AlfalfaGEDB | Msa1296330

M. sativa cultivar zhongmu-4 / Msa1296330

KEGG: -
GO: -
PFAM: PF03168.16

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1296330	XP_039688861.1	97.281	331	8	1	1	330	1	331	0.0	667

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1296330	A0A396IJ55	97.281	331	8	1	1	330	1	331	0.0	667

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0006840	Msa1296330	0.803487	3.405936e-49	-8.615850e-47
Msa0015570	Msa1296330	0.809061	2.279477e-50	-8.615850e-47
Msa0016530	Msa1296330	0.801480	8.825931e-49	-8.615850e-47
Msa0018920	Msa1296330	0.824623	7.303280e-54	-8.615850e-47
Msa0020540	Msa1296330	0.822812	1.938635e-53	-8.615850e-47
Msa0032980	Msa1296330	0.823054	1.702761e-53	-8.615850e-47
Msa0040640	Msa1296330	0.813364	2.657120e-51	-8.615850e-47
Msa0049450	Msa1296330	0.806021	1.007154e-49	-8.615850e-47
Msa0067060	Msa1296330	0.806808	6.872631e-50	-8.615850e-47
Msa0091350	Msa1296330	0.845913	3.019343e-59	-8.615850e-47
Msa0093860	Msa1296330	0.818987	1.471266e-52	-8.615850e-47
Msa0106630	Msa1296330	0.811582	6.514073e-51	-8.615850e-47
Msa0112670	Msa1296330	0.821397	4.127482e-53	-8.615850e-47
Msa0607330	Msa1296330	0.802306	5.973384e-49	-8.615850e-47
Msa0608350	Msa1296330	0.866464	2.797230e-65	-8.615850e-47
Msa0613630	Msa1296330	0.838042	3.638123e-57	-8.615850e-47
Msa0614550	Msa1296330	0.810888	9.211119e-51	-8.615850e-47
Msa0620500	Msa1296330	0.816104	6.568119e-52	-8.615850e-47
Msa0622920	Msa1296330	0.812472	4.167357e-51	-8.615850e-47
Msa0639190	Msa1296330	0.800463	1.424165e-48	-8.615850e-47
Msa0640800	Msa1296330	0.800840	1.193241e-48	-8.615850e-47
Msa0645340	Msa1296330	0.826422	2.736587e-54	-8.615850e-47
Msa0647440	Msa1296330	0.813665	2.281491e-51	-8.615850e-47
Msa0648760	Msa1296330	0.849298	3.537504e-60	-8.615850e-47
Msa0653160	Msa1296330	0.801222	9.971356e-49	-8.615850e-47
Msa0654740	Msa1296330	0.811936	5.454349e-51	-8.615850e-47
Msa0657210	Msa1296330	0.809861	1.534622e-50	-8.615850e-47
Msa0688620	Msa1296330	0.829211	5.845480e-55	-8.615850e-47
Msa0690320	Msa1296330	0.834688	2.593254e-56	-8.615850e-47
Msa0691270	Msa1296330	0.862830	3.838552e-64	-8.615850e-47
Msa0695560	Msa1296330	0.809958	1.462962e-50	-8.615850e-47
Msa0698730	Msa1296330	0.815416	9.348118e-52	-8.615850e-47
Msa0700500	Msa1296330	0.830408	2.986373e-55	-8.615850e-47
Msa0701250	Msa1296330	0.818725	1.686992e-52	-8.615850e-47
Msa0713920	Msa1296330	0.812410	4.299313e-51	-8.615850e-47
Msa0714520	Msa1296330	0.815747	7.888510e-52	-8.615850e-47
Msa0717900	Msa1296330	0.822221	2.659740e-53	-8.615850e-47
Msa0720280	Msa1296330	0.813658	2.289611e-51	-8.615850e-47
Msa0743440	Msa1296330	0.800075	1.708207e-48	-8.615850e-47
Msa0749190	Msa1296330	0.830586	2.701054e-55	-8.615850e-47
Msa0750520	Msa1296330	0.829181	5.943306e-55	-8.615850e-47
Msa0763550	Msa1296330	0.819149	1.351381e-52	-8.615850e-47
Msa0803140	Msa1296330	0.809015	2.331658e-50	-8.615850e-47
Msa0816080	Msa1296330	0.834541	2.824513e-56	-8.615850e-47
Msa0817360	Msa1296330	0.820116	8.129103e-53	-8.615850e-47
Msa0841500	Msa1296330	0.806853	6.723716e-50	-8.615850e-47
Msa0123320	Msa1296330	0.821854	3.236298e-53	-8.615850e-47
Msa0125590	Msa1296330	0.812947	3.279805e-51	-8.615850e-47
Msa0127340	Msa1296330	0.833136	6.340267e-56	-8.615850e-47
Msa0127680	Msa1296330	0.801041	1.085454e-48	-8.615850e-47
Msa0140380	Msa1296330	0.825126	5.556871e-54	-8.615850e-47
Msa0153210	Msa1296330	0.822708	2.050459e-53	-8.615850e-47
Msa0156050	Msa1296330	0.820998	5.099982e-53	-8.615850e-47
Msa0156090	Msa1296330	0.825476	4.591970e-54	-8.615850e-47
Msa0159590	Msa1296330	0.815664	8.234775e-52	-8.615850e-47
Msa0165830	Msa1296330	0.827169	1.814321e-54	-8.615850e-47
Msa0165840	Msa1296330	0.811928	5.478477e-51	-8.615850e-47
Msa0170070	Msa1296330	0.809650	1.703518e-50	-8.615850e-47
Msa0184700	Msa1296330	0.821596	3.711146e-53	-8.615850e-47
Msa0232760	Msa1296330	0.809931	1.482794e-50	-8.615850e-47
Msa1252790	Msa1296330	0.804814	1.802899e-49	-8.615850e-47
Msa1254420	Msa1296330	0.822799	1.952826e-53	-8.615850e-47
Msa1254540	Msa1296330	0.826242	3.020909e-54	-8.615850e-47
Msa1261050	Msa1296330	0.807901	4.030975e-50	-8.615850e-47
Msa1263740	Msa1296330	0.806292	8.830151e-50	-8.615850e-47
Msa1263780	Msa1296330	0.801768	7.702986e-49	-8.615850e-47
Msa1266690	Msa1296330	0.805132	1.547404e-49	-8.615850e-47
Msa1267930	Msa1296330	0.816845	4.481563e-52	-8.615850e-47
Msa1279120	Msa1296330	0.801930	7.138005e-49	-8.615850e-47
Msa1294460	Msa1296330	0.831563	1.554997e-55	-8.615850e-47
Msa1294790	Msa1296330	0.858300	9.058382e-63	-8.615850e-47
Msa1296330	Msa1299980	0.828324	9.580478e-55	-8.615850e-47
Msa1296330	Msa1300460	0.834329	3.191406e-56	-8.615850e-47
Msa1296330	Msa1305780	0.803136	4.025823e-49	-8.615850e-47
Msa1296330	Msa1305920	0.809471	1.861491e-50	-8.615850e-47
Msa1296330	Msa1331650	0.815324	9.801354e-52	-8.615850e-47
Msa1296330	Msa1332950	0.801625	8.244929e-49	-8.615850e-47
Msa1296330	Msa1333360	0.801944	7.091066e-49	-8.615850e-47
Msa1296330	Msa1342810	0.825558	4.391425e-54	-8.615850e-47
Msa1296330	Msa1361930	0.815665	8.229013e-52	-8.615850e-47
Msa1296330	Msa1381470	0.811297	7.511006e-51	-8.615850e-47
Msa1296330	Msa1381800	0.826854	2.159062e-54	-8.615850e-47
Msa1296330	Msa1389820	0.804738	1.870098e-49	-8.615850e-47
Msa1296330	Msa1390210	0.802319	5.934965e-49	-8.615850e-47
Msa1296330	Msa1406720	0.815648	8.301888e-52	-8.615850e-47
Msa1296330	Msa1424590	0.807579	4.719046e-50	-8.615850e-47
Msa1296330	Msa1434640	0.817628	2.987507e-52	-8.615850e-47
Msa1296330	Msa1442260	0.816487	5.393151e-52	-8.615850e-47
Msa1296330	Msa1450190	0.803185	3.932265e-49	-8.615850e-47
Msa1296330	Msa1457840	0.823756	1.167106e-53	-8.615850e-47
Msa0373170	Msa1296330	0.834894	2.301526e-56	-8.615850e-47
Msa0383000	Msa1296330	0.807549	4.788544e-50	-8.615850e-47
Msa0412130	Msa1296330	0.803146	4.005777e-49	-8.615850e-47
Msa0420670	Msa1296330	0.813042	3.127597e-51	-8.615850e-47
Msa0421150	Msa1296330	0.804448	2.149805e-49	-8.615850e-47
Msa0421750	Msa1296330	0.833419	5.391631e-56	-8.615850e-47
Msa0430080	Msa1296330	0.815893	7.318919e-52	-8.615850e-47
Msa0430170	Msa1296330	0.817397	3.368816e-52	-8.615850e-47
Msa0432690	Msa1296330	0.810305	1.231506e-50	-8.615850e-47
Msa0433150	Msa1296330	0.818180	2.242593e-52	-8.615850e-47
Msa0433760	Msa1296330	0.838434	2.881770e-57	-8.615850e-47
Msa0461550	Msa1296330	0.811470	6.890886e-51	-8.615850e-47
Msa0466520	Msa1296330	0.822986	1.765989e-53	-8.615850e-47
Msa0467690	Msa1296330	0.835249	1.873206e-56	-8.615850e-47
Msa0477630	Msa1296330	0.830976	2.167472e-55	-8.615850e-47
Msa0480730	Msa1296330	0.838740	2.402832e-57	-8.615850e-47
Msa1000970	Msa1296330	0.842833	2.031541e-58	-8.615850e-47
Msa1008670	Msa1296330	0.838682	2.487777e-57	-8.615850e-47
Msa1008850	Msa1296330	0.819404	1.182430e-52	-8.615850e-47
Msa1060900	Msa1296330	0.808261	3.377599e-50	-8.615850e-47
Msa1071410	Msa1296330	0.831057	2.071371e-55	-8.615850e-47
Msa1076020	Msa1296330	0.848679	5.255047e-60	-8.615850e-47
Msa1078880	Msa1296330	0.810559	1.085588e-50	-8.615850e-47
Msa1078970	Msa1296330	0.807351	5.274620e-50	-8.615850e-47
Msa1078990	Msa1296330	0.802592	5.213816e-49	-8.615850e-47
Msa1082380	Msa1296330	0.816256	6.072544e-52	-8.615850e-47
Msa1104220	Msa1296330	0.813487	2.496781e-51	-8.615850e-47
Msa1106220	Msa1296330	0.834316	3.215323e-56	-8.615850e-47
Msa0260630	Msa1296330	0.825739	3.977182e-54	-8.615850e-47
Msa0281540	Msa1296330	0.846837	1.690212e-59	-8.615850e-47
Msa0320580	Msa1296330	0.850495	1.636573e-60	-8.615850e-47
Msa0341680	Msa1296330	0.835882	1.295731e-56	-8.615850e-47
Msa0344110	Msa1296330	0.848414	6.224433e-60	-8.615850e-47
Msa1116190	Msa1296330	0.800470	1.419559e-48	-8.615850e-47
Msa1116740	Msa1296330	0.807850	4.131403e-50	-8.615850e-47
Msa1138800	Msa1296330	0.802134	6.478505e-49	-8.615850e-47
Msa1139050	Msa1296330	0.807486	4.936605e-50	-8.615850e-47
Msa1148630	Msa1296330	0.817731	2.831793e-52	-8.615850e-47
Msa1149450	Msa1296330	0.839711	1.345528e-57	-8.615850e-47
Msa1159590	Msa1296330	0.811940	5.445171e-51	-8.615850e-47
Msa1162880	Msa1296330	0.818568	1.831595e-52	-8.615850e-47
Msa1163180	Msa1296330	0.813715	2.224726e-51	-8.615850e-47
Msa1165480	Msa1296330	0.807362	5.244735e-50	-8.615850e-47
Msa1169170	Msa1296330	0.813747	2.188188e-51	-8.615850e-47
Msa1169190	Msa1296330	0.810715	1.004385e-50	-8.615850e-47
Msa1191000	Msa1296330	0.820530	6.532853e-53	-8.615850e-47
Msa1213830	Msa1296330	0.848810	4.834641e-60	-8.615850e-47
Msa1214350	Msa1296330	0.842756	2.129378e-58	-8.615850e-47
Msa1215980	Msa1296330	0.817991	2.473768e-52	-8.615850e-47
Msa1219770	Msa1296330	0.831499	1.612383e-55	-8.615850e-47
Msa0500450	Msa1296330	0.805354	1.390123e-49	-8.615850e-47
Msa0506880	Msa1296330	0.801003	1.105451e-48	-8.615850e-47
Msa0507810	Msa1296330	0.820505	6.621807e-53	-8.615850e-47
Msa0507820	Msa1296330	0.811975	5.349312e-51	-8.615850e-47
Msa0507920	Msa1296330	0.823089	1.670926e-53	-8.615850e-47
Msa0512530	Msa1296330	0.811403	7.123034e-51	-8.615850e-47
Msa0513560	Msa1296330	0.825098	5.639852e-54	-8.615850e-47
Msa0514020	Msa1296330	0.830115	3.521562e-55	-8.615850e-47
Msa0520870	Msa1296330	0.807920	3.993841e-50	-8.615850e-47
Msa0521320	Msa1296330	0.814443	1.536583e-51	-8.615850e-47
Msa0521680	Msa1296330	0.824540	7.636107e-54	-8.615850e-47
Msa0524320	Msa1296330	0.821087	4.864155e-53	-8.615850e-47
Msa0524430	Msa1296330	0.820595	6.311529e-53	-8.615850e-47
Msa0527850	Msa1296330	0.808068	3.713787e-50	-8.615850e-47
Msa0541740	Msa1296330	0.821159	4.681853e-53	-8.615850e-47
Msa0544410	Msa1296330	0.817859	2.649573e-52	-8.615850e-47
Msa0554300	Msa1296330	0.859165	4.994036e-63	-8.615850e-47
Msa0559100	Msa1296330	0.811219	7.808960e-51	-8.615850e-47
Msa0560570	Msa1296330	0.803325	3.678209e-49	-8.615850e-47
Msa0561560	Msa1296330	0.844204	8.735650e-59	-8.615850e-47
Msa0563900	Msa1296330	0.830169	3.415771e-55	-8.615850e-47
Msa0564980	Msa1296330	0.853929	1.726647e-61	-8.615850e-47
Msa0568710	Msa1296330	0.801950	7.067900e-49	-8.615850e-47
Msa0568850	Msa1296330	0.805952	1.040934e-49	-8.615850e-47
Msa0568900	Msa1296330	0.803623	3.191714e-49	-8.615850e-47
Msa0572830	Msa1296330	0.826621	2.453127e-54	-8.615850e-47
Msa0575710	Msa1296330	0.812993	3.205007e-51	-8.615850e-47
Msa0577280	Msa1296330	0.810779	9.726165e-51	-8.615850e-47
Msa0577330	Msa1296330	0.815450	9.185942e-52	-8.615850e-47
Msa0586200	Msa1296330	0.808343	3.245286e-50	-8.615850e-47
Msa0857800	Msa1296330	0.807454	5.015481e-50	-8.615850e-47
Msa0909760	Msa1296330	0.800642	1.309763e-48	-8.615850e-47
Msa0931590	Msa1296330	0.812266	4.623125e-51	-8.615850e-47
Msa0966710	Msa1296330	0.834535	2.833150e-56	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1296330	MtrunA17_Chr4g0053001	97.281	331	8	1	1	330	1	331	0.0	667
Msa1296330	MtrunA17_Chr6g0483441	49.693	326	124	8	12	329	1	294	1.41e-94	282
Msa1296330	MtrunA17_Chr8g0392551	51.258	318	133	5	12	329	1	296	1.40e-91	275
Msa1296330	MtrunA17_Chr2g0331671	42.320	319	168	11	14	329	4	309	3.07e-70	221
Msa1296330	MtrunA17_Chr4g0038691	43.769	329	162	10	10	329	4	318	1.30e-67	214
Msa1296330	MtrunA17_Chr6g0486001	40.615	325	169	9	12	330	1	307	2.15e-58	190
Msa1296330	MtrunA17_Chr3g0091821	56.051	157	63	3	171	326	39	190	3.54e-48	160
Msa1296330	MtrunA17_Chr3g0090061	26.471	306	187	11	39	311	29	329	4.17e-19	86.7
Msa1296330	MtrunA17_Chr8g0379281	46.154	91	40	1	146	236	105	186	5.37e-18	81.3

