Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98170.t1 | XP_013444705.1 | 99.6 | 284 | 1 | 0 | 1 | 284 | 1 | 284 | 4.80E-153 | 550.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98170.t1 | Q9LSV0 | 82.1 | 285 | 50 | 1 | 1 | 284 | 1 | 285 | 1.4e-129 | 463.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98170.t1 | I3SHU4 | 99.6 | 284 | 1 | 0 | 1 | 284 | 1 | 284 | 3.4e-153 | 550.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049285 | MS.gene98170 | 0.806428 | 8.27E-50 | -1.69E-46 |
| MS.gene049369 | MS.gene98170 | 0.814532 | 1.47E-51 | -1.69E-46 |
| MS.gene049609 | MS.gene98170 | 0.851986 | 6.21E-61 | -1.69E-46 |
| MS.gene049805 | MS.gene98170 | 0.826168 | 3.15E-54 | -1.69E-46 |
| MS.gene050083 | MS.gene98170 | -0.800023 | 1.75E-48 | -1.69E-46 |
| MS.gene050397 | MS.gene98170 | 0.812399 | 4.32E-51 | -1.69E-46 |
| MS.gene050432 | MS.gene98170 | 0.833842 | 4.23E-56 | -1.69E-46 |
| MS.gene050593 | MS.gene98170 | 0.832071 | 1.17E-55 | -1.69E-46 |
| MS.gene050670 | MS.gene98170 | 0.809459 | 1.87E-50 | -1.69E-46 |
| MS.gene050675 | MS.gene98170 | 0.800466 | 1.42E-48 | -1.69E-46 |
| MS.gene050686 | MS.gene98170 | 0.802872 | 4.57E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene98170 | 0.816428 | 5.56E-52 | -1.69E-46 |
| MS.gene050770 | MS.gene98170 | 0.823452 | 1.37E-53 | -1.69E-46 |
| MS.gene050772 | MS.gene98170 | 0.853802 | 1.88E-61 | -1.69E-46 |
| MS.gene05105 | MS.gene98170 | 0.860126 | 2.57E-63 | -1.69E-46 |
| MS.gene051228 | MS.gene98170 | 0.85278 | 3.69E-61 | -1.69E-46 |
| MS.gene051617 | MS.gene98170 | 0.816287 | 5.98E-52 | -1.69E-46 |
| MS.gene051666 | MS.gene98170 | 0.827525 | 1.49E-54 | -1.69E-46 |
| MS.gene051692 | MS.gene98170 | 0.809233 | 2.09E-50 | -1.69E-46 |
| MS.gene051694 | MS.gene98170 | 0.814107 | 1.82E-51 | -1.69E-46 |
| MS.gene051810 | MS.gene98170 | 0.832024 | 1.20E-55 | -1.69E-46 |
| MS.gene051858 | MS.gene98170 | 0.859694 | 3.46E-63 | -1.69E-46 |
| MS.gene051874 | MS.gene98170 | 0.803312 | 3.70E-49 | -1.69E-46 |
| MS.gene052078 | MS.gene98170 | 0.810562 | 1.08E-50 | -1.69E-46 |
| MS.gene052271 | MS.gene98170 | 0.80438 | 2.22E-49 | -1.69E-46 |
| MS.gene052290 | MS.gene98170 | 0.814655 | 1.38E-51 | -1.69E-46 |
| MS.gene052310 | MS.gene98170 | 0.817661 | 2.94E-52 | -1.69E-46 |
| MS.gene052322 | MS.gene98170 | 0.811145 | 8.11E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene98170 | 0.851536 | 8.32E-61 | -1.69E-46 |
| MS.gene052421 | MS.gene98170 | 0.807597 | 4.68E-50 | -1.69E-46 |
| MS.gene052484 | MS.gene98170 | 0.839659 | 1.39E-57 | -1.69E-46 |
| MS.gene052508 | MS.gene98170 | 0.808877 | 2.50E-50 | -1.69E-46 |
| MS.gene052615 | MS.gene98170 | 0.814705 | 1.34E-51 | -1.69E-46 |
| MS.gene052870 | MS.gene98170 | 0.844709 | 6.39E-59 | -1.69E-46 |
| MS.gene052872 | MS.gene98170 | 0.83415 | 3.54E-56 | -1.69E-46 |
| MS.gene053009 | MS.gene98170 | 0.844647 | 6.64E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene98170 | 0.838626 | 2.57E-57 | -1.69E-46 |
| MS.gene053104 | MS.gene98170 | 0.861568 | 9.37E-64 | -1.69E-46 |
| MS.gene053207 | MS.gene98170 | 0.856094 | 4.06E-62 | -1.69E-46 |
| MS.gene053209 | MS.gene98170 | 0.897599 | 1.20E-76 | -1.69E-46 |
| MS.gene053213 | MS.gene98170 | 0.813859 | 2.07E-51 | -1.69E-46 |
| MS.gene053286 | MS.gene98170 | 0.804158 | 2.47E-49 | -1.69E-46 |
| MS.gene053322 | MS.gene98170 | 0.849623 | 2.87E-60 | -1.69E-46 |
| MS.gene053384 | MS.gene98170 | 0.815541 | 8.77E-52 | -1.69E-46 |
| MS.gene053449 | MS.gene98170 | 0.844663 | 6.58E-59 | -1.69E-46 |
| MS.gene053574 | MS.gene98170 | 0.806482 | 8.05E-50 | -1.69E-46 |
| MS.gene053632 | MS.gene98170 | 0.802575 | 5.26E-49 | -1.69E-46 |
| MS.gene053824 | MS.gene98170 | 0.806494 | 8.01E-50 | -1.69E-46 |
| MS.gene053916 | MS.gene98170 | 0.826756 | 2.28E-54 | -1.69E-46 |
| MS.gene054376 | MS.gene98170 | 0.816102 | 6.58E-52 | -1.69E-46 |
| MS.gene054600 | MS.gene98170 | 0.815627 | 8.39E-52 | -1.69E-46 |
| MS.gene054642 | MS.gene98170 | 0.825614 | 4.26E-54 | -1.69E-46 |
| MS.gene05494 | MS.gene98170 | 0.818086 | 2.35E-52 | -1.69E-46 |
| MS.gene054955 | MS.gene98170 | 0.805681 | 1.19E-49 | -1.69E-46 |
| MS.gene05505 | MS.gene98170 | 0.852649 | 4.02E-61 | -1.69E-46 |
| MS.gene055116 | MS.gene98170 | 0.806061 | 9.88E-50 | -1.69E-46 |
| MS.gene055206 | MS.gene98170 | 0.83078 | 2.42E-55 | -1.69E-46 |
| MS.gene055224 | MS.gene98170 | 0.80159 | 8.38E-49 | -1.69E-46 |
| MS.gene055254 | MS.gene98170 | 0.821783 | 3.36E-53 | -1.69E-46 |
| MS.gene055277 | MS.gene98170 | 0.824576 | 7.49E-54 | -1.69E-46 |
| MS.gene055289 | MS.gene98170 | 0.814787 | 1.29E-51 | -1.69E-46 |
| MS.gene055397 | MS.gene98170 | 0.807763 | 4.31E-50 | -1.69E-46 |
| MS.gene055499 | MS.gene98170 | 0.823573 | 1.29E-53 | -1.69E-46 |
| MS.gene055577 | MS.gene98170 | 0.822893 | 1.86E-53 | -1.69E-46 |
| MS.gene055636 | MS.gene98170 | 0.802537 | 5.35E-49 | -1.69E-46 |
