AlfalfaGEDB | MsG0280007021.01

M. sativa cultivar ZhongmuNo.1 / MsG0280007021.01

KEGG: -
GO: -
PFAM: -

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007021.01.T01	XP_003593907.1	89.041	219	21	1	21	236	93	311	2.71E-138	400

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007021.01.T01	G7IP73	89.041	219	21	1	21	236	93	311	1.29e-138	400

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
MsG0080048059.01	MsG0280007021.01	0.802615	5.157034e-49	2.537618e-46
MsG0080048978.01	MsG0280007021.01	0.806945	6.427212e-50	3.534275e-47
MsG0080049019.01	MsG0280007021.01	0.819262	1.274009e-52	9.755712e-50
MsG0080049062.01	MsG0280007021.01	0.808091	3.672777e-50	2.080922e-47
MsG0080049133.01	MsG0280007021.01	0.822559	2.220412e-53	1.865039e-50
MsG0180000322.01	MsG0280007021.01	0.839264	1.757856e-57	2.414508e-54
MsG0180000337.01	MsG0280007021.01	-0.809399	1.929351e-50	1.131622e-47
MsG0180000467.01	MsG0280007021.01	0.830333	3.115545e-55	3.272599e-52
MsG0180001113.01	MsG0280007021.01	0.801263	9.779653e-49	4.649818e-46
MsG0180002099.01	MsG0280007021.01	0.826696	2.354158e-54	2.224033e-51
MsG0180002809.01	MsG0280007021.01	0.828891	6.984778e-55	7.034044e-52
MsG0180003114.01	MsG0280007021.01	0.824582	7.467271e-54	6.642116e-51
MsG0180003757.01	MsG0280007021.01	0.807026	6.179744e-50	3.405336e-47
MsG0180003880.01	MsG0280007021.01	0.800028	1.746155e-48	8.046376e-46
MsG0180003980.01	MsG0280007021.01	0.809530	1.808214e-50	1.064254e-47
MsG0180003985.01	MsG0280007021.01	0.806464	8.121490e-50	4.411175e-47
MsG0180004458.01	MsG0280007021.01	0.808064	3.721375e-50	2.106892e-47
MsG0180004502.01	MsG0280007021.01	0.817922	2.565233e-52	1.893128e-49
MsG0180004553.01	MsG0280007021.01	0.810589	1.069253e-50	6.471289e-48
MsG0180004581.01	MsG0280007021.01	0.801520	8.663608e-49	4.145951e-46
MsG0180004747.01	MsG0280007021.01	0.810986	8.775031e-51	5.368097e-48
MsG0180004761.01	MsG0280007021.01	0.813282	2.770133e-51	1.801290e-48
MsG0180005431.01	MsG0280007021.01	0.812918	3.329235e-51	2.143623e-48
MsG0180006212.01	MsG0280007021.01	0.813867	2.059040e-51	1.360372e-48
MsG0280006381.01	MsG0280007021.01	0.818915	1.527471e-52	1.158640e-49
MsG0280006452.01	MsG0280007021.01	0.806438	8.226469e-50	4.465070e-47
MsG0280006973.01	MsG0280007021.01	0.824136	9.506108e-54	8.347818e-51
MsG0280007021.01	MsG0280007022.01	0.952105	4.947371e-110	1.185534e-104
MsG0280007021.01	MsG0280007136.01	0.822551	2.229412e-53	1.872184e-50
MsG0280007021.01	MsG0280007247.01	0.814437	1.541677e-51	1.034435e-48
MsG0280007021.01	MsG0280007288.01	0.802799	4.725551e-49	2.336283e-46
MsG0280007021.01	MsG0280007291.01	0.803086	4.122034e-49	2.052683e-46
MsG0280007021.01	MsG0280007649.01	0.815200	1.044298e-51	7.152607e-49
MsG0280007021.01	MsG0280007650.01	0.816884	4.393439e-52	3.151327e-49
MsG0280007021.01	MsG0280008430.01	0.808383	3.181907e-50	1.816793e-47
MsG0280007021.01	MsG0280010149.01	0.811418	7.071328e-51	4.374931e-48
MsG0280007021.01	MsG0280011276.01	0.811174	7.988891e-51	4.910786e-48
MsG0280007021.01	MsG0380012281.01	0.802438	5.610610e-49	2.748379e-46
MsG0280007021.01	MsG0380013506.01	0.809176	2.153618e-50	1.255657e-47
MsG0280007021.01	MsG0380015348.01	0.804663	1.938660e-49	1.005407e-46
MsG0280007021.01	MsG0380015439.01	0.803986	2.683151e-49	1.367515e-46
MsG0280007021.01	MsG0380015654.01	0.802817	4.686099e-49	2.317879e-46
