Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007022.01.T01 | XP_004486016.1 | 49.407 | 253 | 29 | 5 | 1 | 169 | 1 | 238 | 3.76E-61 | 202 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007022.01.T01 | A0A1S2XA23 | 49.407 | 253 | 29 | 5 | 1 | 169 | 1 | 238 | 1.80e-61 | 202 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MsG0080048929.01 | MsG0280007022.01 | 0.814730 | 1.327401e-51 | 8.977365e-49 |
| MsG0080048987.01 | MsG0280007022.01 | 0.825993 | 3.460974e-54 | 3.205045e-51 |
| MsG0080049053.01 | MsG0280007022.01 | 0.816047 | 6.762122e-52 | 4.740813e-49 |
| MsG0080049062.01 | MsG0280007022.01 | 0.827066 | 1.921038e-54 | 1.834502e-51 |
| MsG0180000193.01 | MsG0280007022.01 | 0.821550 | 3.803966e-53 | 3.104450e-50 |
| MsG0180000194.01 | MsG0280007022.01 | 0.802132 | 6.486592e-49 | 3.152727e-46 |
| MsG0180000322.01 | MsG0280007022.01 | 0.831373 | 1.732306e-55 | 1.876226e-52 |
| MsG0180000325.01 | MsG0280007022.01 | 0.823266 | 1.519120e-53 | 1.301650e-50 |
| MsG0180000352.01 | MsG0280007022.01 | 0.802018 | 6.844225e-49 | 3.316970e-46 |
| MsG0180000467.01 | MsG0280007022.01 | 0.815489 | 9.006220e-52 | 6.218465e-49 |
| MsG0180000708.01 | MsG0280007022.01 | 0.822854 | 1.896057e-53 | 1.605910e-50 |
| MsG0180001113.01 | MsG0280007022.01 | 0.830903 | 2.259594e-55 | 2.413552e-52 |
| MsG0180001664.01 | MsG0280007022.01 | 0.814828 | 1.262732e-51 | 8.562318e-49 |
| MsG0180001827.01 | MsG0280007022.01 | 0.808632 | 2.815626e-50 | 1.617977e-47 |
| MsG0180002809.01 | MsG0280007022.01 | 0.841293 | 5.187234e-58 | 7.586874e-55 |
| MsG0180002982.01 | MsG0280007022.01 | 0.801967 | 7.013539e-49 | 3.394404e-46 |
| MsG0180003114.01 | MsG0280007022.01 | 0.831810 | 1.351895e-55 | 1.483472e-52 |
| MsG0180003296.01 | MsG0280007022.01 | 0.825680 | 4.108083e-54 | 3.770329e-51 |
| MsG0180003442.01 | MsG0280007022.01 | 0.829188 | 5.920578e-55 | 6.015762e-52 |
| MsG0180003453.01 | MsG0280007022.01 | 0.816688 | 4.860120e-52 | 3.467337e-49 |
| MsG0180003759.01 | MsG0280007022.01 | 0.804370 | 2.232013e-49 | 1.148832e-46 |
| MsG0180003980.01 | MsG0280007022.01 | 0.834368 | 3.121778e-56 | 3.697000e-53 |
| MsG0180003985.01 | MsG0280007022.01 | 0.805842 | 1.098042e-49 | 5.869994e-47 |
| MsG0180003986.01 | MsG0280007022.01 | 0.808668 | 2.765492e-50 | 1.590718e-47 |
| MsG0180004177.01 | MsG0280007022.01 | 0.801978 | 6.976021e-49 | 3.377196e-46 |
| MsG0180004458.01 | MsG0280007022.01 | 0.839198 | 1.829347e-57 | 2.507657e-54 |
| MsG0180004580.01 | MsG0280007022.01 | 0.802190 | 6.310996e-49 | 3.071819e-46 |
| MsG0180004865.01 | MsG0280007022.01 | 0.813908 | 2.017353e-51 | 1.334270e-48 |
| MsG0180005431.01 | MsG0280007022.01 | 0.827607 | 1.425141e-54 | 1.382466e-51 |
| MsG0180005760.01 | MsG0280007022.01 | 0.818431 | 1.967345e-52 | 1.472423e-49 |
| MsG0180006142.01 | MsG0280007022.01 | 0.809479 | 1.853815e-50 | 1.089612e-47 |
| MsG0180006159.01 | MsG0280007022.01 | 0.843241 | 1.581595e-58 | 2.459049e-55 |
| MsG0180006223.01 | MsG0280007022.01 | 0.803569 | 3.274228e-49 | 1.651053e-46 |
| MsG0280006973.01 | MsG0280007022.01 | 0.828509 | 8.644230e-55 | 8.609890e-52 |
| MsG0280007021.01 | MsG0280007022.01 | 0.952105 | 4.947371e-110 | 1.185534e-104 |
| MsG0280007022.01 | MsG0280007079.01 | 0.825309 | 5.028010e-54 | 4.566224e-51 |
| MsG0280007022.01 | MsG0280007136.01 | 0.829831 | 4.130511e-55 | 4.276961e-52 |
| MsG0280007022.01 | MsG0280007247.01 | 0.814682 | 1.360327e-51 | 9.187990e-49 |
| MsG0280007022.01 | MsG0280007800.01 | 0.815602 | 8.500774e-52 | 5.887567e-49 |
| MsG0280007022.01 | MsG0280008430.01 | 0.839607 | 1.431861e-57 | 1.987627e-54 |
| MsG0280007022.01 | MsG0280008935.01 | 0.815556 | 8.702371e-52 | 6.019300e-49 |
| MsG0280007022.01 | MsG0280010016.01 | 0.803492 | 3.397335e-49 | 1.709641e-46 |
| MsG0280007022.01 | MsG0280010149.01 | 0.804333 | 2.271875e-49 | 1.168208e-46 |
| MsG0280007022.01 | MsG0280010356.01 | 0.817654 | 2.947589e-52 | 2.159314e-49 |
| MsG0280007022.01 | MsG0280011276.01 | 0.858298 | 9.067387e-63 | 2.303621e-59 |
| MsG0280007022.01 | MsG0380011896.01 | 0.814215 | 1.725714e-51 | 1.150925e-48 |
| MsG0280007022.01 | MsG0380012065.01 | 0.803392 | 3.562531e-49 | 1.788140e-46 |
| MsG0280007022.01 | MsG0380012625.01 | 0.806181 | 9.318276e-50 | 5.024907e-47 |
| MsG0280007022.01 | MsG0380014795.01 | 0.819872 | 9.244611e-53 | 7.200723e-50 |
| MsG0280007022.01 | MsG0380015081.01 | 0.815995 | 6.947713e-52 | 4.863675e-49 |
| MsG0280007022.01 | MsG0380015103.01 | 0.805505 | 1.292626e-49 | 6.850217e-47 |
| MsG0280007022.01 | MsG0380015719.01 | 0.805053 | 1.606842e-49 | 8.417515e-47 |
| MsG0280007022.01 | MsG0380015974.01 | 0.800961 | 1.127404e-48 | 5.319894e-46 |
| MsG0280007022.01 | MsG0380016354.01 | 0.803976 | 2.696123e-49 | 1.373762e-46 |
| MsG0280007022.01 | MsG0380016399.01 | 0.807857 | 4.117655e-50 | 2.318531e-47 |
| MsG0280007022.01 | MsG0380016478.01 | 0.878618 | 2.426619e-69 | 1.275758e-65 |
| MsG0280007022.01 | MsG0380016530.01 | 0.815684 | 8.151213e-52 | 5.657973e-49 |
| MsG0280007022.01 | MsG0380016623.01 | 0.805622 | 1.221535e-49 | 6.493102e-47 |
