Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011304.01.T01 | XP_003597748.1 | 100 | 46 | 0 | 0 | 21 | 66 | 1 | 46 | 1.24E-23 | 96.3 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011304.01.T01 | G7II18 | 100.000 | 46 | 0 | 0 | 21 | 66 | 1 | 46 | 5.91e-24 | 96.3 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MsG0080048152.01 | MsG0280011304.01 | 0.816126 | 6.494169e-52 | 4.562555e-49 |
MsG0080048761.01 | MsG0280011304.01 | -0.809470 | 1.862221e-50 | 1.094292e-47 |
MsG0080048849.01 | MsG0280011304.01 | 0.804068 | 2.578879e-49 | 1.317181e-46 |
MsG0080048865.01 | MsG0280011304.01 | 0.822663 | 2.099834e-53 | 1.768895e-50 |
MsG0080048878.01 | MsG0280011304.01 | 0.811544 | 6.638852e-51 | 4.121095e-48 |
MsG0080049069.01 | MsG0280011304.01 | 0.805275 | 1.444165e-49 | 7.608189e-47 |
MsG0080049147.01 | MsG0280011304.01 | 0.821872 | 3.204294e-53 | 2.639095e-50 |
MsG0180000038.01 | MsG0280011304.01 | 0.835967 | 1.232982e-56 | 1.531826e-53 |
MsG0180000152.01 | MsG0280011304.01 | 0.820790 | 5.694778e-53 | 4.550160e-50 |
MsG0180000355.01 | MsG0280011304.01 | 0.845648 | 3.561378e-59 | 5.975853e-56 |
MsG0180000444.01 | MsG0280011304.01 | 0.802215 | 6.234488e-49 | 3.036647e-46 |
MsG0180001118.01 | MsG0280011304.01 | 0.814063 | 1.864107e-51 | 1.238172e-48 |
MsG0180001131.01 | MsG0280011304.01 | 0.818470 | 1.928070e-52 | 1.444598e-49 |
MsG0180001167.01 | MsG0280011304.01 | 0.829114 | 6.170086e-55 | 6.254997e-52 |
MsG0180001356.01 | MsG0280011304.01 | 0.815312 | 9.860957e-52 | 6.775043e-49 |
MsG0180003651.01 | MsG0280011304.01 | 0.848972 | 4.358236e-60 | 8.138287e-57 |
MsG0180003697.01 | MsG0280011304.01 | 0.837310 | 5.605401e-57 | 7.252479e-54 |
MsG0180004149.01 | MsG0280011304.01 | 0.802526 | 5.380706e-49 | 2.641553e-46 |
MsG0180004398.01 | MsG0280011304.01 | 0.821096 | 4.840758e-53 | 3.901181e-50 |
MsG0180004493.01 | MsG0280011304.01 | 0.823159 | 1.609350e-53 | 1.374835e-50 |
MsG0180004605.01 | MsG0280011304.01 | -0.845502 | 3.901581e-59 | 6.515213e-56 |
MsG0180004743.01 | MsG0280011304.01 | 0.817332 | 3.483935e-52 | 2.529784e-49 |
MsG0180004750.01 | MsG0280011304.01 | 0.830333 | 3.116155e-55 | 3.273215e-52 |
MsG0180004765.01 | MsG0280011304.01 | 0.812465 | 4.181506e-51 | 2.660792e-48 |
MsG0180004854.01 | MsG0280011304.01 | 0.809452 | 1.878701e-50 | 1.103438e-47 |
MsG0180005153.01 | MsG0280011304.01 | 0.815715 | 8.021318e-52 | 5.572669e-49 |
MsG0180005169.01 | MsG0280011304.01 | 0.804375 | 2.226755e-49 | 1.146269e-46 |
MsG0180005193.01 | MsG0280011304.01 | 0.800298 | 1.539145e-48 | 7.141443e-46 |