| MS.gene055647 | MS.gene98170 | 0.800559 | 1.36E-48 | -1.69E-46 |
| MS.gene055722 | MS.gene98170 | 0.867158 | 1.68E-65 | -1.69E-46 |
| MS.gene05592 | MS.gene98170 | 0.897544 | 1.27E-76 | -1.69E-46 |
| MS.gene055941 | MS.gene98170 | 0.823608 | 1.26E-53 | -1.69E-46 |
| MS.gene056083 | MS.gene98170 | 0.827437 | 1.57E-54 | -1.69E-46 |
| MS.gene056410 | MS.gene98170 | 0.842825 | 2.04E-58 | -1.69E-46 |
| MS.gene056448 | MS.gene98170 | 0.803667 | 3.12E-49 | -1.69E-46 |
| MS.gene056511 | MS.gene98170 | 0.820015 | 8.58E-53 | -1.69E-46 |
| MS.gene056609 | MS.gene98170 | 0.8433 | 1.53E-58 | -1.69E-46 |
| MS.gene056796 | MS.gene98170 | 0.814771 | 1.30E-51 | -1.69E-46 |
| MS.gene056897 | MS.gene98170 | 0.850963 | 1.21E-60 | -1.69E-46 |
| MS.gene057011 | MS.gene98170 | 0.800551 | 1.37E-48 | -1.69E-46 |
| MS.gene057076 | MS.gene98170 | 0.821748 | 3.42E-53 | -1.69E-46 |
| MS.gene057124 | MS.gene98170 | 0.804948 | 1.69E-49 | -1.69E-46 |
| MS.gene057129 | MS.gene98170 | 0.838379 | 2.98E-57 | -1.69E-46 |
| MS.gene057331 | MS.gene98170 | 0.860107 | 2.60E-63 | -1.69E-46 |
| MS.gene05735 | MS.gene98170 | 0.802658 | 5.05E-49 | -1.69E-46 |
| MS.gene057416 | MS.gene98170 | 0.831663 | 1.47E-55 | -1.69E-46 |
| MS.gene057926 | MS.gene98170 | 0.837514 | 4.97E-57 | -1.69E-46 |
| MS.gene058006 | MS.gene98170 | 0.825024 | 5.87E-54 | -1.69E-46 |
| MS.gene058082 | MS.gene98170 | 0.846466 | 2.13E-59 | -1.69E-46 |
| MS.gene058130 | MS.gene98170 | 0.802512 | 5.42E-49 | -1.69E-46 |
| MS.gene058293 | MS.gene98170 | 0.80693 | 6.47E-50 | -1.69E-46 |
| MS.gene058323 | MS.gene98170 | 0.841097 | 5.84E-58 | -1.69E-46 |
| MS.gene058588 | MS.gene98170 | 0.802236 | 6.17E-49 | -1.69E-46 |
| MS.gene058660 | MS.gene98170 | 0.81091 | 9.11E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene98170 | 0.834141 | 3.56E-56 | -1.69E-46 |
| MS.gene058748 | MS.gene98170 | 0.806115 | 9.62E-50 | -1.69E-46 |
| MS.gene058773 | MS.gene98170 | 0.823885 | 1.09E-53 | -1.69E-46 |
| MS.gene059029 | MS.gene98170 | 0.835866 | 1.31E-56 | -1.69E-46 |
| MS.gene05913 | MS.gene98170 | 0.818453 | 1.95E-52 | -1.69E-46 |
| MS.gene059326 | MS.gene98170 | 0.813753 | 2.18E-51 | -1.69E-46 |
| MS.gene05934 | MS.gene98170 | 0.805658 | 1.20E-49 | -1.69E-46 |
| MS.gene059366 | MS.gene98170 | 0.808804 | 2.59E-50 | -1.69E-46 |
| MS.gene059536 | MS.gene98170 | 0.854931 | 8.86E-62 | -1.69E-46 |
| MS.gene059676 | MS.gene98170 | 0.823535 | 1.31E-53 | -1.69E-46 |
| MS.gene059688 | MS.gene98170 | 0.84678 | 1.75E-59 | -1.69E-46 |
| MS.gene059692 | MS.gene98170 | 0.847586 | 1.05E-59 | -1.69E-46 |
| MS.gene059695 | MS.gene98170 | 0.846082 | 2.72E-59 | -1.69E-46 |
| MS.gene059711 | MS.gene98170 | 0.82866 | 7.95E-55 | -1.69E-46 |
| MS.gene059718 | MS.gene98170 | 0.822412 | 2.40E-53 | -1.69E-46 |
| MS.gene059902 | MS.gene98170 | 0.857872 | 1.21E-62 | -1.69E-46 |
| MS.gene059960 | MS.gene98170 | 0.832447 | 9.41E-56 | -1.69E-46 |
| MS.gene059974 | MS.gene98170 | 0.80429 | 2.32E-49 | -1.69E-46 |
| MS.gene060193 | MS.gene98170 | 0.816456 | 5.48E-52 | -1.69E-46 |
| MS.gene060804 | MS.gene98170 | 0.859838 | 3.14E-63 | -1.69E-46 |
| MS.gene060818 | MS.gene98170 | 0.851124 | 1.09E-60 | -1.69E-46 |
| MS.gene060835 | MS.gene98170 | 0.810508 | 1.11E-50 | -1.69E-46 |
| MS.gene060837 | MS.gene98170 | 0.8552 | 7.40E-62 | -1.69E-46 |
| MS.gene06092 | MS.gene98170 | 0.81606 | 6.72E-52 | -1.69E-46 |
| MS.gene061041 | MS.gene98170 | 0.842864 | 1.99E-58 | -1.69E-46 |
| MS.gene061051 | MS.gene98170 | -0.809525 | 1.81E-50 | -1.69E-46 |
| MS.gene061150 | MS.gene98170 | 0.811079 | 8.38E-51 | -1.69E-46 |
| MS.gene061154 | MS.gene98170 | 0.801656 | 8.13E-49 | -1.69E-46 |
| MS.gene061200 | MS.gene98170 | 0.827265 | 1.72E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene98170 | MS.gene051949 | PPI |
| MS.gene98170 | MS.gene049066 | PPI |
| MS.gene98170 | MS.gene85223 | PPI |
| MS.gene98170 | MS.gene057011 | PPI |
| MS.gene98170 | MS.gene003315 | PPI |
| MS.gene98170 | MS.gene05985 | PPI |
| MS.gene98170 | MS.gene47905 | PPI |
| MS.gene98170 | MS.gene015821 | PPI |
| MS.gene98170 | MS.gene76149 | PPI |
| MS.gene98170 | MS.gene74531 | PPI |
| MS.gene98170 | MS.gene02110 | PPI |
| MS.gene98170 | MS.gene03058 | PPI |
| MS.gene98170 | MS.gene030927 | PPI |
| MS.gene67218 | MS.gene98170 | PPI |
| MS.gene98170 | MS.gene27946 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98170.t1 | MTR_8g028120 | 99.648 | 284 | 1 | 0 | 1 | 284 | 1 | 284 | 0.0 | 571 |
| MS.gene98170.t1 | MTR_2g099910 | 56.690 | 284 | 122 | 1 | 2 | 284 | 47 | 330 | 1.55e-111 | 326 |
| MS.gene98170.t1 | MTR_2g099910 | 56.863 | 204 | 87 | 1 | 2 | 204 | 47 | 250 | 2.84e-76 | 233 |
| MS.gene98170.t1 | MTR_2g099910 | 57.062 | 177 | 75 | 1 | 2 | 177 | 47 | 223 | 6.99e-65 | 203 |
| MS.gene98170.t1 | MTR_8g102470 | 30.000 | 280 | 193 | 3 | 2 | 279 | 13 | 291 | 1.62e-40 | 142 |
| MS.gene98170.t1 | MTR_8g102470 | 30.000 | 280 | 193 | 3 | 2 | 279 | 37 | 315 | 2.30e-40 | 143 |
