Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126750 | XP_003590923.2 | 97.688 | 519 | 12 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1030 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126750 | sp|O04161|AMT12_SOLLC | 77.778 | 504 | 107 | 3 | 2 | 503 | 3 | 503 | 0.0 | 809 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126750 | G7I667 | 97.688 | 519 | 12 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1030 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0126750 | 0.806345 | 8.606135e-50 | -8.615850e-47 |
| Msa0029520 | Msa0126750 | 0.814692 | 1.353613e-51 | -8.615850e-47 |
| Msa0066890 | Msa0126750 | 0.806983 | 6.309235e-50 | -8.615850e-47 |
| Msa0067590 | Msa0126750 | 0.809101 | 2.234442e-50 | -8.615850e-47 |
| Msa0081610 | Msa0126750 | 0.813420 | 2.583131e-51 | -8.615850e-47 |
| Msa0095810 | Msa0126750 | 0.803431 | 3.497411e-49 | -8.615850e-47 |
| Msa0111110 | Msa0126750 | 0.811094 | 8.312365e-51 | -8.615850e-47 |
| Msa0126730 | Msa0126750 | 0.932892 | 4.300705e-95 | -8.615850e-47 |
| Msa0126750 | Msa0173950 | 0.812473 | 4.165960e-51 | -8.615850e-47 |
| Msa0126750 | Msa0202640 | 0.804317 | 2.289442e-49 | -8.615850e-47 |
| Msa0126750 | Msa0221850 | 0.830300 | 3.174568e-55 | -8.615850e-47 |
| Msa0126750 | Msa0268190 | 0.810416 | 1.165256e-50 | -8.615850e-47 |
| Msa0126750 | Msa0268210 | 0.830295 | 3.182757e-55 | -8.615850e-47 |
| Msa0126750 | Msa0268430 | 0.816191 | 6.280971e-52 | -8.615850e-47 |
| Msa0126750 | Msa0268450 | 0.840559 | 8.081794e-58 | -8.615850e-47 |
| Msa0126750 | Msa0268570 | 0.846204 | 2.515385e-59 | -8.615850e-47 |
| Msa0126750 | Msa0268610 | 0.803479 | 3.418951e-49 | -8.615850e-47 |
| Msa0126750 | Msa0268630 | 0.806694 | 7.264490e-50 | -8.615850e-47 |
| Msa0126750 | Msa0268660 | 0.817221 | 3.690908e-52 | -8.615850e-47 |
| Msa0126750 | Msa0268670 | 0.844771 | 6.151377e-59 | -8.615850e-47 |
| Msa0126750 | Msa0268740 | 0.801685 | 8.013330e-49 | -8.615850e-47 |
| Msa0126750 | Msa0268750 | 0.852488 | 4.468760e-61 | -8.615850e-47 |
| Msa0126750 | Msa0268830 | 0.811157 | 8.057672e-51 | -8.615850e-47 |
| Msa0126750 | Msa0268860 | 0.813173 | 2.925999e-51 | -8.615850e-47 |
| Msa0126750 | Msa0268880 | 0.827330 | 1.660931e-54 | -8.615850e-47 |
| Msa0126750 | Msa0268960 | 0.836937 | 6.982823e-57 | -8.615850e-47 |
| Msa0126750 | Msa0269040 | 0.815448 | 9.196122e-52 | -8.615850e-47 |
| Msa0126750 | Msa0269070 | 0.828431 | 9.026417e-55 | -8.615850e-47 |
| Msa0126750 | Msa0269090 | 0.833783 | 4.374374e-56 | -8.615850e-47 |
| Msa0126750 | Msa0269150 | 0.824562 | 7.547393e-54 | -8.615850e-47 |
| Msa0126750 | Msa0293720 | -0.817630 | 2.985644e-52 | -8.615850e-47 |
| Msa0126750 | Msa0310720 | 0.820693 | 5.993101e-53 | -8.615850e-47 |
| Msa0126750 | Msa0310730 | 0.831459 | 1.649406e-55 | -8.615850e-47 |
| Msa0126750 | Msa0368450 | 0.813016 | 3.167787e-51 | -8.615850e-47 |
| Msa0126750 | Msa0389080 | 0.829829 | 4.134066e-55 | -8.615850e-47 |
| Msa0126750 | Msa0405420 | 0.810135 | 1.339811e-50 | -8.615850e-47 |
| Msa0126750 | Msa0405440 | 0.820731 | 5.873401e-53 | -8.615850e-47 |
| Msa0126750 | Msa0405510 | 0.803534 | 3.329141e-49 | -8.615850e-47 |
| Msa0126750 | Msa0405530 | 0.806977 | 6.329861e-50 | -8.615850e-47 |
| Msa0126750 | Msa0449910 | 0.821907 | 3.144903e-53 | -8.615850e-47 |
| Msa0126750 | Msa0461620 | 0.802732 | 4.880231e-49 | -8.615850e-47 |
| Msa0126750 | Msa0476890 | 0.801983 | 6.959544e-49 | -8.615850e-47 |
| Msa0126750 | Msa0484040 | 0.800734 | 1.254473e-48 | -8.615850e-47 |
| Msa0126750 | Msa0493180 | 0.827973 | 1.163509e-54 | -8.615850e-47 |
| Msa0126750 | Msa0548650 | 0.800944 | 1.136471e-48 | -8.615850e-47 |
| Msa0126750 | Msa0576020 | 0.812603 | 3.902604e-51 | -8.615850e-47 |
| Msa0126750 | Msa0582510 | 0.811355 | 7.297495e-51 | -8.615850e-47 |
| Msa0126750 | Msa0582540 | 0.805923 | 1.055703e-49 | -8.615850e-47 |
| Msa0126750 | Msa0582560 | 0.822469 | 2.329362e-53 | -8.615850e-47 |
| Msa0126750 | Msa0582630 | 0.808463 | 3.059755e-50 | -8.615850e-47 |
| Msa0126750 | Msa0582650 | 0.861478 | 9.974741e-64 | -8.615850e-47 |
| Msa0126750 | Msa0582690 | 0.812439 | 4.237852e-51 | -8.615850e-47 |
| Msa0126750 | Msa0582770 | 0.858429 | 8.286345e-63 | -8.615850e-47 |
| Msa0126750 | Msa0582810 | 0.820490 | 6.673638e-53 | -8.615850e-47 |
| Msa0126750 | Msa0582860 | 0.806320 | 8.712544e-50 | -8.615850e-47 |
| Msa0126750 | Msa0582910 | 0.802602 | 5.190454e-49 | -8.615850e-47 |
| Msa0126750 | Msa0582920 | 0.855857 | 4.759676e-62 | -8.615850e-47 |
| Msa0126750 | Msa0591350 | 0.805848 | 1.094727e-49 | -8.615850e-47 |
| Msa0126750 | Msa0605040 | 0.812681 | 3.752083e-51 | -8.615850e-47 |
| Msa0126750 | Msa0605160 | 0.814660 | 1.375963e-51 | -8.615850e-47 |
| Msa0126750 | Msa0662370 | 0.813395 | 2.616268e-51 | -8.615850e-47 |
| Msa0126750 | Msa0796580 | 0.808762 | 2.640375e-50 | -8.615850e-47 |
| Msa0126750 | Msa0827520 | 0.802185 | 6.325320e-49 | -8.615850e-47 |
| Msa0126750 | Msa0833950 | 0.808803 | 2.588505e-50 | -8.615850e-47 |
| Msa0126750 | Msa0881530 | 0.847586 | 1.052701e-59 | -8.615850e-47 |
| Msa0126750 | Msa0908240 | 0.807725 | 4.392433e-50 | -8.615850e-47 |
| Msa0126750 | Msa0908430 | 0.809162 | 2.167996e-50 | -8.615850e-47 |
| Msa0126750 | Msa0908450 | 0.815354 | 9.648860e-52 | -8.615850e-47 |
| Msa0126750 | Msa0908480 | 0.828406 | 9.151642e-55 | -8.615850e-47 |
| Msa0126750 | Msa0908530 | 0.809917 | 1.492652e-50 | -8.615850e-47 |
| Msa0126750 | Msa0908590 | 0.800917 | 1.150658e-48 | -8.615850e-47 |
| Msa0126750 | Msa0908610 | 0.815397 | 9.439361e-52 | -8.615850e-47 |
| Msa0126750 | Msa0908670 | 0.802403 | 5.705267e-49 | -8.615850e-47 |
| Msa0126750 | Msa0911190 | 0.811091 | 8.326715e-51 | -8.615850e-47 |
| Msa0126750 | Msa0919120 | 0.824533 | 7.665092e-54 | -8.615850e-47 |
| Msa0126750 | Msa0924830 | 0.831551 | 1.565614e-55 | -8.615850e-47 |
| Msa0126750 | Msa0924880 | 0.813395 | 2.616245e-51 | -8.615850e-47 |
| Msa0126750 | Msa0924920 | 0.816878 | 4.406165e-52 | -8.615850e-47 |
| Msa0126750 | Msa0924980 | 0.809148 | 2.183557e-50 | -8.615850e-47 |