| MsG0280007022.01 | MsG0380016699.01 | 0.812405 | 4.310158e-51 | 2.738228e-48 |
| MsG0280007022.01 | MsG0380016896.01 | 0.810493 | 1.121682e-50 | 6.771076e-48 |
| MsG0280007022.01 | MsG0380016960.01 | 0.815856 | 7.460108e-52 | 5.202401e-49 |
| MsG0280007022.01 | MsG0380017100.01 | 0.805676 | 1.189976e-49 | 6.334281e-47 |
| MsG0280007022.01 | MsG0380017309.01 | 0.800610 | 1.329238e-48 | 6.216353e-46 |
| MsG0280007022.01 | MsG0380017472.01 | 0.807071 | 6.044705e-50 | 3.334778e-47 |
| MsG0280007022.01 | MsG0380017474.01 | 0.806362 | 8.533855e-50 | 4.622896e-47 |
| MsG0280007022.01 | MsG0380017647.01 | 0.802629 | 5.123212e-49 | 2.521829e-46 |
| MsG0280007022.01 | MsG0380017976.01 | 0.802419 | 5.659904e-49 | 2.771330e-46 |
| MsG0280007022.01 | MsG0380018066.01 | 0.830859 | 2.316547e-55 | 2.471070e-52 |
| MsG0280007022.01 | MsG0480018100.01 | 0.807124 | 5.890841e-50 | 3.254282e-47 |
| MsG0280007022.01 | MsG0480018108.01 | 0.835234 | 1.889319e-56 | 2.296433e-53 |
| MsG0280007022.01 | MsG0480018190.01 | 0.822296 | 2.556045e-53 | 2.130837e-50 |
| MsG0280007022.01 | MsG0480018323.01 | 0.803227 | 3.854124e-49 | 1.926282e-46 |
| MsG0280007022.01 | MsG0480018329.01 | 0.800489 | 1.406904e-48 | 6.559437e-46 |
| MsG0280007022.01 | MsG0480018844.01 | 0.803134 | 4.029135e-49 | 2.008928e-46 |
| MsG0280007022.01 | MsG0480019485.01 | 0.805104 | 1.568130e-49 | 8.225348e-47 |
| MsG0280007022.01 | MsG0480020122.01 | 0.802258 | 6.110061e-49 | 2.979336e-46 |
| MsG0280007022.01 | MsG0480020498.01 | 0.827587 | 1.441105e-54 | 1.397121e-51 |
| MsG0280007022.01 | MsG0480021039.01 | 0.819637 | 1.046141e-52 | 8.094978e-50 |
| MsG0280007022.01 | MsG0480021143.01 | 0.818215 | 2.201514e-52 | 1.637781e-49 |
| MsG0280007022.01 | MsG0480021308.01 | 0.822207 | 2.680830e-53 | 2.229077e-50 |
| MsG0280007022.01 | MsG0480021312.01 | 0.817248 | 3.639288e-52 | 2.636471e-49 |
| MsG0280007022.01 | MsG0480022088.01 | 0.816510 | 5.329264e-52 | 3.783491e-49 |
| MsG0280007022.01 | MsG0480022295.01 | 0.800255 | 1.570191e-48 | 7.277377e-46 |
| MsG0280007022.01 | MsG0480022297.01 | 0.841996 | 3.385348e-58 | 5.061976e-55 |
| MsG0280007022.01 | MsG0480022366.01 | 0.820296 | 7.394496e-53 | 5.827770e-50 |
| MsG0280007022.01 | MsG0480022626.01 | 0.825813 | 3.820436e-54 | 3.519807e-51 |
| MsG0280007022.01 | MsG0480022665.01 | 0.804526 | 2.070820e-49 | 1.070089e-46 |
| MsG0280007022.01 | MsG0480022837.01 | 0.823633 | 1.247230e-53 | 1.079884e-50 |
| MsG0280007022.01 | MsG0480023148.01 | 0.802272 | 6.070850e-49 | 2.961240e-46 |
| MsG0280007022.01 | MsG0480023217.01 | 0.808688 | 2.739021e-50 | 1.576290e-47 |
| MsG0280007022.01 | MsG0480023319.01 | 0.826141 | 3.191692e-54 | 2.968080e-51 |
| MsG0280007022.01 | MsG0480023469.01 | 0.823028 | 1.726389e-53 | 1.469461e-50 |
| MsG0280007022.01 | MsG0480023482.01 | 0.845310 | 4.399204e-59 | 7.301192e-56 |
| MsG0280007022.01 | MsG0480023483.01 | 0.849627 | 2.863736e-60 | 5.462471e-57 |
| MsG0280007022.01 | MsG0480023502.01 | 0.808440 | 3.093456e-50 | 1.768940e-47 |
| MsG0280007022.01 | MsG0480023531.01 | 0.805391 | 1.365356e-49 | 7.214643e-47 |
| MsG0280007022.01 | MsG0480023704.01 | 0.825010 | 5.918172e-54 | 5.329416e-51 |
| MsG0280007022.01 | MsG0480023705.01 | 0.804365 | 2.237414e-49 | 1.151452e-46 |
| MsG0280007022.01 | MsG0480023818.01 | 0.842598 | 2.344875e-58 | 3.573133e-55 |
| MsG0280007022.01 | MsG0480023821.01 | 0.822155 | 2.756180e-53 | 2.288233e-50 |
| MsG0280007022.01 | MsG0480023850.01 | 0.810662 | 1.031079e-50 | 6.252614e-48 |
| MsG0280007022.01 | MsG0480023993.01 | 0.834027 | 3.800997e-56 | 4.455318e-53 |
| MsG0280007022.01 | MsG0580024128.01 | 0.828213 | 1.018899e-54 | 1.006136e-51 |
| MsG0280007022.01 | MsG0580024278.01 | 0.814374 | 1.591903e-51 | 1.066301e-48 |
| MsG0280007022.01 | MsG0580024329.01 | 0.807447 | 5.033255e-50 | 2.804093e-47 |
| MsG0280007022.01 | MsG0580024875.01 | 0.801551 | 8.534678e-49 | 4.087454e-46 |
| MsG0280007022.01 | MsG0580025315.01 | 0.837250 | 5.807593e-57 | 7.499665e-54 |
| MsG0280007022.01 | MsG0580025373.01 | 0.807367 | 5.232989e-50 | 2.909255e-47 |
| MsG0280007022.01 | MsG0580025392.01 | 0.822954 | 1.796286e-53 | 1.525687e-50 |
| MsG0280007022.01 | MsG0580025447.01 | 0.817835 | 2.683809e-52 | 1.975899e-49 |
| MsG0280007022.01 | MsG0580025983.01 | 0.801737 | 7.820187e-49 | 3.762761e-46 |
| MsG0280007022.01 | MsG0580026211.01 | 0.831507 | 1.605044e-55 | 1.745365e-52 |
| MsG0280007022.01 | MsG0580026299.01 | 0.812911 | 3.339829e-51 | 2.150110e-48 |
| MsG0280007022.01 | MsG0580027094.01 | 0.818976 | 1.479802e-52 | 1.124425e-49 |
| MsG0280007022.01 | MsG0580027325.01 | 0.843514 | 1.337421e-58 | 2.097470e-55 |
| MsG0280007022.01 | MsG0580028209.01 | 0.810554 | 1.087823e-50 | 6.577552e-48 |
| MsG0280007022.01 | MsG0580029816.01 | 0.827744 | 1.321205e-54 | 1.286848e-51 |
| MsG0280007022.01 | MsG0580029918.01 | 0.808294 | 3.324459e-50 | 1.893690e-47 |
| MsG0280007022.01 | MsG0680032840.01 | 0.806073 | 9.820919e-50 | 5.281058e-47 |