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1296330	AT1G45688.1	52.174	345	129	8	12	327	1	338	4.68e-99	296
Msa1296330	AT5G42860.1	49.258	337	129	7	12	327	1	316	1.84e-94	283
Msa1296330	AT1G45688.2	50.199	251	94	7	12	244	1	238	1.51e-73	228
Msa1296330	AT2G41990.1	38.486	317	171	7	12	326	1	295	1.58e-50	170
Msa1296330	AT4G35170.1	35.714	308	176	7	25	327	7	297	4.62e-49	166
Msa1296330	AT3G24600.1	32.812	320	187	7	12	325	2	299	3.03e-37	135
Msa1296330	AT3G24605.1	30.921	304	185	8	10	311	1	281	4.29e-36	132
Msa1296330	AT3G08490.1	24.057	212	154	4	121	326	57	267	7.58e-18	82.4

Find 95 sgRNAs with CRISPR-Local

Find 278 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TTGAAGTGGGCTTGAGTTAA+AGG	0.197154	8_3:+55628271	None:intergenic
AGAGTTATTGTTAGTGTAAT+TGG	0.210630	8_3:+55628505	None:intergenic
CAAAATCAAAATTACACTTT+TGG	0.229042	8_3:+55626666	None:intergenic
GTTCTATTTCAACTTTAAAT+AGG	0.230711	8_3:-55626637	Msa1296330:three_prime_UTR
ACCATTGACATTGAATATTA+TGG	0.231681	8_3:-55627008	Msa1296330:CDS
GCCAATTACCTTTCCTGTTA+TGG	0.240601	8_3:+55628138	None:intergenic
AGGTCAAAAGCTTATGTATT+AGG	0.241379	8_3:-55626983	Msa1296330:CDS
TAATTTATGTAGTAATTTAA+AGG	0.265793	8_3:-55626799	Msa1296330:three_prime_UTR
CCAATTACCTTTCCTGTTAT+GGG	0.301565	8_3:+55628139	None:intergenic
AATTTATGTAGTAATTTAAA+GGG	0.302845	8_3:-55626798	Msa1296330:three_prime_UTR
TCTATTAAAGTGATGGTAAA+AGG	0.303644	8_3:-55627100	Msa1296330:CDS
GGAAGTCATATTCCACTATA+TGG	0.304021	8_3:-55627079	Msa1296330:CDS
AATTGAGTGTGCATTGATTA+TGG	0.311781	8_3:-55626930	Msa1296330:CDS
CCCATAACAGGAAAGGTAAT+TGG	0.338006	8_3:-55628139	Msa1296330:CDS
GGTCAAAAGCTTATGTATTA+GGG	0.353077	8_3:-55626982	Msa1296330:CDS
GCAGTCAAGCTTCCCATAAC+AGG	0.360744	8_3:-55628151	Msa1296330:CDS
ATCTGCATAGCGTAAGTGTT+GGG	0.373743	8_3:+55628569	None:intergenic
TGGTAATAATTGAGATCTAA+TGG	0.385611	8_3:+55627264	None:intergenic
GGCTAACATTGTAATGTTGT+TGG	0.400142	8_3:+55628424	None:intergenic
TTGTTGATGAAGTTTGAGTT+TGG	0.400789	8_3:+55628465	None:intergenic
TCTTGTTACACGAAATTTGA+AGG	0.402754	8_3:-55626696	Msa1296330:three_prime_UTR
TACCAACTTACACTAGCAAC+TGG	0.405417	8_3:-55627246	Msa1296330:CDS
GTCAATGGTACCGGTTCAAC+CGG	0.412848	8_3:+55627022	None:intergenic
CAATGGTTCACCGGTTGAAC+CGG	0.415899	8_3:-55627032	Msa1296330:CDS
AAGAAGCCCTTCTTCTTCAA+TGG	0.421198	8_3:+55628091	None:intergenic
CACTTGTTGGTAAGTCGAAT+AGG	0.431111	8_3:+55626887	None:intergenic
TCTCATTCCAACTCATCGTT+GGG	0.432926	8_3:-55628224	Msa1296330:CDS
AGCTTATGTATTAGGGGCAT+TGG	0.433647	8_3:-55626975	Msa1296330:CDS
GGAAAGGTAATTGGCGTCCT+TGG	0.434224	8_3:-55628130	Msa1296330:CDS
TTTCTTGATTGATAAAACTT+AGG	0.441416	8_3:+55627133	None:intergenic
GCAGGAAAATAGCATCTCCT+AGG	0.445069	8_3:+55628038	None:intergenic
CAAGCGGGTGCGGATTTGTC+AGG	0.450101	8_3:-55627378	Msa1296330:CDS
TTCTCATTCCAACTCATCGT+TGG	0.452096	8_3:-55628225	Msa1296330:CDS
TAACTCATACGTACACTTGT+TGG	0.455029	8_3:+55626874	None:intergenic
TTGTCGGTGAGGATTGTGTT+AGG	0.463501	8_3:+55628378	None:intergenic
TCATTTATTACTTCCACGTA+TGG	0.474436	8_3:+55626837	None:intergenic
GCTTACCTCGGAGTCTGTCT+TGG	0.474995	8_3:+55628403	None:intergenic
TTTAATGCCATTGAAGAAGA+AGG	0.476425	8_3:-55628098	Msa1296330:CDS
AGCCCACTTCAAAGCCCGTT+GGG	0.480036	8_3:-55628260	Msa1296330:CDS
AAGAAACAAACAACAAAAGC+AGG	0.480722	8_3:+55628020	None:intergenic
ATTTATTATTCAAGCGGGTG+CGG	0.511779	8_3:-55627388	Msa1296330:CDS
AATGAGGAGGAGATCCCAAC+GGG	0.512593	8_3:+55628246	None:intergenic
TTCCAGTTGCTAGTGTAAGT+TGG	0.513143	8_3:+55627244	None:intergenic
ACCATAATATTCAATGTCAA+TGG	0.513438	8_3:+55627007	None:intergenic
GAGGAAGATTCACGTGAATG+TGG	0.516881	8_3:+55628200	None:intergenic
CGTAAGTGTTGGGGCATGCA+AGG	0.518852	8_3:+55628579	None:intergenic
AGGTAATTGGCGTCCTTGGA+AGG	0.521480	8_3:-55628126	Msa1296330:CDS
TTAATGCCATTGAAGAAGAA+GGG	0.527012	8_3:-55628097	Msa1296330:CDS
GCAAGATTGAACACTATCAA+TGG	0.537446	8_3:-55627049	Msa1296330:CDS
ATATTCAATGTCAATGGTAC+CGG	0.541625	8_3:+55627013	None:intergenic
TAACATTGTAATGTTGTTGG+TGG	0.542071	8_3:+55628427	None:intergenic
GAACACTATCAATGGTTCAC+CGG	0.546796	8_3:-55627041	Msa1296330:CDS
TCAAAGATCTATTAAAGTGA+TGG	0.547641	8_3:-55627107	Msa1296330:CDS
ATGCAGATCGTGGATTCCCT+AGG	0.552676	8_3:-55628055	Msa1296330:CDS
GTCAGGAGTTGCCACTAGCA+TGG	0.553632	8_3:-55627361	Msa1296330:CDS
ATCCCAACGGGCTTTGAAGT+GGG	0.555397	8_3:+55628258	None:intergenic
GATCCCAACGGGCTTTGAAG+TGG	0.558461	8_3:+55628257	None:intergenic
AGCCCATCACGTGATCTTGT+CGG	0.561235	8_3:+55628362	None:intergenic
GTCATATTCCACTATATGGA+GGG	0.565203	8_3:-55627075	Msa1296330:CDS
TTGTGTTAGGCTGCTTACCT+CGG	0.565391	8_3:+55628391	None:intergenic
AAGCCCACTTCAAAGCCCGT+TGG	0.565440	8_3:-55628261	Msa1296330:CDS
GATAGATTTATTATTCAAGC+GGG	0.571128	8_3:-55627393	Msa1296330:CDS
GATGAGTTGGAATGAGAATG+AGG	0.578944	8_3:+55628230	None:intergenic
AATCTGCATAGCGTAAGTGT+TGG	0.579164	8_3:+55628568	None:intergenic
CAGGAAAATAGCATCTCCTA+GGG	0.584033	8_3:+55628039	None:intergenic
CTAATGGAGTTGATGCAACA+TGG	0.586151	8_3:+55627280	None:intergenic
CGTTGGAAGAGTCACGTGAT+GGG	0.586920	8_3:+55628315	None:intergenic
ATTTATGTAGTAATTTAAAG+GGG	0.587629	8_3:-55626797	Msa1296330:three_prime_UTR
TCGTTGGAAGAGTCACGTGA+TGG	0.590631	8_3:+55628314	None:intergenic
TGATAGATTTATTATTCAAG+CGG	0.596406	8_3:-55627394	Msa1296330:CDS
CACCGACAAGATCACGTGAT+GGG	0.601025	8_3:-55628364	Msa1296330:CDS
TCATATTCCACTATATGGAG+GGG	0.602380	8_3:-55627074	Msa1296330:CDS
CAAGCTTCCCATAACAGGAA+AGG	0.602700	8_3:-55628146	Msa1296330:CDS
ATGTGGGCCCAACGATGAGT+TGG	0.610898	8_3:+55628217	None:intergenic
CATATTCCACTATATGGAGG+GGG	0.611721	8_3:-55627073	Msa1296330:CDS
GCATTAAACTGATCCTTCCA+AGG	0.614580	8_3:+55628113	None:intergenic
TCTGCATAGCGTAAGTGTTG+GGG	0.616021	8_3:+55628570	None:intergenic