MsG0180005303.01 | MsG0280011304.01 | -0.842363 | 2.706257e-58 | 4.093976e-55 |
MsG0180005334.01 | MsG0280011304.01 | 0.818179 | 2.243161e-52 | 1.667154e-49 |
MsG0180005424.01 | MsG0280011304.01 | 0.827177 | 1.806279e-54 | 1.730627e-51 |
MsG0180005763.01 | MsG0280011304.01 | 0.804727 | 1.879792e-49 | 9.765561e-47 |
MsG0180005927.01 | MsG0280011304.01 | 0.811913 | 5.518061e-51 | 3.458792e-48 |
MsG0180005964.01 | MsG0280011304.01 | 0.802821 | 4.676339e-49 | 2.313334e-46 |
MsG0180006096.01 | MsG0280011304.01 | 0.839281 | 1.740538e-57 | 2.392016e-54 |
MsG0180006144.01 | MsG0280011304.01 | 0.864779 | 9.511033e-65 | 3.022674e-61 |
MsG0180006220.01 | MsG0280011304.01 | 0.802826 | 4.664860e-49 | 2.308008e-46 |
MsG0280006376.01 | MsG0280011304.01 | 0.818784 | 1.635965e-52 | 1.236331e-49 |
MsG0280010595.01 | MsG0280011304.01 | 0.825276 | 5.118938e-54 | 4.644514e-51 |
MsG0280010776.01 | MsG0280011304.01 | 0.826200 | 3.090276e-54 | 2.878679e-51 |
MsG0280011059.01 | MsG0280011304.01 | -0.818768 | 1.650185e-52 | 1.246529e-49 |
MsG0280011304.01 | MsG0380011516.01 | 0.801380 | 9.253482e-49 | 4.412688e-46 |
MsG0280011304.01 | MsG0380011581.01 | 0.808188 | 3.501291e-50 | 1.988921e-47 |
MsG0280011304.01 | MsG0380011747.01 | 0.800571 | 1.353872e-48 | 6.325281e-46 |
MsG0280011304.01 | MsG0380011844.01 | 0.834785 | 2.451397e-56 | 2.939159e-53 |
MsG0280011304.01 | MsG0380012012.01 | 0.830317 | 3.142992e-55 | 3.299743e-52 |
MsG0280011304.01 | MsG0380012122.01 | 0.854309 | 1.341586e-61 | 2.983447e-58 |
MsG0280011304.01 | MsG0380012374.01 | 0.803170 | 3.961038e-49 | 1.976891e-46 |
MsG0280011304.01 | MsG0380013085.01 | 0.812403 | 4.315745e-51 | 2.741593e-48 |
MsG0280011304.01 | MsG0380013853.01 | 0.819582 | 1.076994e-52 | 8.321306e-50 |
MsG0280011304.01 | MsG0380015066.01 | -0.840484 | 8.457044e-58 | 1.206347e-54 |
MsG0280011304.01 | MsG0380015216.01 | 0.804072 | 2.574568e-49 | 1.315082e-46 |
MsG0280011304.01 | MsG0380015435.01 | 0.803816 | 2.910386e-49 | 1.476842e-46 |
MsG0280011304.01 | MsG0380015466.01 | 0.854100 | 1.540857e-61 | 3.403769e-58 |
MsG0280011304.01 | MsG0380015533.01 | 0.848223 | 7.028509e-60 | 1.280792e-56 |
MsG0280011304.01 | MsG0380015703.01 | 0.830054 | 3.645302e-55 | 3.798018e-52 |
MsG0280011304.01 | MsG0380015930.01 | 0.801060 | 1.075720e-48 | 5.088846e-46 |
MsG0280011304.01 | MsG0380016004.01 | 0.813512 | 2.465672e-51 | 1.613452e-48 |
MsG0280011304.01 | MsG0380016126.01 | 0.808531 | 2.958000e-50 | 1.695448e-47 |
MsG0280011304.01 | MsG0380016191.01 | -0.832204 | 1.080087e-55 | 1.198846e-52 |