| MsG0280007022.01 | MsG0680033901.01 | 0.827376 | 1.619016e-54 | 1.560427e-51 |
| MsG0280007022.01 | MsG0680033902.01 | 0.834117 | 3.607868e-56 | 4.240458e-53 |
| MsG0280007022.01 | MsG0780035994.01 | 0.812621 | 3.867374e-51 | 2.470806e-48 |
| MsG0280007022.01 | MsG0780036067.01 | 0.817138 | 3.852909e-52 | 2.782924e-49 |
| MsG0280007022.01 | MsG0780036909.01 | 0.828326 | 9.568253e-55 | 9.478981e-52 |
| MsG0280007022.01 | MsG0780037436.01 | 0.830445 | 2.925087e-55 | 3.082309e-52 |
| MsG0280007022.01 | MsG0780037655.01 | 0.833209 | 6.081737e-56 | 6.956345e-53 |
| MsG0280007022.01 | MsG0780037734.01 | 0.839550 | 1.481643e-57 | 2.052980e-54 |
| MsG0280007022.01 | MsG0780038834.01 | 0.812444 | 4.226329e-51 | 2.687795e-48 |
| MsG0280007022.01 | MsG0780039859.01 | 0.833675 | 4.654717e-56 | 5.398305e-53 |
| MsG0280007022.01 | MsG0780039860.01 | 0.823926 | 1.064803e-53 | 9.295824e-51 |
| MsG0280007022.01 | MsG0780039879.01 | 0.821647 | 3.612645e-53 | 2.956336e-50 |
| MsG0280007022.01 | MsG0780039902.01 | 0.805568 | 1.253453e-49 | 6.653500e-47 |
| MsG0280007022.01 | MsG0780040072.01 | 0.804163 | 2.464378e-49 | 1.261691e-46 |
| MsG0280007022.01 | MsG0780040158.01 | 0.819169 | 1.337723e-52 | 1.021713e-49 |
| MsG0280007022.01 | MsG0780040159.01 | 0.845974 | 2.905914e-59 | 4.927713e-56 |
| MsG0280007022.01 | MsG0780040437.01 | 0.803098 | 4.099842e-49 | 2.042226e-46 |
| MsG0280007022.01 | MsG0780040644.01 | 0.849524 | 3.060178e-60 | 5.816938e-57 |
| MsG0280007022.01 | MsG0780040649.01 | 0.827813 | 1.271263e-54 | 1.240663e-51 |
| MsG0280007022.01 | MsG0780040685.01 | 0.800078 | 1.706367e-48 | 7.872940e-46 |
| MsG0280007022.01 | MsG0780040838.01 | 0.800181 | 1.625814e-48 | 7.520809e-46 |
| MsG0280007022.01 | MsG0780040884.01 | 0.827509 | 1.504651e-54 | 1.455545e-51 |
| MsG0280007022.01 | MsG0780041035.01 | 0.813603 | 2.353947e-51 | 1.544168e-48 |
| MsG0280007022.01 | MsG0780041288.01 | 0.801775 | 7.678129e-49 | 3.698114e-46 |
| MsG0280007022.01 | MsG0780041478.01 | 0.816735 | 4.744935e-52 | 3.389526e-49 |
| MsG0280007022.01 | MsG0780041706.01 | 0.802328 | 5.910980e-49 | 2.887525e-46 |
| MsG0280007022.01 | MsG0880041835.01 | 0.819400 | 1.184690e-52 | 9.106664e-50 |
| MsG0280007022.01 | MsG0880042043.01 | 0.850788 | 1.353615e-60 | 2.682120e-57 |
| MsG0280007022.01 | MsG0880042889.01 | 0.830551 | 2.755242e-55 | 2.912322e-52 |
| MsG0280007022.01 | MsG0880043032.01 | 0.830910 | 2.249971e-55 | 2.403836e-52 |
| MsG0280007022.01 | MsG0880044488.01 | 0.823930 | 1.062465e-53 | 9.276544e-51 |
| MsG0280007022.01 | MsG0880044595.01 | 0.811550 | 6.619526e-51 | 4.109646e-48 |
| MsG0280007022.01 | MsG0880045073.01 | 0.802491 | 5.470583e-49 | 2.683322e-46 |
| MsG0280007022.01 | MsG0880045261.01 | 0.839866 | 1.225984e-57 | 1.715474e-54 |
| MsG0280007022.01 | MsG0880045457.01 | 0.822565 | 2.212939e-53 | 1.859092e-50 |
| MsG0280007022.01 | MsG0880045697.01 | 0.840143 | 1.038098e-57 | 1.465367e-54 |
| MsG0280007022.01 | MsG0880045778.01 | 0.813855 | 2.072240e-51 | 1.368610e-48 |
| MsG0280007022.01 | MsG0880046104.01 | 0.827405 | 1.592966e-54 | 1.536561e-51 |
| MsG0280007022.01 | MsG0880046151.01 | 0.803447 | 3.471654e-49 | 1.744966e-46 |
| MsG0280007022.01 | MsG0880046252.01 | 0.842847 | 2.013323e-58 | 3.091780e-55 |
| MsG0280007022.01 | MsG0880046584.01 | 0.836578 | 8.620779e-57 | 1.090892e-53 |
| MsG0280007022.01 | MsG0880046639.01 | 0.840084 | 1.075684e-57 | 1.515749e-54 |
| MsG0280007022.01 | MsG0880046876.01 | 0.808331 | 3.263620e-50 | 1.860945e-47 |
| MsG0280007022.01 | MsG0880047392.01 | 0.808308 | 3.301026e-50 | 1.881041e-47 |
| MsG0280007022.01 | MsG0880047578.01 | 0.825376 | 4.847823e-54 | 4.410758e-51 |
| MsG0280007022.01 | MsG0880047627.01 | 0.823398 | 1.415480e-53 | 1.217239e-50 |
| MsG0280007022.01 | MsG0880047628.01 | 0.815858 | 7.454365e-52 | 5.198636e-49 |
| MsG0280007022.01 | MsG0880047661.01 | 0.834026 | 3.801572e-56 | 4.455901e-53 |
| MsG0280007022.01 | MsG0880047669.01 | 0.828400 | 9.182530e-55 | 9.117344e-52 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007022.01.T01 | MTR_2g019220 | 50.988 | 253 | 25 | 4 | 1 | 169 | 1 | 238 | 8.16e-64 | 198 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MsG0280007022.01.T01 | AT1G30130 | 37.247 | 247 | 62 | 4 | 1 | 169 | 1 | 232 | 1.22e-40 | 139 |
| MsG0280007022.01.T01 | AT1G30130 | 37.247 | 247 | 62 | 4 | 1 | 169 | 1 | 232 | 1.22e-40 | 139 |
| MsG0280007022.01.T01 | AT1G30130 | 37.247 | 247 | 62 | 4 | 1 | 169 | 1 | 232 | 1.22e-40 | 139 |
Find 59 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTAGGTGGATTGACGCTAAA+TGG | 0.269497 | 2:-9521629 | MsG0280007021.01.T01:CDS |
| TATAATTTACATACCATAAA+AGG | 0.293975 | 2:+9523363 | None:intergenic |
| TCCTGGTTGCTTCCTCTTTG+TGG | 0.305566 | 2:+9521690 | None:intergenic |
| TCCTCCAGGCTATAAAATTA+TGG | 0.331657 | 2:-9521815 | MsG0280007021.01.T01:CDS |
| AGTACCTTCGTAGAGAGATA+TGG | 0.376715 | 2:+9524640 | None:intergenic |
| TGGAGGACGAATGGACATAA+TGG | 0.379102 | 2:+9521831 | None:intergenic |
| TCTTTGGTTGATGCCTCATA+AGG | 0.382483 | 2:-9522672 | MsG0280007021.01.T01:intron |