MsG0280007021.01	MsG0380015719.01	0.803381	3.582270e-49	1.797465e-46
MsG0280007021.01	MsG0380015752.01	0.806540	7.828786e-50	4.260329e-47
MsG0280007021.01	MsG0380015971.01	0.802424	5.647609e-49	2.765602e-46
MsG0280007021.01	MsG0380016229.01	0.811624	6.377841e-51	3.967217e-48
MsG0280007021.01	MsG0380016241.01	0.805403	1.357907e-49	7.177542e-47
MsG0280007021.01	MsG0380016478.01	0.833827	4.263932e-56	4.968485e-53
MsG0280007021.01	MsG0380016790.01	0.818667	1.739079e-52	1.309973e-49
MsG0280007021.01	MsG0380016835.01	0.806496	7.998764e-50	4.347873e-47
MsG0280007021.01	MsG0380016889.01	0.811149	8.086617e-51	4.967659e-48
MsG0280007021.01	MsG0380016934.01	0.802346	5.860701e-49	2.864225e-46
MsG0280007021.01	MsG0380016960.01	0.815659	8.254354e-52	5.725742e-49
MsG0280007021.01	MsG0380017317.01	0.802086	6.627374e-49	3.217472e-46
MsG0280007021.01	MsG0380017405.01	0.813270	2.786056e-51	1.811039e-48
MsG0280007021.01	MsG0380017406.01	0.817118	3.892125e-52	2.809641e-49
MsG0280007021.01	MsG0380017895.01	0.813108	3.024465e-51	1.957272e-48
MsG0280007021.01	MsG0380017928.01	0.805594	1.238000e-49	6.575898e-47
MsG0280007021.01	MsG0480018190.01	0.804238	2.378170e-49	1.219829e-46
MsG0280007021.01	MsG0480018201.01	0.810865	9.320268e-51	5.682714e-48
MsG0280007021.01	MsG0480018202.01	0.803005	4.285869e-49	2.129798e-46
MsG0280007021.01	MsG0480018203.01	0.808051	3.744420e-50	2.119214e-47
MsG0280007021.01	MsG0480019836.01	0.819733	9.947918e-53	7.718477e-50
MsG0280007021.01	MsG0480019838.01	0.809010	2.337636e-50	1.356838e-47
MsG0280007021.01	MsG0480021039.01	0.806618	7.537275e-50	4.109707e-47
MsG0280007021.01	MsG0480021143.01	0.811938	5.451349e-51	3.419255e-48
MsG0280007021.01	MsG0480021169.01	0.804183	2.440695e-49	1.250194e-46
MsG0280007021.01	MsG0480021205.01	0.807127	5.883612e-50	3.250503e-47
MsG0280007021.01	MsG0480022626.01	0.818151	2.276574e-52	1.690645e-49
MsG0280007021.01	MsG0480022655.01	-0.800335	1.512686e-48	7.025213e-46
MsG0280007021.01	MsG0480022687.01	0.822389	2.431881e-53	2.032787e-50
MsG0280007021.01	MsG0480023217.01	0.819275	1.265163e-52	9.691349e-50
MsG0280007021.01	MsG0480023319.01	0.814079	1.849228e-51	1.228792e-48
MsG0280007021.01	MsG0480023469.01	0.810821	9.526057e-51	5.801329e-48
MsG0280007021.01	MsG0480023481.01	0.830740	2.476625e-55	2.632647e-52
MsG0280007021.01	MsG0480023482.01	0.845900	3.042347e-59	5.146809e-56
MsG0280007021.01	MsG0480023483.01	0.808167	3.537612e-50	2.008436e-47
MsG0280007021.01	MsG0480023695.01	0.833016	6.792637e-56	7.724796e-53
MsG0280007021.01	MsG0480023818.01	0.839777	1.293515e-57	1.804944e-54
MsG0280007021.01	MsG0480023850.01	0.801853	7.399850e-49	3.571320e-46
MsG0280007021.01	MsG0580024278.01	0.828078	1.097989e-54	1.080006e-51
MsG0280007021.01	MsG0580025105.01	0.806137	9.519922e-50	5.127658e-47
MsG0280007021.01	MsG0580025315.01	0.833276	5.854338e-56	6.709136e-53
MsG0280007021.01	MsG0580025392.01	0.815588	8.561378e-52	5.926951e-49
MsG0280007021.01	MsG0580025447.01	0.805838	1.100051e-49	5.880158e-47
MsG0280007021.01	MsG0580027325.01	0.845257	4.546577e-59	7.533055e-56
MsG0280007021.01	MsG0580030237.01	0.811492	6.815493e-51	4.224931e-48
MsG0280007021.01	MsG0680030875.01	0.810337	1.211914e-50	7.285528e-48
MsG0280007021.01	MsG0680032197.01	0.807498	4.907878e-50	2.737977e-47
MsG0280007021.01	MsG0680035368.01	0.811989	5.312416e-51	3.336875e-48
MsG0280007021.01	MsG0780035994.01	0.814962	1.179422e-51	8.026334e-49