MsG0280011304.01 | MsG0380016347.01 | -0.804009 | 2.652972e-49 | 1.352926e-46 |
MsG0280011304.01 | MsG0380016505.01 | 0.810109 | 1.356949e-50 | 8.109655e-48 |
MsG0280011304.01 | MsG0380016671.01 | 0.845413 | 4.125290e-59 | 6.869227e-56 |
MsG0280011304.01 | MsG0380016820.01 | 0.842654 | 2.266474e-58 | 3.459403e-55 |
MsG0280011304.01 | MsG0380017085.01 | 0.858637 | 7.186346e-63 | 1.846279e-59 |
MsG0280011304.01 | MsG0380017178.01 | -0.805098 | 1.572776e-49 | 8.248410e-47 |
MsG0280011304.01 | MsG0380017198.01 | 0.801199 | 1.007664e-48 | 4.783352e-46 |
MsG0280011304.01 | MsG0380017258.01 | 0.802010 | 6.872946e-49 | 3.330096e-46 |
MsG0280011304.01 | MsG0380017461.01 | 0.811058 | 8.462621e-51 | 5.186372e-48 |
MsG0280011304.01 | MsG0380017746.01 | 0.826758 | 2.274968e-54 | 2.153032e-51 |
MsG0280011304.01 | MsG0480018124.01 | 0.801101 | 1.055240e-48 | 4.997155e-46 |
MsG0280011304.01 | MsG0480018278.01 | 0.819056 | 1.419087e-52 | 1.080542e-49 |
MsG0280011304.01 | MsG0480018402.01 | 0.815949 | 7.114017e-52 | 4.973754e-49 |
MsG0280011304.01 | MsG0480018603.01 | 0.802341 | 5.873326e-49 | 2.870061e-46 |
MsG0280011304.01 | MsG0480018911.01 | 0.852687 | 3.919450e-61 | 8.256154e-58 |
MsG0280011304.01 | MsG0480020024.01 | 0.818437 | 1.961604e-52 | 1.468424e-49 |
MsG0280011304.01 | MsG0480020025.01 | 0.801021 | 1.095953e-48 | 5.179439e-46 |
MsG0280011304.01 | MsG0480020136.01 | 0.823723 | 1.187917e-53 | 1.031268e-50 |
MsG0280011304.01 | MsG0480020788.01 | 0.811829 | 5.755528e-51 | 3.599664e-48 |
MsG0280011304.01 | MsG0480020887.01 | 0.809823 | 1.564018e-50 | 9.277103e-48 |
MsG0280011304.01 | MsG0480021037.01 | 0.837896 | 3.966454e-57 | 5.225267e-54 |
MsG0280011304.01 | MsG0480021280.01 | 0.838126 | 3.460151e-57 | 4.590214e-54 |
MsG0280011304.01 | MsG0480021768.01 | 0.877244 | 7.341464e-69 | 3.665812e-65 |
MsG0280011304.01 | MsG0480021776.01 | -0.838407 | 2.928366e-57 | 3.918557e-54 |
MsG0280011304.01 | MsG0480021869.01 | 0.802998 | 4.298570e-49 | 2.135823e-46 |
MsG0280011304.01 | MsG0480022780.01 | 0.827878 | 1.226791e-54 | 1.199609e-51 |
MsG0280011304.01 | MsG0480022877.01 | 0.819982 | 8.723303e-53 | 6.815975e-50 |
MsG0280011304.01 | MsG0480023073.01 | 0.819504 | 1.121695e-52 | 8.647926e-50 |
MsG0280011304.01 | MsG0480023162.01 | 0.837286 | 5.684720e-57 | 7.349495e-54 |
MsG0280011304.01 | MsG0480023221.01 | 0.803892 | 2.805614e-49 | 1.426534e-46 |
MsG0280011304.01 | MsG0480023448.01 | 0.854311 | 1.339343e-61 | 2.978657e-58 |
MsG0280011304.01 | MsG0480023652.01 | 0.831747 | 1.400664e-55 | 1.534155e-52 |
MsG0280011304.01 | MsG0480023660.01 | 0.805929 | 1.052638e-49 | 5.639895e-47 |
