Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85223.t1 | XP_003597590.1 | 97.3 | 339 | 9 | 0 | 5 | 343 | 1 | 339 | 8.20E-184 | 652.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85223.t1 | F4I907 | 84.2 | 284 | 45 | 0 | 52 | 335 | 69 | 352 | 3.7e-132 | 472.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85223.t1 | G7IUG9 | 97.3 | 339 | 9 | 0 | 5 | 343 | 1 | 339 | 5.9e-184 | 652.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049171 | MS.gene85223 | 0.836394 | 9.60E-57 | -1.69E-46 |
| MS.gene049173 | MS.gene85223 | 0.855982 | 4.38E-62 | -1.69E-46 |
| MS.gene049217 | MS.gene85223 | 0.853864 | 1.80E-61 | -1.69E-46 |
| MS.gene049222 | MS.gene85223 | 0.835671 | 1.47E-56 | -1.69E-46 |
| MS.gene049285 | MS.gene85223 | 0.862646 | 4.37E-64 | -1.69E-46 |
| MS.gene049320 | MS.gene85223 | 0.820606 | 6.28E-53 | -1.69E-46 |
| MS.gene049427 | MS.gene85223 | 0.85316 | 2.87E-61 | -1.69E-46 |
| MS.gene049491 | MS.gene85223 | 0.80721 | 5.65E-50 | -1.69E-46 |
| MS.gene049614 | MS.gene85223 | 0.849259 | 3.63E-60 | -1.69E-46 |
| MS.gene049805 | MS.gene85223 | 0.827785 | 1.29E-54 | -1.69E-46 |
| MS.gene050076 | MS.gene85223 | 0.834915 | 2.27E-56 | -1.69E-46 |
| MS.gene050163 | MS.gene85223 | 0.868208 | 7.75E-66 | -1.69E-46 |
| MS.gene050165 | MS.gene85223 | 0.858593 | 7.41E-63 | -1.69E-46 |
| MS.gene050333 | MS.gene85223 | 0.87022 | 1.72E-66 | -1.69E-46 |
| MS.gene050353 | MS.gene85223 | -0.827182 | 1.80E-54 | -1.69E-46 |
| MS.gene050432 | MS.gene85223 | 0.818166 | 2.26E-52 | -1.69E-46 |
| MS.gene050444 | MS.gene85223 | 0.871375 | 7.17E-67 | -1.69E-46 |
| MS.gene050475 | MS.gene85223 | -0.833204 | 6.10E-56 | -1.69E-46 |
| MS.gene050504 | MS.gene85223 | 0.829208 | 5.85E-55 | -1.69E-46 |
| MS.gene050518 | MS.gene85223 | 0.806504 | 7.97E-50 | -1.69E-46 |
| MS.gene050541 | MS.gene85223 | -0.826214 | 3.07E-54 | -1.69E-46 |
| MS.gene050612 | MS.gene85223 | 0.822525 | 2.26E-53 | -1.69E-46 |
| MS.gene050675 | MS.gene85223 | 0.801493 | 8.78E-49 | -1.69E-46 |
| MS.gene050767 | MS.gene85223 | 0.871467 | 6.68E-67 | -1.69E-46 |
| MS.gene050770 | MS.gene85223 | 0.875405 | 3.16E-68 | -1.69E-46 |
| MS.gene050772 | MS.gene85223 | 0.82565 | 4.18E-54 | -1.69E-46 |
| MS.gene05079 | MS.gene85223 | -0.809569 | 1.77E-50 | -1.69E-46 |
| MS.gene05100 | MS.gene85223 | 0.832308 | 1.02E-55 | -1.69E-46 |
| MS.gene05101 | MS.gene85223 | 0.827593 | 1.44E-54 | -1.69E-46 |
| MS.gene051228 | MS.gene85223 | 0.901707 | 2.04E-78 | -1.69E-46 |
| MS.gene051434 | MS.gene85223 | 0.825803 | 3.84E-54 | -1.69E-46 |
| MS.gene051617 | MS.gene85223 | 0.813275 | 2.78E-51 | -1.69E-46 |
| MS.gene051666 | MS.gene85223 | 0.846133 | 2.63E-59 | -1.69E-46 |
| MS.gene051694 | MS.gene85223 | 0.816414 | 5.60E-52 | -1.69E-46 |
| MS.gene051810 | MS.gene85223 | 0.83857 | 2.66E-57 | -1.69E-46 |
| MS.gene051858 | MS.gene85223 | 0.820763 | 5.78E-53 | -1.69E-46 |
| MS.gene051949 | MS.gene85223 | 0.861011 | 1.38E-63 | -1.69E-46 |
| MS.gene052271 | MS.gene85223 | 0.849021 | 4.22E-60 | -1.69E-46 |
| MS.gene052290 | MS.gene85223 | 0.872338 | 3.43E-67 | -1.69E-46 |
| MS.gene052310 | MS.gene85223 | 0.816905 | 4.34E-52 | -1.69E-46 |
| MS.gene052326 | MS.gene85223 | 0.81193 | 5.47E-51 | -1.69E-46 |
| MS.gene052379 | MS.gene85223 | 0.90335 | 3.80E-79 | -1.69E-46 |
| MS.gene052484 | MS.gene85223 | 0.821099 | 4.83E-53 | -1.69E-46 |
| MS.gene052870 | MS.gene85223 | 0.864085 | 1.57E-64 | -1.69E-46 |
| MS.gene052872 | MS.gene85223 | 0.86188 | 7.52E-64 | -1.69E-46 |
| MS.gene053009 | MS.gene85223 | 0.844886 | 5.72E-59 | -1.69E-46 |
| MS.gene053103 | MS.gene85223 | 0.857771 | 1.30E-62 | -1.69E-46 |
| MS.gene053104 | MS.gene85223 | 0.869314 | 3.40E-66 | -1.69E-46 |
| MS.gene053107 | MS.gene85223 | 0.803519 | 3.35E-49 | -1.69E-46 |
| MS.gene053207 | MS.gene85223 | 0.83556 | 1.56E-56 | -1.69E-46 |
| MS.gene053213 | MS.gene85223 | 0.819048 | 1.43E-52 | -1.69E-46 |
| MS.gene053284 | MS.gene85223 | 0.821628 | 3.65E-53 | -1.69E-46 |
| MS.gene053285 | MS.gene85223 | 0.832694 | 8.17E-56 | -1.69E-46 |
| MS.gene053286 | MS.gene85223 | 0.817741 | 2.82E-52 | -1.69E-46 |
| MS.gene053322 | MS.gene85223 | 0.889292 | 2.76E-73 | -1.69E-46 |
| MS.gene053384 | MS.gene85223 | 0.845448 | 4.04E-59 | -1.69E-46 |
| MS.gene053632 | MS.gene85223 | 0.847157 | 1.38E-59 | -1.69E-46 |
| MS.gene053916 | MS.gene85223 | 0.812832 | 3.48E-51 | -1.69E-46 |
| MS.gene054376 | MS.gene85223 | 0.856719 | 2.66E-62 | -1.69E-46 |
| MS.gene054600 | MS.gene85223 | 0.844401 | 7.73E-59 | -1.69E-46 |
| MS.gene054642 | MS.gene85223 | 0.869197 | 3.71E-66 | -1.69E-46 |
| MS.gene054802 | MS.gene85223 | 0.833979 | 3.91E-56 | -1.69E-46 |
| MS.gene054803 | MS.gene85223 | 0.835149 | 1.98E-56 | -1.69E-46 |
| MS.gene054804 | MS.gene85223 | 0.837525 | 4.94E-57 | -1.69E-46 |
| MS.gene054954 | MS.gene85223 | 0.81957 | 1.08E-52 | -1.69E-46 |
| MS.gene055206 | MS.gene85223 | 0.841183 | 5.55E-58 | -1.69E-46 |
| MS.gene055212 | MS.gene85223 | 0.831143 | 1.97E-55 | -1.69E-46 |
| MS.gene055254 | MS.gene85223 | 0.857254 | 1.85E-62 | -1.69E-46 |
| MS.gene055362 | MS.gene85223 | 0.827862 | 1.24E-54 | -1.69E-46 |
