene054927 | MS.gene91576 | 0.835142 | 1.99E-56 | -1.69E-46 |
| MS.gene05505 | MS.gene91576 | 0.816442 | 5.52E-52 | -1.69E-46 |
| MS.gene055116 | MS.gene91576 | 0.866696 | 2.36E-65 | -1.69E-46 |
| MS.gene055206 | MS.gene91576 | 0.868223 | 7.66E-66 | -1.69E-46 |
| MS.gene055277 | MS.gene91576 | 0.815885 | 7.35E-52 | -1.69E-46 |
| MS.gene055289 | MS.gene91576 | 0.847215 | 1.33E-59 | -1.69E-46 |
| MS.gene055369 | MS.gene91576 | 0.800393 | 1.47E-48 | -1.69E-46 |
| MS.gene055539 | MS.gene91576 | 0.801827 | 7.49E-49 | -1.69E-46 |
| MS.gene05553 | MS.gene91576 | 0.832543 | 8.90E-56 | -1.69E-46 |
| MS.gene055564 | MS.gene91576 | 0.814597 | 1.42E-51 | -1.69E-46 |
| MS.gene055647 | MS.gene91576 | 0.828439 | 8.98E-55 | -1.69E-46 |
| MS.gene055722 | MS.gene91576 | 0.838523 | 2.73E-57 | -1.69E-46 |
| MS.gene05592 | MS.gene91576 | 0.831537 | 1.58E-55 | -1.69E-46 |
| MS.gene055941 | MS.gene91576 | 0.805314 | 1.42E-49 | -1.69E-46 |
| MS.gene056191 | MS.gene91576 | 0.83029 | 3.19E-55 | -1.69E-46 |
| MS.gene056374 | MS.gene91576 | 0.838148 | 3.42E-57 | -1.69E-46 |
| MS.gene056407 | MS.gene91576 | 0.849629 | 2.86E-60 | -1.69E-46 |
| MS.gene056410 | MS.gene91576 | 0.825063 | 5.75E-54 | -1.69E-46 |
| MS.gene056511 | MS.gene91576 | 0.861341 | 1.10E-63 | -1.69E-46 |
| MS.gene05664 | MS.gene91576 | 0.809486 | 1.85E-50 | -1.69E-46 |
| MS.gene05666 | MS.gene91576 | 0.800003 | 1.77E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene91576 | 0.839515 | 1.51E-57 | -1.69E-46 |
| MS.gene056877 | MS.gene91576 | 0.865556 | 5.42E-65 | -1.69E-46 |
| MS.gene056897 | MS.gene91576 | 0.800274 | 1.56E-48 | -1.69E-46 |
| MS.gene057011 | MS.gene91576 | 0.825119 | 5.58E-54 | -1.69E-46 |
| MS.gene05702 | MS.gene91576 | 0.815302 | 9.91E-52 | -1.69E-46 |
| MS.gene057124 | MS.gene91576 | 0.852235 | 5.27E-61 | -1.69E-46 |
| MS.gene057129 | MS.gene91576 | 0.805556 | 1.26E-49 | -1.69E-46 |
| MS.gene057146 | MS.gene91576 | 0.822511 | 2.28E-53 | -1.69E-46 |
| MS.gene057196 | MS.gene91576 | 0.872416 | 3.24E-67 | -1.69E-46 |
| MS.gene057331 | MS.gene91576 | 0.878782 | 2.13E-69 | -1.69E-46 |
| MS.gene057332 | MS.gene91576 | 0.852277 | 5.13E-61 | -1.69E-46 |
| MS.gene057416 | MS.gene91576 | 0.868534 | 6.08E-66 | -1.69E-46 |
| MS.gene057658 | MS.gene91576 | 0.824003 | 1.02E-53 | -1.69E-46 |
| MS.gene057734 | MS.gene91576 | 0.810091 | 1.37E-50 | -1.69E-46 |
| MS.gene057749 | MS.gene91576 | 0.837141 | 6.19E-57 | -1.69E-46 |
| MS.gene057823 | MS.gene91576 | 0.83321 | 6.08E-56 | -1.69E-46 |
| MS.gene057856 | MS.gene91576 | 0.840444 | 8.66E-58 | -1.69E-46 |
| MS.gene058002 | MS.gene91576 | 0.812839 | 3.46E-51 | -1.69E-46 |
| MS.gene058006 | MS.gene91576 | 0.835321 | 1.80E-56 | -1.69E-46 |
| MS.gene058019 | MS.gene91576 | 0.87405 | 9.14E-68 | -1.69E-46 |
| MS.gene058233 | MS.gene91576 | 0.827932 | 1.19E-54 | -1.69E-46 |
| MS.gene058293 | MS.gene91576 | 0.80644 | 8.22E-50 | -1.69E-46 |
| MS.gene058376 | MS.gene91576 | 0.83272 | 8.05E-56 | -1.69E-46 |
| MS.gene058419 | MS.gene91576 | 0.820222 | 7.69E-53 | -1.69E-46 |
| MS.gene058444 | MS.gene91576 | 0.843281 | 1.54E-58 | -1.69E-46 |
| MS.gene058544 | MS.gene91576 | 0.818881 | 1.55E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene91576 | 0.828215 | 1.02E-54 | -1.69E-46 |
| MS.gene058700 | MS.gene91576 | 0.831466 | 1.64E-55 | -1.69E-46 |
| MS.gene058838 | MS.gene91576 | 0.843194 | 1.63E-58 | -1.69E-46 |
| MS.gene05883 | MS.gene91576 | 0.828486 | 8.75E-55 | -1.69E-46 |
| MS.gene058928 | MS.gene91576 | 0.806381 | 8.46E-50 | -1.69E-46 |
| MS.gene058995 | MS.gene91576 | 0.808365 | 3.21E-50 | -1.69E-46 |
| MS.gene059023 | MS.gene91576 | 0.807773 | 4.29E-50 | -1.69E-46 |
| MS.gene05907 | MS.gene91576 | 0.829918 | 3.93E-55 | -1.69E-46 |
| MS.gene059141 | MS.gene91576 | 0.838304 | 3.11E-57 | -1.69E-46 |
| MS.gene05934 | MS.gene91576 | 0.833921 | 4.04E-56 | -1.69E-46 |
| MS.gene059420 | MS.gene91576 | 0.817455 | 3.27E-52 | -1.69E-46 |
| MS.gene059455 | MS.gene91576 | 0.84448 | 7.37E-59 | -1.69E-46 |
| MS.gene059536 | MS.gene91576 | 0.844414 | 7.67E-59 | -1.69E-46 |
| MS.gene059676 | MS.gene91576 | 0.834135 | 3.57E-56 | -1.69E-46 |
| MS.gene059688 | MS.gene91576 | 0.859826 | 3.16E-63 | -1.69E-46 |
| MS.gene059692 | MS.gene91576 | 0.849251 | 3.65E-60 | -1.69E-46 |
| MS.gene059695 | MS.gene91576 | 0.851203 | 1.03E-60 | -1.69E-46 |