| Msa0126750 | Msa0925030 | 0.832956 | 7.031825e-56 | -8.615850e-47 |
| Msa0126750 | Msa0925100 | 0.819914 | 9.043518e-53 | -8.615850e-47 |
| Msa0126750 | Msa0925110 | 0.832387 | 9.731386e-56 | -8.615850e-47 |
| Msa0126750 | Msa0931000 | 0.826769 | 2.262364e-54 | -8.615850e-47 |
| Msa0126750 | Msa0931130 | 0.802320 | 5.932181e-49 | -8.615850e-47 |
| Msa0126750 | Msa0931230 | 0.830125 | 3.501252e-55 | -8.615850e-47 |
| Msa0126750 | Msa0931260 | 0.825893 | 3.656534e-54 | -8.615850e-47 |
| Msa0126750 | Msa0982090 | 0.855311 | 6.867957e-62 | -8.615850e-47 |
| Msa0126750 | Msa1064410 | 0.824293 | 8.732000e-54 | -8.615850e-47 |
| Msa0126750 | Msa1086090 | 0.849069 | 4.096998e-60 | -8.615850e-47 |
| Msa0126750 | Msa1086140 | 0.801453 | 8.942432e-49 | -8.615850e-47 |
| Msa0126750 | Msa1086200 | 0.870057 | 1.945161e-66 | -8.615850e-47 |
| Msa0126750 | Msa1086270 | 0.813653 | 2.296060e-51 | -8.615850e-47 |
| Msa0126750 | Msa1086320 | 0.810995 | 8.735727e-51 | -8.615850e-47 |
| Msa0126750 | Msa1086350 | 0.807417 | 5.107264e-50 | -8.615850e-47 |
| Msa0126750 | Msa1086380 | 0.806217 | 9.156737e-50 | -8.615850e-47 |
| Msa0126750 | Msa1086490 | 0.819365 | 1.207056e-52 | -8.615850e-47 |
| Msa0126750 | Msa1086510 | 0.819943 | 8.906288e-53 | -8.615850e-47 |
| Msa0126750 | Msa1086550 | 0.807780 | 4.275558e-50 | -8.615850e-47 |
| Msa0126750 | Msa1086640 | 0.800502 | 1.398558e-48 | -8.615850e-47 |
| Msa0126750 | Msa1086670 | 0.833372 | 5.538934e-56 | -8.615850e-47 |
| Msa0126750 | Msa1086680 | 0.810608 | 1.059086e-50 | -8.615850e-47 |
| Msa0126750 | Msa1086740 | 0.831895 | 1.287873e-55 | -8.615850e-47 |
| Msa0126750 | Msa1086840 | 0.811433 | 7.018683e-51 | -8.615850e-47 |
| Msa0126750 | Msa1086900 | 0.856382 | 3.340594e-62 | -8.615850e-47 |
| Msa0126750 | Msa1086960 | 0.834330 | 3.190660e-56 | -8.615850e-47 |
| Msa0126750 | Msa1087050 | 0.805943 | 1.045613e-49 | -8.615850e-47 |
| Msa0126750 | Msa1087110 | 0.804269 | 2.342186e-49 | -8.615850e-47 |
| Msa0126750 | Msa1091710 | 0.804902 | 1.728769e-49 | -8.615850e-47 |
| Msa0126750 | Msa1143120 | 0.805433 | 1.337826e-49 | -8.615850e-47 |
| Msa0126750 | Msa1143170 | 0.850402 | 1.737605e-60 | -8.615850e-47 |
| Msa0126750 | Msa1144380 | 0.804706 | 1.899511e-49 | -8.615850e-47 |
| Msa0126750 | Msa1171640 | 0.807415 | 5.112190e-50 | -8.615850e-47 |
| Msa0126750 | Msa1273620 | 0.830200 | 3.356805e-55 | -8.615850e-47 |
| Msa0126750 | Msa1305970 | 0.816775 | 4.647267e-52 | -8.615850e-47 |
| Msa0126750 | Msa1311600 | 0.813429 | 2.571365e-51 | -8.615850e-47 |
| Msa0126750 | Msa1354500 | 0.841638 | 4.207622e-58 | -8.615850e-47 |
| Msa0126750 | Msa1354610 | 0.802924 | 4.452624e-49 | -8.615850e-47 |
| Msa0126750 | Msa1354630 | 0.818345 | 2.057671e-52 | -8.615850e-47 |
| Msa0126750 | Msa1354760 | 0.828737 | 7.613838e-55 | -8.615850e-47 |
| Msa0126750 | Msa1354920 | 0.837738 | 4.354989e-57 | -8.615850e-47 |
| Msa0126750 | Msa1354980 | 0.803168 | 3.965063e-49 | -8.615850e-47 |
| Msa0126750 | Msa1355090 | 0.847117 | 1.416783e-59 | -8.615850e-47 |
| Msa0126750 | Msa1377360 | 0.809240 | 2.086157e-50 | -8.615850e-47 |
| Msa0126750 | Msa1380610 | 0.820841 | 5.542397e-53 | -8.615850e-47 |
| Msa0126750 | Msa1382380 | 0.853894 | 1.766374e-61 | -8.615850e-47 |
| Msa0126750 | Msa1388030 | 0.819885 | 9.180068e-53 | -8.615850e-47 |
| Msa0126750 | Msa1391110 | 0.804392 | 2.208323e-49 | -8.615850e-47 |
| Msa0126750 | Msa1394030 | 0.845641 | 3.578734e-59 | -8.615850e-47 |
| Msa0126750 | Msa1394040 | 0.801652 | 8.140665e-49 | -8.615850e-47 |
| Msa0126750 | Msa1394150 | 0.803554 | 3.297698e-49 | -8.615850e-47 |
| Msa0126750 | Msa1394160 | 0.844492 | 7.310203e-59 | -8.615850e-47 |
| Msa0126750 | Msa1394250 | 0.801006 | 1.103777e-48 | -8.615850e-47 |
| Msa0126750 | Msa1394270 | 0.803693 | 3.086242e-49 | -8.615850e-47 |
| Msa0126750 | Msa1410480 | 0.803044 | 4.205178e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126750 | MtrunA17_Chr1g0189971 | 97.688 | 519 | 12 | 0 | 1 | 519 | 1 | 519 | 0.0 | 1030 |
| Msa0126750 | MtrunA17_Chr1g0168631 | 73.320 | 506 | 123 | 5 | 1 | 503 | 1 | 497 | 0.0 | 740 |
| Msa0126750 | MtrunA17_Chr7g0262361 | 72.709 | 491 | 128 | 3 | 1 | 489 | 1 | 487 | 0.0 | 716 |
| Msa0126750 | MtrunA17_Chr7g0272721 | 71.779 | 489 | 132 | 3 | 1 | 487 | 1 | 485 | 0.0 | 704 |
| Msa0126750 | MtrunA17_Chr3g0104661 | 67.038 | 449 | 137 | 4 | 40 | 484 | 7 | 448 | 0.0 | 595 |
| Msa0126750 | MtrunA17_Chr7g0274111 | 28.608 | 388 | 217 | 14 | 112 | 479 | 100 | 447 | 5.15e-26 | 110 |
| Msa0126750 | MtrunA17_Chr1g0163571 | 25.107 | 466 | 282 | 15 | 47 | 484 | 24 | 450 | 3.24e-21 | 96.7 |
| Msa0126750 | MtrunA17_Chr7g0243071 | 26.667 | 495 | 292 | 15 | 47 | 507 | 22 | 479 | 4.59e-18 | 87.0 |
| Msa0126750 | MtrunA17_Chr8g0385081 | 24.947 | 473 | 290 | 12 | 47 | 487 | 29 | 468 | 6.94e-14 | 73.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0126750 | AT1G64780.1 | 76.255 | 518 | 106 | 6 | 2 | 513 | 4 | 510 | 0.0 | 780 |
| Msa0126750 | AT4G13510.1 | 73.879 | 513 | 120 | 7 | 4 | 514 | 1 | 501 | 0.0 | 754 |
| Msa0126750 | AT3G24300.1 | 75.720 | 486 | 109 | 4 | 3 | 486 | 4 | 482 | 0.0 | 738 |
| Msa0126750 | AT3G24290.1 | 74.741 | 483 | 113 | 4 | 3 | 483 | 4 | 479 | 0.0 | 721 |
| Msa0126750 | AT4G28700.1 | 73.131 | 495 | 124 | 5 | 2 | 489 | 3 | 495 | 0.0 | 699 |
| Msa0126750 | AT2G38290.1 | 26.078 | 464 | 288 | 13 | 47 | 488 | 20 | 450 | 1.75e-22 | 100 |
| Msa0126750 | AT2G38290.2 | 26.870 | 361 | 224 | 10 | 135 | 488 | 7 | 334 | 8.93e-20 | 91.3 |
Find 196 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAGTATGTTGATGAGATTTA+TGG | 0.173966 | 1_3:-55841943 | Msa0126750:CDS |
| GACGAGTCTATTAGGAAATT+AGG | 0.214176 | 1_3:-55841694 | Msa0126750:CDS |
| TTTGATTGGGCTTAATAAAT+TGG | 0.218891 | 1_3:-55842064 | Msa0126750:CDS |
| GCTTAATAAATTGGCGATTA+AGG | 0.220724 | 1_3:-55842055 | Msa0126750:CDS |
| GGCCTCTCCTACTATCTATT+TGG | 0.247116 | 1_3:-55842861 | Msa0126750:CDS |
| TTTGGCTTTGCTTTCGCCTT+TGG | 0.288902 | 1_3:-55842843 | Msa0126750:CDS |
| GTTATTGACTTTGCCGGTTC+AGG | 0.294088 | 1_3:-55842537 | Msa0126750:CDS |