| MS.gene98170.t1 | MTR_8g088900 | 29.391 | 279 | 190 | 4 | 2 | 274 | 15 | 292 | 1.16e-33 | 126 |
| MS.gene98170.t1 | MTR_2g030400 | 28.283 | 297 | 193 | 4 | 2 | 278 | 41 | 337 | 2.85e-26 | 106 |
| MS.gene98170.t1 | MTR_2g030400 | 31.818 | 220 | 137 | 3 | 2 | 208 | 41 | 260 | 6.18e-26 | 103 |
| MS.gene98170.t1 | MTR_2g030400 | 31.818 | 220 | 137 | 3 | 2 | 208 | 41 | 260 | 8.75e-26 | 103 |
| MS.gene98170.t1 | MTR_2g030400 | 31.818 | 220 | 137 | 3 | 2 | 208 | 41 | 260 | 1.16e-25 | 103 |
| MS.gene98170.t1 | MTR_6g069685 | 26.962 | 293 | 199 | 6 | 2 | 283 | 326 | 614 | 4.05e-20 | 90.5 |
| MS.gene98170.t1 | MTR_6g069685 | 25.461 | 271 | 181 | 5 | 3 | 261 | 7 | 268 | 2.16e-16 | 79.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98170.t1 | AT3G25530 | 82.105 | 285 | 50 | 1 | 1 | 284 | 1 | 285 | 4.43e-173 | 479 |
| MS.gene98170.t1 | AT3G25530 | 78.521 | 284 | 51 | 1 | 1 | 284 | 1 | 274 | 3.63e-164 | 457 |
| MS.gene98170.t1 | AT3G25530 | 81.463 | 205 | 37 | 1 | 1 | 204 | 1 | 205 | 2.82e-122 | 348 |
| MS.gene98170.t1 | AT1G17650 | 57.895 | 285 | 119 | 1 | 1 | 284 | 8 | 292 | 2.07e-113 | 329 |
| MS.gene98170.t1 | AT1G17650 | 57.895 | 285 | 119 | 1 | 1 | 284 | 67 | 351 | 6.53e-113 | 330 |
| MS.gene98170.t1 | AT4G29120 | 31.071 | 280 | 190 | 3 | 2 | 279 | 39 | 317 | 1.13e-38 | 139 |
| MS.gene98170.t1 | AT4G20930 | 32.886 | 298 | 178 | 6 | 3 | 279 | 40 | 336 | 8.44e-32 | 120 |
| MS.gene98170.t1 | AT1G18270 | 29.392 | 296 | 188 | 8 | 2 | 283 | 323 | 611 | 1.04e-24 | 104 |
| MS.gene98170.t1 | AT1G18270 | 24.364 | 275 | 203 | 4 | 3 | 273 | 5 | 278 | 6.29e-16 | 78.6 |
| MS.gene98170.t1 | AT1G18270 | 29.392 | 296 | 188 | 8 | 2 | 283 | 324 | 612 | 1.04e-24 | 104 |
| MS.gene98170.t1 | AT1G18270 | 24.275 | 276 | 203 | 5 | 3 | 273 | 5 | 279 | 2.23e-14 | 73.9 |
| MS.gene98170.t1 | AT1G18270 | 29.392 | 296 | 188 | 8 | 2 | 283 | 323 | 611 | 1.10e-24 | 104 |
| MS.gene98170.t1 | AT1G18270 | 24.364 | 275 | 203 | 4 | 3 | 273 | 5 | 278 | 6.08e-16 | 78.6 |
| MS.gene98170.t1 | AT1G18270 | 29.392 | 296 | 188 | 8 | 2 | 283 | 323 | 611 | 1.21e-24 | 103 |
| MS.gene98170.t1 | AT1G18270 | 24.364 | 275 | 203 | 4 | 3 | 273 | 5 | 278 | 6.19e-16 | 78.6 |
| MS.gene98170.t1 | AT4G20930 | 31.298 | 262 | 158 | 6 | 39 | 279 | 4 | 264 | 8.37e-23 | 95.1 |
| MS.gene98170.t1 | AT1G71170 | 26.103 | 272 | 195 | 3 | 14 | 284 | 27 | 293 | 5.70e-19 | 85.1 |
| MS.gene98170.t1 | AT1G71180 | 25.862 | 232 | 170 | 2 | 9 | 239 | 43 | 273 | 4.43e-16 | 77.4 |
Find 74 sgRNAs with CRISPR-Local
Find 209 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGGAAAGAAATCTTTCTTTC+TGG | 0.164012 | 8.2:-69056080 | MS.gene98170:CDS |
| ATTTCTGGGTTTGGGAATAA+TGG | 0.251931 | 8.2:-69058548 | MS.gene98170:CDS |
| TTTAAACATGCCGTTACTTA+TGG | 0.260989 | 8.2:+69055342 | None:intergenic |
| TTTCTTGAAGCTCCTGTTTC+GGG | 0.271355 | 8.2:-69057427 | MS.gene98170:CDS |
| GTCTCCCAACCCCATGCTTC+TGG | 0.280528 | 8.2:+69054878 | None:intergenic |
| GGTGTTCTTGAGCAAATTAA+TGG | 0.309456 | 8.2:-69058034 | MS.gene98170:CDS |
| CTTTCTTGAAGCTCCTGTTT+CGG | 0.310097 | 8.2:-69057428 | MS.gene98170:CDS |
| GGAAAGAAATCTTTCTTTCT+GGG | 0.319830 | 8.2:-69056079 | MS.gene98170:CDS |
| GAGATTGGATTTCTGGGTTT+GGG | 0.342752 | 8.2:-69058556 | MS.gene98170:CDS |
| ATCCGATCCTGCAGCTGCTT+TGG | 0.356413 | 8.2:-69058164 | MS.gene98170:CDS |
| GGAGATTGGATTTCTGGGTT+TGG | 0.359602 | 8.2:-69058557 | MS.gene98170:CDS |
| TTTCTGGGTTTGGGAATAAT+GGG | 0.387707 | 8.2:-69058547 | MS.gene98170:CDS |
| CTTTGAAGCCATGGCGTAGA+AGG | 0.398102 | 8.2:+69058506 | None:intergenic |
| TTTCTGGGTGAGGTTGGAAA+TGG | 0.402461 | 8.2:-69056064 | MS.gene98170:CDS |
| CTTGTTGTCAACATGGTAAT+GGG | 0.402762 | 8.2:-69056028 | MS.gene98170:CDS |
| ATGGCTTCAAAGTCACTGTT+TGG | 0.409650 | 8.2:-69058495 | MS.gene98170:CDS |
| CTTGAGCAAATTAATGGAAA+AGG | 0.410887 | 8.2:-69058028 | MS.gene98170:CDS |
| TTGGAACAGAACCCTCTCTA+AGG | 0.431030 | 8.2:-69058476 | MS.gene98170:intron |
| GCTGCAGCTGCGACAGGCAT+TGG | 0.436252 | 8.2:+69055211 | None:intergenic |
| AAAATGGAGATTGGATTTCT+GGG | 0.442385 | 8.2:-69058562 | MS.gene98170:CDS |
| TCATTTGCTGCAGCTGCGAC+AGG | 0.445970 | 8.2:+69055205 | None:intergenic |
| GAAATCTTTCTTTCTGGGTG+AGG | 0.451195 | 8.2:-69056074 | MS.gene98170:CDS |
| CGCCAAAGCAGCTGCAGGAT+CGG | 0.451480 | 8.2:+69058162 | None:intergenic |
| TCTTTCTTTCTGGGTGAGGT+TGG | 0.457974 | 8.2:-69056070 | MS.gene98170:CDS |
| GGCTTCTTACTACCCGAAAC+AGG | 0.467901 | 8.2:+69057415 | None:intergenic |
| CGATCCTGCAGCTGCTTTGG+CGG | 0.468605 | 8.2:-69058161 | MS.gene98170:intron |
| AACGGCATGTTTAAATTGAA+AGG | 0.477158 | 8.2:-69055334 | MS.gene98170:CDS |
| ATGAGACTGGCTCTTGCCCT+TGG | 0.477610 | 8.2:-69055250 | MS.gene98170:CDS |
| AAAGCCAGAAGCATGGGGTT+GGG | 0.482519 | 8.2:-69054882 | MS.gene98170:CDS |
| CTGACCGCCAAAGCAGCTGC+AGG | 0.484117 | 8.2:+69058157 | None:intergenic |