| MS.gene055397 | MS.gene85223 | 0.861452 | 1.02E-63 | -1.69E-46 |
| MS.gene055412 | MS.gene85223 | 0.825192 | 5.36E-54 | -1.69E-46 |
| MS.gene055499 | MS.gene85223 | 0.850942 | 1.23E-60 | -1.69E-46 |
| MS.gene055502 | MS.gene85223 | 0.837028 | 6.62E-57 | -1.69E-46 |
| MS.gene055577 | MS.gene85223 | 0.826812 | 2.21E-54 | -1.69E-46 |
| MS.gene055636 | MS.gene85223 | 0.876006 | 1.97E-68 | -1.69E-46 |
| MS.gene055638 | MS.gene85223 | 0.851438 | 8.87E-61 | -1.69E-46 |
| MS.gene055647 | MS.gene85223 | 0.866679 | 2.39E-65 | -1.69E-46 |
| MS.gene055722 | MS.gene85223 | 0.842327 | 2.77E-58 | -1.69E-46 |
| MS.gene055748 | MS.gene85223 | 0.80363 | 3.18E-49 | -1.69E-46 |
| MS.gene05592 | MS.gene85223 | 0.847059 | 1.47E-59 | -1.69E-46 |
| MS.gene055941 | MS.gene85223 | 0.833635 | 4.76E-56 | -1.69E-46 |
| MS.gene055956 | MS.gene85223 | -0.835355 | 1.76E-56 | -1.69E-46 |
| MS.gene056083 | MS.gene85223 | 0.846297 | 2.37E-59 | -1.69E-46 |
| MS.gene056374 | MS.gene85223 | 0.852176 | 5.48E-61 | -1.69E-46 |
| MS.gene056410 | MS.gene85223 | 0.806943 | 6.43E-50 | -1.69E-46 |
| MS.gene056510 | MS.gene85223 | 0.81077 | 9.77E-51 | -1.69E-46 |
| MS.gene056549 | MS.gene85223 | 0.815285 | 1.00E-51 | -1.69E-46 |
| MS.gene056609 | MS.gene85223 | 0.842391 | 2.66E-58 | -1.69E-46 |
| MS.gene056657 | MS.gene85223 | 0.838481 | 2.80E-57 | -1.69E-46 |
| MS.gene056692 | MS.gene85223 | 0.801011 | 1.10E-48 | -1.69E-46 |
| MS.gene056796 | MS.gene85223 | 0.803969 | 2.70E-49 | -1.69E-46 |
| MS.gene056897 | MS.gene85223 | 0.847106 | 1.43E-59 | -1.69E-46 |
| MS.gene056898 | MS.gene85223 | 0.806968 | 6.36E-50 | -1.69E-46 |
| MS.gene056903 | MS.gene85223 | 0.817171 | 3.79E-52 | -1.69E-46 |
| MS.gene057011 | MS.gene85223 | 0.862505 | 4.83E-64 | -1.69E-46 |
| MS.gene057123 | MS.gene85223 | 0.801124 | 1.04E-48 | -1.69E-46 |
| MS.gene057129 | MS.gene85223 | 0.888039 | 8.41E-73 | -1.69E-46 |
| MS.gene057146 | MS.gene85223 | 0.810425 | 1.16E-50 | -1.69E-46 |
| MS.gene057246 | MS.gene85223 | 0.835867 | 1.31E-56 | -1.69E-46 |
| MS.gene057295 | MS.gene85223 | 0.842661 | 2.26E-58 | -1.69E-46 |
| MS.gene057331 | MS.gene85223 | 0.829082 | 6.28E-55 | -1.69E-46 |
| MS.gene057416 | MS.gene85223 | 0.852616 | 4.11E-61 | -1.69E-46 |
| MS.gene057658 | MS.gene85223 | 0.807145 | 5.83E-50 | -1.69E-46 |
| MS.gene057926 | MS.gene85223 | 0.830881 | 2.29E-55 | -1.69E-46 |
| MS.gene058019 | MS.gene85223 | 0.816889 | 4.38E-52 | -1.69E-46 |
| MS.gene058082 | MS.gene85223 | 0.812849 | 3.45E-51 | -1.69E-46 |
| MS.gene058293 | MS.gene85223 | 0.829253 | 5.71E-55 | -1.69E-46 |
| MS.gene058323 | MS.gene85223 | 0.823224 | 1.55E-53 | -1.69E-46 |
| MS.gene058419 | MS.gene85223 | 0.837058 | 6.50E-57 | -1.69E-46 |
| MS.gene058544 | MS.gene85223 | 0.815481 | 9.04E-52 | -1.69E-46 |
| MS.gene058660 | MS.gene85223 | 0.811171 | 8.00E-51 | -1.69E-46 |
| MS.gene058723 | MS.gene85223 | 0.820178 | 7.87E-53 | -1.69E-46 |
| MS.gene058773 | MS.gene85223 | 0.868273 | 7.38E-66 | -1.69E-46 |
| MS.gene058838 | MS.gene85223 | 0.804395 | 2.21E-49 | -1.69E-46 |
| MS.gene059022 | MS.gene85223 | 0.829162 | 6.01E-55 | -1.69E-46 |
| MS.gene059023 | MS.gene85223 | 0.81793 | 2.55E-52 | -1.69E-46 |
| MS.gene059029 | MS.gene85223 | 0.851073 | 1.13E-60 | -1.69E-46 |
| MS.gene05913 | MS.gene85223 | 0.804488 | 2.11E-49 | -1.69E-46 |
| MS.gene059326 | MS.gene85223 | 0.810366 | 1.19E-50 | -1.69E-46 |
| MS.gene05934 | MS.gene85223 | 0.825416 | 4.74E-54 | -1.69E-46 |
| MS.gene059536 | MS.gene85223 | 0.847053 | 1.47E-59 | -1.69E-46 |
| MS.gene05959 | MS.gene85223 | 0.81858 | 1.82E-52 | -1.69E-46 |
| MS.gene059676 | MS.gene85223 | 0.830697 | 2.54E-55 | -1.69E-46 |
| MS.gene059677 | MS.gene85223 | 0.845308 | 4.40E-59 | -1.69E-46 |
| MS.gene059718 | MS.gene85223 | 0.846428 | 2.19E-59 | -1.69E-46 |
| MS.gene059858 | MS.gene85223 | 0.839867 | 1.23E-57 | -1.69E-46 |
| MS.gene059902 | MS.gene85223 | 0.817899 | 2.60E-52 | -1.69E-46 |
| MS.gene059960 | MS.gene85223 | 0.890261 | 1.16E-73 | -1.69E-46 |
| MS.gene060193 | MS.gene85223 | 0.801779 | 7.67E-49 | -1.69E-46 |
| MS.gene060341 | MS.gene85223 | 0.815235 | 1.03E-51 | -1.69E-46 |
| MS.gene060727 | MS.gene85223 | 0.806048 | 9.94E-50 | -1.69E-46 |
| MS.gene060728 | MS.gene85223 | 0.803016 | 4.26E-49 | -1.69E-46 |
| MS.gene060762 | MS.gene85223 | 0.827968 | 1.17E-54 | -1.69E-46 |
| MS.gene060804 | MS.gene85223 | 0.850766 | 1.37E-60 | -1.69E-46 |
| MS.gene060818 | MS.gene85223 | 0.861376 | 1.07E-63 | -1.69E-46 |
| MS.gene06092 | MS.gene85223 | 0.828549 | 8.45E-55 | -1.69E-46 |
| MS.gene061041 | MS.gene85223 | 0.823626 | 1.25E-53 | -1.69E-46 |
| MS.gene061150 | MS.gene85223 | 0.877761 | 4.85E-69 | -1.69E-46 |
| MS.gene061200 | MS.gene85223 | 0.87828 | 3.19E-69 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene003315 | MS.gene85223 | PPI |
| MS.gene05985 | MS.gene85223 | PPI |
| MS.gene74531 | MS.gene85223 | PPI |
| MS.gene049066 | MS.gene85223 | PPI |
| MS.gene03058 | MS.gene85223 | PPI |
| MS.gene98170 | MS.gene85223 | PPI |
| MS.gene015821 | MS.gene85223 | PPI |
| MS.gene79722 | MS.gene85223 | PPI |
| MS.gene85223 | MS.gene59608 | PPI |
