AlfalfaGEDB | MsG0280011330.01

M. sativa cultivar ZhongmuNo.1 / MsG0280011330.01

KEGG: -
GO: -
PFAM: PF04844

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011330.01.T01	XP_003597774.1	98.936	282	2	1	1	281	30	311	0	572

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011330.01.T01	Q9S7T5	36.879	282	127	9	6	270	41	288	6.98E-42	148

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011330.01.T01	G7II51	98.936	282	2	1	1	281	30	311	0.0	572

TFs/TRs:

Gene ID	Type	Classification
MsG0280011330.01.T01	TF	OFP

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048464.01	MsG0280011330.01	0.807568	4.744412e-50	2.651406e-47
MsG0180000114.01	MsG0280011330.01	0.807518	4.860255e-50	2.712795e-47
MsG0180000247.01	MsG0280011330.01	0.800763	1.237409e-48	5.809211e-46
MsG0180000604.01	MsG0280011330.01	0.845732	3.381110e-59	5.688872e-56
MsG0180000680.01	MsG0280011330.01	0.825562	4.381921e-54	4.008044e-51
MsG0180000702.01	MsG0280011330.01	0.811220	7.805315e-51	4.803939e-48
MsG0180000703.01	MsG0280011330.01	0.807647	4.564444e-50	2.556058e-47
MsG0180001088.01	MsG0280011330.01	0.804413	2.186591e-49	1.126650e-46
MsG0180001311.01	MsG0280011330.01	0.810319	1.222829e-50	7.347820e-48
MsG0180001662.01	MsG0280011330.01	0.800274	1.556350e-48	7.216656e-46
MsG0180002952.01	MsG0280011330.01	0.800052	1.726604e-48	7.961116e-46
MsG0180002955.01	MsG0280011330.01	0.837014	6.673838e-57	8.557808e-54
MsG0180003807.01	MsG0280011330.01	0.821915	3.131321e-53	2.582128e-50
MsG0180004385.01	MsG0280011330.01	0.833884	4.126000e-56	4.815959e-53
MsG0180004390.01	MsG0280011330.01	0.803201	3.902974e-49	1.949417e-46
MsG0180004486.01	MsG0280011330.01	0.816026	6.835805e-52	4.789651e-49
MsG0180005185.01	MsG0280011330.01	0.805571	1.251614e-49	6.644323e-47
MsG0180005220.01	MsG0280011330.01	0.809638	1.713623e-50	1.011571e-47
MsG0180005240.01	MsG0280011330.01	0.801351	9.381514e-49	4.470489e-46
MsG0180005354.01	MsG0280011330.01	0.820119	8.114756e-53	6.365264e-50
MsG0180005730.01	MsG0280011330.01	0.806500	7.983256e-50	4.339887e-47
MsG0180005960.01	MsG0280011330.01	0.810231	1.277257e-50	7.657146e-48
MsG0180006104.01	MsG0280011330.01	0.818136	2.294590e-52	1.703327e-49
MsG0180006134.01	MsG0280011330.01	0.827308	1.681199e-54	1.616967e-51
MsG0280010598.01	MsG0280011330.01	0.855504	6.033830e-62	1.396028e-58
MsG0280010599.01	MsG0280011330.01	0.846574	1.994454e-59	3.447861e-56
MsG0280010722.01	MsG0280011330.01	0.801774	7.682660e-49	3.700198e-46
MsG0280010916.01	MsG0280011330.01	0.805618	1.223747e-49	6.504191e-47
MsG0280011216.01	MsG0280011330.01	0.808913	2.451999e-50	1.419509e-47
MsG0280011330.01	MsG0280011376.01	0.830598	2.683000e-55	2.840060e-52
MsG0280011330.01	MsG0380012034.01	0.811699	6.143462e-51	3.828966e-48
MsG0280011330.01	MsG0380012085.01	0.821525	3.854999e-53	3.143750e-50
MsG0280011330.01	MsG0380012091.01	0.822481	2.314998e-53	1.940066e-50
MsG0280011330.01	MsG0380012184.01	0.810134	1.340234e-50	8.014582e-48
MsG0280011330.01	MsG0380012319.01	0.808474	3.042161e-50	1.741147e-47
MsG0280011330.01	MsG0380012331.01	0.825107	5.614310e-54	5.069388e-51
MsG0280011330.01	MsG0380012362.01	0.822672	2.090273e-53	1.761290e-50
MsG0280011330.01	MsG0380012365.01	0.826034	3.385691e-54	3.138784e-51
MsG0280011330.01	MsG0380013686.01	0.822897	1.852859e-53	1.571187e-50
MsG0280011330.01	MsG0380013853.01	0.801964	7.021972e-49	3.398262e-46