| MS.gene059718 | MS.gene91576 | 0.800589 | 1.34E-48 | -1.69E-46 |
| MS.gene059902 | MS.gene91576 | 0.814231 | 1.71E-51 | -1.69E-46 |
| MS.gene059960 | MS.gene91576 | 0.819273 | 1.27E-52 | -1.69E-46 |
| MS.gene060193 | MS.gene91576 | 0.837412 | 5.28E-57 | -1.69E-46 |
| MS.gene060403 | MS.gene91576 | 0.914644 | 1.50E-84 | -1.69E-46 |
| MS.gene060469 | MS.gene91576 | 0.810172 | 1.32E-50 | -1.69E-46 |
| MS.gene060804 | MS.gene91576 | 0.874321 | 7.40E-68 | -1.69E-46 |
| MS.gene060818 | MS.gene91576 | 0.807948 | 3.94E-50 | -1.69E-46 |
| MS.gene060835 | MS.gene91576 | 0.866582 | 2.57E-65 | -1.69E-46 |
| MS.gene060837 | MS.gene91576 | 0.840649 | 7.66E-58 | -1.69E-46 |
| MS.gene06092 | MS.gene91576 | 0.852433 | 4.63E-61 | -1.69E-46 |
| MS.gene060986 | MS.gene91576 | 0.808615 | 2.84E-50 | -1.69E-46 |
| MS.gene061049 | MS.gene91576 | 0.802257 | 6.11E-49 | -1.69E-46 |
| MS.gene061051 | MS.gene91576 | -0.803383 | 3.58E-49 | -1.69E-46 |
| MS.gene061150 | MS.gene91576 | 0.806063 | 9.87E-50 | -1.69E-46 |
| MS.gene061154 | MS.gene91576 | 0.841208 | 5.46E-58 | -1.69E-46 |
| MS.gene061200 | MS.gene91576 | 0.815761 | 7.83E-52 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91576.t1 | MTR_7g063390 | 91.353 | 266 | 23 | 0 | 1 | 266 | 1 | 266 | 0.0 | 508 |
| MS.gene91576.t1 | MTR_7g063360 | 88.346 | 266 | 31 | 0 | 1 | 266 | 1 | 266 | 9.30e-177 | 487 |
| MS.gene91576.t1 | MTR_7g063260 | 78.113 | 265 | 58 | 0 | 1 | 265 | 1 | 265 | 1.32e-155 | 434 |
| MS.gene91576.t1 | MTR_7g063270 | 75.849 | 265 | 63 | 1 | 1 | 265 | 1 | 264 | 6.62e-152 | 424 |
| MS.gene91576.t1 | MTR_7g063330 | 75.472 | 265 | 63 | 2 | 1 | 265 | 1 | 263 | 4.05e-147 | 412 |
| MS.gene91576.t1 | MTR_7g063320 | 74.436 | 266 | 67 | 1 | 1 | 266 | 1 | 265 | 3.64e-142 | 400 |
| MS.gene91576.t1 | MTR_7g063270 | 61.887 | 265 | 51 | 3 | 1 | 265 | 1 | 215 | 4.99e-111 | 319 |
| MS.gene91576.t1 | MTR_3g068070 | 59.091 | 264 | 104 | 1 | 3 | 266 | 2 | 261 | 2.04e-108 | 314 |
| MS.gene91576.t1 | MTR_4g064883 | 57.422 | 256 | 105 | 1 | 11 | 266 | 9 | 260 | 1.19e-105 | 307 |
| MS.gene91576.t1 | MTR_3g068155 | 57.692 | 260 | 106 | 1 | 7 | 266 | 10 | 265 | 4.88e-104 | 303 |
| MS.gene91576.t1 | MTR_3g068175 | 56.604 | 265 | 111 | 1 | 2 | 266 | 3 | 263 | 2.62e-102 | 299 |
| MS.gene91576.t1 | MTR_3g068085 | 58.964 | 251 | 99 | 1 | 16 | 266 | 15 | 261 | 4.23e-102 | 298 |
| MS.gene91576.t1 | MTR_4g064887 | 55.639 | 266 | 113 | 2 | 1 | 266 | 1 | 261 | 4.31e-102 | 298 |
| MS.gene91576.t1 | MTR_3g068175 | 55.762 | 269 | 111 | 2 | 2 | 266 | 3 | 267 | 6.68e-100 | 293 |
| MS.gene91576.t1 | MTR_3g068065 | 56.693 | 254 | 98 | 2 | 16 | 265 | 17 | 262 | 6.06e-96 | 283 |
| MS.gene91576.t1 | MTR_4g064883 | 59.500 | 200 | 81 | 0 | 11 | 210 | 9 | 208 | 1.44e-84 | 252 |
| MS.gene91576.t1 | MTR_4g064887 | 56.585 | 205 | 88 | 1 | 1 | 205 | 1 | 204 | 1.59e-79 | 239 |
| MS.gene91576.t1 | MTR_4g132850 | 33.597 | 253 | 153 | 6 | 16 | 264 | 7 | 248 | 1.07e-26 | 104 |
| MS.gene91576.t1 | MTR_7g094510 | 31.373 | 255 | 163 | 6 | 16 | 264 | 6 | 254 | 7.68e-26 | 102 |
| MS.gene91576.t1 | MTR_7g094520 | 31.939 | 263 | 159 | 6 | 12 | 264 | 7 | 259 | 1.47e-25 | 101 |
| MS.gene91576.t1 | MTR_3g085740 | 29.880 | 251 | 159 | 6 | 22 | 266 | 81 | 320 | 2.16e-22 | 94.4 |
| MS.gene91576.t1 | MTR_8g442750 | 27.626 | 257 | 173 | 4 | 16 | 264 | 14 | 265 | 1.77e-21 | 91.7 |
| MS.gene91576.t1 | MTR_4g052350 | 30.739 | 257 | 161 | 8 | 16 | 266 | 14 | 259 | 1.69e-20 | 88.6 |
| MS.gene91576.t1 | MTR_7g080410 | 31.183 | 186 | 122 | 4 | 23 | 203 | 45 | 229 | 6.30e-20 | 87.4 |
| MS.gene91576.t1 | MTR_7g080410 | 31.183 | 186 | 122 | 4 | 23 | 203 | 45 | 229 | 1.02e-19 | 87.0 |
| MS.gene91576.t1 | MTR_1g068955 | 31.008 | 258 | 157 | 6 | 16 | 262 | 14 | 261 | 1.34e-19 | 86.3 |
| MS.gene91576.t1 | MTR_4g131740 | 28.788 | 264 | 164 | 7 | 16 | 266 | 40 | 292 | 2.03e-19 | 85.9 |
| MS.gene91576.t1 | MTR_4g058810 | 28.682 | 258 | 173 | 8 | 16 | 266 | 11 | 264 | 1.08e-17 | 80.9 |
| MS.gene91576.t1 | MTR_4g052300 | 28.346 | 254 | 171 | 6 | 16 | 266 | 8 | 253 | 2.56e-17 | 79.7 |
| MS.gene91576.t1 | MTR_4g058840 | 28.846 | 260 | 170 | 9 | 16 | 266 | 11 | 264 | 6.11e-17 | 78.6 |
| MS.gene91576.t1 | MTR_4g058820 | 28.846 | 260 | 170 | 9 | 16 | 266 | 11 | 264 | 6.11e-17 | 78.6 |
| MS.gene91576.t1 | MTR_1196s0010 | 32.000 | 250 | 149 | 10 | 21 | 264 | 279 | 513 | 6.64e-17 | 80.5 |