| MS.gene02110 | MS.gene85223 | PPI |
| MS.gene92143 | MS.gene85223 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85223.t1 | MTR_2g099910 | 97.345 | 339 | 9 | 0 | 5 | 343 | 1 | 339 | 0.0 | 683 |
| MS.gene85223.t1 | MTR_2g099910 | 96.414 | 251 | 9 | 0 | 5 | 255 | 1 | 251 | 0.0 | 503 |
| MS.gene85223.t1 | MTR_2g099910 | 93.191 | 235 | 13 | 1 | 5 | 239 | 1 | 232 | 3.11e-162 | 452 |
| MS.gene85223.t1 | MTR_8g028120 | 56.690 | 284 | 122 | 1 | 51 | 334 | 2 | 284 | 1.61e-105 | 311 |
| MS.gene85223.t1 | MTR_8g102470 | 29.841 | 315 | 213 | 3 | 21 | 334 | 13 | 320 | 1.51e-41 | 148 |
| MS.gene85223.t1 | MTR_8g102470 | 30.877 | 285 | 195 | 2 | 51 | 334 | 13 | 296 | 1.05e-39 | 142 |
| MS.gene85223.t1 | MTR_8g088900 | 32.932 | 249 | 164 | 2 | 51 | 297 | 15 | 262 | 2.30e-36 | 135 |
| MS.gene85223.t1 | MTR_2g030400 | 31.699 | 306 | 184 | 7 | 52 | 335 | 42 | 344 | 4.45e-32 | 123 |
| MS.gene85223.t1 | MTR_2g030400 | 32.155 | 283 | 167 | 7 | 52 | 312 | 42 | 321 | 7.61e-29 | 114 |
| MS.gene85223.t1 | MTR_2g030400 | 33.641 | 217 | 130 | 3 | 52 | 255 | 42 | 257 | 3.23e-27 | 108 |
| MS.gene85223.t1 | MTR_2g030400 | 33.641 | 217 | 130 | 3 | 52 | 255 | 42 | 257 | 8.44e-27 | 107 |
| MS.gene85223.t1 | MTR_6g069685 | 22.945 | 292 | 222 | 2 | 47 | 335 | 322 | 613 | 5.72e-20 | 91.7 |
| MS.gene85223.t1 | MTR_6g069685 | 21.379 | 290 | 223 | 4 | 52 | 337 | 7 | 295 | 3.94e-15 | 77.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85223.t1 | AT1G17650 | 84.155 | 284 | 45 | 0 | 52 | 335 | 10 | 293 | 9.82e-177 | 492 |
| MS.gene85223.t1 | AT1G17650 | 84.155 | 284 | 45 | 0 | 52 | 335 | 69 | 352 | 2.61e-175 | 491 |
| MS.gene85223.t1 | AT3G25530 | 58.451 | 284 | 118 | 0 | 51 | 334 | 2 | 285 | 1.56e-113 | 331 |
| MS.gene85223.t1 | AT3G25530 | 56.690 | 284 | 112 | 1 | 51 | 334 | 2 | 274 | 2.45e-109 | 320 |
| MS.gene85223.t1 | AT3G25530 | 57.282 | 206 | 88 | 0 | 51 | 256 | 2 | 207 | 2.25e-77 | 236 |
| MS.gene85223.t1 | AT4G29120 | 31.988 | 322 | 208 | 5 | 20 | 334 | 5 | 322 | 1.58e-40 | 145 |
| MS.gene85223.t1 | AT4G20930 | 32.588 | 313 | 179 | 8 | 52 | 342 | 40 | 342 | 1.21e-37 | 138 |
| MS.gene85223.t1 | AT4G20930 | 31.387 | 274 | 156 | 8 | 91 | 342 | 7 | 270 | 1.85e-28 | 112 |
| MS.gene85223.t1 | AT1G71170 | 27.338 | 278 | 197 | 2 | 57 | 334 | 21 | 293 | 6.98e-27 | 108 |
| MS.gene85223.t1 | AT1G71180 | 27.468 | 233 | 168 | 1 | 57 | 289 | 42 | 273 | 1.65e-22 | 96.7 |
| MS.gene85223.t1 | AT1G18270 | 26.298 | 289 | 208 | 3 | 51 | 335 | 323 | 610 | 1.66e-21 | 96.3 |
| MS.gene85223.t1 | AT1G18270 | 22.814 | 263 | 199 | 3 | 52 | 311 | 5 | 266 | 5.41e-14 | 73.6 |
| MS.gene85223.t1 | AT1G18270 | 26.298 | 289 | 208 | 3 | 51 | 335 | 324 | 611 | 1.66e-21 | 96.3 |
| MS.gene85223.t1 | AT1G18270 | 23.106 | 264 | 198 | 4 | 52 | 311 | 5 | 267 | 1.54e-12 | 69.3 |
| MS.gene85223.t1 | AT1G18270 | 25.694 | 288 | 211 | 2 | 51 | 335 | 323 | 610 | 1.71e-21 | 96.3 |
| MS.gene85223.t1 | AT1G18270 | 22.814 | 263 | 199 | 3 | 52 | 311 | 5 | 266 | 4.78e-14 | 73.9 |
| MS.gene85223.t1 | AT1G18270 | 25.694 | 288 | 211 | 2 | 51 | 335 | 323 | 610 | 1.83e-21 | 96.3 |
| MS.gene85223.t1 | AT1G18270 | 22.814 | 263 | 199 | 3 | 52 | 311 | 5 | 266 | 5.27e-14 | 73.9 |
Find 88 sgRNAs with CRISPR-Local
Find 202 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAACTACAGGCTCCAGTTTC+AGG | 0.167120 | 2.4:-4448788 | MS.gene85223:intron |
| GACACTTCTAAATTGATTAA+TGG | 0.238964 | 2.4:-4448988 | MS.gene85223:CDS |
| AATACCTCCACTAGTACTTT+TGG | 0.295746 | 2.4:+4448163 | None:intergenic |
| TGAAACGGTTGCTCCGTTCT+TGG | 0.330518 | 2.4:-4448524 | MS.gene85223:CDS |
| ACTAATAATACCTTGTCCTT+GGG | 0.344877 | 2.4:+4450499 | None:intergenic |
| ACCTTGTCCTTGGGGTTGTA+TGG | 0.349841 | 2.4:+4450508 | None:intergenic |
| TGCTCCGTTCTTGGACATCA+TGG | 0.351778 | 2.4:-4448515 | MS.gene85223:CDS |
| TACTTCTGAGTGAGAAAGTT+GGG | 0.371641 | 2.4:-4448192 | MS.gene85223:CDS |
| CGAGTACATTGGAGCACTAA+TGG | 0.376150 | 2.4:+4447986 | None:intergenic |
| TTGATCTCACTGTTTGGAAT+AGG | 0.380244 | 2.4:-4450058 | MS.gene85223:CDS |
| AACTAATAATACCTTGTCCT+TGG | 0.393043 | 2.4:+4450498 | None:intergenic |
| TCCATTGGTTTATAGTATGA+TGG | 0.398814 | 2.4:-4448233 | MS.gene85223:intron |
| CGCTGCAATCGGAATAGGTT+GGG | 0.407650 | 2.4:+4447777 | None:intergenic |
| TTGGCTCCCAAGCTGATTAG+AGG | 0.408502 | 2.4:+4450017 | None:intergenic |
| TACCTTGGTGATGTTGGAAA+TGG | 0.412205 | 2.4:-4448379 | MS.gene85223:CDS |
| TGATGAGATTTAGAGCCATT+GGG | 0.412792 | 2.4:+4450366 | None:intergenic |
| TTGATGAGATTTAGAGCCAT+TGG | 0.428876 | 2.4:+4450365 | None:intergenic |
| ATCAATTGTCCATCTTCTGC+TGG | 0.438341 | 2.4:+4448755 | None:intergenic |
| TCGTTAGCAGCCGCTGCAAT+CGG | 0.444539 | 2.4:+4447766 | None:intergenic |
| GCTCTAAATCTCATCAAAGC+TGG | 0.445265 | 2.4:-4450359 | MS.gene85223:CDS |
| GCAGCCGCTGCAATCGGAAT+AGG | 0.449872 | 2.4:+4447772 | None:intergenic |
| GCTCCGTTCTTGGACATCAT+GGG | 0.452907 | 2.4:-4448514 | MS.gene85223:CDS |
| CACAGGAAGGATGAATAGTA+TGG | 0.456314 | 2.4:-4450630 | None:intergenic |
| TAGAGGATCACATTTGCTCT+TGG | 0.467382 | 2.4:+4450034 | None:intergenic |