MsG0280011330.01	MsG0380014727.01	0.847828	9.034583e-60	1.625906e-56
MsG0280011330.01	MsG0380014866.01	0.831956	1.244018e-55	1.370947e-52
MsG0280011330.01	MsG0380014880.01	0.804226	2.391081e-49	1.226112e-46
MsG0280011330.01	MsG0380015215.01	-0.831021	2.113161e-55	2.264967e-52
MsG0280011330.01	MsG0380015220.01	0.814721	1.333483e-51	9.016387e-49
MsG0280011330.01	MsG0380015374.01	0.837240	5.840068e-57	7.539671e-54
MsG0280011330.01	MsG0380015745.01	0.842074	3.227638e-58	4.838194e-55
MsG0280011330.01	MsG0380015804.01	0.807762	4.315061e-50	2.423713e-47
MsG0280011330.01	MsG0380015810.01	0.828335	9.521017e-55	9.434661e-52
MsG0280011330.01	MsG0380015893.01	0.806508	7.949299e-50	4.322429e-47
MsG0280011330.01	MsG0380016566.01	0.836091	1.146669e-56	1.430113e-53
MsG0280011330.01	MsG0380016740.01	0.861793	7.994104e-64	2.288739e-60
MsG0280011330.01	MsG0380017229.01	0.818154	2.272394e-52	1.687692e-49
MsG0280011330.01	MsG0380017322.01	0.815750	7.876330e-52	5.477393e-49
MsG0280011330.01	MsG0380017528.01	0.824791	6.665922e-54	5.965410e-51
MsG0280011330.01	MsG0480018606.01	0.830675	2.569546e-55	2.726238e-52
MsG0280011330.01	MsG0480019035.01	0.804263	2.349395e-49	1.205883e-46
MsG0280011330.01	MsG0480019453.01	0.838136	3.440876e-57	4.566025e-54
MsG0280011330.01	MsG0480019772.01	0.811318	7.432615e-51	4.586129e-48
MsG0280011330.01	MsG0480019970.01	0.826725	2.316758e-54	2.190506e-51
MsG0280011330.01	MsG0480020024.01	0.812908	3.345928e-51	2.153877e-48
MsG0280011330.01	MsG0480020505.01	0.825016	5.897885e-54	5.312034e-51
MsG0280011330.01	MsG0480021592.01	0.807850	4.131647e-50	2.326026e-47
MsG0280011330.01	MsG0480021900.01	0.800035	1.740912e-48	8.023493e-46
MsG0280011330.01	MsG0480021998.01	0.837100	6.343571e-57	8.154875e-54
MsG0280011330.01	MsG0480022068.01	0.800531	1.379841e-48	6.439946e-46
MsG0280011330.01	MsG0480022169.01	0.810599	1.064069e-50	6.441644e-48
MsG0280011330.01	MsG0480022330.01	0.819214	1.306302e-52	9.989879e-50
MsG0280011330.01	MsG0480022933.01	0.805982	1.026174e-49	5.505651e-47
MsG0280011330.01	MsG0480023251.01	0.838024	3.676095e-57	4.862527e-54
MsG0280011330.01	MsG0480023670.01	0.824413	8.181749e-54	7.241297e-51
MsG0280011330.01	MsG0480023729.01	0.804462	2.135646e-49	1.101804e-46
MsG0280011330.01	MsG0480023937.01	0.830329	3.123114e-55	3.280059e-52
MsG0280011330.01	MsG0580024121.01	0.813907	2.018553e-51	1.335039e-48
MsG0280011330.01	MsG0580024433.01	0.802097	6.595789e-49	3.202963e-46
MsG0280011330.01	MsG0580024596.01	0.812679	3.754906e-51	2.402635e-48
MsG0280011330.01	MsG0580024829.01	0.832237	1.060353e-55	1.178025e-52
MsG0280011330.01	MsG0580024862.01	0.807736	4.368573e-50	2.452248e-47
MsG0280011330.01	MsG0580026032.01	0.808250	3.396155e-50	1.932391e-47
MsG0280011330.01	MsG0580026067.01	0.838815	2.298171e-57	3.113759e-54
MsG0280011330.01	MsG0580027923.01	0.841780	3.861517e-58	5.734469e-55
MsG0280011330.01	MsG0580028459.01	0.839646	1.399423e-57	1.944847e-54
MsG0280011330.01	MsG0580029195.01	0.828669	7.906065e-55	7.911121e-52
MsG0280011330.01	MsG0580029622.01	0.801594	8.364001e-49	4.009945e-46
MsG0280011330.01	MsG0580029880.01	0.801517	8.673875e-49	4.150670e-46
MsG0280011330.01	MsG0580029919.01	0.814939	1.193101e-51	8.114330e-49
MsG0280011330.01	MsG0680030616.01	0.803224	3.860545e-49	1.929359e-46