MsG0280007021.01	MsG0780036067.01	0.800936	1.140710e-48	5.379148e-46
MsG0280007021.01	MsG0780036909.01	0.803040	4.213600e-49	2.095881e-46
MsG0280007021.01	MsG0780037698.01	0.806314	8.735407e-50	4.726347e-47
MsG0280007021.01	MsG0780037734.01	0.819299	1.249010e-52	9.573662e-50
MsG0280007021.01	MsG0780038047.01	0.808714	2.703607e-50	1.556945e-47
MsG0280007021.01	MsG0780039838.01	0.803765	2.981516e-49	1.510946e-46
MsG0280007021.01	MsG0780039839.01	0.808866	2.509004e-50	1.450746e-47
MsG0280007021.01	MsG0780039860.01	0.812378	4.370478e-51	2.774332e-48
MsG0280007021.01	MsG0780039879.01	0.817442	3.291238e-52	2.397156e-49
MsG0280007021.01	MsG0780040121.01	0.809157	2.173786e-50	1.266785e-47
MsG0280007021.01	MsG0780040159.01	0.811000	8.711583e-51	5.331279e-48
MsG0280007021.01	MsG0780040283.01	0.805163	1.524031e-49	8.006154e-47
MsG0280007021.01	MsG0780040685.01	0.805143	1.538904e-49	8.080271e-47
MsG0280007021.01	MsG0780041173.01	0.811348	7.321436e-51	4.521020e-48
MsG0280007021.01	MsG0780041254.01	0.812183	4.819089e-51	3.043088e-48
MsG0280007021.01	MsG0780041478.01	0.813006	3.184953e-51	2.055618e-48
MsG0280007021.01	MsG0780041620.01	0.812194	4.793858e-51	3.028093e-48
MsG0280007021.01	MsG0780041691.01	0.815982	6.992836e-52	4.893565e-49
MsG0280007021.01	MsG0780041783.01	0.811637	6.338821e-51	3.944072e-48
MsG0280007021.01	MsG0780041809.01	0.816658	4.935953e-52	3.518754e-49
MsG0280007021.01	MsG0880041835.01	0.815294	9.950235e-52	6.833096e-49
MsG0280007021.01	MsG0880041855.01	0.810779	9.726599e-51	5.916790e-48
MsG0280007021.01	MsG0880042043.01	0.816080	6.648914e-52	4.665645e-49
MsG0280007021.01	MsG0880044339.01	0.836855	7.326597e-57	9.349443e-54
MsG0280007021.01	MsG0880044387.01	0.800288	1.546279e-48	7.172697e-46
MsG0280007021.01	MsG0880045374.01	0.809415	1.913608e-50	1.122895e-47
MsG0280007021.01	MsG0880045457.01	0.823349	1.453390e-53	1.248163e-50
MsG0280007021.01	MsG0880045778.01	0.801867	7.351529e-49	3.549307e-46
MsG0280007021.01	MsG0880046105.01	0.808328	3.268530e-50	1.863600e-47
MsG0280007021.01	MsG0880046151.01	0.800468	1.421057e-48	6.621645e-46
MsG0280007021.01	MsG0880046167.01	0.809882	1.518598e-50	9.021614e-48
MsG0280007021.01	MsG0880046219.01	0.818529	1.869581e-52	1.402993e-49
MsG0280007021.01	MsG0880046469.01	0.800263	1.564640e-48	7.253077e-46
MsG0280007021.01	MsG0880046584.01	0.809574	1.769223e-50	1.042556e-47
MsG0280007021.01	MsG0880046639.01	0.817231	3.670282e-52	2.657712e-49
MsG0280007021.01	MsG0880046876.01	0.808385	3.178937e-50	1.815193e-47
MsG0280007021.01	MsG0880047318.01	0.808679	2.751373e-50	1.583038e-47
MsG0280007021.01	MsG0880047627.01	0.813963	1.961392e-51	1.299211e-48
MsG0280007021.01	MsG0880047628.01	0.800850	1.187793e-48	5.588948e-46
MsG0280007021.01	MsG0880047661.01	0.806671	7.345920e-50	4.010758e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007021.01.T01	MTR_2g019220	89.041	219	21	1	21	236	93	311	3.28e-142	400

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MsG0280007021.01.T01	AT1G30130	55.947	227	85	3	22	236	88	311	3.94e-84	253
MsG0280007021.01.T01	AT1G30130	55.947	227	85	3	22	236	88	311	3.94e-84	253
MsG0280007021.01.T01	AT1G30130	55.947	227	85	3	22	236	88	311	3.94e-84	253

Find 0 sgRNAs with CRISPR-Local

Find 194 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AAAAATGACAATTAATAAAA+GGG	-	Chr2:9523096-9523115	MsG0280007021.01.T01:intron	10.0%