| AATATACACACCGCACTTTG+AGG | 0.467951 | 2.4:+4449806 | None:intergenic |
| GTTGAAGTGATGAAGGGAAA+AGG | 0.475851 | 2.4:+4450571 | None:intergenic |
| GGAAAGCATGGAGTTGCTAA+TGG | 0.475897 | 2.4:-4449702 | MS.gene85223:CDS |
| GTAGAGTTGATCTCACTGTT+TGG | 0.477694 | 2.4:-4450064 | MS.gene85223:intron |
| AATGGAATCGGTCCAGGAAA+AGG | 0.477706 | 2.4:-4449684 | MS.gene85223:CDS |
| CAAGATGCCGCTACTTCCTC+GGG | 0.490598 | 2.4:+4449857 | None:intergenic |
| CATGGAGTTGCTAATGGAAT+CGG | 0.492082 | 2.4:-4449696 | MS.gene85223:CDS |
| TGGATAATTTGACTGTATCA+TGG | 0.493372 | 2.4:+4447950 | None:intergenic |
| CAGAAGTAAACCTTCAGAAA+AGG | 0.493510 | 2.4:+4448207 | None:intergenic |
| ACAAGATGCCGCTACTTCCT+CGG | 0.493713 | 2.4:+4449856 | None:intergenic |
| CGACAGAAATCTTTATGAAA+CGG | 0.495971 | 2.4:-4448539 | MS.gene85223:CDS |
| GCGGAGAGTTGAAGTGATGA+AGG | 0.505923 | 2.4:+4450564 | None:intergenic |
| TGTGATCCTCTAATCAGCTT+GGG | 0.506829 | 2.4:-4450023 | MS.gene85223:CDS |
| ACAGGATCTAAGACTTGCCC+TGG | 0.506928 | 2.4:-4447818 | MS.gene85223:intron |
| GCCGCTACTTCCTCGGGAGA+AGG | 0.514121 | 2.4:+4449863 | None:intergenic |
| CAATTGATATTTCTTACAGC+AGG | 0.514852 | 2.4:-4448740 | MS.gene85223:intron |
| GTTGCTAATGGAATCGGTCC+AGG | 0.515390 | 2.4:-4449690 | MS.gene85223:CDS |
| CTCTAAATCTCATCAAAGCT+GGG | 0.519329 | 2.4:-4450358 | MS.gene85223:intron |
| GCTTGTTGTCAATATGATCA+TGG | 0.529260 | 2.4:-4448344 | MS.gene85223:CDS |
| TTACTTCTGAGTGAGAAAGT+TGG | 0.537292 | 2.4:-4448193 | MS.gene85223:CDS |
| AGGGATTGACACCCCTCCAC+GGG | 0.539501 | 2.4:-4450420 | MS.gene85223:CDS |
| CGGTATCATGGGCACCCCAA+TGG | 0.546961 | 2.4:-4450381 | MS.gene85223:CDS |
| CAGGGATTGACACCCCTCCA+CGG | 0.548362 | 2.4:-4450421 | MS.gene85223:CDS |
| ATGTGATCCTCTAATCAGCT+TGG | 0.553137 | 2.4:-4450024 | MS.gene85223:CDS |
| ATGGAATCGGTCCAGGAAAA+GGG | 0.557465 | 2.4:-4449683 | MS.gene85223:intron |
| TAATTTGACTGTATCATGGA+TGG | 0.558193 | 2.4:+4447954 | None:intergenic |
| CTCCGTTCTTGGACATCATG+GGG | 0.560146 | 2.4:-4448513 | MS.gene85223:CDS |
| GGGCCTTTCATCGAGTACAT+TGG | 0.561131 | 2.4:+4447975 | None:intergenic |
| CCGCTGCAATCGGAATAGGT+TGG | 0.566277 | 2.4:+4447776 | None:intergenic |
| CTAATAATACCTTGTCCTTG+GGG | 0.567748 | 2.4:+4450500 | None:intergenic |
| ACCTTCTCCCGAGGAAGTAG+CGG | 0.571231 | 2.4:-4449864 | MS.gene85223:CDS |
| CAGGATCTAAGACTTGCCCT+GGG | 0.573167 | 2.4:-4447817 | MS.gene85223:CDS |
| CTTGTTGTCAATATGATCAT+GGG | 0.573368 | 2.4:-4448343 | MS.gene85223:CDS |
| AAACAGACTCTGCTAACCCC+AGG | 0.575361 | 2.4:+4447800 | None:intergenic |
| GCTCCAATGTACTCGATGAA+AGG | 0.578127 | 2.4:-4447978 | MS.gene85223:CDS |
| TTGTCAATATGATCATGGGC+AGG | 0.583553 | 2.4:-4448339 | MS.gene85223:intron |
| AATGGACAGATAAAATCCAC+TGG | 0.583965 | 2.4:-4448970 | MS.gene85223:CDS |
| ATTGACACCCCTCCACGGGT+TGG | 0.588549 | 2.4:-4450416 | MS.gene85223:CDS |
| ACTTTGAGGATCAGCAAGCA+TGG | 0.590719 | 2.4:+4449820 | None:intergenic |
| TTGTATGGAAGCAGAGACAT+TGG | 0.592665 | 2.4:+4450523 | None:intergenic |
| AATTTGACTGTATCATGGAT+GGG | 0.592762 | 2.4:+4447955 | None:intergenic |
| GATGTTGCTTGTGGAAAGCA+TGG | 0.592782 | 2.4:-4449714 | MS.gene85223:CDS |
| GATGAGATTTAGAGCCATTG+GGG | 0.598554 | 2.4:+4450367 | None:intergenic |
| GCTAGATCCAAAAGTACTAG+TGG | 0.600091 | 2.4:-4448170 | MS.gene85223:CDS |
| TCCCCTAAAACATCAGCAGA+AGG | 0.603322 | 2.4:-4447919 | MS.gene85223:intron |
| TCCATACAACCCCAAGGACA+AGG | 0.611417 | 2.4:-4450509 | MS.gene85223:intron |
| GGATGTTTCAACTGTTGATG+TGG | 0.612786 | 2.4:-4449010 | MS.gene85223:CDS |
| CGGAGAGTTGAAGTGATGAA+GGG | 0.614817 | 2.4:+4450565 | None:intergenic |
| CCAACCTATTCCGATTGCAG+CGG | 0.624141 | 2.4:-4447776 | MS.gene85223:CDS |
| AAGCAGAGACATTGGAAATG+TGG | 0.625190 | 2.4:+4450531 | None:intergenic |
| TATCAGGTGGATGTTGCTTG+TGG | 0.626476 | 2.4:-4449723 | MS.gene85223:intron |
| TTCCCCATGATGTCCAAGAA+CGG | 0.640738 | 2.4:+4448511 | None:intergenic |
| AGATCCAAAAGTACTAGTGG+AGG | 0.648546 | 2.4:-4448167 | MS.gene85223:intron |
| CAGATATAAACCTTCTCCCG+AGG | 0.649506 | 2.4:-4449873 | MS.gene85223:CDS |
| AACAGACTCTGCTAACCCCA+GGG | 0.658481 | 2.4:+4447801 | None:intergenic |
| TTGGGGTGCCCATGATACCG+AGG | 0.671988 | 2.4:+4450384 | None:intergenic |
| ATCACACGGCTATAGTGATG+AGG | 0.672104 | 2.4:-4447725 | MS.gene85223:CDS |
| GCTTGCTGATCCTCAAAGTG+CGG | 0.674741 | 2.4:-4449816 | MS.gene85223:intron |
| TATAAAGTTGCAAAATCACA+CGG | 0.677424 | 2.4:-4447739 | MS.gene85223:CDS |
| TCTGCTTCCATACAACCCCA+AGG | 0.680591 | 2.4:-4450515 | MS.gene85223:CDS |
| CTCCATTTCCAACATCACCA+AGG | 0.698022 | 2.4:+4448377 | None:intergenic |
| AGGATCTAAGACTTGCCCTG+GGG | 0.728262 | 2.4:-4447816 | MS.gene85223:CDS |
| GAAATGTGGCGAGAGAAGCG+CGG | 0.740497 | 2.4:+4450545 | None:intergenic |
| CAGCACTCAGAAAACCAGTG+AGG | 0.776863 | 2.4:-4447664 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAAATATATATAGATATTA+AGG | + | chr2.4:4449248-4449267 | None:intergenic | 10.0% |
| !! | TACTAATAACTAATTAAATT+TGG | - | chr2.4:4449587-4449606 | MS.gene85223:intron | 10.0% |
| !! | AAATAACCATTCTAATATAT+GGG | - | chr2.4:4450235-4450254 | MS.gene85223:intron | 15.0% |