MsG0280011330.01	MsG0680030677.01	0.824322	8.596793e-54	7.588795e-51
MsG0280011330.01	MsG0680033465.01	0.844701	6.422859e-59	1.045495e-55
MsG0280011330.01	MsG0680034235.01	0.805308	1.421206e-49	7.493805e-47
MsG0280011330.01	MsG0680034655.01	0.804026	2.631844e-49	1.342742e-46
MsG0280011330.01	MsG0680035580.01	0.804193	2.429263e-49	1.244645e-46
MsG0280011330.01	MsG0680035773.01	0.824065	9.874725e-54	8.654238e-51
MsG0280011330.01	MsG0680035844.01	0.809286	2.040178e-50	1.193011e-47
MsG0280011330.01	MsG0780036117.01	0.834362	3.132375e-56	3.708879e-53
MsG0280011330.01	MsG0780036438.01	0.808781	2.615697e-50	1.509012e-47
MsG0280011330.01	MsG0780038092.01	0.823216	1.560392e-53	1.335150e-50
MsG0280011330.01	MsG0780038644.01	0.880012	7.790251e-70	4.319303e-66
MsG0280011330.01	MsG0780038833.01	0.816946	4.255027e-52	3.057495e-49
MsG0280011330.01	MsG0780038907.01	0.803273	3.771511e-49	1.887228e-46
MsG0280011330.01	MsG0780039218.01	0.804764	1.847209e-49	9.604982e-47
MsG0280011330.01	MsG0780039573.01	0.834315	3.217124e-56	3.804091e-53
MsG0280011330.01	MsG0780039777.01	0.814264	1.683023e-51	1.123991e-48
MsG0280011330.01	MsG0780039832.01	0.803287	3.746854e-49	1.875516e-46
MsG0280011330.01	MsG0780040176.01	0.827812	1.272026e-54	1.241376e-51
MsG0280011330.01	MsG0780040254.01	0.823261	1.523603e-53	1.305299e-50
MsG0280011330.01	MsG0780040664.01	0.806579	7.681910e-50	4.184447e-47
MsG0280011330.01	MsG0780041187.01	0.804462	2.135646e-49	1.101804e-46
MsG0280011330.01	MsG0780041432.01	0.816902	4.351507e-52	3.122858e-49
MsG0280011330.01	MsG0880044573.01	0.821229	4.512137e-53	3.649644e-50
MsG0280011330.01	MsG0880044705.01	0.802602	5.190897e-49	2.553381e-46
MsG0280011330.01	MsG0880045544.01	0.829120	6.147787e-55	6.233599e-52
MsG0280011330.01	MsG0880045756.01	0.814297	1.655149e-51	1.106403e-48
MsG0280011330.01	MsG0880045926.01	0.800116	1.675757e-48	7.739161e-46
MsG0280011330.01	MsG0880046809.01	0.808554	2.925628e-50	1.677873e-47
MsG0280011330.01	MsG0880046890.01	0.817209	3.713419e-52	2.687360e-49
MsG0280011330.01	MsG0880046967.01	0.802016	6.852276e-49	3.320680e-46
MsG0280011330.01	MsG0880047267.01	0.801588	8.389842e-49	4.021690e-46
MsG0280011330.01	MsG0880047285.01	-0.854340	1.313521e-61	2.923957e-58
MsG0280011330.01	MsG0880047294.01	0.832050	1.178933e-55	1.302784e-52
MsG0280006669.01	MsG0280011330.01	0.816311	5.904458e-52	4.169571e-49
MsG0280006753.01	MsG0280011330.01	-0.803069	4.156752e-49	2.069038e-46
MsG0280007537.01	MsG0280011330.01	0.805966	1.034342e-49	5.547047e-47
MsG0280007691.01	MsG0280011330.01	0.834559	2.794293e-56	3.328340e-53
MsG0280007756.01	MsG0280011330.01	0.818446	1.952135e-52	1.461748e-49
MsG0280008030.01	MsG0280011330.01	0.807099	5.963491e-50	3.292282e-47
MsG0280008113.01	MsG0280011330.01	0.824473	7.918132e-54	7.020384e-51
MsG0280008765.01	MsG0280011330.01	0.806340	8.628097e-50	4.671309e-47
MsG0280008894.01	MsG0280011330.01	0.818900	1.540105e-52	1.167690e-49
MsG0280008932.01	MsG0280011330.01	0.839780	1.291369e-57	1.802132e-54
MsG0280009507.01	MsG0280011330.01	0.803627	3.185562e-49	1.608605e-46
MsG0280009754.01	MsG0280011330.01	0.821876	3.198462e-53	2.634557e-50
MsG0280010158.01	MsG0280011330.01	0.829176	5.958510e-55	6.052042e-52
MsG0280010349.01	MsG0280011330.01	0.809401	1.927006e-50	1.130321e-47
MsG0280010517.01	MsG0280011330.01	0.841786	3.846281e-58	5.712917e-55