!!	AAATACTTAATCATTTAAAA+TGG	+	Chr2:9523573-9523592	None:intergenic	10.0%
!!	TAAAAATGACAATTAATAAA+AGG	-	Chr2:9523095-9523114	MsG0280007021.01.T01:intron	10.0%
!!	ATTATATGTGTAAATTGAAA+AGG	+	Chr2:9522010-9522029	None:intergenic	15.0%
!!	CATATAAAACATTGTTTATA+TGG	-	Chr2:9524005-9524024	MsG0280007021.01.T01:intron	15.0%
!!	TATAATTTACATACCATAAA+AGG	+	Chr2:9522830-9522849	None:intergenic	15.0%
!!!	GTATTTTGATAAAGAAATAT+AGG	-	Chr2:9522118-9522137	MsG0280007021.01.T01:intron	15.0%
!!!	TTAATTTAAGTTAACTATGT+AGG	+	Chr2:9523073-9523092	None:intergenic	15.0%
!!!	TTAGTTATTTTGAAAATTGA+GGG	+	Chr2:9523819-9523838	None:intergenic	15.0%
!!!	TTTGACTTAAAATTCATTTT+TGG	-	Chr2:9523746-9523765	MsG0280007021.01.T01:intron	15.0%
!!	AAAACTATAAGAAAACTGTT+AGG	+	Chr2:9522476-9522495	None:intergenic	20.0%
!!	TGAGAAGATTAATTAATTAG+TGG	-	Chr2:9522096-9522115	MsG0280007021.01.T01:intron	20.0%
!!	TTACGTTTCAATTTAAATGT+AGG	-	Chr2:9521786-9521805	MsG0280007021.01.T01:CDS	20.0%
!!	TTCTATCATAAACCATATTT+GGG	-	Chr2:9522424-9522443	MsG0280007021.01.T01:intron	20.0%
!!	TTTCAATTCAAATGCAAAAA+TGG	+	Chr2:9524231-9524250	None:intergenic	20.0%
!!!	AGTTTTCTTATAGTTTTTCT+AGG	-	Chr2:9522479-9522498	MsG0280007021.01.T01:intron	20.0%
!!!	ATTCTTTACTTTTTCTCAAT+TGG	-	Chr2:9521733-9521752	MsG0280007021.01.T01:CDS	20.0%
!!!	CAGAAAAGCTATTTTTATTA+AGG	+	Chr2:9523300-9523319	None:intergenic	20.0%
!!!	GCTTTTGAATAAATATTTGT+TGG	+	Chr2:9523187-9523206	None:intergenic	20.0%
!!!	GTTAGTTATTTTGAAAATTG+AGG	+	Chr2:9523820-9523839	None:intergenic	20.0%
!!!	TAAATTTTTTGCTTGAGATT+GGG	-	Chr2:9523691-9523710	MsG0280007021.01.T01:intron	20.0%
!!!	TATTTTTAAATCCACGATTT+TGG	-	Chr2:9523792-9523811	MsG0280007021.01.T01:intron	20.0%
!!!	TTCTTTACTTTTTCTCAATT+GGG	-	Chr2:9521734-9521753	MsG0280007021.01.T01:CDS	20.0%
!	AAAATAAAGGCAGTAAAGTT+GGG	+	Chr2:9524261-9524280	None:intergenic	25.0%
!	AATGAAGAAAACACTTACAT+GGG	+	Chr2:9521716-9521735	None:intergenic	25.0%
!	AATTCAGGGATCTAAAAATA+TGG	-	Chr2:9524148-9524167	MsG0280007021.01.T01:intron	25.0%
!	AGAAGAATAAACTGACAAAA+TGG	+	Chr2:9522530-9522549	None:intergenic	25.0%
!	AGCAAAAAATTTACTTCTCA+TGG	+	Chr2:9523684-9523703	None:intergenic	25.0%
!	ATTCAGGGATCTAAAAATAT+GGG	-	Chr2:9524149-9524168	MsG0280007021.01.T01:intron	25.0%
!	CAACATGTCCATTAAAATAA+AGG	+	Chr2:9524274-9524293	None:intergenic	25.0%
!	GTCAGTTTATTCTTCTTTAT+AGG	-	Chr2:9522534-9522553	MsG0280007021.01.T01:intron	25.0%
!	GTTCTATCATAAACCATATT+TGG	-	Chr2:9522423-9522442	MsG0280007021.01.T01:intron	25.0%
!	TAAAATAAAGGCAGTAAAGT+TGG	+	Chr2:9524262-9524281	None:intergenic	25.0%
!	TAAAATAGTTTCCAAACTCA+GGG	+	Chr2:9523441-9523460	None:intergenic	25.0%
!	TCTGTGACATAATACTATTT+AGG	-	Chr2:9523912-9523931	MsG0280007021.01.T01:intron	25.0%
!	TTGTTAGGTTATCATGTTAT+AGG	+	Chr2:9522337-9522356	None:intergenic	25.0%
!!	AGCAATTTAAAATCTCACTT+CGG	-	Chr2:9523637-9523656	MsG0280007021.01.T01:intron	25.0%
!!	ATTCAGATACTTGATAATTC+AGG	-	Chr2:9522624-9522643	MsG0280007021.01.T01:intron	25.0%
!!	CGTAAAAATCAAATTTTGCA+TGG	+	Chr2:9521771-9521790	None:intergenic	25.0%
!!	TATTTTGTCTCATACGATTT+TGG	+	Chr2:9524176-9524195	None:intergenic	25.0%
!!	TTGTCATGATGAATTTTCAT+TGG	-	Chr2:9523612-9523631	MsG0280007021.01.T01:intron	25.0%
!!!	ATAGCTTTTCTGCATTTTTT+CGG	-	Chr2:9523308-9523327	MsG0280007021.01.T01:intron	25.0%
!!!	CGATGTTTTTTTTTTGTTTC+AGG	-	Chr2:9522721-9522740	MsG0280007021.01.T01:CDS	25.0%