| !! | AATTTGAATTTGAATTTGAA+GGG | + | chr2.4:4447817-4447836 | None:intergenic | 15.0% |
| !!! | GATCATATATTCTTTTTTAA+TGG | + | chr2.4:4449820-4449839 | None:intergenic | 15.0% |
| !!! | TGTATAGTTTTTAAATCTTA+TGG | - | chr2.4:4448505-4448524 | MS.gene85223:intron | 15.0% |
| !! | AATAACCATTCTAATATATG+GGG | - | chr2.4:4450236-4450255 | MS.gene85223:intron | 20.0% |
| !! | ATAACTAATTAAATTTGGTC+TGG | - | chr2.4:4449592-4449611 | MS.gene85223:intron | 20.0% |
| !! | GAAACAATCAAATAGATATA+TGG | + | chr2.4:4448882-4448901 | None:intergenic | 20.0% |
| !! | GAAATAACCATTCTAATATA+TGG | - | chr2.4:4450234-4450253 | MS.gene85223:intron | 20.0% |
| !! | GAATTTGAATTTGAATTTGA+AGG | + | chr2.4:4447818-4447837 | None:intergenic | 20.0% |
| !! | TAACTAATTAAATTTGGTCT+GGG | - | chr2.4:4449593-4449612 | MS.gene85223:intron | 20.0% |
| !! | TATGAATTAATTGTTTGCTT+TGG | + | chr2.4:4449849-4449868 | None:intergenic | 20.0% |
| !! | TGGATAAACAACTTAATTAT+GGG | + | chr2.4:4449218-4449237 | None:intergenic | 20.0% |
| !! | TTGGATAAACAACTTAATTA+TGG | + | chr2.4:4449219-4449238 | None:intergenic | 20.0% |
| !!! | CATATATTCTTTTTTAATGG+AGG | + | chr2.4:4449817-4449836 | None:intergenic | 20.0% |
| !!! | GAAAATTTTGAGAATGAATT+AGG | + | chr2.4:4448197-4448216 | None:intergenic | 20.0% |
| !!! | TATATATATTTTCAGATACG+TGG | - | chr2.4:4449255-4449274 | MS.gene85223:intron | 20.0% |
| !!! | TATTTGTTTTATTCCATATC+AGG | - | chr2.4:4448547-4448566 | MS.gene85223:intron | 20.0% |
| !!! | TTTTCAATAGAAAGATGATA+AGG | + | chr2.4:4448766-4448785 | None:intergenic | 20.0% |
| !!! | TTTTTTTCAAGTGTAAGTAA+TGG | + | chr2.4:4448311-4448330 | None:intergenic | 20.0% |
| ! | AAAATAAAACCTATAGTGCA+TGG | - | chr2.4:4450165-4450184 | MS.gene85223:intron | 25.0% |
| ! | ATCTTAGTTTCTGTAACTAT+TGG | + | chr2.4:4449699-4449718 | None:intergenic | 25.0% |
| ! | ATGACCAAAACATACATATT+TGG | + | chr2.4:4448071-4448090 | None:intergenic | 25.0% |
| ! | ATGCAAGTTACTCTTTAATT+TGG | - | chr2.4:4449395-4449414 | MS.gene85223:intron | 25.0% |
| ! | GACACTTCTAAATTGATTAA+TGG | - | chr2.4:4449298-4449317 | MS.gene85223:intron | 25.0% |
| ! | TATAAAGTTGCAAAATCACA+CGG | - | chr2.4:4450547-4450566 | MS.gene85223:CDS | 25.0% |
| ! | TATTTCTTGCATGATTTAGT+TGG | - | chr2.4:4449426-4449445 | MS.gene85223:intron | 25.0% |
| !! | AAACAGGAGACAAATTTTAA+AGG | + | chr2.4:4449974-4449993 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr2.4:4449221-4449240 | MS.gene85223:intron | 25.0% |
| !! | ATTCAATGATTTCTGTTTTC+AGG | - | chr2.4:4447846-4447865 | MS.gene85223:intron | 25.0% |
| !! | GTTACCAAATATGTATGTTT+TGG | - | chr2.4:4448064-4448083 | MS.gene85223:intron | 25.0% |
| !! | TTAAGTTGTTTATCCAAACA+GGG | - | chr2.4:4449222-4449241 | MS.gene85223:intron | 25.0% |
| !! | TTCAATGATTTCTGTTTTCA+GGG | - | chr2.4:4447847-4447866 | MS.gene85223:intron | 25.0% |
| !! | TTTTAACGTAATGACATGAT+AGG | - | chr2.4:4448904-4448923 | MS.gene85223:intron | 25.0% |
| !!! | AGTTTTTTCATAAGCTATTC+TGG | + | chr2.4:4449099-4449118 | None:intergenic | 25.0% |
| !!! | TGATCATTTGTTGTAGAAAT+AGG | - | chr2.4:4449151-4449170 | MS.gene85223:intron | 25.0% |
| AACTAATAATACCTTGTCCT+TGG | + | chr2.4:4447791-4447810 | None:intergenic | 30.0% | |
| AATTAAATTTGGTCTGGGAA+AGG | - | chr2.4:4449598-4449617 | MS.gene85223:intron | 30.0% | |
| AATTTGACTGTATCATGGAT+GGG | + | chr2.4:4450334-4450353 | None:intergenic | 30.0% | |
| ACTAATAATACCTTGTCCTT+GGG | + | chr2.4:4447790-4447809 | None:intergenic | 30.0% | |
| AGATGGAAGAATTGTTGTAT+TGG | + | chr2.4:4448726-4448745 | None:intergenic | 30.0% | |
| ATGTTCATGGAGAATAGATA+GGG | + | chr2.4:4449377-4449396 | None:intergenic | 30.0% | |
| CAATTGATATTTCTTACAGC+AGG | - | chr2.4:4449546-4449565 | MS.gene85223:intron | 30.0% | |
| CCTAATGTCTATCAAATTGT+AGG | + | chr2.4:4448672-4448691 | None:intergenic | 30.0% | |
| CCTACAATTTGATAGACATT+AGG | - | chr2.4:4448669-4448688 | MS.gene85223:intron | 30.0% | |
| CGACAGAAATCTTTATGAAA+CGG | - | chr2.4:4449747-4449766 | MS.gene85223:intron | 30.0% | |
| GCAAAATTTCCATTTCGTAA+GGG | + | chr2.4:4450262-4450281 | None:intergenic | 30.0% | |
| GGAACATATTGAAGATACTT+TGG | + | chr2.4:4448651-4448670 | None:intergenic | 30.0% | |
| TAATTTGACTGTATCATGGA+TGG | + | chr2.4:4450335-4450354 | None:intergenic | 30.0% | |
| TCAAATAGAAGCAAAGAAAC+AGG | + | chr2.4:4449990-4450009 | None:intergenic | 30.0% | |
| TCAACATAATCATCAACACA+AGG | + | chr2.4:4450013-4450032 | None:intergenic | 30.0% | |
| TGCAAAATTTCCATTTCGTA+AGG | + | chr2.4:4450263-4450282 | None:intergenic | 30.0% | |
| TGGAAAGATGAATTCATACT+TGG | + | chr2.4:4448291-4448310 | None:intergenic | 30.0% | |
| TGGATAATTTGACTGTATCA+TGG | + | chr2.4:4450339-4450358 | None:intergenic | 30.0% | |
| ! | ATGCAGTCTAAATTTTACCT+TGG | - | chr2.4:4449892-4449911 | MS.gene85223:intron | 30.0% |
| ! | ATTTTGCAGGTAATTTCACA+AGG | - | chr2.4:4450275-4450294 | MS.gene85223:intron | 30.0% |
| ! | CTTGTTGTCAATATGATCAT+GGG | - | chr2.4:4449943-4449962 | MS.gene85223:intron | 30.0% |
| ! | GATATAGTCTTTGTTTGTCA+AGG | + | chr2.4:4448126-4448145 | None:intergenic | 30.0% |
| ! | TTACGAAATGGAAATTTTGC+AGG | - | chr2.4:4450262-4450281 | MS.gene85223:intron | 30.0% |