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011330.01.T01	MTR_2g102140	98.936	282	2	1	1	281	30	311	0.0	572
MsG0280011330.01.T01	MTR_4g012060	46.996	283	121	6	2	281	34	290	3.74e-68	213
MsG0280011330.01.T01	MTR_1g072110	38.462	143	63	5	108	243	110	234	1.68e-18	82.8
MsG0280011330.01.T01	MTR_7g095150	47.887	71	35	1	173	243	132	200	2.79e-15	73.2
MsG0280011330.01.T01	MTR_1g111640	28.340	247	95	9	1	240	27	198	1.50e-12	66.2
MsG0280011330.01.T01	MTR_1g103640	42.188	64	34	1	178	241	117	177	3.20e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280011330.01.T01	AT1G79960	36.879	282	127	9	6	270	41	288	7.12e-43	148
MsG0280011330.01.T01	AT5G04820	35.338	133	62	4	109	241	102	210	2.24e-14	71.6
MsG0280011330.01.T01	AT4G14860	43.284	67	31	2	179	243	109	170	1.39e-11	62.4

Find 46 sgRNAs with CRISPR-Local

Find 55 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGCAGGTTACCATAGAATT+TGG	0.233067	2:+82499852	MsG0280011330.01.T01:CDS
CGAGTCCTTACGATGATTTC+AGG	0.250240	2:+82499577	MsG0280011330.01.T01:CDS
GAAAATTGATTGGGACTTCA+TGG	0.309098	2:+82499656	MsG0280011330.01.T01:CDS
CAGGAACCACCAATACGTTT+TGG	0.387081	2:-82499288	None:intergenic
TTTGTTGTTATTGTCGTTAA+CGG	0.389175	2:-82499115	None:intergenic
ACAATCAAAGGAAAATTGAT+TGG	0.389239	2:+82499646	MsG0280011330.01.T01:CDS
CTAAGAGGAACCAAATTCTA+TGG	0.390296	2:-82499862	None:intergenic
CAGGCGATCAATGCAAGAAT+TGG	0.391866	2:+82499596	MsG0280011330.01.T01:CDS
ATTGTCGTTAACGGCGTTAG+AGG	0.410961	2:-82499106	None:intergenic
TATTGGTGGTTCCTGGTTGT+TGG	0.439269	2:+82499296	MsG0280011330.01.T01:CDS
TTAGGATTGGTAGGGAAGTC+AGG	0.440786	2:+82499817	MsG0280011330.01.T01:CDS
CAAAACGTATTGGTGGTTCC+TGG	0.454127	2:+82499289	MsG0280011330.01.T01:CDS
TTGATCTCATCACTGTTATG+AGG	0.467638	2:+82499748	MsG0280011330.01.T01:CDS
GAATTGGTGGAATCAAAGTA+TGG	0.467801	2:+82499612	MsG0280011330.01.T01:CDS
GAAGAATTCAGAGGCTGCTC+CGG	0.469764	2:+82499770	MsG0280011330.01.T01:CDS
CGATTAACCAAAATGCTCTC+TGG	0.470779	2:+82499027	None:intergenic
CGTGTAGCGTGAGAACTGTT+AGG	0.472831	2:+82499799	MsG0280011330.01.T01:CDS
AGGTAACTCAGGATCATTGA+TGG	0.483746	2:+82499386	MsG0280011330.01.T01:CDS
ACACCACCTCAAGATCTTTG+TGG	0.490451	2:+82499339	MsG0280011330.01.T01:CDS
