AlfalfaGEDB | MsG0580028175.01

M. sativa cultivar ZhongmuNo.1 / MsG0580028175.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028175.01.T01	XP_013443615.1	92.063	189	15	0	1	189	154	342	8.79E-123	363

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028175.01.T01	Q9M2A1	64.583	192	68	0	1	192	171	362	1.16E-85	261

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028175.01.T01	A0A072TVU0	92.063	189	15	0	1	189	154	342	4.20e-123	363

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048332.01	MsG0580028175.01	0.807712	4.420991e-50	2.480038e-47
MsG0080048787.01	MsG0580028175.01	0.823199	1.575311e-53	1.347263e-50
MsG0180000091.01	MsG0580028175.01	0.811500	6.788194e-51	4.208991e-48
MsG0180000114.01	MsG0580028175.01	0.820030	8.504643e-53	6.654179e-50
MsG0180000144.01	MsG0580028175.01	0.813510	2.468459e-51	1.615176e-48
MsG0180000680.01	MsG0580028175.01	0.811289	7.542357e-51	4.650230e-48
MsG0180000703.01	MsG0580028175.01	0.811458	6.930952e-51	4.292700e-48
MsG0180000741.01	MsG0580028175.01	0.800038	1.738491e-48	8.013000e-46
MsG0180000777.01	MsG0580028175.01	0.806162	9.404121e-50	5.068713e-47
MsG0180000787.01	MsG0580028175.01	0.818690	1.718140e-52	1.295044e-49
MsG0180000836.01	MsG0580028175.01	0.809869	1.528984e-50	9.080170e-48
MsG0180001088.01	MsG0580028175.01	0.808337	3.253850e-50	1.855632e-47
MsG0180001311.01	MsG0580028175.01	0.814434	1.543856e-51	1.035838e-48
MsG0180001662.01	MsG0580028175.01	0.828516	8.608735e-55	8.576307e-52
MsG0180002664.01	MsG0580028175.01	0.821046	4.971056e-53	4.000848e-50
MsG0180002867.01	MsG0580028175.01	0.800928	1.144802e-48	5.397416e-46
MsG0180003725.01	MsG0580028175.01	0.821393	4.135501e-53	3.360291e-50
MsG0180003807.01	MsG0580028175.01	0.835921	1.266266e-56	1.571026e-53
MsG0180003810.01	MsG0580028175.01	0.821049	4.963409e-53	3.994992e-50
MsG0180003821.01	MsG0580028175.01	0.800570	1.354889e-48	6.329736e-46
MsG0180003885.01	MsG0580028175.01	0.827999	1.147196e-54	1.125810e-51
MsG0180003932.01	MsG0580028175.01	0.828046	1.117566e-54	1.098242e-51
MsG0180004331.01	MsG0580028175.01	0.808174	3.526391e-50	2.002452e-47
MsG0180004465.01	MsG0580028175.01	0.809314	2.011843e-50	1.177310e-47
MsG0180004486.01	MsG0580028175.01	0.814195	1.743190e-51	1.161974e-48
MsG0180004493.01	MsG0580028175.01	0.808208	3.467315e-50	1.970675e-47
MsG0180004500.01	MsG0580028175.01	0.802585	5.232743e-49	2.572838e-46
MsG0180004765.01	MsG0580028175.01	0.811720	6.080333e-51	3.791842e-48
MsG0180005205.01	MsG0580028175.01	0.831860	1.313948e-55	1.443983e-52
MsG0180005220.01	MsG0580028175.01	0.800641	1.310049e-48	6.131534e-46
MsG0180005240.01	MsG0580028175.01	0.807542	4.805280e-50	2.683637e-47
MsG0180005304.01	MsG0580028175.01	0.800513	1.391467e-48	6.491332e-46
MsG0180005445.01	MsG0580028175.01	0.827384	1.611762e-54	1.553767e-51
MsG0180005730.01	MsG0580028175.01	0.806228	9.109425e-50	4.918167e-47
MsG0180005786.01	MsG0580028175.01	0.812896	3.365769e-51	2.165965e-48
MsG0180006017.01	MsG0580028175.01	0.812278	4.594988e-51	2.909159e-48
MsG0180006096.01	MsG0580028175.01	0.814986	1.165089e-51	7.934009e-49