MsG0280011304.01 | MsG0480023814.01 | 0.828549 | 8.451645e-55 | 8.427936e-52 |
MsG0280011304.01 | MsG0480024030.01 | 0.813621 | 2.332497e-51 | 1.530837e-48 |
MsG0280011304.01 | MsG0580024161.01 | 0.833878 | 4.140408e-56 | 4.831896e-53 |
MsG0280011304.01 | MsG0580024495.01 | 0.807461 | 4.997924e-50 | 2.785496e-47 |
MsG0280011304.01 | MsG0580025363.01 | -0.801947 | 7.080654e-49 | 3.425237e-46 |
MsG0280011304.01 | MsG0580025467.01 | 0.805293 | 1.431696e-49 | 7.546172e-47 |
MsG0280011304.01 | MsG0580025627.01 | 0.815701 | 8.079226e-52 | 5.610572e-49 |
MsG0280011304.01 | MsG0580026175.01 | 0.801688 | 8.003264e-49 | 3.846119e-46 |
MsG0280011304.01 | MsG0580026511.01 | 0.804159 | 2.469913e-49 | 1.264400e-46 |
MsG0280011304.01 | MsG0580027103.01 | 0.832346 | 9.959919e-56 | 1.110139e-52 |
MsG0280011304.01 | MsG0580028044.01 | 0.833017 | 6.788670e-56 | 7.720556e-53 |
MsG0280011304.01 | MsG0580028418.01 | 0.812017 | 5.239132e-51 | 3.293323e-48 |
MsG0280011304.01 | MsG0580028630.01 | 0.862082 | 6.515998e-64 | 1.884441e-60 |
MsG0280011304.01 | MsG0580029279.01 | -0.806786 | 6.944879e-50 | 3.803219e-47 |
MsG0280011304.01 | MsG0580029717.01 | 0.817052 | 4.026653e-52 | 2.901688e-49 |
MsG0280011304.01 | MsG0580029879.01 | 0.821942 | 3.087681e-53 | 2.548004e-50 |
MsG0280011304.01 | MsG0580029925.01 | 0.832696 | 8.155915e-56 | 9.186687e-53 |
MsG0280011304.01 | MsG0680030350.01 | 0.821607 | 3.690657e-53 | 3.016693e-50 |
MsG0280011304.01 | MsG0680030356.01 | -0.843415 | 1.421028e-58 | 2.221901e-55 |
MsG0280011304.01 | MsG0680030555.01 | 0.834765 | 2.480509e-56 | 2.972292e-53 |
MsG0280011304.01 | MsG0680030636.01 | 0.803953 | 2.725080e-49 | 1.387745e-46 |
MsG0280011304.01 | MsG0680030764.01 | 0.818197 | 2.222966e-52 | 1.652911e-49 |
MsG0280011304.01 | MsG0680030992.01 | 0.820676 | 6.047411e-53 | 4.816393e-50 |
MsG0280011304.01 | MsG0680031628.01 | 0.815121 | 1.087358e-51 | 7.431599e-49 |
MsG0280011304.01 | MsG0680031939.01 | 0.831781 | 1.374219e-55 | 1.506765e-52 |
MsG0280011304.01 | MsG0680032203.01 | 0.803286 | 3.748509e-49 | 1.876305e-46 |
MsG0280011304.01 | MsG0680032204.01 | 0.819720 | 1.001556e-52 | 7.768275e-50 |
MsG0280011304.01 | MsG0680033868.01 | 0.800494 | 1.403812e-48 | 6.545831e-46 |
MsG0280011304.01 | MsG0680035498.01 | 0.830958 | 2.190471e-55 | 2.343372e-52 |
MsG0280011304.01 | MsG0680035765.01 | 0.826441 | 2.708014e-54 | 2.539924e-51 |
MsG0280011304.01 | MsG0780035957.01 | 0.811173 | 7.993715e-51 | 4.913572e-48 |
MsG0280011304.01 | MsG0780035960.01 | 0.834079 | 3.686869e-56 | 4.328283e-53 |