CAATCAAAGGAAAATTGATT+GGG	0.491479	2:+82499647	MsG0280011330.01.T01:CDS
TGAAATTCTCAAAGAGAAAA+CGG	0.493044	2:-82499170	None:intergenic
ATCAATGATCCTGAGTTACC+TGG	0.499280	2:-82499384	None:intergenic
AACAGCATCACCTTCAAAAG+AGG	0.511692	2:+82499479	MsG0280011330.01.T01:CDS
TGAGAACTGTTAGGATTGGT+AGG	0.512241	2:+82499808	MsG0280011330.01.T01:CDS
GCGATCAATGCAAGAATTGG+TGG	0.527393	2:+82499599	MsG0280011330.01.T01:CDS
CTGAAATCATCGTAAGGACT+CGG	0.533629	2:-82499576	None:intergenic
AAATTCTATGGTAACCTGCT+TGG	0.538786	2:-82499850	None:intergenic
CTCACGCTACACGGCTTCGC+CGG	0.538841	2:-82499789	None:intergenic
GAGGAACCACCAAAACGTAT+TGG	0.549662	2:+82499279	MsG0280011330.01.T01:CDS
GCACGATTCTTCGTGAAACC+AGG	0.558059	2:+82499366	MsG0280011330.01.T01:CDS
TATGTTTCTGCCGTTATCCA+AGG	0.558329	2:-82499079	None:intergenic
CTAACAGTTCTCACGCTACA+CGG	0.576486	2:-82499798	None:intergenic
TTCGTGAAACCAGGTAACTC+AGG	0.588008	2:+82499375	MsG0280011330.01.T01:CDS
AGCGTGAGAACTGTTAGGAT+TGG	0.588361	2:+82499804	MsG0280011330.01.T01:CDS
CAGGAAGAAGAAGACCAAGC+AGG	0.606262	2:+82499836	MsG0280011330.01.T01:CDS
TCTCGGTGACTCCAACAACC+AGG	0.608261	2:-82499307	None:intergenic
GTAAGATTGAAAACAATCAA+AGG	0.608557	2:+82499634	MsG0280011330.01.T01:CDS
GAACCACCAAAACGTATTGG+TGG	0.614019	2:+82499282	MsG0280011330.01.T01:CDS
GCTGAGCCACAAAGATCTTG+AGG	0.618030	2:-82499345	None:intergenic
GATCGCCTGAAATCATCGTA+AGG	0.625029	2:-82499582	None:intergenic
TGTGATGATTGTGATCATCA+TGG	0.625055	2:-82499515	None:intergenic
GAGAACTGTTAGGATTGGTA+GGG	0.631326	2:+82499809	MsG0280011330.01.T01:CDS
GGTGGTGTTGTAATGAATCT+CGG	0.636568	2:-82499324	None:intergenic
AATTGATTGGGACTTCATGG+AGG	0.677814	2:+82499659	MsG0280011330.01.T01:CDS
TGTTATGAGGAAGAATTCAG+AGG	0.682074	2:+82499761	MsG0280011330.01.T01:CDS
GAGCCACAAAGATCTTGAGG+TGG	0.753269	2:-82499342	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!	ACAATCAAAGGAAAATTGAT+TGG	+	Chr2:82499646-82499665	MsG0280011330.01.T01:CDS	25.0%
!	CAACAAAAACAAAAGAATCT+CGG	+	Chr2:82499242-82499261	MsG0280011330.01.T01:CDS	25.0%
!	CAATCAAAGGAAAATTGATT+GGG	+	Chr2:82499647-82499666	MsG0280011330.01.T01:CDS	25.0%
!	GTAAGATTGAAAACAATCAA+AGG	+	Chr2:82499634-82499653	MsG0280011330.01.T01:CDS	25.0%
!	TGAAATTCTCAAAGAGAAAA+CGG	-	Chr2:82499173-82499192	None:intergenic	25.0%