| GTCCTAGAGACAGGTGGTTT+AGG | 0.396339 | 2:-9521647 | MsG0280007021.01.T01:CDS |
| AATAAGAGTGGTGAAGGAAA+TGG | 0.409411 | 2:+9524751 | None:intergenic |
| TAGAGACGTATTGTGAAAAC+TGG | 0.421242 | 2:-9523495 | MsG0280007021.01.T01:intron |
| TAAGGTTGCTGTATGGATAC+TGG | 0.432443 | 2:-9522654 | MsG0280007021.01.T01:intron |
| TATGGGTTCAGCTCCGTCAT+TGG | 0.448545 | 2:+9524658 | None:intergenic |
| ATCCATACAGCAACCTTATG+AGG | 0.458052 | 2:+9522659 | None:intergenic |
| TGATGTCGAGCACAACTTGT+TGG | 0.459330 | 2:+9522714 | None:intergenic |
| CGCCGCAGTAGCGCGTGAAA+AGG | 0.462406 | 2:+9524713 | None:intergenic |
| TACGTGGGAATGGCATATCT+AGG | 0.480461 | 2:+9521765 | None:intergenic |
| CTTCGTCAGCTAAATAATCC+TGG | 0.483547 | 2:+9521673 | None:intergenic |
| TAGCAATAATACACACTCAA+TGG | 0.488999 | 2:+9524291 | None:intergenic |
| GGAGGACGAATGGACATAAT+GGG | 0.489142 | 2:+9521832 | None:intergenic |
| AGGACTGACATGCAAAGCTT+TGG | 0.490500 | 2:+9523383 | None:intergenic |
| TTCGTCCCTGTACGTGGGAA+TGG | 0.491251 | 2:+9521755 | None:intergenic |
| AGAATGCGGATTGAAAATAA+AGG | 0.498652 | 2:+9523416 | None:intergenic |
| ATTATGTCCATTCGTCCTCC+AGG | 0.507853 | 2:-9521829 | MsG0280007021.01.T01:CDS |
| GATATGCCATTCCCACGTAC+AGG | 0.511186 | 2:-9521761 | MsG0280007021.01.T01:CDS |
| TTCAGCTCCGTCATTGGAAG+AGG | 0.511539 | 2:+9524664 | None:intergenic |
| GTCTACCTCAGCGCCGCCAC+CGG | 0.513162 | 2:-9524617 | MsG0280007022.01.T01:intron |
| GTACCTTCGTAGAGAGATAT+GGG | 0.518661 | 2:+9524641 | None:intergenic |
| GCTTCTTCCTCTTCCAATGA+CGG | 0.530349 | 2:-9524671 | MsG0280007022.01.T01:CDS |
| GGATAGAATAAGAGTGGTGA+AGG | 0.535689 | 2:+9524745 | None:intergenic |
| AAGGTTACTCTTTCAGCCCA+TGG | 0.536237 | 2:+9523435 | None:intergenic |
| CTAGAGACAGGTGGTTTAGG+TGG | 0.538191 | 2:-9521644 | MsG0280007021.01.T01:CDS |
| TTTATAGCCTGGAGGACGAA+TGG | 0.541736 | 2:+9521822 | None:intergenic |
| ATTGACAATTCCAGCTAGTG+TGG | 0.542422 | 2:-9524328 | MsG0280007021.01.T01:CDS |
| AAGGAATGGTGAACCGGTGG+CGG | 0.543296 | 2:+9524604 | None:intergenic |
| ACGAAGCAAGTCCTAGAGAC+AGG | 0.547793 | 2:-9521656 | MsG0280007021.01.T01:CDS |
| CACCTAAACCACCTGTCTCT+AGG | 0.548815 | 2:+9521645 | None:intergenic |
| CGCGTGAAAAGGAAGGATAA+TGG | 0.557879 | 2:+9524724 | None:intergenic |
| GATAGAAAACTGCAGTGTTG+TGG | 0.563843 | 2:-9521720 | MsG0280007021.01.T01:CDS |
| TAAAGCTTCGTCCCTGTACG+TGG | 0.567298 | 2:+9521749 | None:intergenic |
| GATAATGGATAGAATAAGAG+TGG | 0.572586 | 2:+9524739 | None:intergenic |
| TGCCTCATAAGGTTGCTGTA+TGG | 0.575098 | 2:-9522661 | MsG0280007021.01.T01:intron |
| ACGTGGGAATGGCATATCTA+GGG | 0.589402 | 2:+9521766 | None:intergenic |
| AGAGGAAGAAGCGGCGCGTG+AGG | 0.594894 | 2:+9524682 | None:intergenic |
| TCCACAAAGAGGAAGCAACC+AGG | 0.603581 | 2:-9521691 | MsG0280007021.01.T01:CDS |
| GGATTGACGCTAAATGGCCA+TGG | 0.618793 | 2:-9521623 | MsG0280007021.01.T01:CDS |
| GCAGTAGCGCGTGAAAAGGA+AGG | 0.621678 | 2:+9524717 | None:intergenic |
| GTGAACCGGTGGCGGCGCTG+AGG | 0.625177 | 2:+9524612 | None:intergenic |
| TCCAGGCTATAAAATTATGG+TGG | 0.628267 | 2:-9521812 | MsG0280007021.01.T01:CDS |
| GTCATTGGAAGAGGAAGAAG+CGG | 0.628278 | 2:+9524673 | None:intergenic |
| ATATGCCATTCCCACGTACA+GGG | 0.629309 | 2:-9521760 | MsG0280007021.01.T01:CDS |
| TCAGGTAACAAATACACCAT+GGG | 0.642717 | 2:-9523451 | MsG0280007021.01.T01:intron |
| TTTGAAGAAGTGCATTGCTG+AGG | 0.643953 | 2:-9524244 | MsG0280007021.01.T01:intron |
| TTCAGGTAACAAATACACCA+TGG | 0.647309 | 2:-9523452 | MsG0280007021.01.T01:intron |
| TTGACAATTCCAGCTAGTGT+GGG | 0.653320 | 2:-9524327 | MsG0280007021.01.T01:CDS |
| TGTGGATTCAGTCCACAAAG+AGG | 0.695546 | 2:-9521702 | MsG0280007021.01.T01:CDS |
| AAAGCTTCGTCCCTGTACGT+GGG | 0.700795 | 2:+9521750 | None:intergenic |
| TTGGCTACTAGATCAGAATG+CGG | 0.714234 | 2:+9523402 | None:intergenic |
| AAGCAAGTCCTAGAGACAGG+TGG | 0.718600 | 2:-9521653 | MsG0280007021.01.T01:CDS |
| GAACCCATATCTCTCTACGA+AGG | 0.724309 | 2:-9524644 | MsG0280007022.01.T01:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAATGACAATTAATAAAA+GGG | - | Chr2:9523308-9523327 | MsG0280007021.01.T01:intron | 10.0% |
| !! | AAATACTTAATCATTTAAAA+TGG | + | Chr2:9523785-9523804 | None:intergenic | 10.0% |
| !! | TAAAAATGACAATTAATAAA+AGG | - | Chr2:9523307-9523326 | MsG0280007021.01.T01:intron | 10.0% |
| !! | ATTATATGTGTAAATTGAAA+AGG | + | Chr2:9522222-9522241 | None:intergenic | 15.0% |
| !! | CATATAAAACATTGTTTATA+TGG | - | Chr2:9524217-9524236 | MsG0280007021.01.T01:intron | 15.0% |
| !! | TATAATTTACATACCATAAA+AGG | + | Chr2:9523042-9523061 | None:intergenic | 15.0% |
| !!! | GTATTTTGATAAAGAAATAT+AGG | - | Chr2:9522330-9522349 | MsG0280007021.01.T01:intron | 15.0% |
| !!! | TTAATTTAAGTTAACTATGT+AGG | + | Chr2:9523285-9523304 | None:intergenic | 15.0% |
| !!! | TTAGTTATTTTGAAAATTGA+GGG | + | Chr2:9524031-9524050 | None:intergenic | 15.0% |
| !!! | TTTGACTTAAAATTCATTTT+TGG | - | Chr2:9523958-9523977 | MsG0280007021.01.T01:intron | 15.0% |
| !! | AAAACTATAAGAAAACTGTT+AGG | + | Chr2:9522688-9522707 | None:intergenic | 20.0% |