MsG0280011304.01 | MsG0780036186.01 | 0.821860 | 3.224785e-53 | 2.655164e-50 |
MsG0280011304.01 | MsG0780036190.01 | 0.808692 | 2.733841e-50 | 1.573475e-47 |
MsG0280011304.01 | MsG0780036486.01 | 0.863072 | 3.230126e-64 | 9.669050e-61 |
MsG0280011304.01 | MsG0780036544.01 | -0.811732 | 6.044204e-51 | 3.770580e-48 |
MsG0280011304.01 | MsG0780036659.01 | 0.801145 | 1.033508e-48 | 4.899504e-46 |
MsG0280011304.01 | MsG0780036964.01 | 0.802660 | 5.048531e-49 | 2.486975e-46 |
MsG0280011304.01 | MsG0780037082.01 | 0.801011 | 1.101295e-48 | 5.203320e-46 |
MsG0280011304.01 | MsG0780037093.01 | 0.873405 | 1.508138e-67 | 6.538069e-64 |
MsG0280011304.01 | MsG0780038309.01 | -0.817594 | 3.041812e-52 | 2.224621e-49 |
MsG0280011304.01 | MsG0780038907.01 | 0.816378 | 5.702972e-52 | 4.034462e-49 |
MsG0280011304.01 | MsG0780039438.01 | 0.822894 | 1.854974e-53 | 1.572882e-50 |
MsG0280011304.01 | MsG0780040566.01 | -0.812401 | 4.318509e-51 | 2.743259e-48 |
MsG0280011304.01 | MsG0780040596.01 | 0.833889 | 4.114264e-56 | 4.803043e-53 |
MsG0280011304.01 | MsG0780040858.01 | 0.821623 | 3.658290e-53 | 2.991650e-50 |
MsG0280011304.01 | MsG0780041016.01 | 0.825837 | 3.770421e-54 | 3.476045e-51 |
MsG0280011304.01 | MsG0780041137.01 | 0.843498 | 1.350515e-58 | 2.116946e-55 |
MsG0280011304.01 | MsG0780041223.01 | 0.802616 | 5.154634e-49 | 2.536510e-46 |
MsG0280011304.01 | MsG0780041692.01 | 0.816487 | 5.392291e-52 | 3.825808e-49 |
MsG0280011304.01 | MsG0780041747.01 | 0.802863 | 4.583576e-49 | 2.269751e-46 |
MsG0280011304.01 | MsG0880042062.01 | 0.845100 | 5.013549e-59 | 8.264867e-56 |
MsG0280011304.01 | MsG0880042129.01 | 0.819418 | 1.173384e-52 | 9.024658e-50 |
MsG0280011304.01 | MsG0880042700.01 | 0.804178 | 2.446538e-49 | 1.253049e-46 |
MsG0280011304.01 | MsG0880042795.01 | 0.816799 | 4.590388e-52 | 3.284846e-49 |
MsG0280011304.01 | MsG0880042857.01 | 0.803570 | 3.273045e-49 | 1.650481e-46 |
MsG0280011304.01 | MsG0880043749.01 | 0.808485 | 3.026694e-50 | 1.732741e-47 |
MsG0280011304.01 | MsG0880044005.01 | 0.805602 | 1.233240e-49 | 6.551902e-47 |
MsG0280011304.01 | MsG0880044142.01 | 0.824413 | 8.179798e-54 | 7.239656e-51 |
MsG0280011304.01 | MsG0880044728.01 | 0.804438 | 2.159758e-49 | 1.113559e-46 |
MsG0280011304.01 | MsG0880045362.01 | 0.807120 | 5.903509e-50 | 3.260947e-47 |
MsG0280011304.01 | MsG0880045765.01 | 0.826676 | 2.381067e-54 | 2.248162e-51 |
MsG0280011304.01 | MsG0880046333.01 | -0.802150 | 6.429690e-49 | 3.126577e-46 |
MsG0280011304.01 | MsG0880046457.01 | 0.806537 | 7.839137e-50 | 4.265671e-47 |