!!!	TTTGTTGTTATTGTCGTTAA+CGG	-	Chr2:82499118-82499137	None:intergenic	25.0%
!	AAGGAAAAAGATGGTGTTTT+GGG	-	Chr2:82499063-82499082	None:intergenic	30.0%
!	ACTACAATAACCTCTTTTGA+AGG	-	Chr2:82499492-82499511	None:intergenic	30.0%
	AAATTCTATGGTAACCTGCT+TGG	-	Chr2:82499853-82499872	None:intergenic	35.0%
	AAGCAGGTTACCATAGAATT+TGG	+	Chr2:82499852-82499871	MsG0280011330.01.T01:CDS	35.0%
	CTAAGAGGAACCAAATTCTA+TGG	-	Chr2:82499865-82499884	None:intergenic	35.0%
	GAAAATTGATTGGGACTTCA+TGG	+	Chr2:82499656-82499675	MsG0280011330.01.T01:CDS	35.0%
	GAATTGGTGGAATCAAAGTA+TGG	+	Chr2:82499612-82499631	MsG0280011330.01.T01:CDS	35.0%
	TGTGATGATTGTGATCATCA+TGG	-	Chr2:82499518-82499537	None:intergenic	35.0%
	TGTTATGAGGAAGAATTCAG+AGG	+	Chr2:82499761-82499780	MsG0280011330.01.T01:CDS	35.0%
	TTGATCTCATCACTGTTATG+AGG	+	Chr2:82499748-82499767	MsG0280011330.01.T01:CDS	35.0%
!	AACAGTGCAACACAATTTTC+AGG	-	Chr2:82499546-82499565	None:intergenic	35.0%
!	CAAAACACCATCTTTTTCCT+TGG	+	Chr2:82499062-82499081	MsG0280011330.01.T01:CDS	35.0%
!	CAAGGAAAAAGATGGTGTTT+TGG	-	Chr2:82499064-82499083	None:intergenic	35.0%
!	CCATCTTTTTCCTTGGATAA+CGG	+	Chr2:82499069-82499088	MsG0280011330.01.T01:CDS	35.0%
	AACAGCATCACCTTCAAAAG+AGG	+	Chr2:82499479-82499498	MsG0280011330.01.T01:CDS	40.0%
	AATTGATTGGGACTTCATGG+AGG	+	Chr2:82499659-82499678	MsG0280011330.01.T01:CDS	40.0%
	AGGTAACTCAGGATCATTGA+TGG	+	Chr2:82499386-82499405	MsG0280011330.01.T01:CDS	40.0%
	ATCAATGATCCTGAGTTACC+TGG	-	Chr2:82499387-82499406	None:intergenic	40.0%
	CCGTTATCCAAGGAAAAAGA+TGG	-	Chr2:82499072-82499091	None:intergenic	40.0%
	CTCGGATGAAAAAAACAACG+AGG	+	Chr2:82499260-82499279	MsG0280011330.01.T01:CDS	40.0%
	CTGAAATCATCGTAAGGACT+CGG	-	Chr2:82499579-82499598	None:intergenic	40.0%
!	GAGAACTGTTAGGATTGGTA+GGG	+	Chr2:82499809-82499828	MsG0280011330.01.T01:CDS	40.0%
!	TATGTTTCTGCCGTTATCCA+AGG	-	Chr2:82499082-82499101	None:intergenic	40.0%
!	TGAGAACTGTTAGGATTGGT+AGG	+	Chr2:82499808-82499827	MsG0280011330.01.T01:CDS	40.0%
!!	GGTGGTGTTGTAATGAATCT+CGG	-	Chr2:82499327-82499346	None:intergenic	40.0%
	ACACCACCTCAAGATCTTTG+TGG	+	Chr2:82499339-82499358	MsG0280011330.01.T01:CDS	45.0%
	AGCGTGAGAACTGTTAGGAT+TGG	+	Chr2:82499804-82499823	MsG0280011330.01.T01:CDS	45.0%