| !! | TGAGAAGATTAATTAATTAG+TGG | - | Chr2:9522308-9522327 | MsG0280007021.01.T01:intron | 20.0% |
| !! | TTACGTTTCAATTTAAATGT+AGG | - | Chr2:9521998-9522017 | MsG0280007021.01.T01:intron | 20.0% |
| !! | TTCTATCATAAACCATATTT+GGG | - | Chr2:9522636-9522655 | MsG0280007021.01.T01:intron | 20.0% |
| !! | TTTCAATTCAAATGCAAAAA+TGG | + | Chr2:9524443-9524462 | None:intergenic | 20.0% |
| !!! | AGTTTTCTTATAGTTTTTCT+AGG | - | Chr2:9522691-9522710 | MsG0280007021.01.T01:CDS | 20.0% |
| !!! | ATTCTTTACTTTTTCTCAAT+TGG | - | Chr2:9521945-9521964 | MsG0280007021.01.T01:intron | 20.0% |
| !!! | CAGAAAAGCTATTTTTATTA+AGG | + | Chr2:9523512-9523531 | None:intergenic | 20.0% |
| !!! | GCTTTTGAATAAATATTTGT+TGG | + | Chr2:9523399-9523418 | None:intergenic | 20.0% |
| !!! | GTTAGTTATTTTGAAAATTG+AGG | + | Chr2:9524032-9524051 | None:intergenic | 20.0% |
| !!! | TAAATTTTTTGCTTGAGATT+GGG | - | Chr2:9523903-9523922 | MsG0280007021.01.T01:intron | 20.0% |
| !!! | TATTTTTAAATCCACGATTT+TGG | - | Chr2:9524004-9524023 | MsG0280007021.01.T01:intron | 20.0% |
| !!! | TTCTTTACTTTTTCTCAATT+GGG | - | Chr2:9521946-9521965 | MsG0280007021.01.T01:intron | 20.0% |
| ! | AAAATAAAGGCAGTAAAGTT+GGG | + | Chr2:9524473-9524492 | None:intergenic | 25.0% |
| ! | AATGAAGAAAACACTTACAT+GGG | + | Chr2:9521928-9521947 | None:intergenic | 25.0% |
| ! | AATTCAGGGATCTAAAAATA+TGG | - | Chr2:9524360-9524379 | MsG0280007021.01.T01:intron | 25.0% |
| ! | AGAAGAATAAACTGACAAAA+TGG | + | Chr2:9522742-9522761 | None:intergenic | 25.0% |
| ! | AGCAAAAAATTTACTTCTCA+TGG | + | Chr2:9523896-9523915 | None:intergenic | 25.0% |
| ! | ATTCAGGGATCTAAAAATAT+GGG | - | Chr2:9524361-9524380 | MsG0280007021.01.T01:intron | 25.0% |
| ! | CAACATGTCCATTAAAATAA+AGG | + | Chr2:9524486-9524505 | None:intergenic | 25.0% |
| ! | GTCAGTTTATTCTTCTTTAT+AGG | - | Chr2:9522746-9522765 | MsG0280007021.01.T01:CDS | 25.0% |
| ! | GTTCTATCATAAACCATATT+TGG | - | Chr2:9522635-9522654 | MsG0280007021.01.T01:intron | 25.0% |
| ! | TAAAATAAAGGCAGTAAAGT+TGG | + | Chr2:9524474-9524493 | None:intergenic | 25.0% |
| ! | TAAAATAGTTTCCAAACTCA+GGG | + | Chr2:9523653-9523672 | None:intergenic | 25.0% |
| ! | TCTGTGACATAATACTATTT+AGG | - | Chr2:9524124-9524143 | MsG0280007021.01.T01:intron | 25.0% |
| ! | TTGTTAGGTTATCATGTTAT+AGG | + | Chr2:9522549-9522568 | None:intergenic | 25.0% |
| !! | AGCAATTTAAAATCTCACTT+CGG | - | Chr2:9523849-9523868 | MsG0280007021.01.T01:intron | 25.0% |
| !! | ATTCAGATACTTGATAATTC+AGG | - | Chr2:9522836-9522855 | MsG0280007021.01.T01:intron | 25.0% |
| !! | CGTAAAAATCAAATTTTGCA+TGG | + | Chr2:9521983-9522002 | None:intergenic | 25.0% |
| !! | TATTTTGTCTCATACGATTT+TGG | + | Chr2:9524388-9524407 | None:intergenic | 25.0% |
| !! | TTGTCATGATGAATTTTCAT+TGG | - | Chr2:9523824-9523843 | MsG0280007021.01.T01:intron | 25.0% |
| !!! | ATAGCTTTTCTGCATTTTTT+CGG | - | Chr2:9523520-9523539 | MsG0280007021.01.T01:intron | 25.0% |
| !!! | CGATGTTTTTTTTTTGTTTC+AGG | - | Chr2:9522933-9522952 | MsG0280007021.01.T01:intron | 25.0% |
| !!! | CTTTACTGCCTTTATTTTAA+TGG | - | Chr2:9524475-9524494 | MsG0280007021.01.T01:intron | 25.0% |
| !!! | GTAAATTTTTTGCTTGAGAT+TGG | - | Chr2:9523902-9523921 | MsG0280007021.01.T01:intron | 25.0% |
| !!! | TATTTTTAGATCCCTGAATT+TGG | + | Chr2:9524360-9524379 | None:intergenic | 25.0% |
| !!! | TCAATTGATTTTGTTTGACA+AGG | - | Chr2:9524541-9524560 | MsG0280007021.01.T01:CDS | 25.0% |
| !!! | TGGTTTTTTCACTTTTATGT+GGG | - | Chr2:9522800-9522819 | MsG0280007021.01.T01:CDS | 25.0% |
| AAAATCAACCCAAATGCATA+TGG | - | Chr2:9524308-9524327 | MsG0280007021.01.T01:CDS | 30.0% | |
| AAATCAACCCAAATGCATAT+GGG | - | Chr2:9524309-9524328 | MsG0280007021.01.T01:CDS | 30.0% | |
| AATTGAAAACATGTCCAAAG+AGG | + | Chr2:9524527-9524546 | None:intergenic | 30.0% | |
| ACTTCTCATGGAAGAAATAA+TGG | + | Chr2:9523884-9523903 | None:intergenic | 30.0% | |
| ATGGAGAAAATTCAATTGGT+AGG | - | Chr2:9522463-9522482 | MsG0280007021.01.T01:intron | 30.0% | |
| ATGTAGCTATCTCATTTAGT+AGG | + | Chr2:9522595-9522614 | None:intergenic | 30.0% | |
| CAATGAAAAGTTACTACTCT+TGG | + | Chr2:9523372-9523391 | None:intergenic | 30.0% | |
| CTTCTTTATAGGATTTCTCT+TGG | - | Chr2:9522757-9522776 | MsG0280007021.01.T01:CDS | 30.0% | |
| GAACATTGTATTGAAAGGAA+TGG | + | Chr2:9521815-9521834 | None:intergenic | 30.0% | |
| GAAGAGGAAAACACAATATA+TGG | + | Chr2:9523172-9523191 | None:intergenic | 30.0% | |
| GAATGAAGAAAACACTTACA+TGG | + | Chr2:9521929-9521948 | None:intergenic | 30.0% | |
| GCATAATATGATTCAAACTG+AGG | - | Chr2:9523203-9523222 | MsG0280007021.01.T01:intron | 30.0% | |
| GCATATGGAGAAAATTCAAT+TGG | - | Chr2:9522459-9522478 | MsG0280007021.01.T01:intron | 30.0% | |
| GTAAAATAGTTTCCAAACTC+AGG | + | Chr2:9523654-9523673 | None:intergenic | 30.0% | |
| TAACAAAGAATTTGTCTGAG+TGG | - | Chr2:9522375-9522394 | MsG0280007021.01.T01:intron | 30.0% | |
| TACTAAATGAGATAGCTACA+TGG | - | Chr2:9522594-9522613 | MsG0280007021.01.T01:intron | 30.0% | |
| TAGCAATAATACACACTCAA+TGG | + | Chr2:9522114-9522133 | None:intergenic | 30.0% | |
| TCCTAAAATCTGCATAGAAA+TGG | + | Chr2:9523065-9523084 | None:intergenic | 30.0% | |