MsG0280011304.01 | MsG0880047481.01 | -0.804629 | 1.970487e-49 | 1.020984e-46 |
MsG0280011304.01 | MsG0880047703.01 | 0.824198 | 9.190662e-54 | 8.085033e-51 |
MsG0280006993.01 | MsG0280011304.01 | 0.824250 | 8.936499e-54 | 7.872672e-51 |
MsG0280007193.01 | MsG0280011304.01 | -0.839294 | 1.727359e-57 | 2.374773e-54 |
MsG0280007224.01 | MsG0280011304.01 | -0.805446 | 1.330035e-49 | 7.037934e-47 |
MsG0280007501.01 | MsG0280011304.01 | 0.812168 | 4.855368e-51 | 3.064748e-48 |
MsG0280007547.01 | MsG0280011304.01 | 0.808625 | 2.825071e-50 | 1.623122e-47 |
MsG0280007763.01 | MsG0280011304.01 | 0.834101 | 3.640897e-56 | 4.277260e-53 |
MsG0280007903.01 | MsG0280011304.01 | 0.858973 | 5.701984e-63 | 1.482006e-59 |
MsG0280008429.01 | MsG0280011304.01 | 0.808739 | 2.670424e-50 | 1.538861e-47 |
MsG0280008929.01 | MsG0280011304.01 | 0.805577 | 1.248408e-49 | 6.628256e-47 |
MsG0280009256.01 | MsG0280011304.01 | 0.803020 | 4.254635e-49 | 2.115132e-46 |
MsG0280010082.01 | MsG0280011304.01 | 0.809161 | 2.169641e-50 | 1.264511e-47 |
MsG0280010349.01 | MsG0280011304.01 | 0.813516 | 2.460347e-51 | 1.610157e-48 |
MsG0280010532.01 | MsG0280011304.01 | -0.824824 | 6.545403e-54 | 5.862843e-51 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011304.01.T01 | MTR_2g101850 | 100.000 | 46 | 0 | 0 | 21 | 66 | 1 | 46 | 1.50e-27 | 96.3 |
MsG0280011304.01.T01 | MTR_6g087770 | 76.087 | 46 | 11 | 0 | 21 | 66 | 1 | 46 | 1.99e-21 | 80.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MsG0280011304.01.T01 | AT1G52245 | 80.435 | 46 | 9 | 0 | 21 | 66 | 1 | 46 | 4.94e-23 | 85.1 |
MsG0280011304.01.T01 | AT3G16120 | 71.739 | 46 | 13 | 0 | 21 | 66 | 1 | 46 | 1.82e-17 | 70.9 |
MsG0280011304.01.T01 | AT3G16120 | 71.739 | 46 | 13 | 0 | 21 | 66 | 1 | 46 | 1.82e-17 | 70.9 |
Find 5 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GCTTGAATCTGCATCTTAGT+TGG | 0.432610 | 2:+82172065 | None:intergenic |
AACAGTAACTTCAAAGATGT+TGG | 0.466683 | 2:-82172120 | MsG0280011304.01.T01:CDS |
TAAGATGCAGATTCAAGCCA+TGG | 0.595332 | 2:-82172060 | MsG0280011304.01.T01:CDS |
GTAACTTCAAAGATGTTGGA+AGG | 0.606545 | 2:-82172116 | MsG0280011304.01.T01:CDS |
AGCTTCAGAAGCATAAGCCA+TGG | 0.620640 | 2:+82172043 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTGTTTAATAATGAT+CGG | - | Chr2:82172447-82172466 | MsG0280011304.01.T01:intron | 10.0% |
!!! | GAAAATTATTTCCTTTATTT+TGG | - | Chr2:82172525-82172544 | MsG0280011304.01.T01:intron | 15.0% |
!!! | GATAAGAATATATATAGTTT+TGG | - | Chr2:82172041-82172060 | MsG0280011304.01.T01:CDS | 15.0% |