	ATTGTCGTTAACGGCGTTAG+AGG	-	Chr2:82499109-82499128	None:intergenic	45.0%
	CAGGCGATCAATGCAAGAAT+TGG	+	Chr2:82499596-82499615	MsG0280011330.01.T01:CDS	45.0%
	CGAGTCCTTACGATGATTTC+AGG	+	Chr2:82499577-82499596	MsG0280011330.01.T01:CDS	45.0%
	CTAACAGTTCTCACGCTACA+CGG	-	Chr2:82499801-82499820	None:intergenic	45.0%
	GAACCACCAAAACGTATTGG+TGG	+	Chr2:82499282-82499301	MsG0280011330.01.T01:CDS	45.0%
	GAGGAACCACCAAAACGTAT+TGG	+	Chr2:82499279-82499298	MsG0280011330.01.T01:CDS	45.0%
	GATCGCCTGAAATCATCGTA+AGG	-	Chr2:82499585-82499604	None:intergenic	45.0%
	GCGATCAATGCAAGAATTGG+TGG	+	Chr2:82499599-82499618	MsG0280011330.01.T01:CDS	45.0%
	TTCGTGAAACCAGGTAACTC+AGG	+	Chr2:82499375-82499394	MsG0280011330.01.T01:CDS	45.0%
!	CAAAACGTATTGGTGGTTCC+TGG	+	Chr2:82499289-82499308	MsG0280011330.01.T01:CDS	45.0%
!	CAGGAACCACCAATACGTTT+TGG	-	Chr2:82499291-82499310	None:intergenic	45.0%
!	GAACCACCAATACGTTTTGG+TGG	-	Chr2:82499288-82499307	None:intergenic	45.0%
!	TATTGGTGGTTCCTGGTTGT+TGG	+	Chr2:82499296-82499315	MsG0280011330.01.T01:CDS	45.0%
!	TTAGGATTGGTAGGGAAGTC+AGG	+	Chr2:82499817-82499836	MsG0280011330.01.T01:CDS	45.0%
	CAGGAAGAAGAAGACCAAGC+AGG	+	Chr2:82499836-82499855	MsG0280011330.01.T01:CDS	50.0%
	CGTGTAGCGTGAGAACTGTT+AGG	+	Chr2:82499799-82499818	MsG0280011330.01.T01:CDS	50.0%
	GAAGAATTCAGAGGCTGCTC+CGG	+	Chr2:82499770-82499789	MsG0280011330.01.T01:CDS	50.0%
	GAGCCACAAAGATCTTGAGG+TGG	-	Chr2:82499345-82499364	None:intergenic	50.0%
	GCACGATTCTTCGTGAAACC+AGG	+	Chr2:82499366-82499385	MsG0280011330.01.T01:CDS	50.0%
	GCTGAGCCACAAAGATCTTG+AGG	-	Chr2:82499348-82499367	None:intergenic	50.0%
	TCTCGGTGACTCCAACAACC+AGG	-	Chr2:82499310-82499329	None:intergenic	55.0%
	CTCACGCTACACGGCTTCGC+CGG	-	Chr2:82499792-82499811	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	82499039	82499884	82499039	ID=MsG0280011330.01;Name=MsG0280011330.01
Chr2	mRNA	82499039	82499884	82499039	ID=MsG0280011330.01.T01;Parent=MsG0280011330.01;Name=MsG0280011330.01.T01;_AED=0.16;_eAED=0.16;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|281
Chr2	exon	82499039	82499884	82499039	ID=MsG0280011330.01.T01:exon:2931;Parent=MsG0280011330.01.T01
Chr2	CDS	82499039	82499884	82499039	ID=MsG0280011330.01.T01:cds;Parent=MsG0280011330.01.T01