MsG0180006104.01	MsG0580028175.01	0.820085	8.264047e-53	6.475838e-50
MsG0280006309.01	MsG0580028175.01	0.807414	5.114228e-50	2.846845e-47
MsG0280010599.01	MsG0580028175.01	0.852022	6.061816e-61	1.249875e-57
MsG0280010722.01	MsG0580028175.01	0.826674	2.382887e-54	2.249787e-51
MsG0280010753.01	MsG0580028175.01	0.824984	6.002231e-54	5.400977e-51
MsG0280010916.01	MsG0580028175.01	0.819415	1.175759e-52	9.041800e-50
MsG0280010976.01	MsG0580028175.01	0.804363	2.239345e-49	1.152400e-46
MsG0280011109.01	MsG0580028175.01	0.815730	7.960508e-52	5.532837e-49
MsG0280011201.01	MsG0580028175.01	0.805024	1.630141e-49	8.532801e-47
MsG0280011444.01	MsG0580028175.01	0.807851	4.129837e-50	2.325058e-47
MsG0380011669.01	MsG0580028175.01	0.816384	5.684714e-52	4.022194e-49
MsG0380012034.01	MsG0580028175.01	0.806232	9.088791e-50	4.907599e-47
MsG0380012067.01	MsG0580028175.01	0.829131	6.111123e-55	6.198503e-52
MsG0380012371.01	MsG0580028175.01	0.826299	2.927833e-54	2.734869e-51
MsG0380013686.01	MsG0580028175.01	0.807265	5.498966e-50	3.049201e-47
MsG0380014706.01	MsG0580028175.01	0.849435	3.240453e-60	6.142302e-57
MsG0480019035.01	MsG0580028175.01	0.802830	4.656610e-49	2.304119e-46
MsG0480019453.01	MsG0580028175.01	0.850377	1.765955e-60	3.452292e-57
MsG0480019711.01	MsG0580028175.01	0.800663	1.296968e-48	6.073656e-46
MsG0480019772.01	MsG0580028175.01	0.807825	4.183792e-50	2.353853e-47
MsG0480019970.01	MsG0580028175.01	0.825029	5.855517e-54	5.275895e-51
MsG0480020024.01	MsG0580028175.01	0.844820	5.964344e-59	9.745929e-56
MsG0480020499.01	MsG0580028175.01	0.806953	6.403873e-50	3.522110e-47
MsG0480020505.01	MsG0580028175.01	0.841081	5.897675e-58	8.568893e-55
MsG0480020540.01	MsG0580028175.01	0.803753	2.999567e-49	1.519598e-46
MsG0480020788.01	MsG0580028175.01	0.802029	6.809822e-49	3.301177e-46
MsG0480021195.01	MsG0580028175.01	0.809294	2.031297e-50	1.188102e-47
MsG0480021492.01	MsG0580028175.01	0.806526	7.880273e-50	4.286820e-47
MsG0480021534.01	MsG0580028175.01	0.829554	4.825145e-55	4.954778e-52
MsG0480021796.01	MsG0580028175.01	0.816696	4.840449e-52	3.454076e-49
MsG0480021870.01	MsG0580028175.01	0.810200	1.297515e-50	7.772126e-48
MsG0480021918.01	MsG0580028175.01	0.822100	2.837458e-53	2.352030e-50
MsG0480022068.01	MsG0580028175.01	0.800132	1.663557e-48	7.686083e-46
MsG0480022169.01	MsG0580028175.01	0.819912	9.052133e-53	7.058945e-50
MsG0480022514.01	MsG0580028175.01	0.801391	9.205586e-49	4.390981e-46
MsG0480022624.01	MsG0580028175.01	0.800068	1.714272e-48	7.907556e-46
MsG0480022985.01	MsG0580028175.01	0.802007	6.880910e-49	3.333773e-46
MsG0480023172.01	MsG0580028175.01	0.828235	1.006465e-54	9.944674e-52
MsG0480023251.01	MsG0580028175.01	0.800697	1.276119e-48	5.980968e-46
MsG0480023354.01	MsG0580028175.01	0.818477	1.920557e-52	1.439215e-49
MsG0480023377.01	MsG0580028175.01	0.804922	1.712119e-49	8.939398e-47
MsG0480023488.01	MsG0580028175.01	0.826811	2.209869e-54	2.094706e-51
MsG0580024304.01	MsG0580028175.01	0.824508	7.772897e-54	6.898714e-51
MsG0580024781.01	MsG0580028175.01	0.803473	3.428773e-49	1.724561e-46