!!!	CTTTACTGCCTTTATTTTAA+TGG	-	Chr2:9524263-9524282	MsG0280007021.01.T01:CDS	25.0%
!!!	GTAAATTTTTTGCTTGAGAT+TGG	-	Chr2:9523690-9523709	MsG0280007021.01.T01:intron	25.0%
!!!	TATTTTTAGATCCCTGAATT+TGG	+	Chr2:9524148-9524167	None:intergenic	25.0%
!!!	TCAATTGATTTTGTTTGACA+AGG	-	Chr2:9524329-9524348	MsG0280007021.01.T01:CDS	25.0%
!!!	TGGTTTTTTCACTTTTATGT+GGG	-	Chr2:9522588-9522607	MsG0280007021.01.T01:intron	25.0%
	AAAATCAACCCAAATGCATA+TGG	-	Chr2:9524096-9524115	MsG0280007021.01.T01:intron	30.0%
	AAATCAACCCAAATGCATAT+GGG	-	Chr2:9524097-9524116	MsG0280007021.01.T01:intron	30.0%
	AATTGAAAACATGTCCAAAG+AGG	+	Chr2:9524315-9524334	None:intergenic	30.0%
	ACTTCTCATGGAAGAAATAA+TGG	+	Chr2:9523672-9523691	None:intergenic	30.0%
	ATGGAGAAAATTCAATTGGT+AGG	-	Chr2:9522251-9522270	MsG0280007021.01.T01:intron	30.0%
	ATGTAGCTATCTCATTTAGT+AGG	+	Chr2:9522383-9522402	None:intergenic	30.0%
	CAATGAAAAGTTACTACTCT+TGG	+	Chr2:9523160-9523179	None:intergenic	30.0%
	CTTCTTTATAGGATTTCTCT+TGG	-	Chr2:9522545-9522564	MsG0280007021.01.T01:intron	30.0%
	GAAGAGGAAAACACAATATA+TGG	+	Chr2:9522960-9522979	None:intergenic	30.0%
	GAATGAAGAAAACACTTACA+TGG	+	Chr2:9521717-9521736	None:intergenic	30.0%
	GCATAATATGATTCAAACTG+AGG	-	Chr2:9522991-9523010	MsG0280007021.01.T01:intron	30.0%
	GCATATGGAGAAAATTCAAT+TGG	-	Chr2:9522247-9522266	MsG0280007021.01.T01:intron	30.0%
	GTAAAATAGTTTCCAAACTC+AGG	+	Chr2:9523442-9523461	None:intergenic	30.0%
	TAACAAAGAATTTGTCTGAG+TGG	-	Chr2:9522163-9522182	MsG0280007021.01.T01:intron	30.0%
	TACTAAATGAGATAGCTACA+TGG	-	Chr2:9522382-9522401	MsG0280007021.01.T01:intron	30.0%
	TAGCAATAATACACACTCAA+TGG	+	Chr2:9521902-9521921	None:intergenic	30.0%
	TCCTAAAATCTGCATAGAAA+TGG	+	Chr2:9522853-9522872	None:intergenic	30.0%
	TGGAGAAAATTCAATTGGTA+GGG	-	Chr2:9522252-9522271	MsG0280007021.01.T01:intron	30.0%
	TTTGTCGCTAAACATAGTAA+GGG	-	Chr2:9522061-9522080	MsG0280007021.01.T01:intron	30.0%
!	ACCATTTCTATGCAGATTTT+AGG	-	Chr2:9522849-9522868	MsG0280007021.01.T01:intron	30.0%
!	AGAATGCGGATTGAAAATAA+AGG	+	Chr2:9522777-9522796	None:intergenic	30.0%
!	ATTGTGTTTTCCTCTTCTTT+TGG	-	Chr2:9522963-9522982	MsG0280007021.01.T01:intron	30.0%
!	CAATTTAAAATCTCACTTCG+GGG	-	Chr2:9523639-9523658	MsG0280007021.01.T01:intron	30.0%
!	GCAATTTAAAATCTCACTTC+GGG	-	Chr2:9523638-9523657	MsG0280007021.01.T01:intron	30.0%
!!!	CATTTTTGGTTCCTCTATTT+TGG	-	Chr2:9523760-9523779	MsG0280007021.01.T01:intron	30.0%
!!!	GTGGTTTTTTCACTTTTATG+TGG	-	Chr2:9522587-9522606	MsG0280007021.01.T01:intron	30.0%
!!!	TGGGTTGATTTTTGATGATT+TGG	+	Chr2:9524088-9524107	None:intergenic	30.0%
!!!	TGGTTGTTTTTGTTGTTGTT+AGG	+	Chr2:9522352-9522371	None:intergenic	30.0%
	AAAACCGAATGACCAAATTC+AGG	-	Chr2:9524133-9524152	MsG0280007021.01.T01:intron	35.0%
	AAACCGAATGACCAAATTCA+GGG	-	Chr2:9524134-9524153	MsG0280007021.01.T01:intron	35.0%
	AACTATGACAGGATATGCTT+GGG	-	Chr2:9523353-9523372	MsG0280007021.01.T01:intron	35.0%
	AATATCAAAGCAAGTGATCC+TGG	-	Chr2:9523382-9523401	MsG0280007021.01.T01:CDS	35.0%
	AGCTATCTCATTTAGTAGGA+TGG	+	Chr2:9522379-9522398	None:intergenic	35.0%
	AGCTTCAAAATGTGTAACTG+GGG	+	Chr2:9523847-9523866	None:intergenic	35.0%
	CAACACATACATATCATGGT+TGG	-	Chr2:9523033-9523052	MsG0280007021.01.T01:intron	35.0%
	CAACCAACACATACATATCA+TGG	-	Chr2:9523029-9523048	MsG0280007021.01.T01:intron	35.0%
	CAACCATGATATGTATGTGT+TGG	+	Chr2:9523035-9523054	None:intergenic	35.0%