| GGGTGGTATAGCAGGGTTAT+GGG | 0.312935 | 1_3:-55842499 | Msa0126750:CDS |
| CGGTCGAACCGCCCTATTCT+AGG | 0.319056 | 1_3:+55842459 | None:intergenic |
| TCCGGTGTTATTGACTTTGC+CGG | 0.323221 | 1_3:-55842543 | Msa0126750:CDS |
| TATGGTCAATGGAGTGCTAT+TGG | 0.333213 | 1_3:-55842285 | Msa0126750:CDS |
| AAGGGATTACCCTTCACCTT+CGG | 0.337397 | 1_3:-55842778 | Msa0126750:CDS |
| AGGGAGGTTGTTTGCGGCGC+AGG | 0.338172 | 1_3:-55841884 | Msa0126750:CDS |
| CACGGAGGGTGTGGCGCATG+GGG | 0.339247 | 1_3:-55841997 | Msa0126750:CDS |
| CACATGGTGGGTGGTATAGC+AGG | 0.340009 | 1_3:-55842507 | Msa0126750:CDS |
| AGGAAGATGACGAGTCTATT+AGG | 0.343254 | 1_3:-55841702 | Msa0126750:CDS |
| ACGAGTCTATTAGGAAATTA+GGG | 0.347347 | 1_3:-55841693 | Msa0126750:CDS |
| TGTAACTGCGCAGCCTCTAA+TGG | 0.347657 | 1_3:+55842018 | None:intergenic |
| AGGGATTACCCTTCACCTTC+GGG | 0.348884 | 1_3:-55842777 | Msa0126750:CDS |
| CCATCGTTTCGCATTGGGTT+TGG | 0.355981 | 1_3:-55842620 | Msa0126750:CDS |
| GTTGAGGTGCTGGTTATTTG+TGG | 0.363153 | 1_3:-55841859 | Msa0126750:CDS |
| ACCATTGGTTCGCGTTGGGC+TGG | 0.366798 | 1_3:+55842581 | None:intergenic |
| TAGCGCGTCGTTGGTGGTGT+TGG | 0.373610 | 1_3:-55842406 | Msa0126750:CDS |
| TTGCGGTGGTGGTGAGGAGT+GGG | 0.375025 | 1_3:+55843102 | None:intergenic |
| TGCAACGGCGGTTGCGTTTG+CGG | 0.376248 | 1_3:+55843085 | None:intergenic |
| TTGAGGTGCTGGTTATTTGT+GGG | 0.377948 | 1_3:-55841858 | Msa0126750:CDS |
| AGTATGTTGATGAGATTTAT+GGG | 0.378337 | 1_3:-55841942 | Msa0126750:CDS |
| GGCGGTTGCGTTTGCGGTGG+TGG | 0.380612 | 1_3:+55843091 | None:intergenic |
| TGGTGGTGAGGAGTGGGGCT+AGG | 0.382794 | 1_3:+55843108 | None:intergenic |
| ATTTGAGATGGTGTTGAATT+GGG | 0.384973 | 1_3:+55843049 | None:intergenic |
| TTACCCCATCGTTTCGCATT+GGG | 0.385239 | 1_3:-55842625 | Msa0126750:CDS |
| ACACGGAGGGTGTGGCGCAT+GGG | 0.388550 | 1_3:-55841998 | Msa0126750:CDS |
| TTTATAGAAGGTCCTAGAAT+AGG | 0.393823 | 1_3:-55842471 | Msa0126750:CDS |
| TTTAGTAAACGGTTATTAGT+TGG | 0.394285 | 1_3:-55842207 | Msa0126750:CDS |
| TACACGGAGGGTGTGGCGCA+TGG | 0.398795 | 1_3:-55841999 | Msa0126750:CDS |
| TATTTGAGATGGTGTTGAAT+TGG | 0.400022 | 1_3:+55843048 | None:intergenic |
| TGACAACTTTGTTTAGTAAA+CGG | 0.402627 | 1_3:-55842218 | Msa0126750:CDS |
| GGTTTGGTCTGCCGATGGTT+GGG | 0.403385 | 1_3:-55842604 | Msa0126750:CDS |
| TGGGTGGTATAGCAGGGTTA+TGG | 0.404483 | 1_3:-55842500 | Msa0126750:CDS |
| AGTAACAAAAGGAATTATTA+TGG | 0.405005 | 1_3:-55842303 | Msa0126750:CDS |
| CATGTGAACCACACCTGAAC+CGG | 0.411513 | 1_3:+55842524 | None:intergenic |
| GGCGCAGGTGGTTGAGGTGC+TGG | 0.412619 | 1_3:-55841869 | Msa0126750:CDS |
| TATTATGGTTTGGTTGGTAC+GGG | 0.415535 | 1_3:-55842374 | Msa0126750:CDS |
| TTGATGAGATTTATGGGATA+GGG | 0.415705 | 1_3:-55841936 | Msa0126750:CDS |
| CGGAGGGTGTGGCGCATGGG+GGG | 0.418635 | 1_3:-55841995 | Msa0126750:CDS |
| CATCACCATTGGTTCGCGTT+GGG | 0.420093 | 1_3:+55842577 | None:intergenic |
| TTATTATGGTTTGGTTGGTA+CGG | 0.423451 | 1_3:-55842375 | Msa0126750:CDS |
| AAAAGAAGAATATATGAGAT+AGG | 0.425528 | 1_3:+55842662 | None:intergenic |
| GTGGTATAGCAGGGTTATGG+GGG | 0.427928 | 1_3:-55842497 | Msa0126750:CDS |
| ACGGAGGGTGTGGCGCATGG+GGG | 0.428519 | 1_3:-55841996 | Msa0126750:CDS |
| ATGCAACAGACCGGCCTGTC+CGG | 0.429149 | 1_3:+55842439 | None:intergenic |
| AGCGCGTCGTTGGTGGTGTT+GGG | 0.430363 | 1_3:-55842405 | Msa0126750:CDS |
| TGGAGTGCTATTGGAAGAAC+AGG | 0.430989 | 1_3:-55842276 | Msa0126750:CDS |
| AAAGGAATTATTATGGTCAA+TGG | 0.435762 | 1_3:-55842296 | Msa0126750:CDS |
| TGTTGATGGGTGGTGGAGGG+AGG | 0.437827 | 1_3:-55841900 | Msa0126750:CDS |
| AGGTGCTGGTTATTTGTGGG+TGG | 0.439612 | 1_3:-55841855 | Msa0126750:CDS |
| GGTGCTGGTTATTTGTGGGT+GGG | 0.440274 | 1_3:-55841854 | Msa0126750:CDS |
| CAGCGATGGCGAAGGCCCAT+TGG | 0.442094 | 1_3:+55842733 | None:intergenic |
| GGATTGTTGATGGGTGGTGG+AGG | 0.443117 | 1_3:-55841904 | Msa0126750:CDS |
| GTTGATGAGATTTATGGGAT+AGG | 0.452271 | 1_3:-55841937 | Msa0126750:CDS |
| CACACTGAAGGTGCACTGAT+TGG | 0.453333 | 1_3:+55841601 | None:intergenic |
| TTTACCCCATCGTTTCGCAT+TGG | 0.453403 | 1_3:-55842626 | Msa0126750:CDS |
| GGTTTCGCCATGCTCTGCGC+AGG | 0.454596 | 1_3:-55842948 | Msa0126750:CDS |
| GGTGGTATAGCAGGGTTATG+GGG | 0.457348 | 1_3:-55842498 | Msa0126750:CDS |
| TTATAGAAGGTCCTAGAATA+GGG | 0.458590 | 1_3:-55842470 | Msa0126750:CDS |
| GCCTTCGCCATCGCTGCTGC+CGG | 0.459814 | 1_3:-55842726 | Msa0126750:CDS |
| TGCAGAGAGAACTCAATTTG+TGG | 0.460728 | 1_3:-55842685 | Msa0126750:CDS |
| TAGGAAATTAGGGTTTATGA+TGG | 0.464007 | 1_3:-55841683 | Msa0126750:CDS |
| GATTGTTGATGGGTGGTGGA+GGG | 0.464090 | 1_3:-55841903 | Msa0126750:CDS |
| TATGGATTGTTGATGGGTGG+TGG | 0.466509 | 1_3:-55841907 | Msa0126750:CDS |
| GGGTTTGGTCTGCCGATGGT+TGG | 0.467295 | 1_3:-55842605 | Msa0126750:CDS |
| GTTTGCGGCGCAGGTGGTTG+AGG | 0.472995 | 1_3:-55841875 | Msa0126750:CDS |
| TGGTGGAGGGAGGTTGTTTG+CGG | 0.475634 | 1_3:-55841890 | Msa0126750:CDS |
| CTAAATAAGCTGAGAAGAGA+AGG | 0.476158 | 1_3:+55842988 | None:intergenic |
| GTGTGGGTTTGTTGCGGCGT+GGG | 0.479169 | 1_3:-55842088 | Msa0126750:CDS |
| GTTGTTCTGTTGTGGAACCA+TGG | 0.481083 | 1_3:-55842122 | Msa0126750:CDS |
| GCACCCTCCAACAGCTTCAT+CGG | 0.484493 | 1_3:-55842819 | Msa0126750:CDS |
| CTAGAATAGGGCGGTTCGAC+CGG | 0.487260 | 1_3:-55842458 | Msa0126750:CDS |
| AACGATGGGGTAAACAAAAC+CGG | 0.487884 | 1_3:+55842635 | None:intergenic |
| CGTTGGGCTGGCCCAACCAT+CGG | 0.489504 | 1_3:+55842593 | None:intergenic |
| GTCGCTGAGTTTATTTGAGA+TGG | 0.491035 | 1_3:+55843037 | None:intergenic |
| TTTACGGGATTGTTTGCAAA+GGG | 0.491383 | 1_3:-55841967 | Msa0126750:CDS |
| GAAGTATGATGATCCATTAG+AGG | 0.491623 | 1_3:-55842031 | Msa0126750:CDS |
| GAGGAGTGGGGCTAGGTCTG+TGG | 0.495166 | 1_3:+55843115 | None:intergenic |
| TCAGGTGTGGTTCACATGGT+GGG | 0.496702 | 1_3:-55842519 | Msa0126750:CDS |
| TTTGCGGTGGTGGTGAGGAG+TGG | 0.496837 | 1_3:+55843101 | None:intergenic |
| ACAGCTTCTTTCTCTACCAA+TGG | 0.497981 | 1_3:-55842749 | Msa0126750:CDS |
| CCATGGGCCGCGATTGTGTG+TGG | 0.504024 | 1_3:-55842105 | Msa0126750:CDS |
| ATTGGTGAGCATGATGTTCA+TGG | 0.505916 | 1_3:+55842905 | None:intergenic |