| ! | TTTCTTTCTCTCTTTTCCAT+TGG | - | chr2.4:4450038-4450057 | MS.gene85223:CDS | 30.0% |
| !! | GTGTTTGGTATATGTTTTGA+TGG | - | chr2.4:4448943-4448962 | MS.gene85223:intron | 30.0% |
| !! | TAATTGTTTGCTTTGGAAGA+AGG | + | chr2.4:4449842-4449861 | None:intergenic | 30.0% |
| !! | TCCATTGGTTTATAGTATGA+TGG | - | chr2.4:4450053-4450072 | MS.gene85223:CDS | 30.0% |
| !! | TTGTTTTATTCCATATCAGG+TGG | - | chr2.4:4448550-4448569 | MS.gene85223:intron | 30.0% |
| !!! | AAATTTTACCTTGGTGATGT+TGG | - | chr2.4:4449901-4449920 | MS.gene85223:intron | 30.0% |
| !!! | ATTCTTTTTTAATGGAGGAC+AGG | + | chr2.4:4449812-4449831 | None:intergenic | 30.0% |
| !!! | CACAATTTATTTTAGCTCAC+AGG | - | chr2.4:4449069-4449088 | MS.gene85223:intron | 30.0% |
| AAGCAAATCCAAATAAACCC+AGG | + | chr2.4:4448970-4448989 | None:intergenic | 35.0% | |
| AATGGACAGATAAAATCCAC+TGG | - | chr2.4:4449316-4449335 | MS.gene85223:intron | 35.0% | |
| AGATACTGTGTTCAAGTGTT+TGG | - | chr2.4:4448928-4448947 | MS.gene85223:intron | 35.0% | |
| ATAAACACACCATGCACTAT+AGG | + | chr2.4:4450177-4450196 | None:intergenic | 35.0% | |
| ATAGATATTAAGGCCCTGTT+TGG | + | chr2.4:4449238-4449257 | None:intergenic | 35.0% | |
| CAGAAGTAAACCTTCAGAAA+AGG | + | chr2.4:4450082-4450101 | None:intergenic | 35.0% | |
| CATATTGAGAGAGCTAAAGA+TGG | + | chr2.4:4448743-4448762 | None:intergenic | 35.0% | |
| CATGTTCATGGAGAATAGAT+AGG | + | chr2.4:4449378-4449397 | None:intergenic | 35.0% | |
| CTAATAATACCTTGTCCTTG+GGG | + | chr2.4:4447789-4447808 | None:intergenic | 35.0% | |
| CTCTAAATCTCATCAAAGCT+GGG | - | chr2.4:4447928-4447947 | MS.gene85223:CDS | 35.0% | |
| GCCATCATACTATAAACCAA+TGG | + | chr2.4:4450057-4450076 | None:intergenic | 35.0% | |
| GCTTATTTGAACTTATCTGC+TGG | - | chr2.4:4448986-4449005 | MS.gene85223:CDS | 35.0% | |
| GTCATTACTCTTGACAACTA+TGG | + | chr2.4:4448823-4448842 | None:intergenic | 35.0% | |
| TACAAGCAGAGAATTCAACT+AGG | - | chr2.4:4449642-4449661 | MS.gene85223:intron | 35.0% | |
| TACTTCTGAGTGAGAAAGTT+GGG | - | chr2.4:4450094-4450113 | MS.gene85223:intron | 35.0% | |
| TCTTGCATGATTTAGTTGGA+TGG | - | chr2.4:4449430-4449449 | MS.gene85223:intron | 35.0% | |
| TGTGAGAGCAAAACTAATAC+TGG | + | chr2.4:4450434-4450453 | None:intergenic | 35.0% | |
| TTACTTCTGAGTGAGAAAGT+TGG | - | chr2.4:4450093-4450112 | MS.gene85223:intron | 35.0% | |
| ! | AAGAGTAACTTGCATGTTCA+TGG | + | chr2.4:4449390-4449409 | None:intergenic | 35.0% |
| ! | AATACCTCCACTAGTACTTT+TGG | + | chr2.4:4450126-4450145 | None:intergenic | 35.0% |
| ! | CTATGAAAACAGCTAGCTTA+TGG | - | chr2.4:4449040-4449059 | MS.gene85223:intron | 35.0% |
| ! | TAAATATAGCACCCTTTTCC+TGG | + | chr2.4:4448617-4448636 | None:intergenic | 35.0% |
| ! | TGATGAGATTTAGAGCCATT+GGG | + | chr2.4:4447923-4447942 | None:intergenic | 35.0% |
| ! | TTGATCTCACTGTTTGGAAT+AGG | - | chr2.4:4448228-4448247 | MS.gene85223:intron | 35.0% |
| ! | TTGATGAGATTTAGAGCCAT+TGG | + | chr2.4:4447924-4447943 | None:intergenic | 35.0% |
| !! | ATCCACTGGAGCATTATTTT+TGG | - | chr2.4:4449330-4449349 | MS.gene85223:intron | 35.0% |
| !! | CATAAGCTAGCTGTTTTCAT+AGG | + | chr2.4:4449042-4449061 | None:intergenic | 35.0% |
| !! | GCTTGTTGTCAATATGATCA+TGG | - | chr2.4:4449942-4449961 | MS.gene85223:intron | 35.0% |
| !!! | GTATATGTTTTGATGGTCCT+GGG | - | chr2.4:4448950-4448969 | MS.gene85223:intron | 35.0% |
| !!! | GTTTTCTGAGTGCTGAAATT+TGG | + | chr2.4:4450617-4450636 | None:intergenic | 35.0% |
| !!! | TATTAGTTTTGCTCTCACAC+AGG | - | chr2.4:4450435-4450454 | MS.gene85223:intron | 35.0% |
| AAGCAGAGACATTGGAAATG+TGG | + | chr2.4:4447758-4447777 | None:intergenic | 40.0% | |
| AAGGGCCCCATATATTAGAA+TGG | + | chr2.4:4450244-4450263 | None:intergenic | 40.0% | |
| AATATACACACCGCACTTTG+AGG | + | chr2.4:4448483-4448502 | None:intergenic | 40.0% | |
| AGCCATTTCTGTGTAACTAC+AGG | - | chr2.4:4449485-4449504 | MS.gene85223:intron | 40.0% | |
| AGCCTGTAGTTACACAGAAA+TGG | + | chr2.4:4449490-4449509 | None:intergenic | 40.0% | |
| AGTGAGATCAACTCTACAAC+AGG | + | chr2.4:4448219-4448238 | None:intergenic | 40.0% | |
| AGTGCATGGTGTGTTTATGT+CGG | - | chr2.4:4450179-4450198 | MS.gene85223:intron | 40.0% | |
| ATCAATTGTCCATCTTCTGC+TGG | + | chr2.4:4449534-4449553 | None:intergenic | 40.0% | |
| ATGTGATCCTCTAATCAGCT+TGG | - | chr2.4:4448262-4448281 | MS.gene85223:intron | 40.0% | |
| CATGGAGTTGCTAATGGAAT+CGG | - | chr2.4:4448590-4448609 | MS.gene85223:intron | 40.0% | |
| CTCCAAAAATAATGCTCCAG+TGG | + | chr2.4:4449335-4449354 | None:intergenic | 40.0% | |
| GGATGTTTCAACTGTTGATG+TGG | - | chr2.4:4449276-4449295 | MS.gene85223:intron | 40.0% | |
| GTCTTCTATCTAGTGACATG+TGG | - | chr2.4:4448162-4448181 | MS.gene85223:intron | 40.0% | |
| GTTGAAGTGATGAAGGGAAA+AGG | + | chr2.4:4447718-4447737 | None:intergenic | 40.0% | |
| TAAGCACTTGTGAGACTGTT+TGG | - | chr2.4:4449011-4449030 | MS.gene85223:CDS | 40.0% | |
| TAGAGGATCACATTTGCTCT+TGG | + | chr2.4:4448255-4448274 | None:intergenic | 40.0% | |
| TGTGATCCTCTAATCAGCTT+GGG | - | chr2.4:4448263-4448282 | MS.gene85223:intron | 40.0% | |
| TTACACAGAAATGGCTTCAC+AGG | + | chr2.4:4449481-4449500 | None:intergenic | 40.0% | |