| ACTAGTTGGCCATCTTCTGC+AGG | 0.484133 | 8.2:+69057394 | None:intergenic |
| TTCAAGAAAGCCAGAAGCAT+GGG | 0.486636 | 8.2:-69054888 | MS.gene98170:CDS |
| TGATGTTTCAGTGGAAAAGC+AGG | 0.487430 | 8.2:+69055283 | None:intergenic |
| GAAAGCCAGAAGCATGGGGT+TGG | 0.500182 | 8.2:-69054883 | MS.gene98170:CDS |
| ACTTGTTGTCAACATGGTAA+TGG | 0.503001 | 8.2:-69056029 | MS.gene98170:CDS |
| CTGATTGTAGTGTGATGAAC+TGG | 0.507267 | 8.2:-69058260 | MS.gene98170:intron |
| AGTAAGAAGCCTGCAGAAGA+TGG | 0.513694 | 8.2:-69057403 | MS.gene98170:CDS |
| TTTCCGAGTACATCAAATGC+TGG | 0.514724 | 8.2:+69056097 | None:intergenic |
| CTTCCAGCATTTGATGTACT+CGG | 0.515625 | 8.2:-69056100 | MS.gene98170:CDS |
| TAGGTTGTGTTTGATAAGGA+TGG | 0.515687 | 8.2:-69058055 | MS.gene98170:CDS |
| TAGCACACTTCTTGATGTGC+TGG | 0.519966 | 8.2:-69055452 | MS.gene98170:intron |
| CACTTCTTGACAACAGCCGC+AGG | 0.522756 | 8.2:+69058208 | None:intergenic |
| CTACAGGCAATCAAAGCAAA+AGG | 0.523095 | 8.2:-69057457 | MS.gene98170:intron |
| TGTCGCAGCTGCAGCAAATG+AGG | 0.525255 | 8.2:-69055203 | MS.gene98170:intron |
| CGGCAGCAAGTATAACTAGT+TGG | 0.527224 | 8.2:+69057380 | None:intergenic |
| AGATATCTTGATAGATGTCT+CGG | 0.547408 | 8.2:+69057979 | None:intergenic |
| ATGATGAATGCTTTCTCTGA+GGG | 0.550025 | 8.2:-69055508 | MS.gene98170:CDS |
| AAACAGTGACTTTGAAGCCA+TGG | 0.555473 | 8.2:+69058497 | None:intergenic |
| AGCACATCAAGAAGTGTGCT+AGG | 0.569454 | 8.2:+69055454 | None:intergenic |
| TCCTTCTGCTGATGTTTCAG+TGG | 0.571359 | 8.2:+69055274 | None:intergenic |
| TAGGTTATGTACCTTAGAGA+GGG | 0.578481 | 8.2:+69058465 | None:intergenic |
| ATTCAAGAAAGCCAGAAGCA+TGG | 0.581643 | 8.2:-69054889 | MS.gene98170:CDS |
| GATCTTGGGGCCATAAGTAA+CGG | 0.585908 | 8.2:-69055352 | MS.gene98170:CDS |
| TCAATTAACCTTCTACGCCA+TGG | 0.586100 | 8.2:-69058514 | MS.gene98170:CDS |
| TTAGGTTATGTACCTTAGAG+AGG | 0.588459 | 8.2:+69058464 | None:intergenic |
| GTGGAACATGGTGCTTCAGT+TGG | 0.589772 | 8.2:-69058238 | MS.gene98170:CDS |
| GCGTAGAAGGTTAATTGACA+TGG | 0.590455 | 8.2:+69058519 | None:intergenic |
| TCCACTGAAACATCAGCAGA+AGG | 0.591596 | 8.2:-69055275 | MS.gene98170:CDS |
| CAACTAGTTATACTTGCTGC+CGG | 0.591719 | 8.2:-69057379 | MS.gene98170:CDS |
| CTGACACTTGCTGAAAGAAG+TGG | 0.597037 | 8.2:-69055484 | MS.gene98170:CDS |
| TCAGCAGAAGGACATGAGAC+TGG | 0.601633 | 8.2:-69055263 | MS.gene98170:CDS |
| TATACTTGCTGCCGGAGACA+AGG | 0.610187 | 8.2:-69057371 | MS.gene98170:intron |
| GATGTTTCAGTGGAAAAGCA+GGG | 0.610233 | 8.2:+69055284 | None:intergenic |
| AATGAAACTTGTTGTCAACA+TGG | 0.623343 | 8.2:-69056035 | MS.gene98170:CDS |
| GCACATCAAGAAGTGTGCTA+GGG | 0.636852 | 8.2:+69055455 | None:intergenic |
| TTGTCAACATGGTAATGGGA+AGG | 0.637666 | 8.2:-69056024 | MS.gene98170:intron |
| TATGATGAATGCTTTCTCTG+AGG | 0.646238 | 8.2:-69055509 | MS.gene98170:CDS |
| GACATCTATCAAGATATCTG+AGG | 0.651310 | 8.2:-69057975 | MS.gene98170:intron |
| ATTGTAGTGTGATGAACTGG+TGG | 0.655662 | 8.2:-69058257 | MS.gene98170:intron |
| TGTGATGAACTGGTGGAACA+TGG | 0.661566 | 8.2:-69058250 | MS.gene98170:CDS |
| ATGTTTCAGTGGAAAAGCAG+GGG | 0.666554 | 8.2:+69055285 | None:intergenic |
| CAGGCAATCAAAGCAAAAGG+TGG | 0.667806 | 8.2:-69057454 | MS.gene98170:CDS |
| TCAAGAAAGCCAGAAGCATG+GGG | 0.690032 | 8.2:-69054887 | MS.gene98170:CDS |
| TTCAGTTGGAGAAACACCTG+CGG | 0.737303 | 8.2:-69058224 | MS.gene98170:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGTTATTTATCAAAAACA+CGG | + | chr8.2:69057513-69057532 | None:intergenic | 15.0% |
| !!! | ATTGAAAGTTTCTATTTTTA+GGG | - | chr8.2:69055543-69055562 | MS.gene98170:intron | 15.0% |
| !! | ATTCTCAGAATGTTAATAAA+AGG | + | chr8.2:69058009-69058028 | None:intergenic | 20.0% |
| !! | CCATATAAATTAAATTTCAG+TGG | - | chr8.2:69057242-69057261 | MS.gene98170:intron | 20.0% |
| !! | CTAAAAATAGAAACTTTCAA+TGG | + | chr8.2:69055544-69055563 | None:intergenic | 20.0% |
| !! | CTAATCTGAATTTATCTAAT+AGG | + | chr8.2:69057742-69057761 | None:intergenic | 20.0% |
| !! | GAAAATAAAGTTGTTAGAAA+AGG | - | chr8.2:69056479-69056498 | MS.gene98170:intron | 20.0% |
| !! | TAAGTTGCAATTTATATCAA+AGG | + | chr8.2:69055908-69055927 | None:intergenic | 20.0% |
| !! | TATAAATTAAATTTCAGTGG+TGG | - | chr8.2:69057245-69057264 | MS.gene98170:intron | 20.0% |
| !! | TTCAATAATGCAATCTAAAA+TGG | + | chr8.2:69056431-69056450 | None:intergenic | 20.0% |
| !! | TTTAGATTGCATTATTGAAA+AGG | - | chr8.2:69056432-69056451 | MS.gene98170:intron | 20.0% |
| !!! | ATATCTGTGATATTTTTTGA+AGG | - | chr8.2:69058027-69058046 | MS.gene98170:CDS | 20.0% |
| !!! | CATTGAAAGTTTCTATTTTT+AGG | - | chr8.2:69055542-69055561 | MS.gene98170:intron | 20.0% |
| !!! | CCACTGAAATTTAATTTATA+TGG | + | chr8.2:69057245-69057264 | None:intergenic | 20.0% |
| !!! | TGCAGTTATTATTTTGAATT+TGG | - | chr8.2:69055518-69055537 | MS.gene98170:intron | 20.0% |
| !!! | TTGTAGTTTTTCAATTTCAA+CGG | + | chr8.2:69057207-69057226 | None:intergenic | 20.0% |