| TGGAGAAAATTCAATTGGTA+GGG | - | Chr2:9522464-9522483 | MsG0280007021.01.T01:intron | 30.0% | |
| TTTGTCGCTAAACATAGTAA+GGG | - | Chr2:9522273-9522292 | MsG0280007021.01.T01:intron | 30.0% | |
| ! | ACCATTTCTATGCAGATTTT+AGG | - | Chr2:9523061-9523080 | MsG0280007021.01.T01:intron | 30.0% |
| ! | AGAATGCGGATTGAAAATAA+AGG | + | Chr2:9522989-9523008 | None:intergenic | 30.0% |
| ! | ATTGTGTTTTCCTCTTCTTT+TGG | - | Chr2:9523175-9523194 | MsG0280007021.01.T01:intron | 30.0% |
| ! | CAATTTAAAATCTCACTTCG+GGG | - | Chr2:9523851-9523870 | MsG0280007021.01.T01:intron | 30.0% |
| ! | GCAATTTAAAATCTCACTTC+GGG | - | Chr2:9523850-9523869 | MsG0280007021.01.T01:intron | 30.0% |
| !! | GATAATGGATAGAATAAGAG+TGG | + | Chr2:9521666-9521685 | None:intergenic | 30.0% |
| !!! | CATTTTTGGTTCCTCTATTT+TGG | - | Chr2:9523972-9523991 | MsG0280007021.01.T01:intron | 30.0% |
| !!! | GTGGTTTTTTCACTTTTATG+TGG | - | Chr2:9522799-9522818 | MsG0280007021.01.T01:CDS | 30.0% |
| !!! | TGGGTTGATTTTTGATGATT+TGG | + | Chr2:9524300-9524319 | None:intergenic | 30.0% |
| !!! | TGGTTGTTTTTGTTGTTGTT+AGG | + | Chr2:9522564-9522583 | None:intergenic | 30.0% |
| AAAACCGAATGACCAAATTC+AGG | - | Chr2:9524345-9524364 | MsG0280007021.01.T01:intron | 35.0% | |
| AAACCGAATGACCAAATTCA+GGG | - | Chr2:9524346-9524365 | MsG0280007021.01.T01:intron | 35.0% | |
| AACTATGACAGGATATGCTT+GGG | - | Chr2:9523565-9523584 | MsG0280007021.01.T01:intron | 35.0% | |
| AATAAGAGTGGTGAAGGAAA+TGG | + | Chr2:9521654-9521673 | None:intergenic | 35.0% | |
| AATATCAAAGCAAGTGATCC+TGG | - | Chr2:9523594-9523613 | MsG0280007021.01.T01:intron | 35.0% | |
| AGCTATCTCATTTAGTAGGA+TGG | + | Chr2:9522591-9522610 | None:intergenic | 35.0% | |
| AGCTTCAAAATGTGTAACTG+GGG | + | Chr2:9524059-9524078 | None:intergenic | 35.0% | |
| CAACACATACATATCATGGT+TGG | - | Chr2:9523245-9523264 | MsG0280007021.01.T01:intron | 35.0% | |
| CAACCAACACATACATATCA+TGG | - | Chr2:9523241-9523260 | MsG0280007021.01.T01:intron | 35.0% | |
| CAACCATGATATGTATGTGT+TGG | + | Chr2:9523247-9523266 | None:intergenic | 35.0% | |
| CAGCTTCAAAATGTGTAACT+GGG | + | Chr2:9524060-9524079 | None:intergenic | 35.0% | |
| CTTCATCTGGAAAGATGATT+GGG | + | Chr2:9521879-9521898 | None:intergenic | 35.0% | |
| CTTTGTCGCTAAACATAGTA+AGG | - | Chr2:9522272-9522291 | MsG0280007021.01.T01:intron | 35.0% | |
| GAAATACCAGAACAACACTT+TGG | - | Chr2:9523925-9523944 | MsG0280007021.01.T01:intron | 35.0% | |
| GAGAAAATTCAATTGGTAGG+GGG | - | Chr2:9522466-9522485 | MsG0280007021.01.T01:intron | 35.0% | |
| GGAGAAAATTCAATTGGTAG+GGG | - | Chr2:9522465-9522484 | MsG0280007021.01.T01:intron | 35.0% | |
| GTAGCGAACATTGTATTGAA+AGG | + | Chr2:9521820-9521839 | None:intergenic | 35.0% | |
| GTGCAATATTGCACATGTTA+AGG | - | Chr2:9523343-9523362 | MsG0280007021.01.T01:intron | 35.0% | |
| TACAACAACCACCAAAATAG+AGG | + | Chr2:9523986-9524005 | None:intergenic | 35.0% | |
| TAGAGACGTATTGTGAAAAC+TGG | - | Chr2:9522907-9522926 | MsG0280007021.01.T01:intron | 35.0% | |
| TATGCAATGACCAAAAGAAG+AGG | + | Chr2:9523188-9523207 | None:intergenic | 35.0% | |
| TATTGAAAGGAATGGTGAAC+CGG | + | Chr2:9521807-9521826 | None:intergenic | 35.0% | |
| TCAGCTTCAAAATGTGTAAC+TGG | + | Chr2:9524061-9524080 | None:intergenic | 35.0% | |
| TCAGGTAACAAATACACCAT+GGG | - | Chr2:9522951-9522970 | MsG0280007021.01.T01:intron | 35.0% | |
| TCCAGGCTATAAAATTATGG+TGG | - | Chr2:9524590-9524609 | MsG0280007022.01.T01:intron | 35.0% | |
| TCCTCCAGGCTATAAAATTA+TGG | - | Chr2:9524587-9524606 | MsG0280007022.01.T01:intron | 35.0% | |
| TGGTTGAGTGAAAAACAGTT+TGG | - | Chr2:9522777-9522796 | MsG0280007021.01.T01:CDS | 35.0% | |
| TTCAGGTAACAAATACACCA+TGG | - | Chr2:9522950-9522969 | MsG0280007021.01.T01:intron | 35.0% | |
| TTCTCCATATGCAATAGTCA+GGG | + | Chr2:9522451-9522470 | None:intergenic | 35.0% | |
| TTGAGTGAAAAACAGTTTGG+TGG | - | Chr2:9522780-9522799 | MsG0280007021.01.T01:CDS | 35.0% | |
| TTTCTCCATATGCAATAGTC+AGG | + | Chr2:9522452-9522471 | None:intergenic | 35.0% | |
| ! | ACCATAATTTTATAGCCTGG+AGG | + | Chr2:9524591-9524610 | None:intergenic | 35.0% |
| ! | CAATGAGTTGAACCCAAATA+TGG | + | Chr2:9522651-9522670 | None:intergenic | 35.0% |
| ! | GATATGCTAAGATTTTCTCC+AGG | + | Chr2:9523615-9523634 | None:intergenic | 35.0% |
| ! | TCCACCATAATTTTATAGCC+TGG | + | Chr2:9524594-9524613 | None:intergenic | 35.0% |
| ! | TTTAATGGACATGTTGCCTT+TGG | - | Chr2:9524490-9524509 | MsG0280007021.01.T01:intron | 35.0% |
| ! | TTTGCATGTCAGTCCTTTTA+TGG | - | Chr2:9523026-9523045 | MsG0280007021.01.T01:intron | 35.0% |
| !! | TCAAATTTTGCATGGTTCTG+AGG | + | Chr2:9521975-9521994 | None:intergenic | 35.0% |
| !!! | CAAATTTTGCATGGTTCTGA+GGG | + | Chr2:9521974-9521993 | None:intergenic | 35.0% |
| !!! | TTTTGGTTCCTCTATTTTGG+TGG | - | Chr2:9523975-9523994 | MsG0280007021.01.T01:intron | 35.0% |
| AAACACTTACATGGGTCCAT+TGG | + | Chr2:9521920-9521939 | None:intergenic | 40.0% | |
| AAATTGAGGGACCAAAATCG+TGG | + | Chr2:9524018-9524037 | None:intergenic | 40.0% | |