AGTCATATTCCACTATATGG+AGG	0.618199	8_3:-55627076	Msa1296330:CDS
ATTCATGGACACCATGCTAG+TGG	0.619012	8_3:+55627350	None:intergenic
TGACATTGAATATTATGGTG+AGG	0.620220	8_3:-55627003	Msa1296330:CDS
ATCACGTGATCTTGTCGGTG+AGG	0.634015	8_3:+55628367	None:intergenic
AGGAAGATTCACGTGAATGT+GGG	0.636052	8_3:+55628201	None:intergenic
GTCAAAAGCTTATGTATTAG+GGG	0.642134	8_3:-55626981	Msa1296330:CDS
GATGATGATGATGCAGATCG+TGG	0.642710	8_3:-55628065	Msa1296330:CDS
AGCTTGACTGCTCTTACGTG+AGG	0.648575	8_3:+55628163	None:intergenic
TCACCGACAAGATCACGTGA+TGG	0.649203	8_3:-55628365	Msa1296330:CDS
TATCATGTTTGATGAGTGAG+TGG	0.654886	8_3:+55628536	None:intergenic
GAATGAGGAGGAGATCCCAA+CGG	0.666085	8_3:+55628245	None:intergenic
GGGCATGCAAGGACAGCTAG+TGG	0.666634	8_3:+55628590	None:intergenic
TCACGTGACTCTTCCAACGA+CGG	0.683036	8_3:-55628311	Msa1296330:CDS
GAGTTGGAATGAGAATGAGG+AGG	0.698188	8_3:+55628233	None:intergenic
AGACTCGATCATACCATACG+TGG	0.703910	8_3:-55626850	Msa1296330:three_prime_UTR
ACGTGAGGCAGAGTATCTCG+TGG	0.711321	8_3:+55628178	None:intergenic
TGAGGCAGAGTATCTCGTGG+AGG	0.725109	8_3:+55628181	None:intergenic
GTTAGCCAAGACAGACTCCG+AGG	0.733209	8_3:-55628408	Msa1296330:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TAATCATGTATTATATTATA+TGG	-	chr8_3:55628068-55628087	Msa1296330:CDS	10.0%
!!	TAATTTATGTAGTAATTTAA+AGG	-	chr8_3:55628445-55628464	Msa1296330:CDS	10.0%
!!	AATTTATGTAGTAATTTAAA+GGG	-	chr8_3:55628446-55628465	Msa1296330:CDS	10.0%
!!	TAATCATGTATTATATTATA+TGG	-	chr8_3:55628068-55628087	Msa1296330:CDS	10.0%
!!	TAATTTATGTAGTAATTTAA+AGG	-	chr8_3:55628445-55628464	Msa1296330:CDS	10.0%
!!	AATTTATGTAGTAATTTAAA+GGG	-	chr8_3:55628446-55628465	Msa1296330:CDS	10.0%
!!	ATTGAAAAATCAACATTATA+TGG	+	chr8_3:55627755-55627774	None:intergenic	15.0%
!!	ATTTATGTAGTAATTTAAAG+GGG	-	chr8_3:55628447-55628466	Msa1296330:exon	15.0%
!!!	AAAATCAAAATTACACTTTT+GGG	+	chr8_3:55628580-55628599	None:intergenic	15.0%
!!	ATTGAAAAATCAACATTATA+TGG	+	chr8_3:55627755-55627774	None:intergenic	15.0%
!!	ATTTATGTAGTAATTTAAAG+GGG	-	chr8_3:55628447-55628466	Msa1296330:exon	15.0%
!!!	AAAATCAAAATTACACTTTT+GGG	+	chr8_3:55628580-55628599	None:intergenic	15.0%
!!!	CTTTTATTTGAATGCATATT+TGG	+	chr8_3:55627596-55627615	None:intergenic	20.0%
!!!	TTTTAATTATAGTCACAATG+TGG	+	chr8_3:55627673-55627692	None:intergenic	20.0%
!!	TGATAGATTTATTATTCAAG+CGG	-	chr8_3:55627850-55627869	Msa1296330:intron	20.0%
!!	TTTCTTGATTGATAAAACTT+AGG	+	chr8_3:55628114-55628133	None:intergenic	20.0%
!!!	CAAAATCAAAATTACACTTT+TGG	+	chr8_3:55628581-55628600	None:intergenic	20.0%
!!!	AAGTGTAATTTTGATTTTGT+CGG	-	chr8_3:55628582-55628601	Msa1296330:five_prime_UTR	20.0%
!!	GTTCTATTTCAACTTTAAAT+AGG	-	chr8_3:55628607-55628626	Msa1296330:five_prime_UTR	20.0%
!!!	CTTTTATTTGAATGCATATT+TGG	+	chr8_3:55627596-55627615	None:intergenic	20.0%
!!!	TTTTAATTATAGTCACAATG+TGG	+	chr8_3:55627673-55627692	None:intergenic	20.0%
!!	TGATAGATTTATTATTCAAG+CGG	-	chr8_3:55627850-55627869	Msa1296330:intron	20.0%
!!	TTTCTTGATTGATAAAACTT+AGG	+	chr8_3:55628114-55628133	None:intergenic	20.0%
!!!	CAAAATCAAAATTACACTTT+TGG	+	chr8_3:55628581-55628600	None:intergenic	20.0%
!!!	AAGTGTAATTTTGATTTTGT+CGG	-	chr8_3:55628582-55628601	Msa1296330:five_prime_UTR	20.0%
!!	GTTCTATTTCAACTTTAAAT+AGG	-	chr8_3:55628607-55628626	Msa1296330:five_prime_UTR	20.0%
!	AGAGTTATTGTTAGTGTAAT+TGG	+	chr8_3:55626742-55626761	None:intergenic	25.0%
!	TACACTGAAATTAGAAATGA+TGG	+	chr8_3:55627331-55627350	None:intergenic	25.0%
!	ATCATTTCTAATTTCAGTGT+AGG	-	chr8_3:55627330-55627349	Msa1296330:CDS	25.0%
!	TTTAGATTCACAAAATGACA+TGG	-	chr8_3:55627365-55627384	Msa1296330:CDS	25.0%
!	AGATAAATCTGTATTTGAAG+TGG	-	chr8_3:55627692-55627711	Msa1296330:intron	25.0%
!!	GATAAATCTGTATTTGAAGT+GGG	-	chr8_3:55627693-55627712	Msa1296330:intron	25.0%
!	TAGTAATGCATTTAATACCA+TGG	-	chr8_3:55627725-55627744	Msa1296330:intron	25.0%
!!!	TTGTTTTGTGTATGTATGTT+TGG	-	chr8_3:55627813-55627832	Msa1296330:intron	25.0%
!	GATAGATTTATTATTCAAGC+GGG	-	chr8_3:55627851-55627870	Msa1296330:intron	25.0%
!	TGGTAATAATTGAGATCTAA+TGG	+	chr8_3:55627983-55628002	None:intergenic	25.0%
!	TCAAAGATCTATTAAAGTGA+TGG	-	chr8_3:55628137-55628156	Msa1296330:CDS	25.0%
!	TCTATTAAAGTGATGGTAAA+AGG	-	chr8_3:55628144-55628163	Msa1296330:CDS	25.0%
!	ACCATTGACATTGAATATTA+TGG	-	chr8_3:55628236-55628255	Msa1296330:CDS	25.0%
!	ACCATAATATTCAATGTCAA+TGG	+	chr8_3:55628240-55628259	None:intergenic	25.0%
!!	TCAATTTTCTTGTTGAATCT+TGG	+	chr8_3:55628300-55628319	None:intergenic	25.0%
!	AGAGTTATTGTTAGTGTAAT+TGG	+	chr8_3:55626742-55626761	None:intergenic	25.0%
!	TACACTGAAATTAGAAATGA+TGG	+	chr8_3:55627331-55627350	None:intergenic	25.0%
!	ATCATTTCTAATTTCAGTGT+AGG	-	chr8_3:55627330-55627349	Msa1296330:CDS	25.0%
!	TTTAGATTCACAAAATGACA+TGG	-	chr8_3:55627365-55627384	Msa1296330:CDS	25.0%
!	AGATAAATCTGTATTTGAAG+TGG	-	chr8_3:55627692-55627711	Msa1296330:intron	25.0%
!!	GATAAATCTGTATTTGAAGT+GGG	-	chr8_3:55627693-55627712	Msa1296330:intron	25.0%
!	TAGTAATGCATTTAATACCA+TGG	-	chr8_3:55627725-55627744	Msa1296330:intron	25.0%
!!!	TTGTTTTGTGTATGTATGTT+TGG	-	chr8_3:55627813-55627832	Msa1296330:intron	25.0%
!	GATAGATTTATTATTCAAGC+GGG	-	chr8_3:55627851-55627870	Msa1296330:intron	25.0%
!	TGGTAATAATTGAGATCTAA+TGG	+	chr8_3:55627983-55628002	None:intergenic	25.0%
!	TCAAAGATCTATTAAAGTGA+TGG	-	chr8_3:55628137-55628156	Msa1296330:CDS	25.0%
!	TCTATTAAAGTGATGGTAAA+AGG	-	chr8_3:55628144-55628163	Msa1296330:CDS	25.0%
!	ACCATTGACATTGAATATTA+TGG	-	chr8_3:55628236-55628255	Msa1296330:CDS	25.0%
!	ACCATAATATTCAATGTCAA+TGG	+	chr8_3:55628240-55628259	None:intergenic	25.0%
!!	TCAATTTTCTTGTTGAATCT+TGG	+	chr8_3:55628300-55628319	None:intergenic	25.0%