| MS.gene91576.t1 | MTR_7g083870 | 31.034 | 261 | 161 | 9 | 16 | 265 | 35 | 287 | 1.10e-16 | 78.6 |
| MS.gene91576.t1 | MTR_1g082760 | 25.769 | 260 | 176 | 7 | 16 | 266 | 40 | 291 | 2.13e-16 | 77.4 |
| MS.gene91576.t1 | MTR_7g071680 | 29.889 | 271 | 164 | 9 | 16 | 265 | 29 | 294 | 2.77e-16 | 77.4 |
| MS.gene91576.t1 | MTR_4g052340 | 27.953 | 254 | 172 | 6 | 16 | 266 | 14 | 259 | 3.02e-16 | 76.6 |
| MS.gene91576.t1 | MTR_4g052320 | 28.346 | 254 | 172 | 5 | 16 | 266 | 8 | 254 | 3.98e-16 | 76.3 |
| MS.gene91576.t1 | MTR_6g023990 | 28.058 | 278 | 170 | 8 | 1 | 264 | 1 | 262 | 8.64e-16 | 75.5 |
| MS.gene91576.t1 | MTR_7g113650 | 26.718 | 262 | 171 | 7 | 16 | 266 | 40 | 291 | 1.56e-15 | 75.1 |
| MS.gene91576.t1 | MTR_6g023610 | 27.778 | 270 | 180 | 8 | 1 | 264 | 1 | 261 | 6.44e-15 | 73.2 |
| MS.gene91576.t1 | MTR_8g044240 | 28.713 | 202 | 130 | 6 | 16 | 206 | 69 | 267 | 7.86e-15 | 73.6 |
| MS.gene91576.t1 | MTR_4g078630 | 28.626 | 262 | 166 | 8 | 16 | 265 | 19 | 271 | 4.22e-14 | 70.9 |
| MS.gene91576.t1 | MTR_6g023910 | 27.941 | 272 | 177 | 10 | 1 | 264 | 1 | 261 | 1.11e-13 | 69.7 |
| MS.gene91576.t1 | MTR_7g105460 | 26.459 | 257 | 175 | 7 | 16 | 266 | 13 | 261 | 8.63e-13 | 67.0 |
| MS.gene91576.t1 | MTR_7g107670 | 28.195 | 266 | 161 | 7 | 16 | 265 | 33 | 284 | 1.38e-12 | 66.6 |
| MS.gene91576.t1 | MTR_7g110160 | 29.845 | 258 | 153 | 8 | 13 | 266 | 3 | 236 | 1.62e-12 | 65.9 |
| MS.gene91576.t1 | MTR_4g058830 | 31.210 | 157 | 102 | 5 | 113 | 266 | 57 | 210 | 1.80e-12 | 65.5 |
| MS.gene91576.t1 | MTR_8g096620 | 29.075 | 227 | 151 | 7 | 15 | 234 | 44 | 267 | 2.25e-12 | 66.6 |
| MS.gene91576.t1 | MTR_3g098470 | 33.784 | 148 | 95 | 3 | 12 | 158 | 28 | 173 | 3.72e-12 | 65.5 |
| MS.gene91576.t1 | MTR_7g105580 | 27.668 | 253 | 157 | 8 | 16 | 265 | 8 | 237 | 8.24e-12 | 63.9 |
| MS.gene91576.t1 | MTR_1579s0020 | 33.333 | 84 | 51 | 1 | 182 | 265 | 1 | 79 | 9.52e-12 | 60.1 |
| MS.gene91576.t1 | MTR_4g086410 | 31.579 | 209 | 125 | 8 | 18 | 213 | 6 | 209 | 1.67e-11 | 64.3 |
| MS.gene91576.t1 | MTR_1g031180 | 34.228 | 149 | 93 | 4 | 12 | 158 | 33 | 178 | 1.80e-11 | 63.5 |
| MS.gene91576.t1 | MTR_3g020670 | 29.885 | 261 | 166 | 7 | 16 | 265 | 16 | 270 | 8.22e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene91576.t1 | AT5G06060 | 58.203 | 256 | 103 | 1 | 11 | 266 | 4 | 255 | 1.94e-109 | 317 |
| MS.gene91576.t1 | AT1G07440 | 56.031 | 257 | 108 | 1 | 10 | 266 | 6 | 257 | 1.92e-103 | 301 |
| MS.gene91576.t1 | AT2G29290 | 54.688 | 256 | 112 | 1 | 11 | 266 | 2 | 253 | 2.15e-100 | 294 |
| MS.gene91576.t1 | AT2G29360 | 54.887 | 266 | 116 | 1 | 1 | 266 | 1 | 262 | 1.36e-99 | 292 |
| MS.gene91576.t1 | AT2G29340 | 54.297 | 256 | 113 | 2 | 11 | 266 | 2 | 253 | 9.10e-99 | 290 |
| MS.gene91576.t1 | AT2G29260 | 54.510 | 255 | 112 | 1 | 12 | 266 | 64 | 314 | 9.16e-99 | 292 |
| MS.gene91576.t1 | AT2G29300 | 54.406 | 261 | 106 | 3 | 11 | 266 | 2 | 254 | 1.47e-98 | 289 |
| MS.gene91576.t1 | AT2G29340 | 54.297 | 256 | 113 | 2 | 11 | 266 | 2 | 253 | 2.10e-98 | 290 |
| MS.gene91576.t1 | AT2G29320 | 55.725 | 262 | 102 | 4 | 11 | 266 | 7 | 260 | 3.36e-98 | 288 |
| MS.gene91576.t1 | AT2G29300 | 54.615 | 260 | 105 | 3 | 11 | 265 | 2 | 253 | 1.78e-97 | 287 |
| MS.gene91576.t1 | AT2G29310 | 55.078 | 256 | 111 | 2 | 11 | 266 | 2 | 253 | 2.11e-97 | 286 |
| MS.gene91576.t1 | AT2G29330 | 54.688 | 256 | 112 | 2 | 11 | 266 | 2 | 253 | 5.70e-97 | 285 |
| MS.gene91576.t1 | AT2G30670 | 53.516 | 256 | 115 | 2 | 11 | 266 | 2 | 253 | 1.74e-96 | 284 |
| MS.gene91576.t1 | AT2G29150 | 54.887 | 266 | 115 | 3 | 1 | 266 | 1 | 261 | 2.53e-96 | 284 |
| MS.gene91576.t1 | AT2G29370 | 55.000 | 260 | 112 | 2 | 8 | 266 | 7 | 262 | 1.53e-95 | 282 |
| MS.gene91576.t1 | AT2G29350 | 54.475 | 257 | 112 | 1 | 10 | 266 | 9 | 260 | 1.45e-94 | 279 |
| MS.gene91576.t1 | AT1G07450 | 53.516 | 256 | 112 | 3 | 12 | 266 | 4 | 253 | 7.27e-94 | 277 |
| MS.gene91576.t1 | AT2G29320 | 54.167 | 240 | 97 | 3 | 32 | 266 | 11 | 242 | 1.18e-86 | 258 |
| MS.gene91576.t1 | AT2G29290 | 52.564 | 234 | 107 | 1 | 33 | 266 | 7 | 236 | 4.13e-86 | 257 |
| MS.gene91576.t1 | AT2G29310 | 53.191 | 235 | 106 | 2 | 32 | 266 | 21 | 251 | 2.26e-83 | 250 |
| MS.gene91576.t1 | AT2G29340 | 55.000 | 200 | 90 | 0 | 11 | 210 | 2 | 201 | 3.25e-78 | 235 |
| MS.gene91576.t1 | AT2G29340 | 55.000 | 200 | 90 | 0 | 11 | 210 | 2 | 201 | 3.25e-78 | 235 |