MsG0580024790.01	MsG0580028175.01	-0.802512	5.415944e-49	2.657962e-46
MsG0580025332.01	MsG0580028175.01	0.813421	2.581489e-51	1.685069e-48
MsG0580025458.01	MsG0580028175.01	0.958384	2.692748e-116	9.954345e-111
MsG0580025460.01	MsG0580028175.01	0.947625	4.672440e-106	8.244104e-101
MsG0580025621.01	MsG0580028175.01	0.812418	4.282430e-51	2.721542e-48
MsG0580025661.01	MsG0580028175.01	0.837850	4.074627e-57	5.360843e-54
MsG0580025922.01	MsG0580028175.01	0.806914	6.527296e-50	3.586394e-47
MsG0580025986.01	MsG0580028175.01	0.807462	4.994582e-50	2.783759e-47
MsG0580025987.01	MsG0580028175.01	0.814264	1.683129e-51	1.124059e-48
MsG0380014948.01	MsG0580028175.01	0.834434	3.004726e-56	3.565486e-53
MsG0380014949.01	MsG0580028175.01	0.801557	8.512670e-49	4.077506e-46
MsG0380015220.01	MsG0580028175.01	0.822459	2.342561e-53	1.961886e-50
MsG0380015300.01	MsG0580028175.01	0.803341	3.651678e-49	1.830401e-46
MsG0380015436.01	MsG0580028175.01	0.803950	2.729139e-49	1.389709e-46
MsG0380015745.01	MsG0580028175.01	0.802929	4.443488e-49	2.203981e-46
MsG0380015930.01	MsG0580028175.01	0.809399	1.928686e-50	1.131257e-47
MsG0380015980.01	MsG0580028175.01	0.804174	2.452242e-49	1.255817e-46
MsG0380016005.01	MsG0580028175.01	0.800939	1.138858e-48	5.370909e-46
MsG0380016387.01	MsG0580028175.01	0.839565	1.469006e-57	2.036416e-54
MsG0380016391.01	MsG0580028175.01	0.805188	1.506269e-49	7.917833e-47
MsG0380016407.01	MsG0580028175.01	0.823300	1.492038e-53	1.279662e-50
MsG0380016505.01	MsG0580028175.01	0.813163	2.941925e-51	1.906701e-48
MsG0380016737.01	MsG0580028175.01	0.826767	2.264717e-54	2.143836e-51
MsG0380016740.01	MsG0580028175.01	0.845536	3.821055e-59	6.387710e-56
MsG0380016923.01	MsG0580028175.01	0.820675	6.050411e-53	4.818658e-50
MsG0380017201.01	MsG0580028175.01	0.809660	1.695307e-50	1.001308e-47
MsG0380017229.01	MsG0580028175.01	0.804421	2.177454e-49	1.122176e-46
MsG0380017244.01	MsG0580028175.01	0.827122	1.862544e-54	1.781511e-51
MsG0380017401.01	MsG0580028175.01	0.822952	1.798979e-53	1.527864e-50
MsG0380017498.01	MsG0580028175.01	0.810909	9.116142e-51	5.564947e-48
MsG0380017528.01	MsG0580028175.01	0.803965	2.709816e-49	1.380348e-46
MsG0380017589.01	MsG0580028175.01	0.838464	2.830862e-57	3.794776e-54
MsG0380018022.01	MsG0580028175.01	0.801574	8.443886e-49	4.046351e-46
MsG0480018251.01	MsG0580028175.01	0.808155	3.558527e-50	2.019663e-47
MsG0480018402.01	MsG0580028175.01	0.801900	7.238701e-49	3.497700e-46
MsG0580026137.01	MsG0580028175.01	0.800909	1.155286e-48	5.444224e-46
MsG0580026439.01	MsG0580028175.01	0.804886	1.741546e-49	9.084975e-47
MsG0580027891.01	MsG0580028175.01	0.816666	4.916564e-52	3.505638e-49
MsG0580028148.01	MsG0580028175.01	0.803901	2.793794e-49	1.420836e-46
MsG0580028175.01	MsG0580028582.01	0.822185	2.711206e-53	2.252830e-50
MsG0580028175.01	MsG0580028918.01	0.825701	4.061028e-54	3.729443e-51
MsG0580028175.01	MsG0580029008.01	0.804819	1.798885e-49	9.367454e-47
MsG0580028175.01	MsG0580029236.01	0.817867	2.638922e-52	1.944517e-49