!	TTGTTGATGAAGTTTGAGTT+TGG	+	chr8_3:55626782-55626801	None:intergenic	30.0%
	TAACATTGTAATGTTGTTGG+TGG	+	chr8_3:55626820-55626839	None:intergenic	30.0%
	TTTAATGCCATTGAAGAAGA+AGG	-	chr8_3:55627146-55627165	Msa1296330:intron	30.0%
	TTAATGCCATTGAAGAAGAA+GGG	-	chr8_3:55627147-55627166	Msa1296330:intron	30.0%
	AAGAAACAAACAACAAAAGC+AGG	+	chr8_3:55627227-55627246	None:intergenic	30.0%
!	TGTTTTCTCTCTCATTCTTT+GGG	-	chr8_3:55627259-55627278	Msa1296330:CDS	30.0%
	GAGAAATACCTTGAGAAAAA+TGG	+	chr8_3:55627309-55627328	None:intergenic	30.0%
!!	AAGTTGTCACACTTGTTATT+TGG	-	chr8_3:55627613-55627632	Msa1296330:intron	30.0%
	CAACATTATATGGAAAACCA+TGG	+	chr8_3:55627745-55627764	None:intergenic	30.0%
!!!	TCTAAATGTCATTTTCACAG+TGG	+	chr8_3:55627921-55627940	None:intergenic	30.0%
!!!	AGAAACACTGCAACATTTTT+TGG	-	chr8_3:55627938-55627957	Msa1296330:intron	30.0%
!!!	GAAACACTGCAACATTTTTT+GGG	-	chr8_3:55627939-55627958	Msa1296330:intron	30.0%
!!!	AAACACTGCAACATTTTTTG+GGG	-	chr8_3:55627940-55627959	Msa1296330:intron	30.0%
	ATATTCAATGTCAATGGTAC+CGG	+	chr8_3:55628234-55628253	None:intergenic	30.0%
	TGACATTGAATATTATGGTG+AGG	-	chr8_3:55628241-55628260	Msa1296330:CDS	30.0%
	AGGTCAAAAGCTTATGTATT+AGG	-	chr8_3:55628261-55628280	Msa1296330:CDS	30.0%
	GGTCAAAAGCTTATGTATTA+GGG	-	chr8_3:55628262-55628281	Msa1296330:CDS	30.0%
	GTCAAAAGCTTATGTATTAG+GGG	-	chr8_3:55628263-55628282	Msa1296330:CDS	30.0%
!!	AATTGAGTGTGCATTGATTA+TGG	-	chr8_3:55628314-55628333	Msa1296330:CDS	30.0%
!	ATAGGCTTACTCATTTTCTT+CGG	+	chr8_3:55628342-55628361	None:intergenic	30.0%
	TCATTTATTACTTCCACGTA+TGG	+	chr8_3:55628410-55628429	None:intergenic	30.0%
	TCTTGTTACACGAAATTTGA+AGG	-	chr8_3:55628548-55628567	Msa1296330:five_prime_UTR	30.0%
!!!	TGTAATTTTGATTTTGTCGG+TGG	-	chr8_3:55628585-55628604	Msa1296330:five_prime_UTR	30.0%
!	TTGTTGATGAAGTTTGAGTT+TGG	+	chr8_3:55626782-55626801	None:intergenic	30.0%
	TAACATTGTAATGTTGTTGG+TGG	+	chr8_3:55626820-55626839	None:intergenic	30.0%
	TTTAATGCCATTGAAGAAGA+AGG	-	chr8_3:55627146-55627165	Msa1296330:intron	30.0%
	TTAATGCCATTGAAGAAGAA+GGG	-	chr8_3:55627147-55627166	Msa1296330:intron	30.0%
	AAGAAACAAACAACAAAAGC+AGG	+	chr8_3:55627227-55627246	None:intergenic	30.0%
!	TGTTTTCTCTCTCATTCTTT+GGG	-	chr8_3:55627259-55627278	Msa1296330:CDS	30.0%
	GAGAAATACCTTGAGAAAAA+TGG	+	chr8_3:55627309-55627328	None:intergenic	30.0%
!!	AAGTTGTCACACTTGTTATT+TGG	-	chr8_3:55627613-55627632	Msa1296330:intron	30.0%
	CAACATTATATGGAAAACCA+TGG	+	chr8_3:55627745-55627764	None:intergenic	30.0%
!!!	TCTAAATGTCATTTTCACAG+TGG	+	chr8_3:55627921-55627940	None:intergenic	30.0%
!!!	AGAAACACTGCAACATTTTT+TGG	-	chr8_3:55627938-55627957	Msa1296330:intron	30.0%
!!!	GAAACACTGCAACATTTTTT+GGG	-	chr8_3:55627939-55627958	Msa1296330:intron	30.0%
!!!	AAACACTGCAACATTTTTTG+GGG	-	chr8_3:55627940-55627959	Msa1296330:intron	30.0%
	ATATTCAATGTCAATGGTAC+CGG	+	chr8_3:55628234-55628253	None:intergenic	30.0%
	TGACATTGAATATTATGGTG+AGG	-	chr8_3:55628241-55628260	Msa1296330:CDS	30.0%
	AGGTCAAAAGCTTATGTATT+AGG	-	chr8_3:55628261-55628280	Msa1296330:CDS	30.0%
	GGTCAAAAGCTTATGTATTA+GGG	-	chr8_3:55628262-55628281	Msa1296330:CDS	30.0%
	GTCAAAAGCTTATGTATTAG+GGG	-	chr8_3:55628263-55628282	Msa1296330:CDS	30.0%
!!	AATTGAGTGTGCATTGATTA+TGG	-	chr8_3:55628314-55628333	Msa1296330:CDS	30.0%
!	ATAGGCTTACTCATTTTCTT+CGG	+	chr8_3:55628342-55628361	None:intergenic	30.0%
	TCATTTATTACTTCCACGTA+TGG	+	chr8_3:55628410-55628429	None:intergenic	30.0%
	TCTTGTTACACGAAATTTGA+AGG	-	chr8_3:55628548-55628567	Msa1296330:five_prime_UTR	30.0%
!!!	TGTAATTTTGATTTTGTCGG+TGG	-	chr8_3:55628585-55628604	Msa1296330:five_prime_UTR	30.0%
	TATCATGTTTGATGAGTGAG+TGG	+	chr8_3:55626711-55626730	None:intergenic	35.0%
	GGCTAACATTGTAATGTTGT+TGG	+	chr8_3:55626823-55626842	None:intergenic	35.0%
	CCAATTACCTTTCCTGTTAT+GGG	+	chr8_3:55627108-55627127	None:intergenic	35.0%
!	CTGTTTTCTCTCTCATTCTT+TGG	-	chr8_3:55627258-55627277	Msa1296330:CDS	35.0%
!	GAAAAATGGCAGGTTTTTGA+GGG	+	chr8_3:55627295-55627314	None:intergenic	35.0%
!	AGAAAAATGGCAGGTTTTTG+AGG	+	chr8_3:55627296-55627315	None:intergenic	35.0%
!!!	AAAACCTGCCATTTTTCTCA+AGG	-	chr8_3:55627298-55627317	Msa1296330:CDS	35.0%
	AATACCTTGAGAAAAATGGC+AGG	+	chr8_3:55627305-55627324	None:intergenic	35.0%
	GAATTGACAGTAATGAAGCA+CGG	+	chr8_3:55627574-55627593	None:intergenic	35.0%
	ATTTATTATTCAAGCGGGTG+CGG	-	chr8_3:55627856-55627875	Msa1296330:intron	35.0%
!	CATTTTCACAGTGGAATTCA+TGG	+	chr8_3:55627912-55627931	None:intergenic	35.0%
	GGAAGTCATATTCCACTATA+TGG	-	chr8_3:55628165-55628184	Msa1296330:CDS	35.0%
	AGTCATATTCCACTATATGG+AGG	-	chr8_3:55628168-55628187	Msa1296330:CDS	35.0%
	GTCATATTCCACTATATGGA+GGG	-	chr8_3:55628169-55628188	Msa1296330:CDS	35.0%
	TCATATTCCACTATATGGAG+GGG	-	chr8_3:55628170-55628189	Msa1296330:CDS	35.0%
	GCAAGATTGAACACTATCAA+TGG	-	chr8_3:55628195-55628214	Msa1296330:CDS	35.0%
	TAACTCATACGTACACTTGT+TGG	+	chr8_3:55628373-55628392	None:intergenic	35.0%
!	ATTCGCACATGAGTTTTCTT+TGG	-	chr8_3:55628495-55628514	Msa1296330:five_prime_UTR	35.0%
	TATCATGTTTGATGAGTGAG+TGG	+	chr8_3:55626711-55626730	None:intergenic	35.0%
	GGCTAACATTGTAATGTTGT+TGG	+	chr8_3:55626823-55626842	None:intergenic	35.0%
	CCAATTACCTTTCCTGTTAT+GGG	+	chr8_3:55627108-55627127	None:intergenic	35.0%
!	CTGTTTTCTCTCTCATTCTT+TGG	-	chr8_3:55627258-55627277	Msa1296330:CDS	35.0%
!	GAAAAATGGCAGGTTTTTGA+GGG	+	chr8_3:55627295-55627314	None:intergenic	35.0%
!	AGAAAAATGGCAGGTTTTTG+AGG	+	chr8_3:55627296-55627315	None:intergenic	35.0%
!!!	AAAACCTGCCATTTTTCTCA+AGG	-	chr8_3:55627298-55627317	Msa1296330:CDS	35.0%
	AATACCTTGAGAAAAATGGC+AGG	+	chr8_3:55627305-55627324	None:intergenic	35.0%
	GAATTGACAGTAATGAAGCA+CGG	+	chr8_3:55627574-55627593	None:intergenic	35.0%
	ATTTATTATTCAAGCGGGTG+CGG	-	chr8_3:55627856-55627875	Msa1296330:intron	35.0%