| CATTGGGTTTGGTCTGCCGA+TGG | 0.506434 | 1_3:-55842609 | Msa0126750:CDS |
| ACATCACCATTGGTTCGCGT+TGG | 0.507320 | 1_3:+55842576 | None:intergenic |
| GAGGTTGTTTGCGGCGCAGG+TGG | 0.508529 | 1_3:-55841881 | Msa0126750:CDS |
| GAAAGGACATAGCGCGTCGT+TGG | 0.508596 | 1_3:-55842415 | Msa0126750:CDS |
| TCGAGGGATGATGAGACTGC+AGG | 0.509046 | 1_3:-55841772 | Msa0126750:CDS |
| AGCAAAGCCAAATAGATAGT+AGG | 0.509496 | 1_3:+55842854 | None:intergenic |
| GACGTGTGTAATGGTTTACT+TGG | 0.510713 | 1_3:-55842168 | Msa0126750:CDS |
| CCACCCATCAACAATCCATA+TGG | 0.510810 | 1_3:+55841910 | None:intergenic |
| GAGGCCATATGGATTGTTGA+TGG | 0.511702 | 1_3:-55841914 | Msa0126750:CDS |
| TACGGGATTGTTTGCAAAGG+GGG | 0.512801 | 1_3:-55841965 | Msa0126750:CDS |
| TATGGGATAGGGAGGCCATA+TGG | 0.515597 | 1_3:-55841925 | Msa0126750:CDS |
| AACGGAGCCTGCGCAGAGCA+TGG | 0.515746 | 1_3:+55842941 | None:intergenic |
| CAGCTTCTTTCTCTACCAAT+GGG | 0.516999 | 1_3:-55842748 | Msa0126750:CDS |
| AACTGCAGGTTGTTCTGTTG+TGG | 0.517299 | 1_3:-55842130 | Msa0126750:CDS |
| AATTAGGGTTTATGATGGGT+AGG | 0.517824 | 1_3:-55841678 | Msa0126750:CDS |
| ATGGAAATATGAGTAACAAA+AGG | 0.518100 | 1_3:-55842314 | Msa0126750:CDS |
| GGCCGGTCTGTTGCATTGAA+AGG | 0.519192 | 1_3:-55842432 | Msa0126750:CDS |
| AATGTCCTCGACGCTGCAGC+CGG | 0.530902 | 1_3:-55842885 | Msa0126750:CDS |
| TGGTATAGCAGGGTTATGGG+GGG | 0.532932 | 1_3:-55842496 | Msa0126750:CDS |
| GGTGTCACAACAACACTGGC+TGG | 0.534256 | 1_3:-55842255 | Msa0126750:CDS |
| CCCAAATAAAACATCACCAT+TGG | 0.534895 | 1_3:+55842566 | None:intergenic |
| GCGCAGTTACACGGAGGGTG+TGG | 0.537438 | 1_3:-55842006 | Msa0126750:CDS |
| CGTATCGTGTCCGATGGCGA+AGG | 0.537691 | 1_3:+55841630 | None:intergenic |
| CGGTTCAGGTGTGGTTCACA+TGG | 0.537956 | 1_3:-55842523 | Msa0126750:CDS |
| GCCAGCCCAACGCGAACCAA+TGG | 0.540771 | 1_3:-55842582 | Msa0126750:CDS |
| ATAGGGCGGTTCGACCGGAC+AGG | 0.541559 | 1_3:-55842453 | Msa0126750:CDS |
| GCTGTTGGAGGGTGCTCCAA+AGG | 0.541878 | 1_3:+55842827 | None:intergenic |
| GGCGGTTCGACCGGACAGGC+CGG | 0.542744 | 1_3:-55842449 | Msa0126750:CDS |
| AACGTCATTGACGTGTGTAA+TGG | 0.544203 | 1_3:-55842177 | Msa0126750:CDS |
| GGTTGGTACGGGTTCAACCC+CGG | 0.549923 | 1_3:-55842363 | Msa0126750:CDS |
| CTGTAGTCACCCGAAGGTGA+AGG | 0.551464 | 1_3:+55842768 | None:intergenic |
| TATGATGGGTAGGATTGAGC+CGG | 0.553940 | 1_3:-55841668 | Msa0126750:CDS |
| GTCCTCGACGCTGCAGCCGG+TGG | 0.554837 | 1_3:-55842882 | Msa0126750:CDS |
| AGGACATAGCGCGTCGTTGG+TGG | 0.555347 | 1_3:-55842412 | Msa0126750:CDS |
| TTCAGGTGTGGTTCACATGG+TGG | 0.556560 | 1_3:-55842520 | Msa0126750:CDS |
| AATGGAGCCACTAGTGATAC+CGG | 0.557459 | 1_3:+55842707 | None:intergenic |
| GTGTGTAATGGTTTACTTGG+CGG | 0.557557 | 1_3:-55842165 | Msa0126750:CDS |
| GCATAGGTAGTCTGCAACGG+CGG | 0.557659 | 1_3:+55843073 | None:intergenic |
| GGATGATGAGACTGCAGGGA+TGG | 0.557751 | 1_3:-55841767 | Msa0126750:CDS |
| AAGGGAGACACACTCGTGGC+CGG | 0.559805 | 1_3:+55841649 | None:intergenic |
| GTTTACGGGATTGTTTGCAA+AGG | 0.562175 | 1_3:-55841968 | Msa0126750:CDS |
| AAATTGAGTTCTCTCTGCAA+TGG | 0.563390 | 1_3:+55842689 | None:intergenic |
| ACCGGCAGCAGCGATGGCGA+AGG | 0.564745 | 1_3:+55842725 | None:intergenic |
| ATAAGCTGAGAAGAGAAGGT+AGG | 0.565446 | 1_3:+55842992 | None:intergenic |
| CACCGGCGTATCGTGTCCGA+TGG | 0.566763 | 1_3:+55841624 | None:intergenic |
| TGAAATTGTTGAGGATATCG+AGG | 0.567161 | 1_3:-55841789 | Msa0126750:CDS |
| CCATATGGATTGTTGATGGG+TGG | 0.567763 | 1_3:-55841910 | Msa0126750:CDS |
| TTATTCAGCCCATAAAATAA+CGG | 0.567889 | 1_3:+55841814 | None:intergenic |
| AACGGTTATTAGTTGGACAC+TGG | 0.568051 | 1_3:-55842200 | Msa0126750:CDS |
| AGGCCATATGGATTGTTGAT+GGG | 0.568103 | 1_3:-55841913 | Msa0126750:CDS |
| CAAACCCAATGCGAAACGAT+GGG | 0.569510 | 1_3:+55842621 | None:intergenic |
| GTCCTTTCAATGCAACAGAC+CGG | 0.570037 | 1_3:+55842430 | None:intergenic |
| TGGTGTTGAATTGGGTGCAT+AGG | 0.570282 | 1_3:+55843057 | None:intergenic |
| TTAGTCTTTGCCATGCAGCT+CGG | 0.570620 | 1_3:-55842969 | Msa0126750:CDS |
| GCGGCCGATGAAGCTGTTGG+AGG | 0.570654 | 1_3:+55842815 | None:intergenic |
| CATGGCGAAACCGAGCTGCA+TGG | 0.571462 | 1_3:+55842959 | None:intergenic |
| AGTGATACCGGCAGCAGCGA+TGG | 0.573055 | 1_3:+55842719 | None:intergenic |
| CGGCCGATGAAGCTGTTGGA+GGG | 0.574853 | 1_3:+55842816 | None:intergenic |
| GGCTGCAGCGTCGAGGACAT+TGG | 0.575668 | 1_3:+55842887 | None:intergenic |
| GTGGCGGCCGATGAAGCTGT+TGG | 0.576125 | 1_3:+55842812 | None:intergenic |
| TTGTTCTGTTGTGGAACCAT+GGG | 0.576456 | 1_3:-55842121 | Msa0126750:CDS |
| CCAAACCCAATGCGAAACGA+TGG | 0.576636 | 1_3:+55842620 | None:intergenic |
| TGACTTTGCCGGTTCAGGTG+TGG | 0.579151 | 1_3:-55842532 | Msa0126750:CDS |
| TTAGAGGCTGCGCAGTTACA+CGG | 0.582164 | 1_3:-55842015 | Msa0126750:CDS |
| TGTAGTCACCCGAAGGTGAA+GGG | 0.585601 | 1_3:+55842769 | None:intergenic |
| GAAGGTGCACTGATTGGCAC+CGG | 0.586054 | 1_3:+55841607 | None:intergenic |
| CATGGGCCGCGATTGTGTGT+GGG | 0.586850 | 1_3:-55842104 | Msa0126750:CDS |
| CGAGGGATGATGAGACTGCA+GGG | 0.589259 | 1_3:-55841771 | Msa0126750:CDS |
| GTAGGTGTTGTCTATTGCAT+AGG | 0.590077 | 1_3:+55843010 | None:intergenic |
| TGAATAAGATGAAATTGTTG+AGG | 0.592343 | 1_3:-55841798 | Msa0126750:CDS |
| AAATAACGGCACCATCGTGA+CGG | 0.592498 | 1_3:+55841828 | None:intergenic |
| AGGAAATTAGGGTTTATGAT+GGG | 0.592652 | 1_3:-55841682 | Msa0126750:CDS |
| AACAAACCCACACACAATCG+CGG | 0.593035 | 1_3:+55842098 | None:intergenic |
| GGTGTTGTCTATTGCATAGG+TGG | 0.593690 | 1_3:+55843013 | None:intergenic |
| TTGCGTTTGCGGTGGTGGTG+AGG | 0.596669 | 1_3:+55843096 | None:intergenic |
| AGTGTGTCTCCCTTCGCCAT+CGG | 0.600416 | 1_3:-55841640 | Msa0126750:CDS |
| TGCGGTGGTGGTGAGGAGTG+GGG | 0.601876 | 1_3:+55843103 | None:intergenic |
| GCTGCTGCCGGTATCACTAG+TGG | 0.604144 | 1_3:-55842714 | Msa0126750:CDS |
| CCACACACAATCGCGGCCCA+TGG | 0.607906 | 1_3:+55842105 | None:intergenic |
| AGCCAAATAGATAGTAGGAG+AGG | 0.608112 | 1_3:+55842859 | None:intergenic |
| GGTGTGGTTCACATGGTGGG+TGG | 0.612109 | 1_3:-55842516 | Msa0126750:CDS |
| ATGAGATTTATGGGATAGGG+AGG | 0.617665 | 1_3:-55841933 | Msa0126750:CDS |