| TTGCTCTCACACAGGATTAA+TGG | - | chr2.4:4450443-4450462 | MS.gene85223:intron | 40.0% | |
| TTGTATGGAAGCAGAGACAT+TGG | + | chr2.4:4447766-4447785 | None:intergenic | 40.0% | |
| TTGTCAATATGATCATGGGC+AGG | - | chr2.4:4449947-4449966 | MS.gene85223:intron | 40.0% | |
| ! | ATGATGGCATCCTTTTCTGA+AGG | - | chr2.4:4450069-4450088 | MS.gene85223:intron | 40.0% |
| ! | GATGAGATTTAGAGCCATTG+GGG | + | chr2.4:4447922-4447941 | None:intergenic | 40.0% |
| ! | GCTCTAAATCTCATCAAAGC+TGG | - | chr2.4:4447927-4447946 | MS.gene85223:CDS | 40.0% |
| ! | GTAGAGTTGATCTCACTGTT+TGG | - | chr2.4:4448222-4448241 | MS.gene85223:intron | 40.0% |
| ! | TGCCTTCTGCTGATGTTTTA+GGG | + | chr2.4:4450372-4450391 | None:intergenic | 40.0% |
| ! | TTGATGGTCCTGGGTTTATT+TGG | - | chr2.4:4448959-4448978 | MS.gene85223:CDS | 40.0% |
| ! | TTGCCTTCTGCTGATGTTTT+AGG | + | chr2.4:4450373-4450392 | None:intergenic | 40.0% |
| !! | AGATCCAAAAGTACTAGTGG+AGG | - | chr2.4:4450119-4450138 | MS.gene85223:intron | 40.0% |
| !! | GCTAGATCCAAAAGTACTAG+TGG | - | chr2.4:4450116-4450135 | MS.gene85223:intron | 40.0% |
| !! | TACCTTGGTGATGTTGGAAA+TGG | - | chr2.4:4449907-4449926 | MS.gene85223:intron | 40.0% |
| !!! | CACTGGAGCATTATTTTTGG+AGG | - | chr2.4:4449333-4449352 | MS.gene85223:intron | 40.0% |
| !!! | GGTATATGTTTTGATGGTCC+TGG | - | chr2.4:4448949-4448968 | MS.gene85223:intron | 40.0% |
| !!! | TGTTTTAGGGGAAATGCAGT+TGG | + | chr2.4:4450359-4450378 | None:intergenic | 40.0% |
| AATGGAATCGGTCCAGGAAA+AGG | - | chr2.4:4448602-4448621 | MS.gene85223:intron | 45.0% | |
| ATCACACGGCTATAGTGATG+AGG | - | chr2.4:4450561-4450580 | MS.gene85223:CDS | 45.0% | |
| ATGGAATCGGTCCAGGAAAA+GGG | - | chr2.4:4448603-4448622 | MS.gene85223:intron | 45.0% | |
| ATTTGGTCTGGGAAAGGAGT+TGG | - | chr2.4:4449604-4449623 | MS.gene85223:intron | 45.0% | |
| CAAGCAACATCCACCTGATA+TGG | + | chr2.4:4448563-4448582 | None:intergenic | 45.0% | |
| CACACAGGATTAATGGTGAC+AGG | - | chr2.4:4450450-4450469 | MS.gene85223:intron | 45.0% | |
| CAGATATAAACCTTCTCCCG+AGG | - | chr2.4:4448413-4448432 | MS.gene85223:intron | 45.0% | |
| CGGAGAGTTGAAGTGATGAA+GGG | + | chr2.4:4447724-4447743 | None:intergenic | 45.0% | |
| CTCCATTTCCAACATCACCA+AGG | + | chr2.4:4449912-4449931 | None:intergenic | 45.0% | |
| GCTCCAATGTACTCGATGAA+AGG | - | chr2.4:4450308-4450327 | MS.gene85223:intron | 45.0% | |
| TAACTACAGGCTCCAGTTTC+AGG | - | chr2.4:4449498-4449517 | MS.gene85223:intron | 45.0% | |
| TATATGGGGCCCTTACGAAA+TGG | - | chr2.4:4450250-4450269 | MS.gene85223:intron | 45.0% | |
| TCCAAAAAGCCAGCAGAAGA+TGG | - | chr2.4:4449522-4449541 | MS.gene85223:intron | 45.0% | |
| TCCCCTAAAACATCAGCAGA+AGG | - | chr2.4:4450367-4450386 | MS.gene85223:CDS | 45.0% | |
| TGGTGTGTTTATGTCGGAGT+CGG | - | chr2.4:4450185-4450204 | MS.gene85223:intron | 45.0% | |
| TTCCCCATGATGTCCAAGAA+CGG | + | chr2.4:4449778-4449797 | None:intergenic | 45.0% | |
| ! | ACTTTGAGGATCAGCAAGCA+TGG | + | chr2.4:4448469-4448488 | None:intergenic | 45.0% |
| ! | CGAGTACATTGGAGCACTAA+TGG | + | chr2.4:4450303-4450322 | None:intergenic | 45.0% |
| ! | GATGTTGCTTGTGGAAAGCA+TGG | - | chr2.4:4448572-4448591 | MS.gene85223:intron | 45.0% |
| ! | GGAAAGCATGGAGTTGCTAA+TGG | - | chr2.4:4448584-4448603 | MS.gene85223:intron | 45.0% |
| ! | TATCAGGTGGATGTTGCTTG+TGG | - | chr2.4:4448563-4448582 | MS.gene85223:intron | 45.0% |
| !! | GCCTTCTGCTGATGTTTTAG+GGG | + | chr2.4:4450371-4450390 | None:intergenic | 45.0% |
| !! | TTTTTGGGCCTCGGTATCAT+GGG | - | chr2.4:4447894-4447913 | MS.gene85223:intron | 45.0% |
| !!! | GGCTTTTTGGAACCTGAAAC+TGG | + | chr2.4:4449513-4449532 | None:intergenic | 45.0% |
| !!! | TCCATCTTCTGCTGGCTTTT+TGG | + | chr2.4:4449526-4449545 | None:intergenic | 45.0% |
| !!! | ATTTTATTATATAATATTTC+AGG | - | chr2.4:4449724-4449743 | MS.gene85223:intron | 5.0% |
| AAACAGACTCTGCTAACCCC+AGG | + | chr2.4:4450489-4450508 | None:intergenic | 50.0% | |
| AACAGACTCTGCTAACCCCA+GGG | + | chr2.4:4450488-4450507 | None:intergenic | 50.0% | |
| ACAAGATGCCGCTACTTCCT+CGG | + | chr2.4:4448433-4448452 | None:intergenic | 50.0% | |
| ACCTTGTCCTTGGGGTTGTA+TGG | + | chr2.4:4447781-4447800 | None:intergenic | 50.0% | |
| CCAACCTATTCCGATTGCAG+CGG | - | chr2.4:4450510-4450529 | MS.gene85223:CDS | 50.0% | |
| CGCTGCAATCGGAATAGGTT+GGG | + | chr2.4:4450512-4450531 | None:intergenic | 50.0% | |
| CTCCGTTCTTGGACATCATG+GGG | - | chr2.4:4449773-4449792 | MS.gene85223:intron | 50.0% | |
| GCGGAGAGTTGAAGTGATGA+AGG | + | chr2.4:4447725-4447744 | None:intergenic | 50.0% | |
| GCTCCGTTCTTGGACATCAT+GGG | - | chr2.4:4449772-4449791 | MS.gene85223:intron | 50.0% | |
| GGGCCTTTCATCGAGTACAT+TGG | + | chr2.4:4450314-4450333 | None:intergenic | 50.0% | |
| GTGTTTATGTCGGAGTCGGT+TGG | - | chr2.4:4450189-4450208 | MS.gene85223:intron | 50.0% | |
| GTTGCTAATGGAATCGGTCC+AGG | - | chr2.4:4448596-4448615 | MS.gene85223:intron | 50.0% | |
| TCCATACAACCCCAAGGACA+AGG | - | chr2.4:4447777-4447796 | MS.gene85223:CDS | 50.0% | |
| TCTGCTTCCATACAACCCCA+AGG | - | chr2.4:4447771-4447790 | MS.gene85223:CDS | 50.0% | |