!	CATTTTCACAGTGGAATTCA+TGG	+	chr8_3:55627912-55627931	None:intergenic	35.0%
	GGAAGTCATATTCCACTATA+TGG	-	chr8_3:55628165-55628184	Msa1296330:CDS	35.0%
	AGTCATATTCCACTATATGG+AGG	-	chr8_3:55628168-55628187	Msa1296330:CDS	35.0%
	GTCATATTCCACTATATGGA+GGG	-	chr8_3:55628169-55628188	Msa1296330:CDS	35.0%
	TCATATTCCACTATATGGAG+GGG	-	chr8_3:55628170-55628189	Msa1296330:CDS	35.0%
	GCAAGATTGAACACTATCAA+TGG	-	chr8_3:55628195-55628214	Msa1296330:CDS	35.0%
	TAACTCATACGTACACTTGT+TGG	+	chr8_3:55628373-55628392	None:intergenic	35.0%
!	ATTCGCACATGAGTTTTCTT+TGG	-	chr8_3:55628495-55628514	Msa1296330:five_prime_UTR	35.0%
	ATCTGCATAGCGTAAGTGTT+GGG	+	chr8_3:55626678-55626697	None:intergenic	40.0%
	AATCTGCATAGCGTAAGTGT+TGG	+	chr8_3:55626679-55626698	None:intergenic	40.0%
!!!	ATGTTGTTGGTGGTGTTTTC+TGG	+	chr8_3:55626810-55626829	None:intergenic	40.0%
!	TTGAAGTGGGCTTGAGTTAA+AGG	+	chr8_3:55626976-55626995	None:intergenic	40.0%
!	GATGAGTTGGAATGAGAATG+AGG	+	chr8_3:55627017-55627036	None:intergenic	40.0%
	TTCTCATTCCAACTCATCGT+TGG	-	chr8_3:55627019-55627038	Msa1296330:CDS	40.0%
	TCTCATTCCAACTCATCGTT+GGG	-	chr8_3:55627020-55627039	Msa1296330:CDS	40.0%
	AGGAAGATTCACGTGAATGT+GGG	+	chr8_3:55627046-55627065	None:intergenic	40.0%
	CCCATAACAGGAAAGGTAAT+TGG	-	chr8_3:55627105-55627124	Msa1296330:CDS	40.0%
	GCCAATTACCTTTCCTGTTA+TGG	+	chr8_3:55627109-55627128	None:intergenic	40.0%
	GCATTAAACTGATCCTTCCA+AGG	+	chr8_3:55627134-55627153	None:intergenic	40.0%
	AAGAAGCCCTTCTTCTTCAA+TGG	+	chr8_3:55627156-55627175	None:intergenic	40.0%
	CAGGAAAATAGCATCTCCTA+GGG	+	chr8_3:55627208-55627227	None:intergenic	40.0%
	ATTATCTGACATAGACACCC+CGG	+	chr8_3:55627473-55627492	None:intergenic	40.0%
!!	CTAATGGAGTTGATGCAACA+TGG	+	chr8_3:55627967-55627986	None:intergenic	40.0%
	TACCAACTTACACTAGCAAC+TGG	-	chr8_3:55627998-55628017	Msa1296330:CDS	40.0%
	TTCCAGTTGCTAGTGTAAGT+TGG	+	chr8_3:55628003-55628022	None:intergenic	40.0%
	CATATTCCACTATATGGAGG+GGG	-	chr8_3:55628171-55628190	Msa1296330:CDS	40.0%
	GAACACTATCAATGGTTCAC+CGG	-	chr8_3:55628203-55628222	Msa1296330:CDS	40.0%
!	AGCTTATGTATTAGGGGCAT+TGG	-	chr8_3:55628269-55628288	Msa1296330:CDS	40.0%
!	CACTTGTTGGTAAGTCGAAT+AGG	+	chr8_3:55628360-55628379	None:intergenic	40.0%
	ATCTGCATAGCGTAAGTGTT+GGG	+	chr8_3:55626678-55626697	None:intergenic	40.0%
	AATCTGCATAGCGTAAGTGT+TGG	+	chr8_3:55626679-55626698	None:intergenic	40.0%
!!!	ATGTTGTTGGTGGTGTTTTC+TGG	+	chr8_3:55626810-55626829	None:intergenic	40.0%
!	TTGAAGTGGGCTTGAGTTAA+AGG	+	chr8_3:55626976-55626995	None:intergenic	40.0%
!	GATGAGTTGGAATGAGAATG+AGG	+	chr8_3:55627017-55627036	None:intergenic	40.0%
	TTCTCATTCCAACTCATCGT+TGG	-	chr8_3:55627019-55627038	Msa1296330:CDS	40.0%
	TCTCATTCCAACTCATCGTT+GGG	-	chr8_3:55627020-55627039	Msa1296330:CDS	40.0%
	AGGAAGATTCACGTGAATGT+GGG	+	chr8_3:55627046-55627065	None:intergenic	40.0%
	CCCATAACAGGAAAGGTAAT+TGG	-	chr8_3:55627105-55627124	Msa1296330:CDS	40.0%
	GCCAATTACCTTTCCTGTTA+TGG	+	chr8_3:55627109-55627128	None:intergenic	40.0%
	GCATTAAACTGATCCTTCCA+AGG	+	chr8_3:55627134-55627153	None:intergenic	40.0%
	AAGAAGCCCTTCTTCTTCAA+TGG	+	chr8_3:55627156-55627175	None:intergenic	40.0%
	CAGGAAAATAGCATCTCCTA+GGG	+	chr8_3:55627208-55627227	None:intergenic	40.0%
	ATTATCTGACATAGACACCC+CGG	+	chr8_3:55627473-55627492	None:intergenic	40.0%
!!	CTAATGGAGTTGATGCAACA+TGG	+	chr8_3:55627967-55627986	None:intergenic	40.0%
	TACCAACTTACACTAGCAAC+TGG	-	chr8_3:55627998-55628017	Msa1296330:CDS	40.0%
	TTCCAGTTGCTAGTGTAAGT+TGG	+	chr8_3:55628003-55628022	None:intergenic	40.0%
	CATATTCCACTATATGGAGG+GGG	-	chr8_3:55628171-55628190	Msa1296330:CDS	40.0%
	GAACACTATCAATGGTTCAC+CGG	-	chr8_3:55628203-55628222	Msa1296330:CDS	40.0%
!	AGCTTATGTATTAGGGGCAT+TGG	-	chr8_3:55628269-55628288	Msa1296330:CDS	40.0%
!	CACTTGTTGGTAAGTCGAAT+AGG	+	chr8_3:55628360-55628379	None:intergenic	40.0%
!	TCTGCATAGCGTAAGTGTTG+GGG	+	chr8_3:55626677-55626696	None:intergenic	45.0%
	TTGTGTTAGGCTGCTTACCT+CGG	+	chr8_3:55626856-55626875	None:intergenic	45.0%
	TTGTCGGTGAGGATTGTGTT+AGG	+	chr8_3:55626869-55626888	None:intergenic	45.0%
!!!	TGTTGTTTTCTCACCGTCGT+TGG	+	chr8_3:55626949-55626968	None:intergenic	45.0%
	GAGTTGGAATGAGAATGAGG+AGG	+	chr8_3:55627014-55627033	None:intergenic	45.0%
	GAGGAAGATTCACGTGAATG+TGG	+	chr8_3:55627047-55627066	None:intergenic	45.0%
	CAAGCTTCCCATAACAGGAA+AGG	-	chr8_3:55627098-55627117	Msa1296330:CDS	45.0%
!	GATGATGATGATGCAGATCG+TGG	-	chr8_3:55627179-55627198	Msa1296330:intron	45.0%
	GCAGGAAAATAGCATCTCCT+AGG	+	chr8_3:55627209-55627228	None:intergenic	45.0%
	CACCATCAATCTCTTTGTCC+CGG	-	chr8_3:55627451-55627470	Msa1296330:intron	45.0%
	ACCATCAATCTCTTTGTCCC+GGG	-	chr8_3:55627452-55627471	Msa1296330:intron	45.0%
	TTATCTGACATAGACACCCC+GGG	+	chr8_3:55627472-55627491	None:intergenic	45.0%
	CAGTAATGAAGCACGGACAT+CGG	+	chr8_3:55627567-55627586	None:intergenic	45.0%
	ATTCATGGACACCATGCTAG+TGG	+	chr8_3:55627897-55627916	None:intergenic	45.0%
	AGACTCGATCATACCATACG+TGG	-	chr8_3:55628394-55628413	Msa1296330:CDS	45.0%
!	TCTGCATAGCGTAAGTGTTG+GGG	+	chr8_3:55626677-55626696	None:intergenic	45.0%
	TTGTGTTAGGCTGCTTACCT+CGG	+	chr8_3:55626856-55626875	None:intergenic	45.0%
	TTGTCGGTGAGGATTGTGTT+AGG	+	chr8_3:55626869-55626888	None:intergenic	45.0%
!!!	TGTTGTTTTCTCACCGTCGT+TGG	+	chr8_3:55626949-55626968	None:intergenic	45.0%
	GAGTTGGAATGAGAATGAGG+AGG	+	chr8_3:55627014-55627033	None:intergenic	45.0%
	GAGGAAGATTCACGTGAATG+TGG	+	chr8_3:55627047-55627066	None:intergenic	45.0%
	CAAGCTTCCCATAACAGGAA+AGG	-	chr8_3:55627098-55627117	Msa1296330:CDS	45.0%
!	GATGATGATGATGCAGATCG+TGG	-	chr8_3:55627179-55627198	Msa1296330:intron	45.0%
	GCAGGAAAATAGCATCTCCT+AGG	+	chr8_3:55627209-55627228	None:intergenic	45.0%