| AAGAATTTGTCTGAGTGGTG+AGG | - | Chr2:9522380-9522399 | MsG0280007021.01.T01:intron | 40.0% | |
| AGAATTTGTCTGAGTGGTGA+GGG | - | Chr2:9522381-9522400 | MsG0280007021.01.T01:intron | 40.0% | |
| AGCATATCCTGTCATAGTTC+AGG | + | Chr2:9523564-9523583 | None:intergenic | 40.0% | |
| AGTACCTTCGTAGAGAGATA+TGG | + | Chr2:9521765-9521784 | None:intergenic | 40.0% | |
| ATCCATACAGCAACCTTATG+AGG | + | Chr2:9523746-9523765 | None:intergenic | 40.0% | |
| ATTGACAATTCCAGCTAGTG+TGG | - | Chr2:9522074-9522093 | MsG0280007021.01.T01:intron | 40.0% | |
| CTTCGTCAGCTAAATAATCC+TGG | + | Chr2:9524732-9524751 | None:intergenic | 40.0% | |
| GAACTATGACAGGATATGCT+TGG | - | Chr2:9523564-9523583 | MsG0280007021.01.T01:intron | 40.0% | |
| GATAGAAAACTGCAGTGTTG+TGG | - | Chr2:9524682-9524701 | MsG0280007022.01.T01:CDS | 40.0% | |
| GATCCCTGAATTTGGTCATT+CGG | + | Chr2:9524352-9524371 | None:intergenic | 40.0% | |
| GCTTCATCTGGAAAGATGAT+TGG | + | Chr2:9521880-9521899 | None:intergenic | 40.0% | |
| GGAGTCGAACATGTTTATGA+TGG | + | Chr2:9522721-9522740 | None:intergenic | 40.0% | |
| GGATAGAATAAGAGTGGTGA+AGG | + | Chr2:9521660-9521679 | None:intergenic | 40.0% | |
| GTACCTTCGTAGAGAGATAT+GGG | + | Chr2:9521764-9521783 | None:intergenic | 40.0% | |
| TAAGGTTGCTGTATGGATAC+TGG | - | Chr2:9523748-9523767 | MsG0280007021.01.T01:intron | 40.0% | |
| TCATTTAGTAGGATGGAGCT+TGG | + | Chr2:9522584-9522603 | None:intergenic | 40.0% | |
| TGATCCCTGACTATTGCATA+TGG | - | Chr2:9522444-9522463 | MsG0280007021.01.T01:intron | 40.0% | |
| TGGAACAACATCAACCTCTT+TGG | - | Chr2:9524510-9524529 | MsG0280007021.01.T01:CDS | 40.0% | |
| TTACATGGGTCCATTGGTAT+CGG | + | Chr2:9521914-9521933 | None:intergenic | 40.0% | |
| TTGACAATTCCAGCTAGTGT+GGG | - | Chr2:9522075-9522094 | MsG0280007021.01.T01:intron | 40.0% | |
| TTGGCTACTAGATCAGAATG+CGG | + | Chr2:9523003-9523022 | None:intergenic | 40.0% | |
| ! | TCAGATCACGCAGTTTTCTT+TGG | - | Chr2:9523714-9523733 | MsG0280007021.01.T01:intron | 40.0% |
| ! | TCTTTGGTTGATGCCTCATA+AGG | - | Chr2:9523730-9523749 | MsG0280007021.01.T01:intron | 40.0% |
| ! | TTTGAAGAAGTGCATTGCTG+AGG | - | Chr2:9522158-9522177 | MsG0280007021.01.T01:intron | 40.0% |
| !! | AGAGGTTGATGTTGTTCCAA+AGG | + | Chr2:9524509-9524528 | None:intergenic | 40.0% |
| !! | GTCCATTGGTATCGGTAATT+TGG | + | Chr2:9521906-9521925 | None:intergenic | 40.0% |
| !! | TACACACCAAAGTGTTGTTC+TGG | + | Chr2:9523934-9523953 | None:intergenic | 40.0% |
| !! | TTAGGTGGATTGACGCTAAA+TGG | - | Chr2:9524773-9524792 | MsG0280007022.01.T01:CDS | 40.0% |
| AAGGTTACTCTTTCAGCCCA+TGG | + | Chr2:9522970-9522989 | None:intergenic | 45.0% | |
| ACAAAGTTTCGCACACATGG+TGG | + | Chr2:9522525-9522544 | None:intergenic | 45.0% | |
| ACGTGGGAATGGCATATCTA+GGG | + | Chr2:9524639-9524658 | None:intergenic | 45.0% | |
| AGGACTGACATGCAAAGCTT+TGG | + | Chr2:9523022-9523041 | None:intergenic | 45.0% | |
| AGTTGAGCCACTTAAGCAAG+TGG | - | Chr2:9522412-9522431 | MsG0280007021.01.T01:intron | 45.0% | |
| ATATGCCATTCCCACGTACA+GGG | - | Chr2:9524642-9524661 | MsG0280007022.01.T01:CDS | 45.0% | |
| ATTATGTCCATTCGTCCTCC+AGG | - | Chr2:9524573-9524592 | MsG0280007021.01.T01:CDS | 45.0% | |
| CAAAGTTTCGCACACATGGT+GGG | + | Chr2:9522524-9522543 | None:intergenic | 45.0% | |
| CATCTGGAAAGATGATTGGG+TGG | + | Chr2:9521876-9521895 | None:intergenic | 45.0% | |
| CGCCAAATTACCGATACCAA+TGG | - | Chr2:9521901-9521920 | MsG0280007021.01.T01:intron | 45.0% | |
| CGCGTGAAAAGGAAGGATAA+TGG | + | Chr2:9521681-9521700 | None:intergenic | 45.0% | |
| GAACCCATATCTCTCTACGA+AGG | - | Chr2:9521758-9521777 | MsG0280007021.01.T01:CDS | 45.0% | |
| GCTTCTTCCTCTTCCAATGA+CGG | - | Chr2:9521731-9521750 | MsG0280007021.01.T01:CDS | 45.0% | |
| GGAGGACGAATGGACATAAT+GGG | + | Chr2:9524573-9524592 | None:intergenic | 45.0% | |
| GTAATTTGGCGAGCTTCATC+TGG | + | Chr2:9521892-9521911 | None:intergenic | 45.0% | |
| GTCATTGGAAGAGGAAGAAG+CGG | + | Chr2:9521732-9521751 | None:intergenic | 45.0% | |
| GTCTGCTCCCATATGCATTT+GGG | + | Chr2:9524319-9524338 | None:intergenic | 45.0% | |
| GTTACTTCCTCAGTTTCGCT+CGG | - | Chr2:9523145-9523164 | MsG0280007021.01.T01:intron | 45.0% | |
| TACGTGGGAATGGCATATCT+AGG | + | Chr2:9524640-9524659 | None:intergenic | 45.0% | |
| TCAGTTCATCACCCTGAGTT+TGG | - | Chr2:9523639-9523658 | MsG0280007021.01.T01:intron | 45.0% | |
| TGATGTCGAGCACAACTTGT+TGG | + | Chr2:9523691-9523710 | None:intergenic | 45.0% | |
| TGCCTCATAAGGTTGCTGTA+TGG | - | Chr2:9523741-9523760 | MsG0280007021.01.T01:intron | 45.0% | |
| TGGAGGACGAATGGACATAA+TGG | + | Chr2:9524574-9524593 | None:intergenic | 45.0% | |
| TGTCTGCTCCCATATGCATT+TGG | + | Chr2:9524320-9524339 | None:intergenic | 45.0% | |
| TGTGGATTCAGTCCACAAAG+AGG | - | Chr2:9524700-9524719 | MsG0280007022.01.T01:CDS | 45.0% | |
| TGTTCATATCCCACACTAGC+TGG | + | Chr2:9522087-9522106 | None:intergenic | 45.0% | |
| TTTATAGCCTGGAGGACGAA+TGG | + | Chr2:9524583-9524602 | None:intergenic | 45.0% | |
| ! | CCTGTCATAGTTCAGGTTCA+GGG | + | Chr2:9523557-9523576 | None:intergenic | 45.0% |
| ! | TCCTGTCATAGTTCAGGTTC+AGG | + | Chr2:9523558-9523577 | None:intergenic | 45.0% |