| MS.gene91576.t1 | AT2G29320 | 58.462 | 195 | 79 | 2 | 11 | 203 | 7 | 201 | 1.75e-77 | 234 |
| MS.gene91576.t1 | AT2G29350 | 52.212 | 226 | 103 | 1 | 41 | 266 | 2 | 222 | 3.36e-77 | 234 |
| MS.gene91576.t1 | AT2G29350 | 57.653 | 196 | 83 | 0 | 10 | 205 | 9 | 204 | 6.04e-76 | 230 |
| MS.gene91576.t1 | AT2G29310 | 55.000 | 200 | 90 | 0 | 11 | 210 | 2 | 201 | 6.59e-76 | 229 |
| MS.gene91576.t1 | AT1G07440 | 58.537 | 164 | 68 | 0 | 10 | 173 | 6 | 169 | 2.16e-67 | 207 |
| MS.gene91576.t1 | AT2G29310 | 52.514 | 179 | 85 | 0 | 32 | 210 | 21 | 199 | 1.31e-61 | 193 |
| MS.gene91576.t1 | AT2G29170 | 67.778 | 90 | 29 | 0 | 13 | 102 | 13 | 102 | 3.30e-39 | 132 |
| MS.gene91576.t1 | AT3G03980 | 34.444 | 270 | 160 | 4 | 7 | 264 | 5 | 269 | 5.07e-35 | 127 |
| MS.gene91576.t1 | AT5G18210 | 34.749 | 259 | 154 | 6 | 15 | 264 | 7 | 259 | 2.48e-32 | 119 |
| MS.gene91576.t1 | AT4G13180 | 34.615 | 260 | 152 | 8 | 16 | 266 | 13 | 263 | 4.16e-30 | 114 |
| MS.gene91576.t1 | AT5G18210 | 33.716 | 261 | 145 | 7 | 15 | 266 | 7 | 248 | 1.71e-28 | 110 |
| MS.gene91576.t1 | AT4G05530 | 32.800 | 250 | 159 | 5 | 16 | 264 | 9 | 250 | 1.74e-26 | 104 |
| MS.gene91576.t1 | AT3G04000 | 32.841 | 271 | 162 | 6 | 7 | 263 | 5 | 269 | 5.07e-25 | 100 |
| MS.gene91576.t1 | AT1G24360 | 31.474 | 251 | 155 | 8 | 22 | 266 | 80 | 319 | 1.58e-23 | 97.8 |
| MS.gene91576.t1 | AT3G05260 | 30.798 | 263 | 158 | 7 | 16 | 266 | 37 | 287 | 5.23e-23 | 95.5 |
| MS.gene91576.t1 | AT1G54870 | 28.405 | 257 | 167 | 7 | 16 | 263 | 82 | 330 | 1.25e-22 | 95.5 |
| MS.gene91576.t1 | AT1G54870 | 28.405 | 257 | 167 | 7 | 16 | 263 | 84 | 332 | 1.28e-22 | 95.5 |
| MS.gene91576.t1 | AT3G12800 | 27.376 | 263 | 167 | 7 | 16 | 264 | 10 | 262 | 2.39e-21 | 91.3 |
| MS.gene91576.t1 | AT3G03330 | 28.862 | 246 | 155 | 6 | 12 | 252 | 37 | 267 | 8.20e-19 | 84.7 |
| MS.gene91576.t1 | AT3G55290 | 28.679 | 265 | 164 | 9 | 16 | 266 | 17 | 270 | 2.49e-18 | 82.8 |
| MS.gene91576.t1 | AT3G55290 | 28.679 | 265 | 164 | 9 | 16 | 266 | 18 | 271 | 2.71e-18 | 82.8 |
| MS.gene91576.t1 | AT3G26760 | 28.148 | 270 | 173 | 7 | 9 | 265 | 29 | 290 | 6.92e-17 | 79.0 |
| MS.gene91576.t1 | AT1G63380 | 27.132 | 258 | 178 | 8 | 16 | 266 | 15 | 269 | 7.36e-17 | 78.6 |
| MS.gene91576.t1 | AT1G63380 | 27.132 | 258 | 178 | 8 | 16 | 266 | 17 | 271 | 8.18e-17 | 78.6 |
| MS.gene91576.t1 | AT1G63380 | 27.132 | 258 | 178 | 8 | 16 | 266 | 19 | 273 | 8.46e-17 | 78.6 |
| MS.gene91576.t1 | AT1G63380 | 27.132 | 258 | 178 | 8 | 16 | 266 | 22 | 276 | 8.95e-17 | 78.6 |
| MS.gene91576.t1 | AT1G62610 | 27.132 | 258 | 178 | 8 | 16 | 266 | 14 | 268 | 2.46e-16 | 77.0 |
| MS.gene91576.t1 | AT1G62610 | 27.132 | 258 | 178 | 8 | 16 | 266 | 15 | 269 | 2.54e-16 | 77.0 |
| MS.gene91576.t1 | AT1G62610 | 27.132 | 258 | 178 | 8 | 16 | 266 | 19 | 273 | 2.83e-16 | 77.0 |
| MS.gene91576.t1 | AT1G62610 | 27.132 | 258 | 178 | 8 | 16 | 266 | 13 | 267 | 2.85e-16 | 77.0 |
| MS.gene91576.t1 | AT3G51680 | 28.114 | 281 | 181 | 7 | 1 | 265 | 20 | 295 | 3.79e-16 | 77.0 |
| MS.gene91576.t1 | AT3G42960 | 31.461 | 267 | 161 | 10 | 11 | 265 | 5 | 261 | 4.28e-16 | 76.3 |
| MS.gene91576.t1 | AT3G55310 | 28.077 | 260 | 172 | 9 | 16 | 266 | 17 | 270 | 5.80e-16 | 76.3 |
| MS.gene91576.t1 | AT5G04900 | 30.612 | 196 | 121 | 7 | 22 | 206 | 83 | 274 | 6.55e-16 | 76.6 |
| MS.gene91576.t1 | AT5G50690 | 29.293 | 198 | 124 | 7 | 16 | 208 | 45 | 231 | 1.15e-15 | 74.7 |
| MS.gene91576.t1 | AT5G50590 | 29.293 | 198 | 124 | 7 | 16 | 208 | 45 | 231 | 1.15e-15 | 74.7 |
| MS.gene91576.t1 | AT5G50690 | 29.293 | 198 | 124 | 7 | 16 | 208 | 45 | 231 | 2.31e-15 | 74.7 |
| MS.gene91576.t1 | AT5G50590 | 29.293 | 198 | 124 | 7 | 16 | 208 | 45 | 231 | 2.31e-15 | 74.7 |
| MS.gene91576.t1 | AT3G06060 | 27.885 | 208 | 143 | 2 | 16 | 220 | 37 | 240 | 4.11e-15 | 74.3 |
| MS.gene91576.t1 | AT3G06060 | 27.885 | 208 | 143 | 2 | 16 | 220 | 54 | 257 | 4.68e-15 | 74.3 |
| MS.gene91576.t1 | AT3G03350 | 32.484 | 157 | 93 | 3 | 51 | 204 | 207 | 353 | 8.15e-15 | 73.9 |
| MS.gene91576.t1 | AT4G03140 | 27.734 | 256 | 175 | 7 | 16 | 265 | 78 | 329 | 2.16e-14 | 72.4 |
| MS.gene91576.t1 | AT5G65205 | 30.726 | 179 | 117 | 4 | 22 | 199 | 12 | 184 | 5.98e-14 | 70.5 |
| MS.gene91576.t1 | AT2G47140 | 28.125 | 256 | 172 | 7 | 16 | 266 | 6 | 254 | 6.67e-14 | 70.1 |
| MS.gene91576.t1 | AT3G47350 | 27.854 | 219 | 143 | 8 | 15 | 226 | 43 | 253 | 7.91e-14 | 70.5 |