| ! | AAAGAAATACTTCAGATAGA+AGG | + | chr8.2:69056220-69056239 | None:intergenic | 25.0% |
| ! | AGAGAGTAGATTTATTGTAT+AGG | + | chr8.2:69057137-69057156 | None:intergenic | 25.0% |
| ! | AGTAGATTTATTGTATAGGA+GGG | + | chr8.2:69057133-69057152 | None:intergenic | 25.0% |
| ! | ATACAATAAATCTACTCTCT+AGG | - | chr8.2:69057137-69057156 | MS.gene98170:intron | 25.0% |
| ! | ATTTAAAAATACCTTGTCTC+CGG | + | chr8.2:69056044-69056063 | None:intergenic | 25.0% |
| ! | CATAAGCTTTCATATGATAA+AGG | - | chr8.2:69056915-69056934 | MS.gene98170:intron | 25.0% |
| ! | CGCATGTATATATTATAATG+AGG | - | chr8.2:69058253-69058272 | MS.gene98170:CDS | 25.0% |
| ! | CTAAAATATTCAACACGAAA+CGG | + | chr8.2:69055329-69055348 | None:intergenic | 25.0% |
| ! | CTTTATCATATGAAAGCTTA+TGG | + | chr8.2:69056917-69056936 | None:intergenic | 25.0% |
| ! | GAATTGAACCAATTTAAACA+AGG | + | chr8.2:69056640-69056659 | None:intergenic | 25.0% |
| ! | GCATATATTCAAACATTCTA+CGG | + | chr8.2:69055704-69055723 | None:intergenic | 25.0% |
| ! | GCATATTAGCATTTCTTATT+TGG | - | chr8.2:69057794-69057813 | MS.gene98170:intron | 25.0% |
| ! | GTAACTATATTTGCATATCA+AGG | - | chr8.2:69055813-69055832 | MS.gene98170:intron | 25.0% |
| ! | GTCTGTTGAAAGTTATTTAA+TGG | - | chr8.2:69058286-69058305 | MS.gene98170:intron | 25.0% |
| ! | TAATGAGATGACAATAAATG+TGG | - | chr8.2:69056309-69056328 | MS.gene98170:intron | 25.0% |
| ! | TAATTCTCGCATTCAAAATT+AGG | + | chr8.2:69055647-69055666 | None:intergenic | 25.0% |
| ! | TACGTCTCTTCTATATAAAA+GGG | + | chr8.2:69056850-69056869 | None:intergenic | 25.0% |
| ! | TCATTACAGTTTAGTCTATT+TGG | + | chr8.2:69057068-69057087 | None:intergenic | 25.0% |
| ! | TGAATCAGAAAACAAGAAAA+TGG | - | chr8.2:69057487-69057506 | MS.gene98170:intron | 25.0% |
| ! | TTAAAATGAAATCGAAAAGC+TGG | + | chr8.2:69056568-69056587 | None:intergenic | 25.0% |
| ! | TTAAGTACGAGAAAACAAAT+CGG | + | chr8.2:69055303-69055322 | None:intergenic | 25.0% |
| ! | TTTCTTTATAGAACTACTTG+TGG | - | chr8.2:69055070-69055089 | MS.gene98170:intron | 25.0% |
| !! | CTGCAATAAATCACATATTT+TGG | + | chr8.2:69055503-69055522 | None:intergenic | 25.0% |
| !! | TATCTGATAGTCACATATTT+TGG | + | chr8.2:69058418-69058437 | None:intergenic | 25.0% |
| !! | TATTTCTTTAAGTTCCCAAA+AGG | - | chr8.2:69056231-69056250 | MS.gene98170:intron | 25.0% |
| !!! | AGATTGCATGTCTTTATTTT+CGG | - | chr8.2:69057826-69057845 | MS.gene98170:intron | 25.0% |
| !!! | ATATTTTTTGAAGGATCTTG+GGG | - | chr8.2:69058036-69058055 | MS.gene98170:CDS | 25.0% |
| !!! | ATGATAATCGACTTTTCAAA+TGG | - | chr8.2:69055868-69055887 | MS.gene98170:intron | 25.0% |
| !!! | ATTTTAGGTTGTGTTTGATA+AGG | - | chr8.2:69055342-69055361 | MS.gene98170:CDS | 25.0% |
| !!! | GATATTTTTTGAAGGATCTT+GGG | - | chr8.2:69058035-69058054 | MS.gene98170:CDS | 25.0% |
| !!! | TAACTGTTTTTAAGCATTGT+TGG | + | chr8.2:69058094-69058113 | None:intergenic | 25.0% |
| !!! | TGATATTTTTTGAAGGATCT+TGG | - | chr8.2:69058034-69058053 | MS.gene98170:CDS | 25.0% |
| !!! | TGCTTAAGTAAGTTTTGTAT+TGG | - | chr8.2:69055043-69055062 | MS.gene98170:intron | 25.0% |
| AACGGCATGTTTAAATTGAA+AGG | - | chr8.2:69058067-69058086 | MS.gene98170:intron | 30.0% | |
| ACAAATCATGTACAGTAATC+AGG | + | chr8.2:69057110-69057129 | None:intergenic | 30.0% | |
| ACATCAAGGATAAATTTAGC+AGG | + | chr8.2:69055272-69055291 | None:intergenic | 30.0% | |
| ACCGCATAAATACAATTACA+AGG | + | chr8.2:69056793-69056812 | None:intergenic | 30.0% | |
| ACTAAGTTGCTATACAGTAA+CGG | + | chr8.2:69056668-69056687 | None:intergenic | 30.0% | |
| ACTTAGTCAAAGAAATGTAG+TGG | + | chr8.2:69055763-69055782 | None:intergenic | 30.0% | |
| ACTTCCAAATTATGAACAGA+AGG | + | chr8.2:69057424-69057443 | None:intergenic | 30.0% | |
| AGAAATGCTAATATGCAATC+TGG | + | chr8.2:69057790-69057809 | None:intergenic | 30.0% | |
| AGATATCTTGATAGATGTCT+CGG | + | chr8.2:69055425-69055444 | None:intergenic | 30.0% | |
| ATATGCAATCTGGATGAATT+TGG | + | chr8.2:69057780-69057799 | None:intergenic | 30.0% | |
| CTACGTCTCTTCTATATAAA+AGG | + | chr8.2:69056851-69056870 | None:intergenic | 30.0% | |
| CTCTTCTATATAAAAGGGAA+CGG | + | chr8.2:69056845-69056864 | None:intergenic | 30.0% | |
| CTTGAGCAAATTAATGGAAA+AGG | - | chr8.2:69055373-69055392 | MS.gene98170:intron | 30.0% | |
| GAAAATAAAGACATGCAATC+TGG | + | chr8.2:69057827-69057846 | None:intergenic | 30.0% | |
| GAGTAGATTTATTGTATAGG+AGG | + | chr8.2:69057134-69057153 | None:intergenic | 30.0% | |
| GCCTTGTAATTGTATTTATG+CGG | - | chr8.2:69056789-69056808 | MS.gene98170:intron | 30.0% | |
| GGAAAGAAATCTTTCTTTCT+GGG | - | chr8.2:69057322-69057341 | MS.gene98170:intron | 30.0% | |
| GGAAATATGAAAACATCCTA+TGG | - | chr8.2:69057666-69057685 | MS.gene98170:intron | 30.0% | |
| TAAAGTTTGAACTCGTTTGT+AGG | - | chr8.2:69058488-69058507 | MS.gene98170:CDS | 30.0% | |
| TATGCAATCTGGATGAATTT+GGG | + | chr8.2:69057779-69057798 | None:intergenic | 30.0% | |