	CAGCTTCAAAATGTGTAACT+GGG	+	Chr2:9523848-9523867	None:intergenic	35.0%
	CTTCATCTGGAAAGATGATT+GGG	+	Chr2:9521667-9521686	None:intergenic	35.0%
	CTTTGTCGCTAAACATAGTA+AGG	-	Chr2:9522060-9522079	MsG0280007021.01.T01:intron	35.0%
	GAAATACCAGAACAACACTT+TGG	-	Chr2:9523713-9523732	MsG0280007021.01.T01:intron	35.0%
	GAGAAAATTCAATTGGTAGG+GGG	-	Chr2:9522254-9522273	MsG0280007021.01.T01:intron	35.0%
	GGAGAAAATTCAATTGGTAG+GGG	-	Chr2:9522253-9522272	MsG0280007021.01.T01:intron	35.0%
	GTGCAATATTGCACATGTTA+AGG	-	Chr2:9523131-9523150	MsG0280007021.01.T01:intron	35.0%
	TACAACAACCACCAAAATAG+AGG	+	Chr2:9523774-9523793	None:intergenic	35.0%
	TAGAGACGTATTGTGAAAAC+TGG	-	Chr2:9522695-9522714	MsG0280007021.01.T01:CDS	35.0%
	TATGCAATGACCAAAAGAAG+AGG	+	Chr2:9522976-9522995	None:intergenic	35.0%
	TCAGCTTCAAAATGTGTAAC+TGG	+	Chr2:9523849-9523868	None:intergenic	35.0%
	TCAGGTAACAAATACACCAT+GGG	-	Chr2:9522739-9522758	MsG0280007021.01.T01:CDS	35.0%
	TCCAGGCTATAAAATTATGG+TGG	-	Chr2:9524378-9524397	MsG0280007021.01.T01:intron	35.0%
	TCCTCCAGGCTATAAAATTA+TGG	-	Chr2:9524375-9524394	MsG0280007021.01.T01:intron	35.0%
	TGGTTGAGTGAAAAACAGTT+TGG	-	Chr2:9522565-9522584	MsG0280007021.01.T01:intron	35.0%
	TTCAGGTAACAAATACACCA+TGG	-	Chr2:9522738-9522757	MsG0280007021.01.T01:CDS	35.0%
	TTCTCCATATGCAATAGTCA+GGG	+	Chr2:9522239-9522258	None:intergenic	35.0%
	TTGAGTGAAAAACAGTTTGG+TGG	-	Chr2:9522568-9522587	MsG0280007021.01.T01:intron	35.0%
	TTTCTCCATATGCAATAGTC+AGG	+	Chr2:9522240-9522259	None:intergenic	35.0%
!	ACCATAATTTTATAGCCTGG+AGG	+	Chr2:9524379-9524398	None:intergenic	35.0%
!	CAATGAGTTGAACCCAAATA+TGG	+	Chr2:9522439-9522458	None:intergenic	35.0%
!	GATATGCTAAGATTTTCTCC+AGG	+	Chr2:9523403-9523422	None:intergenic	35.0%
!	TCCACCATAATTTTATAGCC+TGG	+	Chr2:9524382-9524401	None:intergenic	35.0%
!	TTTAATGGACATGTTGCCTT+TGG	-	Chr2:9524278-9524297	MsG0280007021.01.T01:CDS	35.0%
!	TTTGCATGTCAGTCCTTTTA+TGG	-	Chr2:9522814-9522833	MsG0280007021.01.T01:CDS	35.0%
!!	TCAAATTTTGCATGGTTCTG+AGG	+	Chr2:9521763-9521782	None:intergenic	35.0%
!!!	CAAATTTTGCATGGTTCTGA+GGG	+	Chr2:9521762-9521781	None:intergenic	35.0%
!!!	TTTTGGTTCCTCTATTTTGG+TGG	-	Chr2:9523763-9523782	MsG0280007021.01.T01:intron	35.0%
	AAACACTTACATGGGTCCAT+TGG	+	Chr2:9521708-9521727	None:intergenic	40.0%
	AAATTGAGGGACCAAAATCG+TGG	+	Chr2:9523806-9523825	None:intergenic	40.0%
	AAGAATTTGTCTGAGTGGTG+AGG	-	Chr2:9522168-9522187	MsG0280007021.01.T01:intron	40.0%
	AGAATTTGTCTGAGTGGTGA+GGG	-	Chr2:9522169-9522188	MsG0280007021.01.T01:intron	40.0%
	AGCATATCCTGTCATAGTTC+AGG	+	Chr2:9523352-9523371	None:intergenic	40.0%
	ATCCATACAGCAACCTTATG+AGG	+	Chr2:9523534-9523553	None:intergenic	40.0%
	ATTGACAATTCCAGCTAGTG+TGG	-	Chr2:9521862-9521881	MsG0280007021.01.T01:intron	40.0%
	CTTCGTCAGCTAAATAATCC+TGG	+	Chr2:9524520-9524539	None:intergenic	40.0%
	GAACTATGACAGGATATGCT+TGG	-	Chr2:9523352-9523371	MsG0280007021.01.T01:intron	40.0%
	GATAGAAAACTGCAGTGTTG+TGG	-	Chr2:9524470-9524489	MsG0280007021.01.T01:intron	40.0%
	GATCCCTGAATTTGGTCATT+CGG	+	Chr2:9524140-9524159	None:intergenic	40.0%
	GCTTCATCTGGAAAGATGAT+TGG	+	Chr2:9521668-9521687	None:intergenic	40.0%
	GGAGTCGAACATGTTTATGA+TGG	+	Chr2:9522509-9522528	None:intergenic	40.0%
	TAAGGTTGCTGTATGGATAC+TGG	-	Chr2:9523536-9523555	MsG0280007021.01.T01:intron	40.0%
	TCATTTAGTAGGATGGAGCT+TGG	+	Chr2:9522372-9522391	None:intergenic	40.0%