MsG0580028175.01	MsG0580029376.01	0.838300	3.121712e-57	4.163194e-54
MsG0580028175.01	MsG0580029444.01	0.801950	7.068729e-49	3.419756e-46
MsG0580028175.01	MsG0580029550.01	0.823896	1.081865e-53	9.437006e-51
MsG0580028175.01	MsG0580029647.01	0.854808	9.616036e-62	2.174385e-58
MsG0580028175.01	MsG0580029650.01	0.804972	1.671122e-49	8.736198e-47
MsG0580028175.01	MsG0580029651.01	0.826128	3.216087e-54	2.989559e-51
MsG0580028175.01	MsG0580029704.01	0.801951	7.065599e-49	3.418332e-46
MsG0580028175.01	MsG0580029879.01	0.816990	4.158992e-52	2.992069e-49
MsG0580028175.01	MsG0580029919.01	0.861110	1.291749e-63	3.613724e-60
MsG0580028175.01	MsG0580029921.01	0.815054	1.125019e-51	7.675219e-49
MsG0580028175.01	MsG0580029925.01	0.817195	3.739658e-52	2.705272e-49
MsG0580028175.01	MsG0580030142.01	0.833735	4.495063e-56	5.222846e-53
MsG0580028175.01	MsG0680030515.01	0.806838	6.773125e-50	3.714263e-47
MsG0580028175.01	MsG0680030616.01	0.818544	1.854475e-52	1.392252e-49
MsG0580028175.01	MsG0680030880.01	0.817474	3.236023e-52	2.359119e-49
MsG0580028175.01	MsG0680030881.01	0.801680	8.030636e-49	3.858548e-46
MsG0580028175.01	MsG0680031000.01	0.818690	1.718279e-52	1.295141e-49
MsG0580028175.01	MsG0680033392.01	0.809422	1.907034e-50	1.119243e-47
MsG0580028175.01	MsG0680033465.01	0.803944	2.737814e-49	1.393898e-46
MsG0580028175.01	MsG0680034235.01	0.851743	7.274840e-61	1.486944e-57
MsG0580028175.01	MsG0680034913.01	0.809697	1.664870e-50	9.842568e-48
MsG0580028175.01	MsG0680035005.01	0.800264	1.563596e-48	7.248632e-46
MsG0580028175.01	MsG0680035216.01	0.851180	1.049368e-60	2.106400e-57
MsG0580028175.01	MsG0680035580.01	0.803367	3.606344e-49	1.808890e-46
MsG0580028175.01	MsG0780035937.01	0.845043	5.194661e-59	8.548527e-56
MsG0580028175.01	MsG0780036117.01	0.807290	5.434371e-50	3.015267e-47
MsG0580028175.01	MsG0780036183.01	0.818890	1.547524e-52	1.173018e-49
MsG0580028175.01	MsG0780036773.01	0.804786	1.827750e-49	9.509236e-47
MsG0580028175.01	MsG0780036943.01	0.809128	2.205524e-50	1.284284e-47
MsG0580028175.01	MsG0780037144.01	0.800619	1.324009e-48	6.193254e-46
MsG0580028175.01	MsG0780037330.01	0.811485	6.836557e-51	4.237289e-48
MsG0580028175.01	MsG0780038439.01	0.802516	5.406172e-49	2.653396e-46
MsG0580028175.01	MsG0780038644.01	0.800006	1.764628e-48	8.126899e-46
MsG0580028175.01	MsG0780039155.01	0.820356	7.162939e-53	5.654741e-50
MsG0580028175.01	MsG0780039170.01	0.808213	3.458646e-50	1.965988e-47
MsG0580028175.01	MsG0780039178.01	0.801722	7.872802e-49	3.786729e-46
MsG0580028175.01	MsG0780039369.01	0.818276	2.132927e-52	1.589377e-49
MsG0580028175.01	MsG0780039443.01	0.836758	7.757464e-57	9.871014e-54
MsG0580028175.01	MsG0780039717.01	0.830315	3.147112e-55	3.303844e-52
MsG0580028175.01	MsG0780040664.01	0.807655	4.544945e-50	2.545739e-47
MsG0580028175.01	MsG0780040888.01	0.813061	3.097540e-51	2.002121e-48
MsG0580028175.01	MsG0780041127.01	0.828470	8.832300e-55	8.787183e-52
MsG0580028175.01	MsG0780041229.01	0.819065	1.412236e-52	1.075573e-49
MsG0580028175.01	MsG0780041387.01	0.815166	1.062621e-51	7.271248e-49