| MS.gene91576.t1 | AT3G47350 | 27.854 | 219 | 143 | 8 | 15 | 226 | 43 | 253 | 8.06e-14 | 70.5 |
| MS.gene91576.t1 | AT2G47130 | 27.344 | 256 | 173 | 7 | 16 | 266 | 6 | 253 | 1.14e-13 | 69.3 |
| MS.gene91576.t1 | AT3G26770 | 29.167 | 264 | 162 | 10 | 16 | 265 | 41 | 293 | 1.52e-13 | 69.7 |
| MS.gene91576.t1 | AT2G17845 | 23.282 | 262 | 185 | 7 | 16 | 266 | 47 | 303 | 1.59e-13 | 69.7 |
| MS.gene91576.t1 | AT4G13250 | 28.293 | 205 | 126 | 4 | 22 | 206 | 165 | 368 | 1.64e-13 | 70.5 |
| MS.gene91576.t1 | AT5G10050 | 28.421 | 190 | 129 | 4 | 22 | 210 | 11 | 194 | 5.66e-13 | 67.8 |
| MS.gene91576.t1 | AT1G52340 | 30.451 | 266 | 161 | 9 | 16 | 265 | 18 | 275 | 1.10e-12 | 67.0 |
| MS.gene91576.t1 | AT3G29260 | 29.231 | 260 | 163 | 9 | 16 | 266 | 6 | 253 | 2.42e-12 | 65.9 |
| MS.gene91576.t1 | AT1G49670 | 32.020 | 203 | 123 | 8 | 18 | 207 | 6 | 206 | 2.64e-12 | 67.0 |
| MS.gene91576.t1 | AT1G49670 | 32.020 | 203 | 123 | 8 | 18 | 207 | 6 | 206 | 3.56e-12 | 66.6 |
| MS.gene91576.t1 | AT5G50600 | 28.934 | 197 | 131 | 7 | 15 | 207 | 44 | 235 | 2.52e-11 | 63.5 |
| MS.gene91576.t1 | AT5G50700 | 28.934 | 197 | 131 | 7 | 15 | 207 | 44 | 235 | 2.52e-11 | 63.5 |
| MS.gene91576.t1 | AT5G19200 | 26.633 | 199 | 139 | 2 | 16 | 211 | 35 | 229 | 3.97e-11 | 62.8 |
Find 53 sgRNAs with CRISPR-Local
Find 117 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTGGAAGAGTTAGCAGAATT+TGG | 0.185342 | 7.1:-38381570 | MS.gene91576:CDS |
| ATAATTAAAATTACCTTTAG+AGG | 0.208184 | 7.1:+38380295 | None:intergenic |
| CCATTCCAATGCTAAGTTCT+TGG | 0.213276 | 7.1:+38380164 | None:intergenic |
| GTATACATATCCTCAATTTC+AGG | 0.273951 | 7.1:-38380353 | MS.gene91576:CDS |
| ACCTGTGATGACCTTACTTT+TGG | 0.297664 | 7.1:-38380103 | MS.gene91576:CDS |
| GATCAAAGATGGTCACTAAA+AGG | 0.312455 | 7.1:-38381747 | MS.gene91576:CDS |
| GTTCTTGGTGCATTGATTCA+TGG | 0.329472 | 7.1:+38380179 | None:intergenic |
| GTATTATCTAAGATGGGTTT+AGG | 0.353458 | 7.1:+38380479 | None:intergenic |
| TTCATCAGTATTATCTAAGA+TGG | 0.370033 | 7.1:+38380472 | None:intergenic |
| CGTGCTAATGTTGTGGCTCC+TGG | 0.373198 | 7.1:-38380126 | MS.gene91576:CDS |
| GGAATGACAGCTCTAGTAAC+TGG | 0.387510 | 7.1:-38381726 | MS.gene91576:CDS |
| AACTGTTAGGTAAACAATGC+TGG | 0.396239 | 7.1:-38380512 | MS.gene91576:intron |
| ATGGTAACCAGACACAAAAT+TGG | 0.420948 | 7.1:+38380427 | None:intergenic |
| TTAACAAATGTTTGAAAGAG+TGG | 0.424747 | 7.1:-38381509 | MS.gene91576:CDS |
| TCTGTTTATGCAGCCTCTAA+AGG | 0.433962 | 7.1:-38380308 | MS.gene91576:intron |
| GGTGTGCAAGTTGGCACAAA+TGG | 0.434463 | 7.1:+38380408 | None:intergenic |
| GAAGATATAACAACTACAAT+TGG | 0.449713 | 7.1:-38380452 | MS.gene91576:CDS |
| ACAGTAGCTTCAATCTTTCA+AGG | 0.454086 | 7.1:-38381411 | MS.gene91576:CDS |
| CATAGCATTCTCCAAAAGTA+AGG | 0.480973 | 7.1:+38380092 | None:intergenic |
| ATCAATCAGGTATGCAATTG+TGG | 0.492239 | 7.1:-38381589 | MS.gene91576:intron |
| ACTGGTGGAACCCGAGGCAT+AGG | 0.498705 | 7.1:-38381708 | MS.gene91576:CDS |
| CCAAGAACTTAGCATTGGAA+TGG | 0.520563 | 7.1:-38380164 | MS.gene91576:CDS |
| ACCAATGCTGATATATCCTT+AGG | 0.521567 | 7.1:+38379750 | None:intergenic |
| CAAGAACTTAGCATTGGAAT+GGG | 0.525445 | 7.1:-38380163 | MS.gene91576:CDS |
| AGTAAGGTCATCACAGGTCC+AGG | 0.529196 | 7.1:+38380108 | None:intergenic |
| GAGAACTGACCCTATGCCTC+GGG | 0.531174 | 7.1:+38381698 | None:intergenic |
| TCATCAGTATTATCTAAGAT+GGG | 0.531379 | 7.1:+38380473 | None:intergenic |
| CAAACACCTAGTGGTCGGAT+TGG | 0.531397 | 7.1:-38379777 | MS.gene91576:CDS |
| ACCTAAGGATATATCAGCAT+TGG | 0.534231 | 7.1:-38379751 | MS.gene91576:CDS |
| AGCTTTGAGACCTGAAATTG+AGG | 0.537196 | 7.1:+38380343 | None:intergenic |
| ACTGTTAGGTAAACAATGCT+GGG | 0.538511 | 7.1:-38380511 | MS.gene91576:intron |
| TCCAAAAGTAAGGTCATCAC+AGG | 0.548783 | 7.1:+38380102 | None:intergenic |
| GCTGCATAAACAGAAACAAA+AGG | 0.550367 | 7.1:+38380317 | None:intergenic |
| TGGTCGGATTGGAGAACCTA+AGG | 0.554317 | 7.1:-38379766 | MS.gene91576:CDS |
| ATGCACCAAGAACTTAGCAT+TGG | 0.554507 | 7.1:-38380169 | MS.gene91576:CDS |
| CCAGTGATGTGTGATGCAGC+TGG | 0.556867 | 7.1:+38379711 | None:intergenic |
| GGTTCTCCAATCCGACCACT+AGG | 0.556909 | 7.1:+38379771 | None:intergenic |
| CCAGCTGCATCACACATCAC+TGG | 0.560488 | 7.1:-38379711 | MS.gene91576:CDS |
| TTGAAAGAGTGGAAAGACAA+AGG | 0.568067 | 7.1:-38381498 | MS.gene91576:CDS |
| CTTAGCATTGGAATGGGCAA+AGG | 0.572011 | 7.1:-38380157 | MS.gene91576:CDS |