	CACCATCAATCTCTTTGTCC+CGG	-	chr8_3:55627451-55627470	Msa1296330:intron	45.0%
	ACCATCAATCTCTTTGTCCC+GGG	-	chr8_3:55627452-55627471	Msa1296330:intron	45.0%
	TTATCTGACATAGACACCCC+GGG	+	chr8_3:55627472-55627491	None:intergenic	45.0%
	CAGTAATGAAGCACGGACAT+CGG	+	chr8_3:55627567-55627586	None:intergenic	45.0%
	ATTCATGGACACCATGCTAG+TGG	+	chr8_3:55627897-55627916	None:intergenic	45.0%
	AGACTCGATCATACCATACG+TGG	-	chr8_3:55628394-55628413	Msa1296330:CDS	45.0%
!!!	TTATTTTCTTAAAATTTTAT+TGG	-	chr8_3:55627519-55627538	Msa1296330:intron	5.0%
!!	AAAAGAAAAATTAAATAAAA+AGG	+	chr8_3:55627795-55627814	None:intergenic	5.0%
!!!	TTATTTTCTTAAAATTTTAT+TGG	-	chr8_3:55627519-55627538	Msa1296330:intron	5.0%
!!	AAAAGAAAAATTAAATAAAA+AGG	+	chr8_3:55627795-55627814	None:intergenic	5.0%
	ATCACGTGATCTTGTCGGTG+AGG	+	chr8_3:55626880-55626899	None:intergenic	50.0%
	TCACCGACAAGATCACGTGA+TGG	-	chr8_3:55626879-55626898	Msa1296330:CDS	50.0%
	CACCGACAAGATCACGTGAT+GGG	-	chr8_3:55626880-55626899	Msa1296330:CDS	50.0%
	AGCCCATCACGTGATCTTGT+CGG	+	chr8_3:55626885-55626904	None:intergenic	50.0%
	CGTTGGAAGAGTCACGTGAT+GGG	+	chr8_3:55626932-55626951	None:intergenic	50.0%
	TCGTTGGAAGAGTCACGTGA+TGG	+	chr8_3:55626933-55626952	None:intergenic	50.0%
	TCACGTGACTCTTCCAACGA+CGG	-	chr8_3:55626933-55626952	Msa1296330:CDS	50.0%
!!	ATCCCAACGGGCTTTGAAGT+GGG	+	chr8_3:55626989-55627008	None:intergenic	50.0%
	AATGAGGAGGAGATCCCAAC+GGG	+	chr8_3:55627001-55627020	None:intergenic	50.0%
	GAATGAGGAGGAGATCCCAA+CGG	+	chr8_3:55627002-55627021	None:intergenic	50.0%
	AGCTTGACTGCTCTTACGTG+AGG	+	chr8_3:55627084-55627103	None:intergenic	50.0%
	GCAGTCAAGCTTCCCATAAC+AGG	-	chr8_3:55627093-55627112	Msa1296330:CDS	50.0%
	GGAAAGGTAATTGGCGTCCT+TGG	-	chr8_3:55627114-55627133	Msa1296330:CDS	50.0%
	AGGTAATTGGCGTCCTTGGA+AGG	-	chr8_3:55627118-55627137	Msa1296330:CDS	50.0%
	ATGCAGATCGTGGATTCCCT+AGG	-	chr8_3:55627189-55627208	Msa1296330:intron	50.0%
	CCATCAATCTCTTTGTCCCG+GGG	-	chr8_3:55627453-55627472	Msa1296330:intron	50.0%
!	CAATGGTTCACCGGTTGAAC+CGG	-	chr8_3:55628212-55628231	Msa1296330:CDS	50.0%
!!	GTCAATGGTACCGGTTCAAC+CGG	+	chr8_3:55628225-55628244	None:intergenic	50.0%
	ATCACGTGATCTTGTCGGTG+AGG	+	chr8_3:55626880-55626899	None:intergenic	50.0%
	TCACCGACAAGATCACGTGA+TGG	-	chr8_3:55626879-55626898	Msa1296330:CDS	50.0%
	CACCGACAAGATCACGTGAT+GGG	-	chr8_3:55626880-55626899	Msa1296330:CDS	50.0%
	AGCCCATCACGTGATCTTGT+CGG	+	chr8_3:55626885-55626904	None:intergenic	50.0%
	CGTTGGAAGAGTCACGTGAT+GGG	+	chr8_3:55626932-55626951	None:intergenic	50.0%
	TCGTTGGAAGAGTCACGTGA+TGG	+	chr8_3:55626933-55626952	None:intergenic	50.0%
	TCACGTGACTCTTCCAACGA+CGG	-	chr8_3:55626933-55626952	Msa1296330:CDS	50.0%
!!	ATCCCAACGGGCTTTGAAGT+GGG	+	chr8_3:55626989-55627008	None:intergenic	50.0%
	AATGAGGAGGAGATCCCAAC+GGG	+	chr8_3:55627001-55627020	None:intergenic	50.0%
	GAATGAGGAGGAGATCCCAA+CGG	+	chr8_3:55627002-55627021	None:intergenic	50.0%
	AGCTTGACTGCTCTTACGTG+AGG	+	chr8_3:55627084-55627103	None:intergenic	50.0%
	GCAGTCAAGCTTCCCATAAC+AGG	-	chr8_3:55627093-55627112	Msa1296330:CDS	50.0%
	GGAAAGGTAATTGGCGTCCT+TGG	-	chr8_3:55627114-55627133	Msa1296330:CDS	50.0%
	AGGTAATTGGCGTCCTTGGA+AGG	-	chr8_3:55627118-55627137	Msa1296330:CDS	50.0%
	ATGCAGATCGTGGATTCCCT+AGG	-	chr8_3:55627189-55627208	Msa1296330:intron	50.0%
	CCATCAATCTCTTTGTCCCG+GGG	-	chr8_3:55627453-55627472	Msa1296330:intron	50.0%
!	CAATGGTTCACCGGTTGAAC+CGG	-	chr8_3:55628212-55628231	Msa1296330:CDS	50.0%
!!	GTCAATGGTACCGGTTCAAC+CGG	+	chr8_3:55628225-55628244	None:intergenic	50.0%
!!	CGTAAGTGTTGGGGCATGCA+AGG	+	chr8_3:55626668-55626687	None:intergenic	55.0%
	GTTAGCCAAGACAGACTCCG+AGG	-	chr8_3:55626836-55626855	Msa1296330:three_prime_UTR	55.0%
	GCTTACCTCGGAGTCTGTCT+TGG	+	chr8_3:55626844-55626863	None:intergenic	55.0%
	AAGCCCACTTCAAAGCCCGT+TGG	-	chr8_3:55626983-55627002	Msa1296330:CDS	55.0%
	AGCCCACTTCAAAGCCCGTT+GGG	-	chr8_3:55626984-55627003	Msa1296330:CDS	55.0%
!!	GATCCCAACGGGCTTTGAAG+TGG	+	chr8_3:55626990-55627009	None:intergenic	55.0%
	ATGTGGGCCCAACGATGAGT+TGG	+	chr8_3:55627030-55627049	None:intergenic	55.0%
!	TGAGGCAGAGTATCTCGTGG+AGG	+	chr8_3:55627066-55627085	None:intergenic	55.0%
!	ACGTGAGGCAGAGTATCTCG+TGG	+	chr8_3:55627069-55627088	None:intergenic	55.0%
	CCCCGGGACAAAGAGATTGA+TGG	+	chr8_3:55627456-55627475	None:intergenic	55.0%
	GTCAGGAGTTGCCACTAGCA+TGG	-	chr8_3:55627883-55627902	Msa1296330:intron	55.0%
	CTTGCTCCCCCTCCATATAG+TGG	+	chr8_3:55628180-55628199	None:intergenic	55.0%
!!	CGTAAGTGTTGGGGCATGCA+AGG	+	chr8_3:55626668-55626687	None:intergenic	55.0%
	GTTAGCCAAGACAGACTCCG+AGG	-	chr8_3:55626836-55626855	Msa1296330:three_prime_UTR	55.0%
	GCTTACCTCGGAGTCTGTCT+TGG	+	chr8_3:55626844-55626863	None:intergenic	55.0%
	AAGCCCACTTCAAAGCCCGT+TGG	-	chr8_3:55626983-55627002	Msa1296330:CDS	55.0%
	AGCCCACTTCAAAGCCCGTT+GGG	-	chr8_3:55626984-55627003	Msa1296330:CDS	55.0%
!!	GATCCCAACGGGCTTTGAAG+TGG	+	chr8_3:55626990-55627009	None:intergenic	55.0%
	ATGTGGGCCCAACGATGAGT+TGG	+	chr8_3:55627030-55627049	None:intergenic	55.0%
!	TGAGGCAGAGTATCTCGTGG+AGG	+	chr8_3:55627066-55627085	None:intergenic	55.0%
!	ACGTGAGGCAGAGTATCTCG+TGG	+	chr8_3:55627069-55627088	None:intergenic	55.0%
	CCCCGGGACAAAGAGATTGA+TGG	+	chr8_3:55627456-55627475	None:intergenic	55.0%
	GTCAGGAGTTGCCACTAGCA+TGG	-	chr8_3:55627883-55627902	Msa1296330:intron	55.0%
	CTTGCTCCCCCTCCATATAG+TGG	+	chr8_3:55628180-55628199	None:intergenic	55.0%
	GGGCATGCAAGGACAGCTAG+TGG	+	chr8_3:55626657-55626676	None:intergenic	60.0%
	CAAGCGGGTGCGGATTTGTC+AGG	-	chr8_3:55627866-55627885	Msa1296330:intron	60.0%
	GGGCATGCAAGGACAGCTAG+TGG	+	chr8_3:55626657-55626676	None:intergenic	60.0%
	CAAGCGGGTGCGGATTTGTC+AGG	-	chr8_3:55627866-55627885	Msa1296330:intron	60.0%