| TGAAACGGTTGCTCCGTTCT+TGG | - | chr2.4:4449762-4449781 | MS.gene85223:intron | 50.0% | |
| TGCTCCGTTCTTGGACATCA+TGG | - | chr2.4:4449771-4449790 | MS.gene85223:intron | 50.0% | |
| TTGGCTCCCAAGCTGATTAG+AGG | + | chr2.4:4448272-4448291 | None:intergenic | 50.0% | |
| ! | ACAGGATCTAAGACTTGCCC+TGG | - | chr2.4:4450468-4450487 | MS.gene85223:intron | 50.0% |
| ! | AGGATCTAAGACTTGCCCTG+GGG | - | chr2.4:4450470-4450489 | MS.gene85223:intron | 50.0% |
| ! | CAGGATCTAAGACTTGCCCT+GGG | - | chr2.4:4450469-4450488 | MS.gene85223:intron | 50.0% |
| ! | GCTTGCTGATCCTCAAAGTG+CGG | - | chr2.4:4448470-4448489 | MS.gene85223:intron | 50.0% |
| !! | CTTTTTGGGCCTCGGTATCA+TGG | - | chr2.4:4447893-4447912 | MS.gene85223:intron | 50.0% |
| !! | TCTGGGAAAGGAGTTGGTGA+AGG | - | chr2.4:4449610-4449629 | MS.gene85223:intron | 50.0% |
| ACCTTCTCCCGAGGAAGTAG+CGG | - | chr2.4:4448422-4448441 | MS.gene85223:intron | 55.0% | |
| CAAAAAGCCAACCCGTGGAG+GGG | + | chr2.4:4447880-4447899 | None:intergenic | 55.0% | |
| CAAGATGCCGCTACTTCCTC+GGG | + | chr2.4:4448432-4448451 | None:intergenic | 55.0% | |
| CCAAAAAGCCAACCCGTGGA+GGG | + | chr2.4:4447881-4447900 | None:intergenic | 55.0% | |
| CCGCTGCAATCGGAATAGGT+TGG | + | chr2.4:4450513-4450532 | None:intergenic | 55.0% | |
| GAAATGTGGCGAGAGAAGCG+CGG | + | chr2.4:4447744-4447763 | None:intergenic | 55.0% | |
| TCGTTAGCAGCCGCTGCAAT+CGG | + | chr2.4:4450523-4450542 | None:intergenic | 55.0% | |
| ! | GGAGTCGGTTGGTGCTTAGT+AGG | - | chr2.4:4450200-4450219 | MS.gene85223:intron | 55.0% |
| !!! | CCTCCACGGGTTGGCTTTTT+GGG | - | chr2.4:4447879-4447898 | MS.gene85223:intron | 55.0% |
| AGGCCCAAAAAGCCAACCCG+TGG | + | chr2.4:4447885-4447904 | None:intergenic | 60.0% | |
| AGGGATTGACACCCCTCCAC+GGG | - | chr2.4:4447866-4447885 | MS.gene85223:intron | 60.0% | |
| ATTGACACCCCTCCACGGGT+TGG | - | chr2.4:4447870-4447889 | MS.gene85223:intron | 60.0% | |
| CAGGGATTGACACCCCTCCA+CGG | - | chr2.4:4447865-4447884 | MS.gene85223:intron | 60.0% | |
| CCCAAAAAGCCAACCCGTGG+AGG | + | chr2.4:4447882-4447901 | None:intergenic | 60.0% | |
| CGGTATCATGGGCACCCCAA+TGG | - | chr2.4:4447905-4447924 | MS.gene85223:intron | 60.0% | |
| GCAGCCGCTGCAATCGGAAT+AGG | + | chr2.4:4450517-4450536 | None:intergenic | 60.0% | |
| ! | TTGGGGTGCCCATGATACCG+AGG | + | chr2.4:4447905-4447924 | None:intergenic | 60.0% |
| !!! | CCCTCCACGGGTTGGCTTTT+TGG | - | chr2.4:4447878-4447897 | MS.gene85223:intron | 60.0% |
| !!! | CGGGTTGGCTTTTTGGGCCT+CGG | - | chr2.4:4447885-4447904 | MS.gene85223:intron | 60.0% |
| GCCGCTACTTCCTCGGGAGA+AGG | + | chr2.4:4448426-4448445 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 4447666 | 4450642 | 4447666 | ID=MS.gene85223 |
| chr2.4 | mRNA | 4447666 | 4450642 | 4447666 | ID=MS.gene85223.t1;Parent=MS.gene85223 |
| chr2.4 | exon | 4450510 | 4450642 | 4450510 | ID=MS.gene85223.t1.exon1;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4450510 | 4450642 | 4450510 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4450359 | 4450440 | 4450359 | ID=MS.gene85223.t1.exon2;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4450359 | 4450440 | 4450359 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4450017 | 4450082 | 4450017 | ID=MS.gene85223.t1.exon3;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4450017 | 4450082 | 4450017 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4449817 | 4449892 | 4449817 | ID=MS.gene85223.t1.exon4;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4449817 | 4449892 | 4449817 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4449684 | 4449739 | 4449684 | ID=MS.gene85223.t1.exon5;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4449684 | 4449739 | 4449684 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4448954 | 4449038 | 4448954 | ID=MS.gene85223.t1.exon6;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4448954 | 4449038 | 4448954 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4448741 | 4448801 | 4448741 | ID=MS.gene85223.t1.exon7;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4448741 | 4448801 | 4448741 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4448510 | 4448562 | 4448510 | ID=MS.gene85223.t1.exon8;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4448510 | 4448562 | 4448510 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4448340 | 4448410 | 4448340 | ID=MS.gene85223.t1.exon9;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4448340 | 4448410 | 4448340 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4448168 | 4448240 | 4448168 | ID=MS.gene85223.t1.exon10;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4448168 | 4448240 | 4448168 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4447920 | 4448024 | 4447920 | ID=MS.gene85223.t1.exon11;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4447920 | 4448024 | 4447920 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| chr2.4 | exon | 4447666 | 4447836 | 4447666 | ID=MS.gene85223.t1.exon12;Parent=MS.gene85223.t1 |
| chr2.4 | CDS | 4447666 | 4447836 | 4447666 | ID=cds.MS.gene85223.t1;Parent=MS.gene85223.t1 |
| Gene Sequence |
| Protein sequence |