	TGATCCCTGACTATTGCATA+TGG	-	Chr2:9522232-9522251	MsG0280007021.01.T01:intron	40.0%
	TGGAACAACATCAACCTCTT+TGG	-	Chr2:9524298-9524317	MsG0280007021.01.T01:CDS	40.0%
	TTACATGGGTCCATTGGTAT+CGG	+	Chr2:9521702-9521721	None:intergenic	40.0%
	TTGACAATTCCAGCTAGTGT+GGG	-	Chr2:9521863-9521882	MsG0280007021.01.T01:intron	40.0%
	TTGGCTACTAGATCAGAATG+CGG	+	Chr2:9522791-9522810	None:intergenic	40.0%
!	TCAGATCACGCAGTTTTCTT+TGG	-	Chr2:9523502-9523521	MsG0280007021.01.T01:intron	40.0%
!	TCTTTGGTTGATGCCTCATA+AGG	-	Chr2:9523518-9523537	MsG0280007021.01.T01:intron	40.0%
!	TTTGAAGAAGTGCATTGCTG+AGG	-	Chr2:9521946-9521965	MsG0280007021.01.T01:intron	40.0%
!!	AGAGGTTGATGTTGTTCCAA+AGG	+	Chr2:9524297-9524316	None:intergenic	40.0%
!!	GTCCATTGGTATCGGTAATT+TGG	+	Chr2:9521694-9521713	None:intergenic	40.0%
!!	TACACACCAAAGTGTTGTTC+TGG	+	Chr2:9523722-9523741	None:intergenic	40.0%
!!	TTAGGTGGATTGACGCTAAA+TGG	-	Chr2:9524561-9524580	MsG0280007021.01.T01:CDS	40.0%
	AAGGTTACTCTTTCAGCCCA+TGG	+	Chr2:9522758-9522777	None:intergenic	45.0%
	ACAAAGTTTCGCACACATGG+TGG	+	Chr2:9522313-9522332	None:intergenic	45.0%
	ACGTGGGAATGGCATATCTA+GGG	+	Chr2:9524427-9524446	None:intergenic	45.0%
	AGGACTGACATGCAAAGCTT+TGG	+	Chr2:9522810-9522829	None:intergenic	45.0%
	AGTTGAGCCACTTAAGCAAG+TGG	-	Chr2:9522200-9522219	MsG0280007021.01.T01:intron	45.0%
	ATATGCCATTCCCACGTACA+GGG	-	Chr2:9524430-9524449	MsG0280007021.01.T01:intron	45.0%
	ATTATGTCCATTCGTCCTCC+AGG	-	Chr2:9524361-9524380	MsG0280007021.01.T01:intron	45.0%
	CAAAGTTTCGCACACATGGT+GGG	+	Chr2:9522312-9522331	None:intergenic	45.0%
	CATCTGGAAAGATGATTGGG+TGG	+	Chr2:9521664-9521683	None:intergenic	45.0%
	CGCCAAATTACCGATACCAA+TGG	-	Chr2:9521689-9521708	MsG0280007021.01.T01:CDS	45.0%
	GGAGGACGAATGGACATAAT+GGG	+	Chr2:9524361-9524380	None:intergenic	45.0%
	GTAATTTGGCGAGCTTCATC+TGG	+	Chr2:9521680-9521699	None:intergenic	45.0%
	GTCTGCTCCCATATGCATTT+GGG	+	Chr2:9524107-9524126	None:intergenic	45.0%
	GTTACTTCCTCAGTTTCGCT+CGG	-	Chr2:9522933-9522952	MsG0280007021.01.T01:intron	45.0%
	TACGTGGGAATGGCATATCT+AGG	+	Chr2:9524428-9524447	None:intergenic	45.0%
	TCAGTTCATCACCCTGAGTT+TGG	-	Chr2:9523427-9523446	MsG0280007021.01.T01:CDS	45.0%
	TGATGTCGAGCACAACTTGT+TGG	+	Chr2:9523479-9523498	None:intergenic	45.0%
	TGCCTCATAAGGTTGCTGTA+TGG	-	Chr2:9523529-9523548	MsG0280007021.01.T01:intron	45.0%
	TGGAGGACGAATGGACATAA+TGG	+	Chr2:9524362-9524381	None:intergenic	45.0%
	TGTCTGCTCCCATATGCATT+TGG	+	Chr2:9524108-9524127	None:intergenic	45.0%
	TGTGGATTCAGTCCACAAAG+AGG	-	Chr2:9524488-9524507	MsG0280007021.01.T01:intron	45.0%
	TGTTCATATCCCACACTAGC+TGG	+	Chr2:9521875-9521894	None:intergenic	45.0%
	TTTATAGCCTGGAGGACGAA+TGG	+	Chr2:9524371-9524390	None:intergenic	45.0%
!	CCTGTCATAGTTCAGGTTCA+GGG	+	Chr2:9523345-9523364	None:intergenic	45.0%
!	TCCTGTCATAGTTCAGGTTC+AGG	+	Chr2:9523346-9523365	None:intergenic	45.0%
	AAAGCTTCGTCCCTGTACGT+GGG	+	Chr2:9524443-9524462	None:intergenic	50.0%
	AAGCAAGTCCTAGAGACAGG+TGG	-	Chr2:9524537-9524556	MsG0280007021.01.T01:CDS	50.0%
	ACGAAGCAAGTCCTAGAGAC+AGG	-	Chr2:9524534-9524553	MsG0280007021.01.T01:CDS	50.0%
	AGCCACTTAAGCAAGTGGTC+AGG	-	Chr2:9522205-9522224	MsG0280007021.01.T01:intron	50.0%
	ATATGGACCGAGCGAAACTG+AGG	+	Chr2:9522943-9522962	None:intergenic	50.0%
	CACCTAAACCACCTGTCTCT+AGG	+	Chr2:9524548-9524567	None:intergenic	50.0%
	CCACTTAAGCAAGTGGTCAG+GGG	-	Chr2:9522207-9522226	MsG0280007021.01.T01:intron	50.0%