| AGAGAACTGACCCTATGCCT+CGG | 0.576626 | 7.1:+38381697 | None:intergenic |
| GCAGCTTCAAAGATCAAAGA+TGG | 0.579135 | 7.1:-38381758 | MS.gene91576:CDS |
| TAATATTCGTGCTAATGTTG+TGG | 0.584061 | 7.1:-38380133 | MS.gene91576:CDS |
| GGACAAATTATAGCAGCAGA+TGG | 0.590646 | 7.1:-38379690 | MS.gene91576:CDS |
| CAAATTATAGCAGCAGATGG+AGG | 0.609645 | 7.1:-38379687 | MS.gene91576:CDS |
| CTGGTGGAACCCGAGGCATA+GGG | 0.613722 | 7.1:-38381707 | MS.gene91576:intron |
| CTCGACAACATTATCCACTC+CGG | 0.615069 | 7.1:+38379812 | None:intergenic |
| CTAGTAACTGGTGGAACCCG+AGG | 0.629591 | 7.1:-38381714 | MS.gene91576:CDS |
| CGGAGTGGATAATGTTGTCG+AGG | 0.633007 | 7.1:-38379811 | MS.gene91576:CDS |
| TGTCTCAAACACCTAGTGGT+CGG | 0.653560 | 7.1:-38379782 | MS.gene91576:CDS |
| ATAGTGTCTCAAACACCTAG+TGG | 0.659894 | 7.1:-38379786 | MS.gene91576:CDS |
| ATAGAAATTAGATGCCGGAG+TGG | 0.664921 | 7.1:-38379826 | MS.gene91576:intron |
| ATGACAGCTCTAGTAACTGG+TGG | 0.670365 | 7.1:-38381723 | MS.gene91576:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATTAAAGTTTTTTTTTGAA+AGG | - | chr7.1:38380238-38380257 | MS.gene91576:intron | 10.0% |
| !!! | TTATTAAAGTTATTAAGTTT+TGG | - | chr7.1:38380266-38380285 | MS.gene91576:intron | 10.0% |
| !! | ATAATTAAAATTACCTTTAG+AGG | + | chr7.1:38381159-38381178 | None:intergenic | 15.0% |
| !! | CAGTTTACTTTATTATAAAA+TGG | + | chr7.1:38380522-38380541 | None:intergenic | 15.0% |
| !! | TAATTAGACAAAGAAAAAAA+AGG | + | chr7.1:38380308-38380327 | None:intergenic | 15.0% |
| !!! | TAATCATTCAAATTTGATTT+TGG | - | chr7.1:38380087-38380106 | MS.gene91576:intron | 15.0% |
| !! | ACTTTAATAAAATACCATTG+TGG | + | chr7.1:38380227-38380246 | None:intergenic | 20.0% |
| !! | AGAATACAAAAGTTCAAATT+AGG | + | chr7.1:38381555-38381574 | None:intergenic | 20.0% |
| !! | ATATAATCAAAACAAAGCAA+GGG | - | chr7.1:38380157-38380176 | MS.gene91576:CDS | 20.0% |
| !! | CTTTAATAAAATACCATTGT+GGG | + | chr7.1:38380226-38380245 | None:intergenic | 20.0% |
| !! | TATATAATCAAAACAAAGCA+AGG | - | chr7.1:38380156-38380175 | MS.gene91576:CDS | 20.0% |
| !! | TATGATTTATTCACATAGTT+TGG | - | chr7.1:38381383-38381402 | MS.gene91576:intron | 20.0% |
| !!! | AAATTTTTAAAAACCCACAA+TGG | - | chr7.1:38380210-38380229 | MS.gene91576:intron | 20.0% |
| !!! | ATTTTTTTTTAGAGGATAGT+AGG | + | chr7.1:38380663-38380682 | None:intergenic | 20.0% |
| !!! | CTTTTTTTGAATAATCAATC+AGG | - | chr7.1:38379849-38379868 | MS.gene91576:intron | 20.0% |
| !!! | TTAGCAAGATTTTTTTTTAG+AGG | + | chr7.1:38380671-38380690 | None:intergenic | 20.0% |
| !!! | TTTTTATAGAAATTAGATGC+CGG | - | chr7.1:38381620-38381639 | MS.gene91576:intron | 20.0% |
| ! | AATTAGTTGGATGTCTAATT+TGG | - | chr7.1:38381529-38381548 | MS.gene91576:CDS | 25.0% |
| ! | ATTGAATTTCTCAAACTGTT+AGG | - | chr7.1:38380926-38380945 | MS.gene91576:intron | 25.0% |
| ! | CAATACATTGTAATATGCAT+TGG | + | chr7.1:38380400-38380419 | None:intergenic | 25.0% |
| ! | GAAGATATAACAACTACAAT+TGG | - | chr7.1:38380999-38381018 | MS.gene91576:intron | 25.0% |
| ! | TATAATCAAAACAAAGCAAG+GGG | - | chr7.1:38380158-38380177 | MS.gene91576:CDS | 25.0% |
| ! | TCATATTATACCCTTTAACT+TGG | - | chr7.1:38381185-38381204 | MS.gene91576:intron | 25.0% |
| ! | TTAACAAATGTTTGAAAGAG+TGG | - | chr7.1:38379942-38379961 | MS.gene91576:intron | 25.0% |
| ! | TTCATCAGTATTATCTAAGA+TGG | + | chr7.1:38380982-38381001 | None:intergenic | 25.0% |
| !! | TCATCAGTATTATCTAAGAT+GGG | + | chr7.1:38380981-38381000 | None:intergenic | 25.0% |
| !!! | ATCCAACTAATTTTTTGGAA+GGG | + | chr7.1:38381521-38381540 | None:intergenic | 25.0% |
| !!! | ATCCAGATGCTTTTAAAAAA+GGG | + | chr7.1:38381067-38381086 | None:intergenic | 25.0% |
| !!! | ATTGCTATTTCTATCTATGT+AGG | - | chr7.1:38381247-38381266 | MS.gene91576:intron | 25.0% |
| !!! | CTCTTTTTTATTGTACCATT+GGG | - | chr7.1:38380773-38380792 | MS.gene91576:intron | 25.0% |
| !!! | TACAATAAAAAAGAGCACTA+AGG | + | chr7.1:38380768-38380787 | None:intergenic | 25.0% |
| !!! | TAGACATCCAACTAATTTTT+TGG | + | chr7.1:38381526-38381545 | None:intergenic | 25.0% |
| !!! | TATCCAGATGCTTTTAAAAA+AGG | + | chr7.1:38381068-38381087 | None:intergenic | 25.0% |
| !!! | TTTTTAAAAGCATCTGGATA+TGG | - | chr7.1:38381068-38381087 | MS.gene91576:intron | 25.0% |
| AACCCTTAAAGGTGAATAAA+CGG | - | chr7.1:38380351-38380370 | MS.gene91576:CDS | 30.0% | |