Chromosome	Type	Strat	End	Strand	Name
chr8_3	gene	55626628	55628638	55626628	ID=Msa1296330;Name=Msa1296330
chr8_3	mRNA	55626628	55628638	55626628	ID=Msa1296330-mRNA-1;Parent=Msa1296330;Name=Msa1296330-mRNA-1;_AED=0.03;_eAED=0.03;_QI=173\|1\|1\|1\|1\|1\|3\|243\|330
chr8_3	exon	55626628	55627158	55626628	ID=Msa1296330-mRNA-1:exon:15916;Parent=Msa1296330-mRNA-1
chr8_3	exon	55627242	55627427	55627242	ID=Msa1296330-mRNA-1:exon:15915;Parent=Msa1296330-mRNA-1
chr8_3	exon	55627947	55628638	55627947	ID=Msa1296330-mRNA-1:exon:15914;Parent=Msa1296330-mRNA-1
chr8_3	five_prime_UTR	55628466	55628638	55628466	ID=Msa1296330-mRNA-1:five_prime_utr;Parent=Msa1296330-mRNA-1
chr8_3	CDS	55627947	55628465	55627947	ID=Msa1296330-mRNA-1:cds;Parent=Msa1296330-mRNA-1
chr8_3	CDS	55627242	55627427	55627242	ID=Msa1296330-mRNA-1:cds;Parent=Msa1296330-mRNA-1
chr8_3	CDS	55626871	55627158	55626871	ID=Msa1296330-mRNA-1:cds;Parent=Msa1296330-mRNA-1
chr8_3	three_prime_UTR	55626628	55626870	55626628	ID=Msa1296330-mRNA-1:three_prime_utr;Parent=Msa1296330-mRNA-1