| TCTGTTCATAATTTGGAAGT+AGG | - | chr8.2:69057424-69057443 | MS.gene98170:CDS | 30.0% | |
| TGAACCAATTTAAACAAGGT+TGG | + | chr8.2:69056636-69056655 | None:intergenic | 30.0% | |
| TGTATTTATGCGGTTATAGT+AGG | - | chr8.2:69056799-69056818 | MS.gene98170:intron | 30.0% | |
| TTATGAACAGAAGGAGAAAA+CGG | + | chr8.2:69057415-69057434 | None:intergenic | 30.0% | |
| TTCATAATTTGGAAGTAGGA+AGG | - | chr8.2:69057428-69057447 | MS.gene98170:CDS | 30.0% | |
| TTCTCCTTCTGTTCATAATT+TGG | - | chr8.2:69057417-69057436 | MS.gene98170:CDS | 30.0% | |
| TTGTAGCATTCATAGTTAGA+TGG | - | chr8.2:69058359-69058378 | MS.gene98170:intron | 30.0% | |
| TTTAAACATGCCGTTACTTA+TGG | + | chr8.2:69058062-69058081 | None:intergenic | 30.0% | |
| ! | AATGCCAACCTTGTTTAAAT+TGG | - | chr8.2:69056629-69056648 | MS.gene98170:intron | 30.0% |
| ! | ATAGTACTGGAGATTATGTT+TGG | - | chr8.2:69055589-69055608 | MS.gene98170:intron | 30.0% |
| ! | ATTCCAGTGTATTTCCTTTT+GGG | + | chr8.2:69056248-69056267 | None:intergenic | 30.0% |
| ! | CGTTTCGTGTTGAATATTTT+AGG | - | chr8.2:69055327-69055346 | MS.gene98170:CDS | 30.0% |
| ! | TAATGCAATCTAAAATGGAC+TGG | + | chr8.2:69056426-69056445 | None:intergenic | 30.0% |
| !! | AATGAAACTTGTTGTCAACA+TGG | - | chr8.2:69057366-69057385 | MS.gene98170:intron | 30.0% |
| !! | ATCGACTTTTCAAATGGAAT+TGG | - | chr8.2:69055874-69055893 | MS.gene98170:intron | 30.0% |
| AAAACACACACTCGTTTGAA+AGG | + | chr8.2:69056190-69056209 | None:intergenic | 35.0% | |
| ATATTCAAACATTCTACGGC+AGG | + | chr8.2:69055700-69055719 | None:intergenic | 35.0% | |
| ATGATGAATGCTTTCTCTGA+GGG | - | chr8.2:69057893-69057912 | MS.gene98170:intron | 35.0% | |
| CATGTAAAATGCAAACTACC+AGG | + | chr8.2:69055851-69055870 | None:intergenic | 35.0% | |
| CGGAAAGAAATCTTTCTTTC+TGG | - | chr8.2:69057321-69057340 | MS.gene98170:intron | 35.0% | |
| GAATAGTGCAACTCTCTAAA+TGG | + | chr8.2:69056128-69056147 | None:intergenic | 35.0% | |
| GACATCTATCAAGATATCTG+AGG | - | chr8.2:69055426-69055445 | MS.gene98170:intron | 35.0% | |
| GGCAAGTATAACACTTCAAA+TGG | + | chr8.2:69056896-69056915 | None:intergenic | 35.0% | |
| GGTGTTCTTGAGCAAATTAA+TGG | - | chr8.2:69055367-69055386 | MS.gene98170:intron | 35.0% | |
| GTTAGAAAAGGATGTTGAAG+AGG | - | chr8.2:69056491-69056510 | MS.gene98170:intron | 35.0% | |
| TAGGTTATGTACCTTAGAGA+GGG | + | chr8.2:69054939-69054958 | None:intergenic | 35.0% | |
| TAGGTTGTGTTTGATAAGGA+TGG | - | chr8.2:69055346-69055365 | MS.gene98170:CDS | 35.0% | |
| TATGAACAGAAGGAGAAAAC+GGG | + | chr8.2:69057414-69057433 | None:intergenic | 35.0% | |
| TATGATGAATGCTTTCTCTG+AGG | - | chr8.2:69057892-69057911 | MS.gene98170:intron | 35.0% | |
| TATGTGAACATTGCCGTAAT+AGG | - | chr8.2:69056953-69056972 | MS.gene98170:intron | 35.0% | |
| TGAGAGAGAAATGGAACAAT+TGG | - | chr8.2:69056691-69056710 | MS.gene98170:intron | 35.0% | |
| TGAGGACAATGATAAAAGCT+GGG | + | chr8.2:69057179-69057198 | None:intergenic | 35.0% | |
| TTACAAGGCATACAATTGCA+AGG | + | chr8.2:69056778-69056797 | None:intergenic | 35.0% | |
| TTAGGTTATGTACCTTAGAG+AGG | + | chr8.2:69054940-69054959 | None:intergenic | 35.0% | |
| TTCGATTAAAGCCTAATGAG+AGG | + | chr8.2:69057018-69057037 | None:intergenic | 35.0% | |
| TTCTATATAAAAGGGAACGG+TGG | + | chr8.2:69056842-69056861 | None:intergenic | 35.0% | |
| TTTCTGGGTTTGGGAATAAT+GGG | - | chr8.2:69054854-69054873 | MS.gene98170:CDS | 35.0% | |
| TTTGATTGCCTGTAGAAAGT+AGG | + | chr8.2:69055939-69055958 | None:intergenic | 35.0% | |
| ! | ATTTCTGGGTTTGGGAATAA+TGG | - | chr8.2:69054853-69054872 | MS.gene98170:CDS | 35.0% |
| ! | CTCATTAGGCTTTAATCGAA+GGG | - | chr8.2:69057018-69057037 | MS.gene98170:intron | 35.0% |
| ! | CTTGTTGTCAACATGGTAAT+GGG | - | chr8.2:69057373-69057392 | MS.gene98170:CDS | 35.0% |
| ! | GATTCCAGTGTATTTCCTTT+TGG | + | chr8.2:69056249-69056268 | None:intergenic | 35.0% |
| ! | TACAGCATTTTCATCTCCAA+GGG | + | chr8.2:69058170-69058189 | None:intergenic | 35.0% |
| ! | TCTCATTAGGCTTTAATCGA+AGG | - | chr8.2:69057017-69057036 | MS.gene98170:intron | 35.0% |
| !! | ACTTGTTGTCAACATGGTAA+TGG | - | chr8.2:69057372-69057391 | MS.gene98170:CDS | 35.0% |
| !! | AGTCACGTGACTTTTTAAAG+TGG | + | chr8.2:69058327-69058346 | None:intergenic | 35.0% |
| !! | CTTAGTTTGTGAGAGAGAAA+TGG | - | chr8.2:69056682-69056701 | MS.gene98170:intron | 35.0% |
| AAGATCTGCCTACTTTCTAC+AGG | - | chr8.2:69055928-69055947 | MS.gene98170:intron | 40.0% | |
| AGAAAAGGATGTTGAAGAGG+AGG | - | chr8.2:69056494-69056513 | MS.gene98170:intron | 40.0% | |
| AGAGCTATTGACATGTCCAT+AGG | + | chr8.2:69057685-69057704 | None:intergenic | 40.0% | |
| ATGAACAGAAGGAGAAAACG+GGG | + | chr8.2:69057413-69057432 | None:intergenic | 40.0% | |
| ATGGCTTCAAAGTCACTGTT+TGG | - | chr8.2:69054906-69054925 | MS.gene98170:intron | 40.0% | |
| ATGTTTCAGTGGAAAAGCAG+GGG | + | chr8.2:69058119-69058138 | None:intergenic | 40.0% | |
| ATTCAAGAAAGCCAGAAGCA+TGG | - | chr8.2:69058512-69058531 | MS.gene98170:CDS | 40.0% | |