| GTATACATATCCTCAATTTC+AGG | - | chr7.1:38381098-38381117 | MS.gene91576:intron | 30.0% | |
| GTTACATGAGAAAAACTAAG+AGG | + | chr7.1:38380729-38380748 | None:intergenic | 30.0% | |
| TAATATTCGTGCTAATGTTG+TGG | - | chr7.1:38381318-38381337 | MS.gene91576:intron | 30.0% | |
| TTATTCACATAGTTTGGCAA+AGG | - | chr7.1:38381389-38381408 | MS.gene91576:intron | 30.0% | |
| TTCCCTTCCAAAAAATTAGT+TGG | - | chr7.1:38381516-38381535 | MS.gene91576:CDS | 30.0% | |
| ! | ACAAAGGATTTTGTGTAACA+GGG | - | chr7.1:38379969-38379988 | MS.gene91576:intron | 30.0% |
| ! | GTATTATCTAAGATGGGTTT+AGG | + | chr7.1:38380975-38380994 | None:intergenic | 30.0% |
| ! | TGTCTAATTAACTAGCTTAG+TGG | - | chr7.1:38380318-38380337 | MS.gene91576:CDS | 30.0% |
| ! | TTTCCATCAATTTTTCACGT+TGG | + | chr7.1:38380021-38380040 | None:intergenic | 30.0% |
| !!! | CATCCAACTAATTTTTTGGA+AGG | + | chr7.1:38381522-38381541 | None:intergenic | 30.0% |
| !!! | GCTCTTTTTTATTGTACCAT+TGG | - | chr7.1:38380772-38380791 | MS.gene91576:intron | 30.0% |
| AAATGCTAACAAGTGCTCTT+AGG | + | chr7.1:38380582-38380601 | None:intergenic | 35.0% | |
| AACTGTTAGGTAAACAATGC+TGG | - | chr7.1:38380939-38380958 | MS.gene91576:intron | 35.0% | |
| AATGCTAACAAGTGCTCTTA+GGG | + | chr7.1:38380581-38380600 | None:intergenic | 35.0% | |
| ACAGTAGCTTCAATCTTTCA+AGG | - | chr7.1:38380040-38380059 | MS.gene91576:intron | 35.0% | |
| ACCAATGCTGATATATCCTT+AGG | + | chr7.1:38381704-38381723 | None:intergenic | 35.0% | |
| ACCCTTAAAGGTGAATAAAC+GGG | - | chr7.1:38380352-38380371 | MS.gene91576:CDS | 35.0% | |
| ACCTAAGGATATATCAGCAT+TGG | - | chr7.1:38381700-38381719 | MS.gene91576:intron | 35.0% | |
| ACTGTTAGGTAAACAATGCT+GGG | - | chr7.1:38380940-38380959 | MS.gene91576:intron | 35.0% | |
| ATCAATCAGGTATGCAATTG+TGG | - | chr7.1:38379862-38379881 | MS.gene91576:intron | 35.0% | |
| ATGGTAACCAGACACAAAAT+TGG | + | chr7.1:38381027-38381046 | None:intergenic | 35.0% | |
| CATAGCATTCTCCAAAAGTA+AGG | + | chr7.1:38381362-38381381 | None:intergenic | 35.0% | |
| CTGCAAAGTTCCAAGTTAAA+GGG | + | chr7.1:38381198-38381217 | None:intergenic | 35.0% | |
| GATCAAAGATGGTCACTAAA+AGG | - | chr7.1:38379704-38379723 | MS.gene91576:CDS | 35.0% | |
| GCTGCATAAACAGAAACAAA+AGG | + | chr7.1:38381137-38381156 | None:intergenic | 35.0% | |
| TCCCGTTTATTCACCTTTAA+GGG | + | chr7.1:38380356-38380375 | None:intergenic | 35.0% | |
| TCGATTGAGTTATGCTTACA+TGG | - | chr7.1:38380426-38380445 | MS.gene91576:CDS | 35.0% | |
| TCTGCAAAGTTCCAAGTTAA+AGG | + | chr7.1:38381199-38381218 | None:intergenic | 35.0% | |
| TGACCAACGTGAAAAATTGA+TGG | - | chr7.1:38380015-38380034 | MS.gene91576:intron | 35.0% | |
| TTCCCGTTTATTCACCTTTA+AGG | + | chr7.1:38380357-38380376 | None:intergenic | 35.0% | |
| TTGAAAGAGTGGAAAGACAA+AGG | - | chr7.1:38379953-38379972 | MS.gene91576:intron | 35.0% | |
| ! | ATTGGTACCAATTTTGTGTC+TGG | - | chr7.1:38381017-38381036 | MS.gene91576:intron | 35.0% |
| ! | CAAGAACTTAGCATTGGAAT+GGG | - | chr7.1:38381288-38381307 | MS.gene91576:intron | 35.0% |
| ! | GACAAAGGATTTTGTGTAAC+AGG | - | chr7.1:38379968-38379987 | MS.gene91576:intron | 35.0% |
| ! | TAATTAACTAGCTTAGTGGC+CGG | - | chr7.1:38380322-38380341 | MS.gene91576:CDS | 35.0% |
| ! | TTAAAAAAGGGTGTGCAAGT+TGG | + | chr7.1:38381055-38381074 | None:intergenic | 35.0% |
| !! | ACCTTTAAGGGTTGATTTTC+CGG | + | chr7.1:38380344-38380363 | None:intergenic | 35.0% |
| !! | CTTACTTTTGGAGAATGCTA+TGG | - | chr7.1:38381360-38381379 | MS.gene91576:intron | 35.0% |
| !!! | CACCCTTTTTTAAAAGCATC+TGG | - | chr7.1:38381062-38381081 | MS.gene91576:intron | 35.0% |
| ATAGAAATTAGATGCCGGAG+TGG | - | chr7.1:38381625-38381644 | MS.gene91576:intron | 40.0% | |
| ATAGTGTCTCAAACACCTAG+TGG | - | chr7.1:38381665-38381684 | MS.gene91576:intron | 40.0% | |
| ATGCACCAAGAACTTAGCAT+TGG | - | chr7.1:38381282-38381301 | MS.gene91576:intron | 40.0% | |
| CAAATTATAGCAGCAGATGG+AGG | - | chr7.1:38381764-38381783 | MS.gene91576:CDS | 40.0% | |
| CCATTCCAATGCTAAGTTCT+TGG | + | chr7.1:38381290-38381309 | None:intergenic | 40.0% | |
| GCAGCTTCAAAGATCAAAGA+TGG | - | chr7.1:38379693-38379712 | MS.gene91576:CDS | 40.0% | |
| GGACAAATTATAGCAGCAGA+TGG | - | chr7.1:38381761-38381780 | MS.gene91576:CDS | 40.0% | |
| GTGGAAGAGTTAGCAGAATT+TGG | - | chr7.1:38379881-38379900 | MS.gene91576:intron | 40.0% | |
| TCCAAAAGTAAGGTCATCAC+AGG | + | chr7.1:38381352-38381371 | None:intergenic | 40.0% | |