| GTATCGTGTCCGATGGCGAA+GGG | 0.619413 | 1_3:+55841631 | None:intergenic |
| TGTGTGGGTTTGTTGCGGCG+TGG | 0.623345 | 1_3:-55842089 | Msa0126750:CDS |
| TGGACTTGACTAGACATGGT+GGG | 0.625359 | 1_3:-55841747 | Msa0126750:CDS |
| GATTGTGTGTGGGTTTGTTG+CGG | 0.627273 | 1_3:-55842094 | Msa0126750:CDS |
| GGTGCATAGGTAGTCTGCAA+CGG | 0.633576 | 1_3:+55843070 | None:intergenic |
| GAAATTGTTGAGGATATCGA+GGG | 0.633706 | 1_3:-55841788 | Msa0126750:CDS |
| AACAGGTGTCACAACAACAC+TGG | 0.637368 | 1_3:-55842259 | Msa0126750:CDS |
| CGCCATCGGACACGATACGC+CGG | 0.637691 | 1_3:-55841626 | Msa0126750:CDS |
| AACGGCGGTTGCGTTTGCGG+TGG | 0.642746 | 1_3:+55843088 | None:intergenic |
| TGCTTATGCGTATCATGACG+AGG | 0.643185 | 1_3:-55841722 | Msa0126750:CDS |
| GGCCACCGGCTGCAGCGTCG+AGG | 0.648352 | 1_3:+55842880 | None:intergenic |
| TAGATAGTAGGAGAGGCCAC+CGG | 0.654386 | 1_3:+55842866 | None:intergenic |
| ACATGGTGGGTGGTATAGCA+GGG | 0.662991 | 1_3:-55842506 | Msa0126750:CDS |
| AAGTGATGATATCACACTGA+AGG | 0.666643 | 1_3:+55841589 | None:intergenic |
| AAGAAGCTGTAGTCACCCGA+AGG | 0.668205 | 1_3:+55842762 | None:intergenic |
| AGGCTGCGCAGTTACACGGA+GGG | 0.669758 | 1_3:-55842011 | Msa0126750:CDS |
| ACCGGCAAAGTCAATAACAC+CGG | 0.670560 | 1_3:+55842542 | None:intergenic |
| GGCGAAGGGAGACACACTCG+TGG | 0.675062 | 1_3:+55841645 | None:intergenic |
| AAACCCAATGCGAAACGATG+GGG | 0.679819 | 1_3:+55842622 | None:intergenic |
| TAGAAGGTCCTAGAATAGGG+CGG | 0.681945 | 1_3:-55842467 | Msa0126750:CDS |
| TGGGTGGGTTACCGTCACGA+TGG | 0.684596 | 1_3:-55841839 | Msa0126750:CDS |
| GGGATGGACTTGACTAGACA+TGG | 0.695287 | 1_3:-55841751 | Msa0126750:CDS |
| ATGGACTTGACTAGACATGG+TGG | 0.698702 | 1_3:-55841748 | Msa0126750:CDS |
| TTACGGGATTGTTTGCAAAG+GGG | 0.721445 | 1_3:-55841966 | Msa0126750:CDS |
| GAGGCTGCGCAGTTACACGG+AGG | 0.735378 | 1_3:-55842012 | Msa0126750:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATATTCTTCTTTTTTAAC+CGG | - | chr1_3:55842083-55842102 | Msa0126750:CDS | 15.0% |
| !!! | ATATATTCTTCTTTTTTAAC+CGG | - | chr1_3:55842083-55842102 | Msa0126750:CDS | 15.0% |
| !! | AAAAGAAGAATATATGAGAT+AGG | + | chr1_3:55842078-55842097 | None:intergenic | 20.0% |
| !! | TGCAATTATTAAAAATGAAC+CGG | + | chr1_3:55842396-55842415 | None:intergenic | 20.0% |
| !! | TTAATAATTGCAAAAAGCTA+TGG | - | chr1_3:55842404-55842423 | Msa0126750:CDS | 20.0% |
| !! | AGTAACAAAAGGAATTATTA+TGG | - | chr1_3:55842434-55842453 | Msa0126750:CDS | 20.0% |
| !! | AAAAGAAGAATATATGAGAT+AGG | + | chr1_3:55842078-55842097 | None:intergenic | 20.0% |
| !! | TGCAATTATTAAAAATGAAC+CGG | + | chr1_3:55842396-55842415 | None:intergenic | 20.0% |
| !! | TTAATAATTGCAAAAAGCTA+TGG | - | chr1_3:55842404-55842423 | Msa0126750:CDS | 20.0% |
| !! | AGTAACAAAAGGAATTATTA+TGG | - | chr1_3:55842434-55842453 | Msa0126750:CDS | 20.0% |
| !!! | TGTTGGGTTCTTTTTTATTA+TGG | - | chr1_3:55842348-55842367 | Msa0126750:CDS | 25.0% |
| !!! | GGTTCTTTTTTATTATGGTT+TGG | - | chr1_3:55842353-55842372 | Msa0126750:CDS | 25.0% |
| !!! | CTTTTTTATTATGGTTTGGT+TGG | - | chr1_3:55842357-55842376 | Msa0126750:CDS | 25.0% |
| ! | CAATTATTAAAAATGAACCG+GGG | + | chr1_3:55842394-55842413 | None:intergenic | 25.0% |
| ! | GCAATTATTAAAAATGAACC+GGG | + | chr1_3:55842395-55842414 | None:intergenic | 25.0% |
| ! | ATGGAAATATGAGTAACAAA+AGG | - | chr1_3:55842423-55842442 | Msa0126750:CDS | 25.0% |
| ! | AAAGGAATTATTATGGTCAA+TGG | - | chr1_3:55842441-55842460 | Msa0126750:CDS | 25.0% |
| !! | TGACAACTTTGTTTAGTAAA+CGG | - | chr1_3:55842519-55842538 | Msa0126750:CDS | 25.0% |
| ! | TTTAGTAAACGGTTATTAGT+TGG | - | chr1_3:55842530-55842549 | Msa0126750:CDS | 25.0% |
| ! | TTTGATTGGGCTTAATAAAT+TGG | - | chr1_3:55842673-55842692 | Msa0126750:CDS | 25.0% |
| !! | AGTATGTTGATGAGATTTAT+GGG | - | chr1_3:55842795-55842814 | Msa0126750:CDS | 25.0% |
| ! | TTATTCAGCCCATAAAATAA+CGG | + | chr1_3:55842926-55842945 | None:intergenic | 25.0% |
| ! | TGAATAAGATGAAATTGTTG+AGG | - | chr1_3:55842939-55842958 | Msa0126750:CDS | 25.0% |
| !!! | TGTTGGGTTCTTTTTTATTA+TGG | - | chr1_3:55842348-55842367 | Msa0126750:CDS | 25.0% |
| !!! | GGTTCTTTTTTATTATGGTT+TGG | - | chr1_3:55842353-55842372 | Msa0126750:CDS | 25.0% |
| !!! | CTTTTTTATTATGGTTTGGT+TGG | - | chr1_3:55842357-55842376 | Msa0126750:CDS | 25.0% |
| ! | CAATTATTAAAAATGAACCG+GGG | + | chr1_3:55842394-55842413 | None:intergenic | 25.0% |
| ! | GCAATTATTAAAAATGAACC+GGG | + | chr1_3:55842395-55842414 | None:intergenic | 25.0% |
| ! | ATGGAAATATGAGTAACAAA+AGG | - | chr1_3:55842423-55842442 | Msa0126750:CDS | 25.0% |
| ! | AAAGGAATTATTATGGTCAA+TGG | - | chr1_3:55842441-55842460 | Msa0126750:CDS | 25.0% |
| !! | TGACAACTTTGTTTAGTAAA+CGG | - | chr1_3:55842519-55842538 | Msa0126750:CDS | 25.0% |
| ! | TTTAGTAAACGGTTATTAGT+TGG | - | chr1_3:55842530-55842549 | Msa0126750:CDS | 25.0% |
| ! | TTTGATTGGGCTTAATAAAT+TGG | - | chr1_3:55842673-55842692 | Msa0126750:CDS | 25.0% |
| !! | AGTATGTTGATGAGATTTAT+GGG | - | chr1_3:55842795-55842814 | Msa0126750:CDS | 25.0% |
| ! | TTATTCAGCCCATAAAATAA+CGG | + | chr1_3:55842926-55842945 | None:intergenic | 25.0% |
| ! | TGAATAAGATGAAATTGTTG+AGG | - | chr1_3:55842939-55842958 | Msa0126750:CDS | 25.0% |
| ! | ATTTGAGATGGTGTTGAATT+GGG | + | chr1_3:55841691-55841710 | None:intergenic | 30.0% |
| ! | TATTTGAGATGGTGTTGAAT+TGG | + | chr1_3:55841692-55841711 | None:intergenic | 30.0% |
| !! | ACCAATGGTGATGTTTTATT+TGG | - | chr1_3:55842170-55842189 | Msa0126750:CDS | 30.0% |
| !!! | CCAATGGTGATGTTTTATTT+GGG | - | chr1_3:55842171-55842190 | Msa0126750:CDS | 30.0% |
| TTTATAGAAGGTCCTAGAAT+AGG | - | chr1_3:55842266-55842285 | Msa0126750:CDS | 30.0% | |
| TTATAGAAGGTCCTAGAATA+GGG | - | chr1_3:55842267-55842286 | Msa0126750:CDS | 30.0% | |
| !! | TTATTATGGTTTGGTTGGTA+CGG | - | chr1_3:55842362-55842381 | Msa0126750:CDS | 30.0% |
| GCTTAATAAATTGGCGATTA+AGG | - | chr1_3:55842682-55842701 | Msa0126750:CDS | 30.0% | |
| ! | GAGTATGTTGATGAGATTTA+TGG | - | chr1_3:55842794-55842813 | Msa0126750:CDS | 30.0% |
| TTGATGAGATTTATGGGATA+GGG | - | chr1_3:55842801-55842820 | Msa0126750:CDS | 30.0% | |