| ATTGTAGTGTGATGAACTGG+TGG | - | chr8.2:69055144-69055163 | MS.gene98170:intron | 40.0% | |
| CTACAGGCAATCAAAGCAAA+AGG | - | chr8.2:69055944-69055963 | MS.gene98170:intron | 40.0% | |
| CTGAGGACAATGATAAAAGC+TGG | + | chr8.2:69057180-69057199 | None:intergenic | 40.0% | |
| CTGATTGTAGTGTGATGAAC+TGG | - | chr8.2:69055141-69055160 | MS.gene98170:intron | 40.0% | |
| CTGGAGATTATGTTTGGATG+AGG | - | chr8.2:69055595-69055614 | MS.gene98170:intron | 40.0% | |
| CTTCCAGCATTTGATGTACT+CGG | - | chr8.2:69057301-69057320 | MS.gene98170:intron | 40.0% | |
| CTTTCTTGAAGCTCCTGTTT+CGG | - | chr8.2:69055973-69055992 | MS.gene98170:intron | 40.0% | |
| GAAATCTTTCTTTCTGGGTG+AGG | - | chr8.2:69057327-69057346 | MS.gene98170:intron | 40.0% | |
| GACCTATTGCCAACCTATTA+CGG | + | chr8.2:69056969-69056988 | None:intergenic | 40.0% | |
| GAGCTTTCTGATAGCTAATC+TGG | + | chr8.2:69056380-69056399 | None:intergenic | 40.0% | |
| GATGTTTCAGTGGAAAAGCA+GGG | + | chr8.2:69058120-69058139 | None:intergenic | 40.0% | |
| GCGTAGAAGGTTAATTGACA+TGG | + | chr8.2:69054885-69054904 | None:intergenic | 40.0% | |
| GCTGGTAAGTTACTGTGATA+AGG | - | chr8.2:69057967-69057986 | MS.gene98170:intron | 40.0% | |
| GGTAAGTTACTGTGATAAGG+AGG | - | chr8.2:69057970-69057989 | MS.gene98170:intron | 40.0% | |
| GTTCCCAAAAGGAAATACAC+TGG | - | chr8.2:69056242-69056261 | MS.gene98170:intron | 40.0% | |
| TAGCTATCACGTAGAGCTTA+TGG | - | chr8.2:69057645-69057664 | MS.gene98170:intron | 40.0% | |
| TCAATTAACCTTCTACGCCA+TGG | - | chr8.2:69054887-69054906 | MS.gene98170:CDS | 40.0% | |
| TCAATTTCAACGGACAACTG+AGG | + | chr8.2:69057197-69057216 | None:intergenic | 40.0% | |
| TGAACATTGCCGTAATAGGT+TGG | - | chr8.2:69056957-69056976 | MS.gene98170:intron | 40.0% | |
| TGATGTTTCAGTGGAAAAGC+AGG | + | chr8.2:69058121-69058140 | None:intergenic | 40.0% | |
| TGCTGAGAAGTCTATAGTAC+TGG | - | chr8.2:69055576-69055595 | MS.gene98170:intron | 40.0% | |
| TTTCCGAGTACATCAAATGC+TGG | + | chr8.2:69057307-69057326 | None:intergenic | 40.0% | |
| TTTCTTGAAGCTCCTGTTTC+GGG | - | chr8.2:69055974-69055993 | MS.gene98170:intron | 40.0% | |
| ! | ACAGAAACAGAAAGTGCGTT+AGG | + | chr8.2:69054958-69054977 | None:intergenic | 40.0% |
| ! | CAACTAGTTATACTTGCTGC+CGG | - | chr8.2:69056022-69056041 | MS.gene98170:intron | 40.0% |
| ! | GAGATTGGATTTCTGGGTTT+GGG | - | chr8.2:69054845-69054864 | MS.gene98170:CDS | 40.0% |
| ! | GTACAGCATTTTCATCTCCA+AGG | + | chr8.2:69058171-69058190 | None:intergenic | 40.0% |
| ! | TTCAAGAAAGCCAGAAGCAT+GGG | - | chr8.2:69058513-69058532 | MS.gene98170:CDS | 40.0% |
| !! | AAACAGTGACTTTGAAGCCA+TGG | + | chr8.2:69054907-69054926 | None:intergenic | 40.0% |
| !! | GTGGTGGATTCGTTTGATAT+AGG | - | chr8.2:69057261-69057280 | MS.gene98170:intron | 40.0% |
| !! | TTGTCAACATGGTAATGGGA+AGG | - | chr8.2:69057377-69057396 | MS.gene98170:CDS | 40.0% |
| AGGTTGGCAATAGGTCCATT+GGG | - | chr8.2:69056973-69056992 | MS.gene98170:intron | 45.0% | |
| AGTAAGAAGCCTGCAGAAGA+TGG | - | chr8.2:69055998-69056017 | MS.gene98170:intron | 45.0% | |
| ATGTTGAAGAGGAGGAGTGA+GGG | - | chr8.2:69056502-69056521 | MS.gene98170:intron | 45.0% | |
| CAGGCAATCAAAGCAAAAGG+TGG | - | chr8.2:69055947-69055966 | MS.gene98170:intron | 45.0% | |
| CGGCAGCAAGTATAACTAGT+TGG | + | chr8.2:69056024-69056043 | None:intergenic | 45.0% | |
| CGTGCACAGCTGAAAAATCA+AGG | + | chr8.2:69058548-69058567 | None:intergenic | 45.0% | |
| GATCTTGGGGCCATAAGTAA+CGG | - | chr8.2:69058049-69058068 | MS.gene98170:CDS | 45.0% | |
| GGACAATGATAAAAGCTGGG+AGG | + | chr8.2:69057176-69057195 | None:intergenic | 45.0% | |
| TAGCACACTTCTTGATGTGC+TGG | - | chr8.2:69057949-69057968 | MS.gene98170:intron | 45.0% | |
| TCAAGGCTGTAAGCATAACC+TGG | - | chr8.2:69055830-69055849 | MS.gene98170:intron | 45.0% | |
| TCCACTGAAACATCAGCAGA+AGG | - | chr8.2:69058126-69058145 | MS.gene98170:intron | 45.0% | |
| TCCATTGGGATTGCACAGAT+GGG | - | chr8.2:69056987-69057006 | MS.gene98170:intron | 45.0% | |
| TCCTTCTGCTGATGTTTCAG+TGG | + | chr8.2:69058130-69058149 | None:intergenic | 45.0% | |
| TCTTTCTTTCTGGGTGAGGT+TGG | - | chr8.2:69057331-69057350 | MS.gene98170:intron | 45.0% | |
| TGTGATGAACTGGTGGAACA+TGG | - | chr8.2:69055151-69055170 | MS.gene98170:intron | 45.0% | |
| TTCAGTTGGAGAAACACCTG+CGG | - | chr8.2:69055177-69055196 | MS.gene98170:intron | 45.0% | |
| TTGGAACAGAACCCTCTCTA+AGG | - | chr8.2:69054925-69054944 | MS.gene98170:intron | 45.0% | |
| TTTCTGGGTGAGGTTGGAAA+TGG | - | chr8.2:69057337-69057356 | MS.gene98170:intron | 45.0% | |
| ! | AAAAGTGCAGCATAGCAGGA+TGG | + | chr8.2:69056103-69056122 | None:intergenic | 45.0% |
| ! | ACACTCGTTTGAAAGGCATG+AGG | + | chr8.2:69056183-69056202 | None:intergenic | 45.0% |
| ! | AGCACATCAAGAAGTGTGCT+AGG | + | chr8.2:69057950-69057969 | None:intergenic | 45.0% |
| ! | CTGACACTTGCTGAAAGAAG+TGG | - | chr8.2:69057917-69057936 | MS.gene98170:intron | 45.0% |