!!! | TACTATTTTTATTTTTCCTT+TGG | + | Chr2:82172702-82172721 | None:intergenic | 15.0% |
!! | AATAGTAAAATATGCCATAT+AGG | - | Chr2:82172715-82172734 | MsG0280011304.01.T01:intron | 20.0% |
!! | ACATAGAAATATAAAAGAAG+AGG | - | Chr2:82172477-82172496 | MsG0280011304.01.T01:intron | 20.0% |
!! | AGTGATTATTGAAATTTGAA+TGG | + | Chr2:82172268-82172287 | None:intergenic | 20.0% |
!! | ATAGAAATATAAAAGAAGAG+GGG | - | Chr2:82172479-82172498 | MsG0280011304.01.T01:intron | 20.0% |
!! | CATAGAAATATAAAAGAAGA+GGG | - | Chr2:82172478-82172497 | MsG0280011304.01.T01:intron | 20.0% |
!!! | AAAATGTAACCTTTTTTATG+TGG | + | Chr2:82173073-82173092 | None:intergenic | 20.0% |
!!! | AAATGTAACCTTTTTTATGT+GGG | + | Chr2:82173072-82173091 | None:intergenic | 20.0% |
!!! | TTTTGAGCATTTTCTATTAA+TGG | + | Chr2:82172670-82172689 | None:intergenic | 20.0% |
! | AAATATACAGTTACTCAGTT+AGG | - | Chr2:82172157-82172176 | MsG0280011304.01.T01:intron | 25.0% |
! | AAGAACAAACAACTAAACAT+TGG | - | Chr2:82172198-82172217 | MsG0280011304.01.T01:intron | 25.0% |
! | ATGTTTATATCATAACTCGA+TGG | + | Chr2:82172336-82172355 | None:intergenic | 25.0% |
! | TAGAAATATAAAAGAAGAGG+GGG | - | Chr2:82172480-82172499 | MsG0280011304.01.T01:intron | 25.0% |
!!! | AGATAGACTTTAAAATGACA+CGG | + | Chr2:82172821-82172840 | None:intergenic | 25.0% |
!!! | CTATTTTGAAGACTAAAGAA+AGG | + | Chr2:82172849-82172868 | None:intergenic | 25.0% |
AAAATGACACGGAAAAAACA+TGG | + | Chr2:82172810-82172829 | None:intergenic | 30.0% | |
AACAGTAACTTCAAAGATGT+TGG | - | Chr2:82172929-82172948 | MsG0280011304.01.T01:intron | 30.0% | |
ACTGATACTATATGCCTATA+TGG | + | Chr2:82172732-82172751 | None:intergenic | 30.0% | |
!!! | TTTTTGGGACAACAAAGATA+TGG | - | Chr2:82171922-82171941 | MsG0280011304.01.T01:CDS | 30.0% |
AATCAGCTTGAAGTGAAATG+TGG | - | Chr2:82171959-82171978 | MsG0280011304.01.T01:CDS | 35.0% | |
CTCAAAATCTCTGTAACCAA+AGG | - | Chr2:82172683-82172702 | MsG0280011304.01.T01:intron | 35.0% | |
GGTTGCATTCCTTATGTTAA+GGG | + | Chr2:82172789-82172808 | None:intergenic | 35.0% | |
GTAACTTCAAAGATGTTGGA+AGG | - | Chr2:82172933-82172952 | MsG0280011304.01.T01:intron | 35.0% | |
TCACTCATGTTGTCTTTACT+AGG | + | Chr2:82172591-82172610 | None:intergenic | 35.0% | |
TCGATGGTATATGTGTATGT+TGG | + | Chr2:82172320-82172339 | None:intergenic | 35.0% | |
TGAGTCATTCCCTTAACATA+AGG | - | Chr2:82172777-82172796 | MsG0280011304.01.T01:intron | 35.0% | |
TGGTTGCATTCCTTATGTTA+AGG | + | Chr2:82172790-82172809 | None:intergenic | 35.0% | |
TTAGATCTCCTTTCAGTTCT+TGG | - | Chr2:82172895-82172914 | MsG0280011304.01.T01:intron | 35.0% | |