| ACGAGTCTATTAGGAAATTA+GGG | - | chr1_3:55843044-55843063 | Msa0126750:CDS | 30.0% | |
| TAGGAAATTAGGGTTTATGA+TGG | - | chr1_3:55843054-55843073 | Msa0126750:CDS | 30.0% | |
| AGGAAATTAGGGTTTATGAT+GGG | - | chr1_3:55843055-55843074 | Msa0126750:CDS | 30.0% | |
| ! | ATTTGAGATGGTGTTGAATT+GGG | + | chr1_3:55841691-55841710 | None:intergenic | 30.0% |
| ! | TATTTGAGATGGTGTTGAAT+TGG | + | chr1_3:55841692-55841711 | None:intergenic | 30.0% |
| !! | ACCAATGGTGATGTTTTATT+TGG | - | chr1_3:55842170-55842189 | Msa0126750:CDS | 30.0% |
| !!! | CCAATGGTGATGTTTTATTT+GGG | - | chr1_3:55842171-55842190 | Msa0126750:CDS | 30.0% |
| TTTATAGAAGGTCCTAGAAT+AGG | - | chr1_3:55842266-55842285 | Msa0126750:CDS | 30.0% | |
| TTATAGAAGGTCCTAGAATA+GGG | - | chr1_3:55842267-55842286 | Msa0126750:CDS | 30.0% | |
| !! | TTATTATGGTTTGGTTGGTA+CGG | - | chr1_3:55842362-55842381 | Msa0126750:CDS | 30.0% |
| GCTTAATAAATTGGCGATTA+AGG | - | chr1_3:55842682-55842701 | Msa0126750:CDS | 30.0% | |
| ! | GAGTATGTTGATGAGATTTA+TGG | - | chr1_3:55842794-55842813 | Msa0126750:CDS | 30.0% |
| TTGATGAGATTTATGGGATA+GGG | - | chr1_3:55842801-55842820 | Msa0126750:CDS | 30.0% | |
| ACGAGTCTATTAGGAAATTA+GGG | - | chr1_3:55843044-55843063 | Msa0126750:CDS | 30.0% | |
| TAGGAAATTAGGGTTTATGA+TGG | - | chr1_3:55843054-55843073 | Msa0126750:CDS | 30.0% | |
| AGGAAATTAGGGTTTATGAT+GGG | - | chr1_3:55843055-55843074 | Msa0126750:CDS | 30.0% | |
| CTAAATAAGCTGAGAAGAGA+AGG | + | chr1_3:55841752-55841771 | None:intergenic | 35.0% | |
| ! | CATGATGTTCATGGTGTTTT+TGG | + | chr1_3:55841826-55841845 | None:intergenic | 35.0% |
| AGCAAAGCCAAATAGATAGT+AGG | + | chr1_3:55841886-55841905 | None:intergenic | 35.0% | |
| AAATTGAGTTCTCTCTGCAA+TGG | + | chr1_3:55842051-55842070 | None:intergenic | 35.0% | |
| CCCAAATAAAACATCACCAT+TGG | + | chr1_3:55842174-55842193 | None:intergenic | 35.0% | |
| !! | TATTATGGTTTGGTTGGTAC+GGG | - | chr1_3:55842363-55842382 | Msa0126750:CDS | 35.0% |
| GAAGTATGATGATCCATTAG+AGG | - | chr1_3:55842706-55842725 | Msa0126750:CDS | 35.0% | |
| TTTACGGGATTGTTTGCAAA+GGG | - | chr1_3:55842770-55842789 | Msa0126750:CDS | 35.0% | |
| ! | GTTGATGAGATTTATGGGAT+AGG | - | chr1_3:55842800-55842819 | Msa0126750:CDS | 35.0% |
| TGAAATTGTTGAGGATATCG+AGG | - | chr1_3:55842948-55842967 | Msa0126750:CDS | 35.0% | |
| GAAATTGTTGAGGATATCGA+GGG | - | chr1_3:55842949-55842968 | Msa0126750:CDS | 35.0% | |
| GACGAGTCTATTAGGAAATT+AGG | - | chr1_3:55843043-55843062 | Msa0126750:CDS | 35.0% | |
| !! | AATTAGGGTTTATGATGGGT+AGG | - | chr1_3:55843059-55843078 | Msa0126750:CDS | 35.0% |
| CTAAATAAGCTGAGAAGAGA+AGG | + | chr1_3:55841752-55841771 | None:intergenic | 35.0% | |
| ! | CATGATGTTCATGGTGTTTT+TGG | + | chr1_3:55841826-55841845 | None:intergenic | 35.0% |
| AGCAAAGCCAAATAGATAGT+AGG | + | chr1_3:55841886-55841905 | None:intergenic | 35.0% | |
| AAATTGAGTTCTCTCTGCAA+TGG | + | chr1_3:55842051-55842070 | None:intergenic | 35.0% | |
| CCCAAATAAAACATCACCAT+TGG | + | chr1_3:55842174-55842193 | None:intergenic | 35.0% | |
| !! | TATTATGGTTTGGTTGGTAC+GGG | - | chr1_3:55842363-55842382 | Msa0126750:CDS | 35.0% |
| GAAGTATGATGATCCATTAG+AGG | - | chr1_3:55842706-55842725 | Msa0126750:CDS | 35.0% | |
| TTTACGGGATTGTTTGCAAA+GGG | - | chr1_3:55842770-55842789 | Msa0126750:CDS | 35.0% | |
| ! | GTTGATGAGATTTATGGGAT+AGG | - | chr1_3:55842800-55842819 | Msa0126750:CDS | 35.0% |
| TGAAATTGTTGAGGATATCG+AGG | - | chr1_3:55842948-55842967 | Msa0126750:CDS | 35.0% | |
| GAAATTGTTGAGGATATCGA+GGG | - | chr1_3:55842949-55842968 | Msa0126750:CDS | 35.0% | |
| GACGAGTCTATTAGGAAATT+AGG | - | chr1_3:55843043-55843062 | Msa0126750:CDS | 35.0% | |
| !! | AATTAGGGTTTATGATGGGT+AGG | - | chr1_3:55843059-55843078 | Msa0126750:CDS | 35.0% |
| GTCGCTGAGTTTATTTGAGA+TGG | + | chr1_3:55841703-55841722 | None:intergenic | 40.0% | |
| ! | GTAGGTGTTGTCTATTGCAT+AGG | + | chr1_3:55841730-55841749 | None:intergenic | 40.0% |
| ATAAGCTGAGAAGAGAAGGT+AGG | + | chr1_3:55841748-55841767 | None:intergenic | 40.0% | |
| ATTGGTGAGCATGATGTTCA+TGG | + | chr1_3:55841835-55841854 | None:intergenic | 40.0% | |
| AGCCAAATAGATAGTAGGAG+AGG | + | chr1_3:55841881-55841900 | None:intergenic | 40.0% | |
| AATCCCTTAGACCGAAAAAG+TGG | + | chr1_3:55841947-55841966 | None:intergenic | 40.0% | |
| ACAGCTTCTTTCTCTACCAA+TGG | - | chr1_3:55841988-55842007 | Msa0126750:CDS | 40.0% | |
| CAGCTTCTTTCTCTACCAAT+GGG | - | chr1_3:55841989-55842008 | Msa0126750:CDS | 40.0% | |
| TGCAGAGAGAACTCAATTTG+TGG | - | chr1_3:55842052-55842071 | Msa0126750:CDS | 40.0% | |
| AACGATGGGGTAAACAAAAC+CGG | + | chr1_3:55842105-55842124 | None:intergenic | 40.0% | |
| !!! | GGTGATGTTTTATTTGGGTC+CGG | - | chr1_3:55842176-55842195 | Msa0126750:CDS | 40.0% |
| !! | TTATGGGGGGCATTTATAGA+AGG | - | chr1_3:55842254-55842273 | Msa0126750:CDS | 40.0% |
| ! | TATGGTCAATGGAGTGCTAT+TGG | - | chr1_3:55842452-55842471 | Msa0126750:CDS | 40.0% |
| AACGGTTATTAGTTGGACAC+TGG | - | chr1_3:55842537-55842556 | Msa0126750:CDS | 40.0% | |
| AACGTCATTGACGTGTGTAA+TGG | - | chr1_3:55842560-55842579 | Msa0126750:CDS | 40.0% | |
| GACGTGTGTAATGGTTTACT+TGG | - | chr1_3:55842569-55842588 | Msa0126750:CDS | 40.0% | |
| GTGTGTAATGGTTTACTTGG+CGG | - | chr1_3:55842572-55842591 | Msa0126750:CDS | 40.0% | |
| TTGTTCTGTTGTGGAACCAT+GGG | - | chr1_3:55842616-55842635 | Msa0126750:CDS | 40.0% | |
| GTTTACGGGATTGTTTGCAA+AGG | - | chr1_3:55842769-55842788 | Msa0126750:CDS | 40.0% | |
| TTACGGGATTGTTTGCAAAG+GGG | - | chr1_3:55842771-55842790 | Msa0126750:CDS | 40.0% | |
| ATGAGATTTATGGGATAGGG+AGG | - | chr1_3:55842804-55842823 | Msa0126750:CDS | 40.0% | |
| ! | AGGCCATATGGATTGTTGAT+GGG | - | chr1_3:55842824-55842843 | Msa0126750:CDS | 40.0% |
| !! | TTGAGGTGCTGGTTATTTGT+GGG | - | chr1_3:55842879-55842898 | Msa0126750:CDS | 40.0% |
| !!! | ACGATGGTGCCGTTATTTTA+TGG | - | chr1_3:55842914-55842933 | Msa0126750:CDS | 40.0% |
| !!! | CGATGGTGCCGTTATTTTAT+GGG | - | chr1_3:55842915-55842934 | Msa0126750:CDS | 40.0% |
| AGGAAGATGACGAGTCTATT+AGG | - | chr1_3:55843035-55843054 | Msa0126750:CDS | 40.0% | |