| ! | GCACATCAAGAAGTGTGCTA+GGG | + | chr8.2:69057949-69057968 | None:intergenic | 45.0% |
| ! | GGAGATTGGATTTCTGGGTT+TGG | - | chr8.2:69054844-69054863 | MS.gene98170:CDS | 45.0% |
| ! | TAGGTTGGCAATAGGTCCAT+TGG | - | chr8.2:69056972-69056991 | MS.gene98170:intron | 45.0% |
| ! | TCAAGAAAGCCAGAAGCATG+GGG | - | chr8.2:69058514-69058533 | MS.gene98170:CDS | 45.0% |
| ! | TGCCGTAATAGGTTGGCAAT+AGG | - | chr8.2:69056964-69056983 | MS.gene98170:intron | 45.0% |
| !! | AATCGGTGTCAGTCACATCA+AGG | + | chr8.2:69055286-69055305 | None:intergenic | 45.0% |
| ACTAGTTGGCCATCTTCTGC+AGG | + | chr8.2:69056010-69056029 | None:intergenic | 50.0% | |
| CATTGGGATTGCACAGATGG+GGG | - | chr8.2:69056989-69057008 | MS.gene98170:intron | 50.0% | |
| CCATTGGGATTGCACAGATG+GGG | - | chr8.2:69056988-69057007 | MS.gene98170:intron | 50.0% | |
| GATGTTGAAGAGGAGGAGTG+AGG | - | chr8.2:69056501-69056520 | MS.gene98170:intron | 50.0% | |
| GGCAAAGAAATGTGACTGCG+AGG | + | chr8.2:69058397-69058416 | None:intergenic | 50.0% | |
| GGCTTCTTACTACCCGAAAC+AGG | + | chr8.2:69055989-69056008 | None:intergenic | 50.0% | |
| GTCCATTGGGATTGCACAGA+TGG | - | chr8.2:69056986-69057005 | MS.gene98170:intron | 50.0% | |
| GTGGAACATGGTGCTTCAGT+TGG | - | chr8.2:69055163-69055182 | MS.gene98170:intron | 50.0% | |
| TCAGCAGAAGGACATGAGAC+TGG | - | chr8.2:69058138-69058157 | MS.gene98170:intron | 50.0% | |
| ! | AAAGCCAGAAGCATGGGGTT+GGG | - | chr8.2:69058519-69058538 | MS.gene98170:CDS | 50.0% |
| ! | GGCTAAAAGTGCAGCATAGC+AGG | + | chr8.2:69056107-69056126 | None:intergenic | 50.0% |
| ! | TATACTTGCTGCCGGAGACA+AGG | - | chr8.2:69056030-69056049 | MS.gene98170:CDS | 50.0% |
| !! | CTTTGAAGCCATGGCGTAGA+AGG | + | chr8.2:69054898-69054917 | None:intergenic | 50.0% |
| ATCCGATCCTGCAGCTGCTT+TGG | - | chr8.2:69055237-69055256 | MS.gene98170:CDS | 55.0% | |
| CACTTCTTGACAACAGCCGC+AGG | + | chr8.2:69055196-69055215 | None:intergenic | 55.0% | |
| CCCCATCTGTGCAATCCCAA+TGG | + | chr8.2:69056991-69057010 | None:intergenic | 55.0% | |
| GATGGGGGTTGCCTCTCATT+AGG | - | chr8.2:69057004-69057023 | MS.gene98170:intron | 55.0% | |
| TGTCGCAGCTGCAGCAAATG+AGG | - | chr8.2:69058198-69058217 | MS.gene98170:CDS | 55.0% | |
| ! | ATGAGACTGGCTCTTGCCCT+TGG | - | chr8.2:69058151-69058170 | MS.gene98170:intron | 55.0% |
| ! | GAAAGCCAGAAGCATGGGGT+TGG | - | chr8.2:69058518-69058537 | MS.gene98170:CDS | 55.0% |
| ! | TCATTTGCTGCAGCTGCGAC+AGG | + | chr8.2:69058199-69058218 | None:intergenic | 55.0% |
| CATGCGCTCTCACGCACACT+CGG | + | chr8.2:69058239-69058258 | None:intergenic | 60.0% | |
| CGCCAAAGCAGCTGCAGGAT+CGG | + | chr8.2:69055242-69055261 | None:intergenic | 60.0% | |
| GTCTCCCAACCCCATGCTTC+TGG | + | chr8.2:69058526-69058545 | None:intergenic | 60.0% | |
| ! | CGATCCTGCAGCTGCTTTGG+CGG | - | chr8.2:69055240-69055259 | MS.gene98170:CDS | 60.0% |
| CTGACCGCCAAAGCAGCTGC+AGG | + | chr8.2:69055247-69055266 | None:intergenic | 65.0% | |
| GCTGCAGCTGCGACAGGCAT+TGG | + | chr8.2:69058193-69058212 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 69054842 | 69058581 | 69054842 | ID=MS.gene98170 |
| chr8.2 | mRNA | 69054842 | 69058581 | 69054842 | ID=MS.gene98170.t1;Parent=MS.gene98170 |
| chr8.2 | exon | 69058477 | 69058581 | 69058477 | ID=MS.gene98170.t1.exon1;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69058477 | 69058581 | 69058477 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| chr8.2 | exon | 69058162 | 69058272 | 69058162 | ID=MS.gene98170.t1.exon2;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69058162 | 69058272 | 69058162 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| chr8.2 | exon | 69057976 | 69058074 | 69057976 | ID=MS.gene98170.t1.exon3;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69057976 | 69058074 | 69057976 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| chr8.2 | exon | 69057372 | 69057473 | 69057372 | ID=MS.gene98170.t1.exon4;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69057372 | 69057473 | 69057372 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| chr8.2 | exon | 69056025 | 69056140 | 69056025 | ID=MS.gene98170.t1.exon5;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69056025 | 69056140 | 69056025 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| chr8.2 | exon | 69055453 | 69055531 | 69055453 | ID=MS.gene98170.t1.exon6;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69055453 | 69055531 | 69055453 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| chr8.2 | exon | 69055204 | 69055374 | 69055204 | ID=MS.gene98170.t1.exon7;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69055204 | 69055374 | 69055204 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| chr8.2 | exon | 69054842 | 69054913 | 69054842 | ID=MS.gene98170.t1.exon8;Parent=MS.gene98170.t1 |
| chr8.2 | CDS | 69054842 | 69054913 | 69054842 | ID=cds.MS.gene98170.t1;Parent=MS.gene98170.t1 |
| Gene Sequence |
| Protein sequence |