Gene Sequence

>MsG0280011330.01.T01

ATGCTCTCTGGCTGCAAACATCCCAAAACACCATCTTTTTCCTTGGATAACGGCAGAAACATATCATCCTCTAACGCCGTTAACGACAATAACAACAAAATCAATGATGCTGCAACACTAGCTGACGTTGACCGTTTTCTCTTTGAGAATTTCAAGTCTCTATATTTCAAAGATGATGAAGAAACAGAACAAAACAACAACAACAACAAAAACAAAAGAATCTCGGATGAAAAAAACAACGAGGAACCACCAAAACGTATTGGTGGTTCCTGGTTGTTGGAGTCACCGAGATTCATTACAACACCACCTCAAGATCTTTGTGGCTCAGCACGATTCTTCGTGAAACCAGGTAACTCAGGATCATTGATGGAAGATGCACTGTCTCTAACAAACAGTGATGAAGCTGATTCGAGTAATTCGAATAATTCAAATTCATCATCAACAGCATCACCTTCAAAAGAGGTTATTGTAGTAAACCATGATGATCACAATCATCACACTCTTCCTGAAAATTGTGTTGCACTGTTATCATATTCTCCGAGTCCTTACGATGATTTCAGGCGATCAATGCAAGAATTGGTGGAATCAAAGTATGGTAAGATTGAAAACAATCAAAGGAAAATTGATTGGGACTTCATGGAGGAGATTTTGTTTTGTTATCTTAATGTTAATGAGAAAAAATCTCATAAGTTTATATTAAGTGCTTTTGTTGATCTCATCACTGTTATGAGGAAGAATTCAGAGGCTGCTCCGGCGAAGCCGTGTAGCGTGAGAACTGTTAGGATTGGTAGGGAAGTCAGGAAGAAGAAGACCAAGCAGGTTACCATAGAATTTGGTTCCTCTTAG

Protein sequence

>MsG0280011330.01.T01

MLSGCKHPKTPSFSLDNGRNISSSNAVNDNNNKINDAATLADVDRFLFENFKSLYFKDDEETEQNNNNNKNKRISDEKNNEEPPKRIGGSWLLESPRFITTPPQDLCGSARFFVKPGNSGSLMEDALSLTNSDEADSSNSNNSNSSSTASPSKEVIVVNHDDHNHHTLPENCVALLSYSPSPYDDFRRSMQELVESKYGKIENNQRKIDWDFMEEILFCYLNVNEKKSHKFILSAFVDLITVMRKNSEAAPAKPCSVRTVRIGREVRKKKTKQVTIEFGSS*