! | CATGATGAAAAGTATGAGTG+AGG | - | Chr2:82172621-82172640 | MsG0280011304.01.T01:intron | 35.0% |
! | CTCACTCATACTTTTCATCA+TGG | + | Chr2:82172623-82172642 | None:intergenic | 35.0% |
!!! | GGAGACAATCTTTTGCTATT+TGG | + | Chr2:82172299-82172318 | None:intergenic | 35.0% |
ATTGCTATCCTTGACACGAA+AGG | + | Chr2:82172235-82172254 | None:intergenic | 40.0% | |
CATTGCTGCCCACATAAAAA+AGG | - | Chr2:82173061-82173080 | MsG0280011304.01.T01:intron | 40.0% | |
CCTTATCTCCAAGAACTGAA+AGG | + | Chr2:82172906-82172925 | None:intergenic | 40.0% | |
CCTTTCAGTTCTTGGAGATA+AGG | - | Chr2:82172903-82172922 | MsG0280011304.01.T01:intron | 40.0% | |
GCTTGAATCTGCATCTTAGT+TGG | + | Chr2:82172987-82173006 | None:intergenic | 40.0% | |
TAAGATGCAGATTCAAGCCA+TGG | - | Chr2:82172989-82173008 | MsG0280011304.01.T01:intron | 40.0% | |
TTGCTATCCTTGACACGAAA+GGG | + | Chr2:82172234-82172253 | None:intergenic | 40.0% | |
! | AAGCACTGTACTAGATAACC+TGG | + | Chr2:82172556-82172575 | None:intergenic | 40.0% |
!!! | CTTTTTTATGTGGGCAGCAA+TGG | + | Chr2:82173063-82173082 | None:intergenic | 40.0% |
ACCTGGTGAGGCCAAAATAA+AGG | + | Chr2:82172539-82172558 | None:intergenic | 45.0% | |
ACTTTCACCCTTTCGTGTCA+AGG | - | Chr2:82172224-82172243 | MsG0280011304.01.T01:intron | 45.0% | |
AGACAACATGAGTGACGACA+AGG | - | Chr2:82172596-82172615 | MsG0280011304.01.T01:intron | 45.0% | |
CTGTACTAGATAACCTGGTG+AGG | + | Chr2:82172551-82172570 | None:intergenic | 45.0% | |
GTATCAGTGCTAGCGTGATA+TGG | - | Chr2:82172744-82172763 | MsG0280011304.01.T01:intron | 45.0% | |
TTGACACGAAAGGGTGAAAG+TGG | + | Chr2:82172225-82172244 | None:intergenic | 45.0% | |
! | AGCTTCAGAAGCATAAGCCA+TGG | + | Chr2:82173009-82173028 | None:intergenic | 45.0% |
!!! | TCCTTTATTTTGGCCTCACC+AGG | - | Chr2:82172535-82172554 | MsG0280011304.01.T01:intron | 45.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
Chr2 | gene | 82171911 | 82173160 | 82171911 | ID=MsG0280011304.01;Name=MsG0280011304.01 |
Chr2 | mRNA | 82171911 | 82173160 | 82171911 | ID=MsG0280011304.01.T01;Parent=MsG0280011304.01;Name=MsG0280011304.01.T01;_AED=0.46;_eAED=0.68;_QI=0|0|0|0.5|0|0|2|0|91 |
Chr2 | exon | 82173121 | 82173160 | 82173121 | ID=MsG0280011304.01.T01:exon:12414;Parent=MsG0280011304.01.T01 |
Chr2 | exon | 82171911 | 82172146 | 82171911 | ID=MsG0280011304.01.T01:exon:12413;Parent=MsG0280011304.01.T01 |
Chr2 | CDS | 82173121 | 82173160 | 82173121 | ID=MsG0280011304.01.T01:cds;Parent=MsG0280011304.01.T01 |
Chr2 | CDS | 82171911 | 82172146 | 82171911 | ID=MsG0280011304.01.T01:cds;Parent=MsG0280011304.01.T01 |
Gene Sequence |
Protein sequence |