MsG0580028175.01	MsG0780041435.01	0.826309	2.912132e-54	2.720989e-51
MsG0580028175.01	MsG0780041475.01	0.808043	3.759308e-50	2.127189e-47
MsG0580028175.01	MsG0780041482.01	0.845972	2.909213e-59	4.932902e-56
MsG0580028175.01	MsG0780041634.01	0.805309	1.420342e-49	7.489556e-47
MsG0580028175.01	MsG0780041729.01	-0.818508	1.889485e-52	1.417101e-49
MsG0580028175.01	MsG0880041854.01	0.821832	3.273862e-53	2.693329e-50
MsG0580028175.01	MsG0880042520.01	0.810015	1.421762e-50	8.476373e-48
MsG0580028175.01	MsG0880043157.01	0.802214	6.239471e-49	3.038946e-46
MsG0580028175.01	MsG0880043162.01	0.806177	9.334597e-50	5.033206e-47
MsG0580028175.01	MsG0880043480.01	0.821442	4.027904e-53	3.277328e-50
MsG0580028175.01	MsG0880043521.01	0.811568	6.559063e-51	4.074083e-48
MsG0580028175.01	MsG0880044573.01	0.802560	5.294899e-49	2.601679e-46
MsG0580028175.01	MsG0880044948.01	0.815365	9.597441e-52	6.603650e-49
MsG0580028175.01	MsG0880045111.01	0.805721	1.164431e-49	6.205791e-47
MsG0580028175.01	MsG0880045460.01	0.813751	2.184247e-51	1.438530e-48
MsG0580028175.01	MsG0880045613.01	0.804675	1.927560e-49	9.999483e-47
MsG0580028175.01	MsG0880045765.01	0.819628	1.050849e-52	8.129355e-50
MsG0580028175.01	MsG0880046724.01	0.800418	1.455031e-48	6.771725e-46
MsG0580028175.01	MsG0880046901.01	0.802225	6.207311e-49	3.024086e-46
MsG0580028175.01	MsG0880047052.01	0.801456	8.928525e-49	4.265805e-46
MsG0580028175.01	MsG0880047696.01	0.863588	2.236204e-64	6.814347e-61
MsG0280006461.01	MsG0580028175.01	0.818055	2.393299e-52	1.772589e-49
MsG0280006601.01	MsG0580028175.01	0.829481	5.026598e-55	5.150860e-52
MsG0280006679.01	MsG0580028175.01	0.814676	1.364805e-51	9.216607e-49
MsG0280006930.01	MsG0580028175.01	0.802051	6.739052e-49	3.268762e-46
MsG0280007066.01	MsG0580028175.01	0.801985	6.951869e-49	3.366201e-46
MsG0280007480.01	MsG0580028175.01	0.807454	5.016412e-50	2.795273e-47
MsG0280007496.01	MsG0580028175.01	0.811623	6.381437e-51	3.969353e-48
MsG0280007531.01	MsG0580028175.01	0.807780	4.276350e-50	2.403153e-47
MsG0280007691.01	MsG0580028175.01	0.802347	5.857440e-49	2.862711e-46
MsG0280008100.01	MsG0580028175.01	0.832925	7.156930e-56	8.116124e-53
MsG0280008234.01	MsG0580028175.01	0.818713	1.697867e-52	1.280570e-49
MsG0280008257.01	MsG0580028175.01	0.821964	3.051068e-53	2.519339e-50
MsG0280008363.01	MsG0580028175.01	0.822516	2.271997e-53	1.905999e-50
MsG0280008738.01	MsG0580028175.01	0.808851	2.527892e-50	1.461054e-47
MsG0280008765.01	MsG0580028175.01	0.838646	2.541212e-57	3.425588e-54
MsG0280008932.01	MsG0580028175.01	0.810855	9.367609e-51	5.710072e-48
MsG0280010109.01	MsG0580028175.01	0.852483	4.482810e-61	9.380155e-58
MsG0280010158.01	MsG0580028175.01	0.854234	1.409819e-61	3.127986e-58
MsG0280010184.01	MsG0580028175.01	0.835396	1.719727e-56	2.100429e-53
MsG0280010349.01	MsG0580028175.01	0.837788	4.226542e-57	5.550313e-54
MsG0280010350.01	MsG0580028175.01	0.850340	1.809061e-60	3.532099e-57
MsG0280010411.01	MsG0580028175.01	0.823461	1.367956e-53	1.178585e-50
MsG0280010517.01	MsG0580028175.01	0.823360	1.444113e-53	1.240598e-50