| GTCGCTGAGTTTATTTGAGA+TGG | + | chr1_3:55841703-55841722 | None:intergenic | 40.0% | |
| ! | GTAGGTGTTGTCTATTGCAT+AGG | + | chr1_3:55841730-55841749 | None:intergenic | 40.0% |
| ATAAGCTGAGAAGAGAAGGT+AGG | + | chr1_3:55841748-55841767 | None:intergenic | 40.0% | |
| ATTGGTGAGCATGATGTTCA+TGG | + | chr1_3:55841835-55841854 | None:intergenic | 40.0% | |
| AGCCAAATAGATAGTAGGAG+AGG | + | chr1_3:55841881-55841900 | None:intergenic | 40.0% | |
| AATCCCTTAGACCGAAAAAG+TGG | + | chr1_3:55841947-55841966 | None:intergenic | 40.0% | |
| ACAGCTTCTTTCTCTACCAA+TGG | - | chr1_3:55841988-55842007 | Msa0126750:CDS | 40.0% | |
| CAGCTTCTTTCTCTACCAAT+GGG | - | chr1_3:55841989-55842008 | Msa0126750:CDS | 40.0% | |
| TGCAGAGAGAACTCAATTTG+TGG | - | chr1_3:55842052-55842071 | Msa0126750:CDS | 40.0% | |
| AACGATGGGGTAAACAAAAC+CGG | + | chr1_3:55842105-55842124 | None:intergenic | 40.0% | |
| !!! | GGTGATGTTTTATTTGGGTC+CGG | - | chr1_3:55842176-55842195 | Msa0126750:CDS | 40.0% |
| !! | TTATGGGGGGCATTTATAGA+AGG | - | chr1_3:55842254-55842273 | Msa0126750:CDS | 40.0% |
| ! | TATGGTCAATGGAGTGCTAT+TGG | - | chr1_3:55842452-55842471 | Msa0126750:CDS | 40.0% |
| AACGGTTATTAGTTGGACAC+TGG | - | chr1_3:55842537-55842556 | Msa0126750:CDS | 40.0% | |
| AACGTCATTGACGTGTGTAA+TGG | - | chr1_3:55842560-55842579 | Msa0126750:CDS | 40.0% | |
| GACGTGTGTAATGGTTTACT+TGG | - | chr1_3:55842569-55842588 | Msa0126750:CDS | 40.0% | |
| GTGTGTAATGGTTTACTTGG+CGG | - | chr1_3:55842572-55842591 | Msa0126750:CDS | 40.0% | |
| TTGTTCTGTTGTGGAACCAT+GGG | - | chr1_3:55842616-55842635 | Msa0126750:CDS | 40.0% | |
| GTTTACGGGATTGTTTGCAA+AGG | - | chr1_3:55842769-55842788 | Msa0126750:CDS | 40.0% | |
| TTACGGGATTGTTTGCAAAG+GGG | - | chr1_3:55842771-55842790 | Msa0126750:CDS | 40.0% | |
| ATGAGATTTATGGGATAGGG+AGG | - | chr1_3:55842804-55842823 | Msa0126750:CDS | 40.0% | |
| ! | AGGCCATATGGATTGTTGAT+GGG | - | chr1_3:55842824-55842843 | Msa0126750:CDS | 40.0% |
| !! | TTGAGGTGCTGGTTATTTGT+GGG | - | chr1_3:55842879-55842898 | Msa0126750:CDS | 40.0% |
| !!! | ACGATGGTGCCGTTATTTTA+TGG | - | chr1_3:55842914-55842933 | Msa0126750:CDS | 40.0% |
| !!! | CGATGGTGCCGTTATTTTAT+GGG | - | chr1_3:55842915-55842934 | Msa0126750:CDS | 40.0% |
| AGGAAGATGACGAGTCTATT+AGG | - | chr1_3:55843035-55843054 | Msa0126750:CDS | 40.0% | |
| ! | TGGTGTTGAATTGGGTGCAT+AGG | + | chr1_3:55841683-55841702 | None:intergenic | 45.0% |
| ! | GGTGTTGTCTATTGCATAGG+TGG | + | chr1_3:55841727-55841746 | None:intergenic | 45.0% |
| ! | TTAGTCTTTGCCATGCAGCT+CGG | - | chr1_3:55841768-55841787 | Msa0126750:CDS | 45.0% |
| !!! | CATGGTGTTTTTGGCTCGAA+CGG | + | chr1_3:55841817-55841836 | None:intergenic | 45.0% |
| GGCCTCTCCTACTATCTATT+TGG | - | chr1_3:55841876-55841895 | Msa0126750:CDS | 45.0% | |
| !! | TTTGGCTTTGCTTTCGCCTT+TGG | - | chr1_3:55841894-55841913 | Msa0126750:CDS | 45.0% |
| AAGGGATTACCCTTCACCTT+CGG | - | chr1_3:55841959-55841978 | Msa0126750:CDS | 45.0% | |
| AATGGAGCCACTAGTGATAC+CGG | + | chr1_3:55842033-55842052 | None:intergenic | 45.0% | |
| TTTACCCCATCGTTTCGCAT+TGG | - | chr1_3:55842111-55842130 | Msa0126750:CDS | 45.0% | |
| TTACCCCATCGTTTCGCATT+GGG | - | chr1_3:55842112-55842131 | Msa0126750:CDS | 45.0% | |
| AAACCCAATGCGAAACGATG+GGG | + | chr1_3:55842118-55842137 | None:intergenic | 45.0% | |
| CAAACCCAATGCGAAACGAT+GGG | + | chr1_3:55842119-55842138 | None:intergenic | 45.0% | |
| !! | TCCGGTGTTATTGACTTTGC+CGG | - | chr1_3:55842194-55842213 | Msa0126750:CDS | 45.0% |
| ACCGGCAAAGTCAATAACAC+CGG | + | chr1_3:55842198-55842217 | None:intergenic | 45.0% | |
| !! | GTTATTGACTTTGCCGGTTC+AGG | - | chr1_3:55842200-55842219 | Msa0126750:CDS | 45.0% |
| TAGAAGGTCCTAGAATAGGG+CGG | - | chr1_3:55842270-55842289 | Msa0126750:CDS | 45.0% | |
| GTCCTTTCAATGCAACAGAC+CGG | + | chr1_3:55842310-55842329 | None:intergenic | 45.0% | |
| ! | TGGAGTGCTATTGGAAGAAC+AGG | - | chr1_3:55842461-55842480 | Msa0126750:CDS | 45.0% |
| ! | AACAGGTGTCACAACAACAC+TGG | - | chr1_3:55842478-55842497 | Msa0126750:CDS | 45.0% |
| ! | GGTTTTGCTGCTATAACTGC+AGG | - | chr1_3:55842593-55842612 | Msa0126750:CDS | 45.0% |
| AACTGCAGGTTGTTCTGTTG+TGG | - | chr1_3:55842607-55842626 | Msa0126750:CDS | 45.0% | |
| GTTGTTCTGTTGTGGAACCA+TGG | - | chr1_3:55842615-55842634 | Msa0126750:CDS | 45.0% | |
| AACAAACCCACACACAATCG+CGG | + | chr1_3:55842642-55842661 | None:intergenic | 45.0% | |
| !! | GATTGTGTGTGGGTTTGTTG+CGG | - | chr1_3:55842643-55842662 | Msa0126750:CDS | 45.0% |
| TACGGGATTGTTTGCAAAGG+GGG | - | chr1_3:55842772-55842791 | Msa0126750:CDS | 45.0% | |
| ! | GAGGCCATATGGATTGTTGA+TGG | - | chr1_3:55842823-55842842 | Msa0126750:CDS | 45.0% |
| CCACCCATCAACAATCCATA+TGG | + | chr1_3:55842830-55842849 | None:intergenic | 45.0% | |
| ! | CCATATGGATTGTTGATGGG+TGG | - | chr1_3:55842827-55842846 | Msa0126750:CDS | 45.0% |
| ! | TATGGATTGTTGATGGGTGG+TGG | - | chr1_3:55842830-55842849 | Msa0126750:CDS | 45.0% |
| !! | GTTGAGGTGCTGGTTATTTG+TGG | - | chr1_3:55842878-55842897 | Msa0126750:CDS | 45.0% |
| AAATAACGGCACCATCGTGA+CGG | + | chr1_3:55842912-55842931 | None:intergenic | 45.0% | |
| ATGGACTTGACTAGACATGG+TGG | - | chr1_3:55842989-55843008 | Msa0126750:CDS | 45.0% | |
| TGGACTTGACTAGACATGGT+GGG | - | chr1_3:55842990-55843009 | Msa0126750:CDS | 45.0% | |
| TGCTTATGCGTATCATGACG+AGG | - | chr1_3:55843015-55843034 | Msa0126750:CDS | 45.0% | |
| !! | TATGATGGGTAGGATTGAGC+CGG | - | chr1_3:55843069-55843088 | Msa0126750:CDS | 45.0% |
| ! | TGGTGTTGAATTGGGTGCAT+AGG | + | chr1_3:55841683-55841702 | None:intergenic | 45.0% |
| ! | GGTGTTGTCTATTGCATAGG+TGG | + | chr1_3:55841727-55841746 | None:intergenic | 45.0% |
| ! | TTAGTCTTTGCCATGCAGCT+CGG | - | chr1_3:55841768-55841787 | Msa0126750:CDS | 45.0% |
| !!! | CATGGTGTTTTTGGCTCGAA+CGG | + | chr1_3:55841817-55841836 | None:intergenic | 45.0% |
| GGCCTCTCCTACTATCTATT+TGG | - | chr1_3:55841876-55841895 | Msa0126750:CDS | 45.0% | |
| !! | TTTGGCTTTGCTTTCGCCTT+TGG | - | chr1_3:55841894-55841913 | Msa0126750:CDS | 45.0% |
| AAGGGATTACCCTTCACCTT+CGG | - | chr1_3:55841959-55841978 | Msa0126750:CDS | 45.0% | |