| TCTGTTTATGCAGCCTCTAA+AGG | - | chr7.1:38381143-38381162 | MS.gene91576:intron | 40.0% | |
| ! | ACCTGTGATGACCTTACTTT+TGG | - | chr7.1:38381348-38381367 | MS.gene91576:intron | 40.0% |
| ! | ACGCAAGTTGCAACTTTTGA+CGG | + | chr7.1:38380805-38380824 | None:intergenic | 40.0% |
| ! | CCAAGAACTTAGCATTGGAA+TGG | - | chr7.1:38381287-38381306 | MS.gene91576:intron | 40.0% |
| !! | AGCTTTGAGACCTGAAATTG+AGG | + | chr7.1:38381111-38381130 | None:intergenic | 40.0% |
| !! | GTTCTTGGTGCATTGATTCA+TGG | + | chr7.1:38381275-38381294 | None:intergenic | 40.0% |
| CATGCGCTCACATATTGAGA+AGG | - | chr7.1:38381418-38381437 | MS.gene91576:CDS | 45.0% | |
| CTCGACAACATTATCCACTC+CGG | + | chr7.1:38381642-38381661 | None:intergenic | 45.0% | |
| CTTCTCAATATGTGAGCGCA+TGG | + | chr7.1:38381420-38381439 | None:intergenic | 45.0% | |
| GCCGGAAAATCAACCCTTAA+AGG | - | chr7.1:38380340-38380359 | MS.gene91576:CDS | 45.0% | |
| TGTCTCAAACACCTAGTGGT+CGG | - | chr7.1:38381669-38381688 | MS.gene91576:intron | 45.0% | |
| ! | ATGACAGCTCTAGTAACTGG+TGG | - | chr7.1:38379728-38379747 | MS.gene91576:CDS | 45.0% |
| ! | CGCAAGTTGCAACTTTTGAC+GGG | + | chr7.1:38380804-38380823 | None:intergenic | 45.0% |
| ! | CTTAGCATTGGAATGGGCAA+AGG | - | chr7.1:38381294-38381313 | MS.gene91576:intron | 45.0% |
| ! | GCAAGTTGCAACTTTTGACG+GGG | + | chr7.1:38380803-38380822 | None:intergenic | 45.0% |
| ! | GGAATGACAGCTCTAGTAAC+TGG | - | chr7.1:38379725-38379744 | MS.gene91576:CDS | 45.0% |
| !!! | TAAATTTTTTATATTTTTGT+TGG | - | chr7.1:38380692-38380711 | MS.gene91576:intron | 5.0% |
| AGAGAACTGACCCTATGCCT+CGG | + | chr7.1:38379757-38379776 | None:intergenic | 50.0% | |
| AGTAAGGTCATCACAGGTCC+AGG | + | chr7.1:38381346-38381365 | None:intergenic | 50.0% | |
| CAAACACCTAGTGGTCGGAT+TGG | - | chr7.1:38381674-38381693 | MS.gene91576:intron | 50.0% | |
| CGGAGTGGATAATGTTGTCG+AGG | - | chr7.1:38381640-38381659 | MS.gene91576:intron | 50.0% | |
| ! | GGTGTGCAAGTTGGCACAAA+TGG | + | chr7.1:38381046-38381065 | None:intergenic | 50.0% |
| ! | TGGTCGGATTGGAGAACCTA+AGG | - | chr7.1:38381685-38381704 | MS.gene91576:intron | 50.0% |
| !!! | CAAAGCAAGGGGCTAGCTTT+TGG | - | chr7.1:38380169-38380188 | MS.gene91576:CDS | 50.0% |
| CCAGCTGCATCACACATCAC+TGG | - | chr7.1:38381740-38381759 | MS.gene91576:CDS | 55.0% | |
| CCAGTGATGTGTGATGCAGC+TGG | + | chr7.1:38381743-38381762 | None:intergenic | 55.0% | |
| CGTGCTAATGTTGTGGCTCC+TGG | - | chr7.1:38381325-38381344 | MS.gene91576:intron | 55.0% | |
| CTAGTAACTGGTGGAACCCG+AGG | - | chr7.1:38379737-38379756 | MS.gene91576:CDS | 55.0% | |
| GAGAACTGACCCTATGCCTC+GGG | + | chr7.1:38379756-38379775 | None:intergenic | 55.0% | |
| GGTTCTCCAATCCGACCACT+AGG | + | chr7.1:38381683-38381702 | None:intergenic | 55.0% | |
| ! | GTTGCAACTTTTGACGGGGC+TGG | + | chr7.1:38380799-38380818 | None:intergenic | 55.0% |
| ACTGGTGGAACCCGAGGCAT+AGG | - | chr7.1:38379743-38379762 | MS.gene91576:CDS | 60.0% | |
| CTGGTGGAACCCGAGGCATA+GGG | - | chr7.1:38379744-38379763 | MS.gene91576:CDS | 60.0% | |
| !!! | TTTTGACGGGGCTGGCCCAA+TGG | + | chr7.1:38380791-38380810 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 38379674 | 38381799 | 38379674 | ID=MS.gene91576 |
| chr7.1 | mRNA | 38379674 | 38381799 | 38379674 | ID=MS.gene91576.t1;Parent=MS.gene91576 |
| chr7.1 | exon | 38381708 | 38381799 | 38381708 | ID=MS.gene91576.t1.exon1;Parent=MS.gene91576.t1 |
| chr7.1 | CDS | 38381708 | 38381799 | 38381708 | ID=cds.MS.gene91576.t1;Parent=MS.gene91576.t1 |
| chr7.1 | exon | 38381395 | 38381602 | 38381395 | ID=MS.gene91576.t1.exon2;Parent=MS.gene91576.t1 |
| chr7.1 | CDS | 38381395 | 38381602 | 38381395 | ID=cds.MS.gene91576.t1;Parent=MS.gene91576.t1 |
| chr7.1 | exon | 38380309 | 38380525 | 38380309 | ID=MS.gene91576.t1.exon3;Parent=MS.gene91576.t1 |
| chr7.1 | CDS | 38380309 | 38380525 | 38380309 | ID=cds.MS.gene91576.t1;Parent=MS.gene91576.t1 |
| chr7.1 | exon | 38380092 | 38380204 | 38380092 | ID=MS.gene91576.t1.exon4;Parent=MS.gene91576.t1 |
| chr7.1 | CDS | 38380092 | 38380204 | 38380092 | ID=cds.MS.gene91576.t1;Parent=MS.gene91576.t1 |
| chr7.1 | exon | 38379674 | 38379844 | 38379674 | ID=MS.gene91576.t1.exon5;Parent=MS.gene91576.t1 |
| chr7.1 | CDS | 38379674 | 38379844 | 38379674 | ID=cds.MS.gene91576.t1;Parent=MS.gene91576.t1 |
| Gene Sequence |
| Protein sequence |