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028175.01.T01	MTR_0004s0610	92.063	189	15	0	1	189	154	342	1.07e-126	363
MsG0580028175.01.T01	MTR_1g051205	91.979	187	15	0	1	187	153	339	1.48e-125	360
MsG0580028175.01.T01	MTR_5g068170	86.096	187	9	1	1	187	83	252	7.16e-104	301
MsG0580028175.01.T01	MTR_6g034745	72.340	47	13	0	143	189	271	317	2.62e-16	75.9

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0580028175.01.T01	AT3G42630	64.583	192	68	0	1	192	171	362	1.18e-86	261
MsG0580028175.01.T01	AT4G14190	31.928	166	111	2	1	165	256	420	3.07e-14	70.9

Find 38 sgRNAs with CRISPR-Local

Find 43 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AAGAATTTCATTACCTGTTT+TGG	0.192464	5:-76177827	None:intergenic
TTTCGAGAATGGCGCTGTTT+TGG	0.201918	5:+76178172	MsG0580028175.01.T01:CDS
TAGAAGGCTTGGAAGGAATT+TGG	0.229388	5:+76178284	MsG0580028175.01.T01:CDS
GTTCCTGATTTGGTTACTTA+TGG	0.229795	5:+76178237	MsG0580028175.01.T01:CDS
GAAGAGAAAATTCTATGAAT+TGG	0.243285	5:+76177969	MsG0580028175.01.T01:CDS
TTTGTTAGAATGGTTGAATT+AGG	0.246590	5:+76178105	MsG0580028175.01.T01:CDS
TGAGAAGGTGGTTCCTGATT+TGG	0.298398	5:+76178227	MsG0580028175.01.T01:CDS
AATGAAATGGAAAATGCTTA+TGG	0.317533	5:+76177877	MsG0580028175.01.T01:CDS
GATTGATGAAAATGTGATTA+GGG	0.338061	5:+76177924	MsG0580028175.01.T01:CDS
TTGTTAGAATGGTTGAATTA+GGG	0.352168	5:+76178106	MsG0580028175.01.T01:CDS
TTTCAAATAGATTCCAAAAC+AGG	0.356714	5:+76177814	MsG0580028175.01.T01:CDS
GGTCAGTTTGTTAGAGATGT+TGG	0.368673	5:+76177991	MsG0580028175.01.T01:CDS
ATGGAAGGTTTAAGAGATCT+AGG	0.371453	5:+76177896	MsG0580028175.01.T01:CDS
GCAGAGAGAGTTTGTTAGAA+TGG	0.371832	5:+76178095	MsG0580028175.01.T01:CDS
TGATTGATGAAAATGTGATT+AGG	0.372675	5:+76177923	MsG0580028175.01.T01:CDS
GGTTTAGGTAGGAGAAATGT+AGG	0.379552	5:+76178012	MsG0580028175.01.T01:CDS
TTTGTTAGAGATGTTGGTTT+AGG	0.396561	5:+76177997	MsG0580028175.01.T01:CDS
GACGTTTAATATTCGCGCTT+TGG	0.397317	5:+76178146	MsG0580028175.01.T01:CDS
TGGATGCTTACTTGGATAGA+AGG	0.398737	5:+76178268	MsG0580028175.01.T01:CDS
CAACCATAAGTAACCAAATC+AGG	0.419881	5:-76178240	None:intergenic
AAGAGAAAATTCTATGAATT+GGG	0.420495	5:+76177970	MsG0580028175.01.T01:CDS
TTGTGTTGTGGATGCTTACT+TGG	0.434412	5:+76178260	MsG0580028175.01.T01:CDS
ATCAATGAAATGATTTCAAA+GGG	0.437570	5:+76177790	MsG0580028175.01.T01:CDS
ATATTAAACGTCGTAACATC+AGG	0.448111	5:-76178135	None:intergenic
GACGGATCCGTTTGTGTTTG+AGG	0.453067	5:+76178354	MsG0580028175.01.T01:CDS
AATCAATGAAATGATTTCAA+AGG	0.463491	5:+76177789	MsG0580028175.01.T01:CDS
GCTTACTTGGATAGAAGGCT+TGG	0.482566	5:+76178273	MsG0580028175.01.T01:CDS
TTAGAGATGTTGGTTTAGGT+AGG	0.503038	5:+76178001	MsG0580028175.01.T01:CDS
CCTAAAACCTCAAACACAAA+CGG	0.528045	5:-76178361	None:intergenic
TGAAAATGTGATTAGGGCTA+TGG	0.528263	5:+76177930	MsG0580028175.01.T01:CDS
AAATGGAAAATGCTTATGGA+AGG	0.541034	5:+76177881	MsG0580028175.01.T01:CDS
GATTTGTCCACAGTTGTTGA+CGG	0.541478	5:+76178336	MsG0580028175.01.T01:CDS
GGTTACTTATGGTTGTGTTG+TGG	0.542271	5:+76178248	MsG0580028175.01.T01:CDS
ACTTGGATAGAAGGCTTGGA+AGG	0.547884	5:+76178277	MsG0580028175.01.T01:CDS
GTTTAGGTAGGAGAAATGTA+GGG	0.576945	5:+76178013	MsG0580028175.01.T01:CDS
TGAACATATGAGAATTGAGA+AGG	0.590282	5:+76178212	MsG0580028175.01.T01:CDS
AACGGATCCGTCAACAACTG+TGG	0.629929	5:-76178343	None:intergenic
ACATATGAGAATTGAGAAGG+TGG	0.658498	5:+76178215	MsG0580028175.01.T01:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAGAGAAAATTCTATGAATT+GGG	+	Chr5:76177970-76177989	MsG0580028175.01.T01:CDS	20.0%