	CCCTGAACCTGAACTATGAC+AGG	-	Chr2:9523342-9523361	MsG0280007021.01.T01:intron	50.0%
	CTAGAGACAGGTGGTTTAGG+TGG	-	Chr2:9524546-9524565	MsG0280007021.01.T01:CDS	50.0%
	GACAGGATATGCTTGGGAGT+TGG	-	Chr2:9523359-9523378	MsG0280007021.01.T01:intron	50.0%
	GATATGCCATTCCCACGTAC+AGG	-	Chr2:9524429-9524448	MsG0280007021.01.T01:intron	50.0%
	GCCACTTAAGCAAGTGGTCA+GGG	-	Chr2:9522206-9522225	MsG0280007021.01.T01:intron	50.0%
	GGATTGACGCTAAATGGCCA+TGG	-	Chr2:9524567-9524586	MsG0280007021.01.T01:CDS	50.0%
	GGCACAAAGTTTCGCACACA+TGG	+	Chr2:9522316-9522335	None:intergenic	50.0%
	GTCCTAGAGACAGGTGGTTT+AGG	-	Chr2:9524543-9524562	MsG0280007021.01.T01:CDS	50.0%
	TAAAGCTTCGTCCCTGTACG+TGG	+	Chr2:9524444-9524463	None:intergenic	50.0%
	TCCACAAAGAGGAAGCAACC+AGG	-	Chr2:9524499-9524518	MsG0280007021.01.T01:CDS	50.0%
	TCCTGGTTGCTTCCTCTTTG+TGG	+	Chr2:9524503-9524522	None:intergenic	50.0%
	ACGCACCTTGTGTGGTTGGA+AGG	-	Chr2:9522280-9522299	MsG0280007021.01.T01:intron	55.0%
	CCCCTGACCACTTGCTTAAG+TGG	+	Chr2:9522210-9522229	None:intergenic	55.0%
	CGCACCTTGTGTGGTTGGAA+GGG	-	Chr2:9522281-9522300	MsG0280007021.01.T01:intron	55.0%
	GAGAACGCACCTTGTGTGGT+TGG	-	Chr2:9522276-9522295	MsG0280007021.01.T01:intron	55.0%
	GCACCTTGTGTGGTTGGAAG+GGG	-	Chr2:9522282-9522301	MsG0280007021.01.T01:intron	55.0%
	TCTCCCCTTCCAACCACACA+AGG	+	Chr2:9522288-9522307	None:intergenic	55.0%
	TTCGTCCCTGTACGTGGGAA+TGG	+	Chr2:9524438-9524457	None:intergenic	55.0%
	AGATGATTGGGTGGCGCGTG+AGG	+	Chr2:9521655-9521674	None:intergenic	60.0%
	GGGGGAGAACGCACCTTGTG+TGG	-	Chr2:9522272-9522291	MsG0280007021.01.T01:intron	65.0%
	TGGGTGGCGCGTGAGGTGCA+CGG	+	Chr2:9521648-9521667	None:intergenic	70.0%
	GCGCGTGAGGTGCACGGTCG+AGG	+	Chr2:9521642-9521661	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
Chr2	gene	9521617	9524595	9521617	ID=MsG0280007021.01;
Chr2	mRNA	9521617	9524595	9521617	ID=MsG0280007021.01.T01;Parent=MsG0280007021.01
Chr2	CDS	9521617	9521861	9521617	ID=MsG0280007021.01.T01.cds;Parent=MsG0280007021.01.T01
Chr2	CDS	9522689	9522848	9522689	ID=MsG0280007021.01.T01.cds;Parent=MsG0280007021.01.T01
Chr2	CDS	9523377	9523469	9523377	ID=MsG0280007021.01.T01.cds;Parent=MsG0280007021.01.T01
Chr2	CDS	9524245	9524356	9524245	ID=MsG0280007021.01.T01.cds;Parent=MsG0280007021.01.T01
Chr2	CDS	9524495	9524595	9524495	ID=MsG0280007021.01.T01.cds;Parent=MsG0280007021.01.T01

Gene Sequence

>MsG0280007021.01.T01

ATGTTCGCTACGCGCTTATTGACCTCGACCGTGCACCTCACGCGCCACCCAATCATCTTTCCAGATGAAGCTCGCCAAATTACCGATACCAATGGACCCATTTTGCTATTGACAATTCCAGCTAGTGTGGGATATGAACAGAATCCATTGAGTGTGTATTATTGCTATGATGTTGAAGACTCTGATACACGTTTGAAGAAGTGCATTGCTGAGGTAACAAATACACCATGGGCTGAAAGAGTAACCTTTATTTTCAATCCGCATTCTGATCTAGTAGCCAAAGCTTTGCATGTCAGTCCTTTTATGGATATGCTTGGGAGTTGGAATATCAAAGCAAGTGATCCTGGAGAAAATCTTAGCATATCAATTTCAGTTCATCACCCTGAGTTTGGAAACTATTTTACTGCTAGTCTGAGAGCCAACAAGTTGTGCTCGACATCAGCATCAGATCACGCAGTTTTCTTTGGACTGAGCCCATTATGTCCATTCGTCCTCCAGGCTATAAAATTATGGTGGAAGAATGTGAAATTTATACAACACCCTAGATATGCCATTCCCACGTACAGGGACGAAGCTTTAATACGAGATAGAAAACTGCAGTGTTGTGGATTCAGTCCACAAAGAGGAAGCAACCAGGATTATTTAGCTGACGAAGCAAGTCCTAGAGACAGGTGGTTTAGGTGGATTGACGCTAAATGGCCATGGTCGTAG

Protein sequence

>MsG0280007021.01.T01

MFATRLLTSTVHLTRHPIIFPDEARQITDTNGPILLLTIPASVGYEQNPLSVYYCYDVEDSDTRLKKCIAEVTNTPWAERVTFIFNPHSDLVAKALHVSPFMDMLGSWNIKASDPGENLSISISVHHPEFGNYFTASLRANKLCSTSASDHAVFFGLSPLCPFVLQAIKLWWKNVKFIQHPRYAIPTYRDEALIRDRKLQCCGFSPQRGSNQDYLADEASPRDRWFRWIDAKWPWS*