Gene Sequence

>Msa1296330

ATGAAACCAGAAAACACCACCAACAACATTACAATGTTAGCCAAGACAGACTCCGAGGTAAGCAGCCTAACACAATCCTCACCGACAAGATCACGTGATGGGCTTCGTGCAGTTTACTACGTACAAAGCCCATCACGTGACTCTTCCAACGACGGTGAGAAAACAACAAACTCCTTTAACTCAAGCCCACTTCAAAGCCCGTTGGGATCTCCTCCTCATTCTCATTCCAACTCATCGTTGGGCCCACATTCACGTGAATCTTCCTCCACGAGATACTCTGCCTCACGTAAGAGCAGTCAAGCTTCCCATAACAGGAAAGGTAATTGGCGTCCTTGGAAGGATCAGTTTAATGCCATTGAAGAAGAAGGGCTTCTTGATGATGATGATGATGCAGATCGTGGATTCCCTAGGAGATGCTATTTTCCTGCTTTTGTTGTTTGTTTCTTTGTTCTCTTCACTGTTTTCTCTCTCATTCTTTGGGCTGCAAGTCGCCCTCAAAAACCTGCCATTTTTCTCAAGAGTATAACATTTGATAGATTTATTATTCAAGCGGGTGCGGATTTGTCAGGAGTTGCCACTAGCATGGTGTCCATGAATTCCACTGTGAAAATGACATTTAGAAACACTGCAACATTTTTTGGGGTCCATGTTGCATCAACTCCATTAGATCTCAATTATTACCAACTTACACTAGCAACTGGAAATATGCCTAAGTTTTATCAATCAAGAAAAAGTCAAAGATCTATTAAAGTGATGGTAAAAGGAAGTCATATTCCACTATATGGAGGGGGAGCAAGATTGAACACTATCAATGGTTCACCGGTTGAACCGGTACCATTGACATTGAATATTATGGTGAGGTCAAAAGCTTATGTATTAGGGGCATTGGTGAAGCCAAGATTCAACAAGAAAATTGAGTGTGCATTGATTATGGATCCGAAGAAAATGAGTAAGCCTATTCGACTTACCAACAAGTGTACGTATGAGTTATAG

Protein sequence

>Msa1296330

MKPENTTNNITMLAKTDSEVSSLTQSSPTRSRDGLRAVYYVQSPSRDSSNDGEKTTNSFNSSPLQSPLGSPPHSHSNSSLGPHSRESSSTRYSASRKSSQASHNRKGNWRPWKDQFNAIEEEGLLDDDDDADRGFPRRCYFPAFVVCFFVLFTVFSLILWAASRPQKPAIFLKSITFDRFIIQAGADLSGVATSMVSMNSTVKMTFRNTATFFGVHVASTPLDLNYYQLTLATGNMPKFYQSRKSQRSIKVMVKGSHIPLYGGGARLNTINGSPVEPVPLTLNIMVRSKAYVLGALVKPRFNKKIECALIMDPKKMSKPIRLTNKCTYEL*