!!	AATCAATGAAATGATTTCAA+AGG	+	Chr5:76177789-76177808	MsG0580028175.01.T01:CDS	20.0%
!!	ATCAATGAAATGATTTCAAA+GGG	+	Chr5:76177790-76177809	MsG0580028175.01.T01:CDS	20.0%
!	AATGAAATGGAAAATGCTTA+TGG	+	Chr5:76177877-76177896	MsG0580028175.01.T01:CDS	25.0%
!	GAAGAGAAAATTCTATGAAT+TGG	+	Chr5:76177969-76177988	MsG0580028175.01.T01:CDS	25.0%
!	GATTGATGAAAATGTGATTA+GGG	+	Chr5:76177924-76177943	MsG0580028175.01.T01:CDS	25.0%
!	TGATTGATGAAAATGTGATT+AGG	+	Chr5:76177923-76177942	MsG0580028175.01.T01:CDS	25.0%
!	TTGTTAGAATGGTTGAATTA+GGG	+	Chr5:76178106-76178125	MsG0580028175.01.T01:CDS	25.0%
!	TTTCAAATAGATTCCAAAAC+AGG	+	Chr5:76177814-76177833	MsG0580028175.01.T01:CDS	25.0%
!	TTTGTTAGAATGGTTGAATT+AGG	+	Chr5:76178105-76178124	MsG0580028175.01.T01:CDS	25.0%
!!	AAGAATTTCATTACCTGTTT+TGG	-	Chr5:76177830-76177849	None:intergenic	25.0%
!!!	GGAGTTTGTTTTGAATAAAA+TGG	+	Chr5:76178305-76178324	MsG0580028175.01.T01:CDS	25.0%
!!!	TGTTTTGAATAAAATGGATG+TGG	+	Chr5:76178311-76178330	MsG0580028175.01.T01:CDS	25.0%
!!!	TTTTGGTAGTTTGAATGAAA+TGG	+	Chr5:76177864-76177883	MsG0580028175.01.T01:CDS	25.0%
	AAATGGAAAATGCTTATGGA+AGG	+	Chr5:76177881-76177900	MsG0580028175.01.T01:CDS	30.0%
	ATATTAAACGTCGTAACATC+AGG	-	Chr5:76178138-76178157	None:intergenic	30.0%
	TGAACATATGAGAATTGAGA+AGG	+	Chr5:76178212-76178231	MsG0580028175.01.T01:CDS	30.0%
!	CTTCTGTGTTATAGTGTTTT+TGG	+	Chr5:76177847-76177866	MsG0580028175.01.T01:CDS	30.0%
!!	TTTGTTAGAGATGTTGGTTT+AGG	+	Chr5:76177997-76178016	MsG0580028175.01.T01:CDS	30.0%
	ACATATGAGAATTGAGAAGG+TGG	+	Chr5:76178215-76178234	MsG0580028175.01.T01:CDS	35.0%
	ATGGAAGGTTTAAGAGATCT+AGG	+	Chr5:76177896-76177915	MsG0580028175.01.T01:CDS	35.0%
	CAACCATAAGTAACCAAATC+AGG	-	Chr5:76178243-76178262	None:intergenic	35.0%
	GTTTAGGTAGGAGAAATGTA+GGG	+	Chr5:76178013-76178032	MsG0580028175.01.T01:CDS	35.0%
	TGAAAATGTGATTAGGGCTA+TGG	+	Chr5:76177930-76177949	MsG0580028175.01.T01:CDS	35.0%
!	GAAATGTAGGGAATCTTTTG+TGG	+	Chr5:76178025-76178044	MsG0580028175.01.T01:CDS	35.0%
!!	GTTCCTGATTTGGTTACTTA+TGG	+	Chr5:76178237-76178256	MsG0580028175.01.T01:CDS	35.0%
!!	TTAGAGATGTTGGTTTAGGT+AGG	+	Chr5:76178001-76178020	MsG0580028175.01.T01:CDS	35.0%
	GACGTTTAATATTCGCGCTT+TGG	+	Chr5:76178146-76178165	MsG0580028175.01.T01:CDS	40.0%
	GATTTGTCCACAGTTGTTGA+CGG	+	Chr5:76178336-76178355	MsG0580028175.01.T01:CDS	40.0%
	GGTTACTTATGGTTGTGTTG+TGG	+	Chr5:76178248-76178267	MsG0580028175.01.T01:CDS	40.0%
	GGTTTAGGTAGGAGAAATGT+AGG	+	Chr5:76178012-76178031	MsG0580028175.01.T01:CDS	40.0%
	TAGAAGGCTTGGAAGGAATT+TGG	+	Chr5:76178284-76178303	MsG0580028175.01.T01:CDS	40.0%
	TGGATGCTTACTTGGATAGA+AGG	+	Chr5:76178268-76178287	MsG0580028175.01.T01:CDS	40.0%
	TTGTGTTGTGGATGCTTACT+TGG	+	Chr5:76178260-76178279	MsG0580028175.01.T01:CDS	40.0%
!!	GCAGAGAGAGTTTGTTAGAA+TGG	+	Chr5:76178095-76178114	MsG0580028175.01.T01:CDS	40.0%
!!	GGTCAGTTTGTTAGAGATGT+TGG	+	Chr5:76177991-76178010	MsG0580028175.01.T01:CDS	40.0%
	ACTTGGATAGAAGGCTTGGA+AGG	+	Chr5:76178277-76178296	MsG0580028175.01.T01:CDS	45.0%
	GCTTACTTGGATAGAAGGCT+TGG	+	Chr5:76178273-76178292	MsG0580028175.01.T01:CDS	45.0%
	TGAGAAGGTGGTTCCTGATT+TGG	+	Chr5:76178227-76178246	MsG0580028175.01.T01:CDS	45.0%
!	TTTCGAGAATGGCGCTGTTT+TGG	+	Chr5:76178172-76178191	MsG0580028175.01.T01:CDS	45.0%
!!	TTCGAGAATGGCGCTGTTTT+GGG	+	Chr5:76178173-76178192	MsG0580028175.01.T01:CDS	45.0%
	AACGGATCCGTCAACAACTG+TGG	-	Chr5:76178346-76178365	None:intergenic	50.0%
!!	CGCTTTGGCGTTTTCGAGAA+TGG	+	Chr5:76178161-76178180	MsG0580028175.01.T01:CDS	50.0%