| AAAGCTTCGTCCCTGTACGT+GGG | + | Chr2:9524655-9524674 | None:intergenic | 50.0% | |
| AAGCAAGTCCTAGAGACAGG+TGG | - | Chr2:9524749-9524768 | MsG0280007022.01.T01:CDS | 50.0% | |
| ACGAAGCAAGTCCTAGAGAC+AGG | - | Chr2:9524746-9524765 | MsG0280007022.01.T01:CDS | 50.0% | |
| AGCCACTTAAGCAAGTGGTC+AGG | - | Chr2:9522417-9522436 | MsG0280007021.01.T01:intron | 50.0% | |
| ATATGGACCGAGCGAAACTG+AGG | + | Chr2:9523155-9523174 | None:intergenic | 50.0% | |
| CACCTAAACCACCTGTCTCT+AGG | + | Chr2:9524760-9524779 | None:intergenic | 50.0% | |
| CCACTTAAGCAAGTGGTCAG+GGG | - | Chr2:9522419-9522438 | MsG0280007021.01.T01:intron | 50.0% | |
| CCCTGAACCTGAACTATGAC+AGG | - | Chr2:9523554-9523573 | MsG0280007021.01.T01:intron | 50.0% | |
| CTAGAGACAGGTGGTTTAGG+TGG | - | Chr2:9524758-9524777 | MsG0280007022.01.T01:CDS | 50.0% | |
| GACAGGATATGCTTGGGAGT+TGG | - | Chr2:9523571-9523590 | MsG0280007021.01.T01:intron | 50.0% | |
| GATATGCCATTCCCACGTAC+AGG | - | Chr2:9524641-9524660 | MsG0280007022.01.T01:CDS | 50.0% | |
| GCCACTTAAGCAAGTGGTCA+GGG | - | Chr2:9522418-9522437 | MsG0280007021.01.T01:intron | 50.0% | |
| GGATTGACGCTAAATGGCCA+TGG | - | Chr2:9524779-9524798 | MsG0280007022.01.T01:CDS | 50.0% | |
| GGCACAAAGTTTCGCACACA+TGG | + | Chr2:9522528-9522547 | None:intergenic | 50.0% | |
| GTCCTAGAGACAGGTGGTTT+AGG | - | Chr2:9524755-9524774 | MsG0280007022.01.T01:CDS | 50.0% | |
| TAAAGCTTCGTCCCTGTACG+TGG | + | Chr2:9524656-9524675 | None:intergenic | 50.0% | |
| TATGGGTTCAGCTCCGTCAT+TGG | + | Chr2:9521747-9521766 | None:intergenic | 50.0% | |
| TCCACAAAGAGGAAGCAACC+AGG | - | Chr2:9524711-9524730 | MsG0280007022.01.T01:CDS | 50.0% | |
| TCCTGGTTGCTTCCTCTTTG+TGG | + | Chr2:9524715-9524734 | None:intergenic | 50.0% | |
| TGAAAGGAATGGTGAACCGG+TGG | + | Chr2:9521804-9521823 | None:intergenic | 50.0% | |
| TTCAGCTCCGTCATTGGAAG+AGG | + | Chr2:9521741-9521760 | None:intergenic | 50.0% | |
| ! | TTCCTTTTCACGCGCTACTG+CGG | - | Chr2:9521687-9521706 | MsG0280007021.01.T01:CDS | 50.0% |
| AAGGAATGGTGAACCGGTGG+CGG | + | Chr2:9521801-9521820 | None:intergenic | 55.0% | |
| ACGCACCTTGTGTGGTTGGA+AGG | - | Chr2:9522492-9522511 | MsG0280007021.01.T01:intron | 55.0% | |
| CCCCTGACCACTTGCTTAAG+TGG | + | Chr2:9522422-9522441 | None:intergenic | 55.0% | |
| CGCACCTTGTGTGGTTGGAA+GGG | - | Chr2:9522493-9522512 | MsG0280007021.01.T01:intron | 55.0% | |
| GAGAACGCACCTTGTGTGGT+TGG | - | Chr2:9522488-9522507 | MsG0280007021.01.T01:intron | 55.0% | |
| GCACCTTGTGTGGTTGGAAG+GGG | - | Chr2:9522494-9522513 | MsG0280007021.01.T01:intron | 55.0% | |
| GCAGTAGCGCGTGAAAAGGA+AGG | + | Chr2:9521688-9521707 | None:intergenic | 55.0% | |
| TCTCCCCTTCCAACCACACA+AGG | + | Chr2:9522500-9522519 | None:intergenic | 55.0% | |
| TTCGTCCCTGTACGTGGGAA+TGG | + | Chr2:9524650-9524669 | None:intergenic | 55.0% | |
| AGATGATTGGGTGGCGCGTG+AGG | + | Chr2:9521867-9521886 | None:intergenic | 60.0% | |
| AGAGGAAGAAGCGGCGCGTG+AGG | + | Chr2:9521723-9521742 | None:intergenic | 65.0% | |
| CGCCGCAGTAGCGCGTGAAA+AGG | + | Chr2:9521692-9521711 | None:intergenic | 65.0% | |
| GGGGGAGAACGCACCTTGTG+TGG | - | Chr2:9522484-9522503 | MsG0280007021.01.T01:intron | 65.0% | |
| GTCTACCTCAGCGCCGCCAC+CGG | - | Chr2:9521785-9521804 | MsG0280007021.01.T01:CDS | 70.0% | |
| TGGGTGGCGCGTGAGGTGCA+CGG | + | Chr2:9521860-9521879 | None:intergenic | 70.0% | |
| GCGCGTGAGGTGCACGGTCG+AGG | + | Chr2:9521854-9521873 | None:intergenic | 75.0% | |
| ! | GTGAACCGGTGGCGGCGCTG+AGG | + | Chr2:9521793-9521812 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| Chr2 | gene | 9521617 | 9524807 | 9521617 | ID=MsG0280007022.01;Name=MsG0280007022.01 |
| Chr2 | mRNA | 9521617 | 9524807 | 9521617 | ID=MsG0280007022.01.T01;Parent=MsG0280007022.01;Name=MsG0280007022.01.T01;_AED=0.40;_eAED=0.64;_QI=0|0|0|1|0|0|5|243|171 |
| Chr2 | exon | 9524618 | 9524807 | 9524618 | ID=MsG0280007022.01.T01:exon:8365;Parent=MsG0280007022.01.T01 |
| Chr2 | exon | 9524245 | 9524336 | 9524245 | ID=MsG0280007022.01.T01:exon:8364;Parent=MsG0280007022.01.T01 |
| Chr2 | exon | 9523377 | 9523514 | 9523377 | ID=MsG0280007022.01.T01:exon:8363;Parent=MsG0280007022.01.T01 |
| Chr2 | exon | 9522651 | 9522744 | 9522651 | ID=MsG0280007022.01.T01:exon:8362;Parent=MsG0280007022.01.T01 |
| Chr2 | exon | 9521617 | 9521861 | 9521617 | ID=MsG0280007022.01.T01:exon:8361;Parent=MsG0280007022.01.T01 |
| Chr2 | CDS | 9524618 | 9524807 | 9524618 | ID=MsG0280007022.01.T01:cds;Parent=MsG0280007022.01.T01 |
| Chr2 | CDS | 9524245 | 9524336 | 9524245 | ID=MsG0280007022.01.T01:cds;Parent=MsG0280007022.01.T01 |
| Chr2 | CDS | 9523377 | 9523514 | 9523377 | ID=MsG0280007022.01.T01:cds;Parent=MsG0280007022.01.T01 |
| Chr2 | CDS | 9522651 | 9522744 | 9522651 | ID=MsG0280007022.01.T01:cds;Parent=MsG0280007022.01.T01 |
| Chr2 | CDS | 9521860 | 9521861 | 9521860 | ID=MsG0280007022.01.T01:cds;Parent=MsG0280007022.01.T01 |
| Chr2 | three_prime_UTR | 9521617 | 9521859 | 9521617 | ID=MsG0280007022.01.T01:three_prime_utr;Parent=MsG0280007022.01.T01 |
| Gene Sequence |
| Protein sequence |