Chromosome	Type	Strat	End	Strand	Name
Chr5	gene	76177778	76178374	76177778	ID=MsG0580028175.01;Name=MsG0580028175.01
Chr5	mRNA	76177778	76178374	76177778	ID=MsG0580028175.01.T01;Parent=MsG0580028175.01;Name=MsG0580028175.01.T01;_AED=0.36;_eAED=0.36;_QI=0\|-1\|0\|1\|-1\|1\|1\|0\|198
Chr5	exon	76177778	76178374	76177778	ID=MsG0580028175.01.T01:exon:9780;Parent=MsG0580028175.01.T01
Chr5	CDS	76177778	76178374	76177778	ID=MsG0580028175.01.T01:cds;Parent=MsG0580028175.01.T01

Gene Sequence

>MsG0580028175.01.T01

ATGGAAGAAACAATCAATGAAATGATTTCAAAGGGTTTTCAAATAGATTCCAAAACAGGTAATGAAATTCTTCTGTGTTATAGTGTTTTTGGTAGTTTGAATGAAATGGAAAATGCTTATGGAAGGTTTAAGAGATCTAGGTTTTTGATTGATGAAAATGTGATTAGGGCTATGGCTTATGCTTATATAAAGAAGAGAAAATTCTATGAATTGGGTCAGTTTGTTAGAGATGTTGGTTTAGGTAGGAGAAATGTAGGGAATCTTTTGTGGAATCTCTTATTGCTTTCTTATGCTGCTAATTTTAAGATGAAGAGTTTGCAGAGAGAGTTTGTTAGAATGGTTGAATTAGGGTTTCGTCCTGATGTTACGACGTTTAATATTCGCGCTTTGGCGTTTTCGAGAATGGCGCTGTTTTGGGATCTTCATCTTAGTATTGAACATATGAGAATTGAGAAGGTGGTTCCTGATTTGGTTACTTATGGTTGTGTTGTGGATGCTTACTTGGATAGAAGGCTTGGAAGGAATTTGGAGTTTGTTTTGAATAAAATGGATGTGGATGATTTGTCCACAGTTGTTGACGGATCCGTTTGTGTTTGA

Protein sequence

>MsG0580028175.01.T01

MEETINEMISKGFQIDSKTGNEILLCYSVFGSLNEMENAYGRFKRSRFLIDENVIRAMAYAYIKKRKFYELGQFVRDVGLGRRNVGNLLWNLLLLSYAANFKMKSLQREFVRMVELGFRPDVTTFNIRALAFSRMALFWDLHLSIEHMRIEKVVPDLVTYGCVVDAYLDRRLGRNLEFVLNKMDVDDLSTVVDGSVCV*