| AATGGAGCCACTAGTGATAC+CGG | + | chr1_3:55842033-55842052 | None:intergenic | 45.0% | |
| TTTACCCCATCGTTTCGCAT+TGG | - | chr1_3:55842111-55842130 | Msa0126750:CDS | 45.0% | |
| TTACCCCATCGTTTCGCATT+GGG | - | chr1_3:55842112-55842131 | Msa0126750:CDS | 45.0% | |
| AAACCCAATGCGAAACGATG+GGG | + | chr1_3:55842118-55842137 | None:intergenic | 45.0% | |
| CAAACCCAATGCGAAACGAT+GGG | + | chr1_3:55842119-55842138 | None:intergenic | 45.0% | |
| !! | TCCGGTGTTATTGACTTTGC+CGG | - | chr1_3:55842194-55842213 | Msa0126750:CDS | 45.0% |
| ACCGGCAAAGTCAATAACAC+CGG | + | chr1_3:55842198-55842217 | None:intergenic | 45.0% | |
| !! | GTTATTGACTTTGCCGGTTC+AGG | - | chr1_3:55842200-55842219 | Msa0126750:CDS | 45.0% |
| TAGAAGGTCCTAGAATAGGG+CGG | - | chr1_3:55842270-55842289 | Msa0126750:CDS | 45.0% | |
| GTCCTTTCAATGCAACAGAC+CGG | + | chr1_3:55842310-55842329 | None:intergenic | 45.0% | |
| ! | TGGAGTGCTATTGGAAGAAC+AGG | - | chr1_3:55842461-55842480 | Msa0126750:CDS | 45.0% |
| ! | AACAGGTGTCACAACAACAC+TGG | - | chr1_3:55842478-55842497 | Msa0126750:CDS | 45.0% |
| ! | GGTTTTGCTGCTATAACTGC+AGG | - | chr1_3:55842593-55842612 | Msa0126750:CDS | 45.0% |
| AACTGCAGGTTGTTCTGTTG+TGG | - | chr1_3:55842607-55842626 | Msa0126750:CDS | 45.0% | |
| GTTGTTCTGTTGTGGAACCA+TGG | - | chr1_3:55842615-55842634 | Msa0126750:CDS | 45.0% | |
| AACAAACCCACACACAATCG+CGG | + | chr1_3:55842642-55842661 | None:intergenic | 45.0% | |
| !! | GATTGTGTGTGGGTTTGTTG+CGG | - | chr1_3:55842643-55842662 | Msa0126750:CDS | 45.0% |
| TACGGGATTGTTTGCAAAGG+GGG | - | chr1_3:55842772-55842791 | Msa0126750:CDS | 45.0% | |
| ! | GAGGCCATATGGATTGTTGA+TGG | - | chr1_3:55842823-55842842 | Msa0126750:CDS | 45.0% |
| CCACCCATCAACAATCCATA+TGG | + | chr1_3:55842830-55842849 | None:intergenic | 45.0% | |
| ! | CCATATGGATTGTTGATGGG+TGG | - | chr1_3:55842827-55842846 | Msa0126750:CDS | 45.0% |
| ! | TATGGATTGTTGATGGGTGG+TGG | - | chr1_3:55842830-55842849 | Msa0126750:CDS | 45.0% |
| !! | GTTGAGGTGCTGGTTATTTG+TGG | - | chr1_3:55842878-55842897 | Msa0126750:CDS | 45.0% |
| AAATAACGGCACCATCGTGA+CGG | + | chr1_3:55842912-55842931 | None:intergenic | 45.0% | |
| ATGGACTTGACTAGACATGG+TGG | - | chr1_3:55842989-55843008 | Msa0126750:CDS | 45.0% | |
| TGGACTTGACTAGACATGGT+GGG | - | chr1_3:55842990-55843009 | Msa0126750:CDS | 45.0% | |
| TGCTTATGCGTATCATGACG+AGG | - | chr1_3:55843015-55843034 | Msa0126750:CDS | 45.0% | |
| !! | TATGATGGGTAGGATTGAGC+CGG | - | chr1_3:55843069-55843088 | Msa0126750:CDS | 45.0% |
| GGTGCATAGGTAGTCTGCAA+CGG | + | chr1_3:55841670-55841689 | None:intergenic | 50.0% | |
| TAGATAGTAGGAGAGGCCAC+CGG | + | chr1_3:55841874-55841893 | None:intergenic | 50.0% | |
| !!! | TTCATCGGCCGCCACTTTTT+CGG | - | chr1_3:55841933-55841952 | Msa0126750:CDS | 50.0% |
| CCCTTAGACCGAAAAAGTGG+CGG | + | chr1_3:55841944-55841963 | None:intergenic | 50.0% | |
| !!! | CCGCCACTTTTTCGGTCTAA+GGG | - | chr1_3:55841941-55841960 | Msa0126750:CDS | 50.0% |
| AGGGATTACCCTTCACCTTC+GGG | - | chr1_3:55841960-55841979 | Msa0126750:CDS | 50.0% | |
| TGTAGTCACCCGAAGGTGAA+GGG | + | chr1_3:55841971-55841990 | None:intergenic | 50.0% | |
| AAGAAGCTGTAGTCACCCGA+AGG | + | chr1_3:55841978-55841997 | None:intergenic | 50.0% | |
| CCAAACCCAATGCGAAACGA+TGG | + | chr1_3:55842120-55842139 | None:intergenic | 50.0% | |
| CCATCGTTTCGCATTGGGTT+TGG | - | chr1_3:55842117-55842136 | Msa0126750:CDS | 50.0% | |
| !! | CATCACCATTGGTTCGCGTT+GGG | + | chr1_3:55842163-55842182 | None:intergenic | 50.0% |
| !! | ACATCACCATTGGTTCGCGT+TGG | + | chr1_3:55842164-55842183 | None:intergenic | 50.0% |
| CATGTGAACCACACCTGAAC+CGG | + | chr1_3:55842216-55842235 | None:intergenic | 50.0% | |
| TTCAGGTGTGGTTCACATGG+TGG | - | chr1_3:55842217-55842236 | Msa0126750:CDS | 50.0% | |
| TCAGGTGTGGTTCACATGGT+GGG | - | chr1_3:55842218-55842237 | Msa0126750:CDS | 50.0% | |
| !! | ACATGGTGGGTGGTATAGCA+GGG | - | chr1_3:55842231-55842250 | Msa0126750:CDS | 50.0% |
| TGGGTGGTATAGCAGGGTTA+TGG | - | chr1_3:55842237-55842256 | Msa0126750:CDS | 50.0% | |
| GGGTGGTATAGCAGGGTTAT+GGG | - | chr1_3:55842238-55842257 | Msa0126750:CDS | 50.0% | |
| GGTGGTATAGCAGGGTTATG+GGG | - | chr1_3:55842239-55842258 | Msa0126750:CDS | 50.0% | |
| GTGGTATAGCAGGGTTATGG+GGG | - | chr1_3:55842240-55842259 | Msa0126750:CDS | 50.0% | |
| TGGTATAGCAGGGTTATGGG+GGG | - | chr1_3:55842241-55842260 | Msa0126750:CDS | 50.0% | |
| !!! | TTGCGGCGTGGGTTTTGATT+GGG | - | chr1_3:55842660-55842679 | Msa0126750:CDS | 50.0% |
| TGTAACTGCGCAGCCTCTAA+TGG | + | chr1_3:55842722-55842741 | None:intergenic | 50.0% | |
| TTAGAGGCTGCGCAGTTACA+CGG | - | chr1_3:55842722-55842741 | Msa0126750:CDS | 50.0% | |
| TATGGGATAGGGAGGCCATA+TGG | - | chr1_3:55842812-55842831 | Msa0126750:CDS | 50.0% | |
| !! | GATTGTTGATGGGTGGTGGA+GGG | - | chr1_3:55842834-55842853 | Msa0126750:CDS | 50.0% |
| !! | AGGTGCTGGTTATTTGTGGG+TGG | - | chr1_3:55842882-55842901 | Msa0126750:CDS | 50.0% |
| !! | GGTGCTGGTTATTTGTGGGT+GGG | - | chr1_3:55842883-55842902 | Msa0126750:CDS | 50.0% |
| ! | GGGATGGACTTGACTAGACA+TGG | - | chr1_3:55842986-55843005 | Msa0126750:CDS | 50.0% |
| ! | CACACTGAAGGTGCACTGAT+TGG | + | chr1_3:55843139-55843158 | None:intergenic | 50.0% |
| GGTGCATAGGTAGTCTGCAA+CGG | + | chr1_3:55841670-55841689 | None:intergenic | 50.0% | |
| TAGATAGTAGGAGAGGCCAC+CGG | + | chr1_3:55841874-55841893 | None:intergenic | 50.0% | |
| !!! | TTCATCGGCCGCCACTTTTT+CGG | - | chr1_3:55841933-55841952 | Msa0126750:CDS | 50.0% |
| CCCTTAGACCGAAAAAGTGG+CGG | + | chr1_3:55841944-55841963 | None:intergenic | 50.0% | |
| !!! | CCGCCACTTTTTCGGTCTAA+GGG | - | chr1_3:55841941-55841960 | Msa0126750:CDS | 50.0% |
| AGGGATTACCCTTCACCTTC+GGG | - | chr1_3:55841960-55841979 | Msa0126750:CDS | 50.0% | |
| TGTAGTCACCCGAAGGTGAA+GGG | + | chr1_3:55841971-55841990 | None:intergenic | 50.0% | |
| AAGAAGCTGTAGTCACCCGA+AGG | + | chr1_3:55841978-55841997 | None:intergenic | 50.0% | |
| CCAAACCCAATGCGAAACGA+TGG | + | chr1_3:55842120-55842139 | None:intergenic | 50.0% | |
| CCATCGTTTCGCATTGGGTT+TGG | - | chr1_3:55842117-55842136 | Msa0126750:CDS | 50.0% | |
| !! | CATCACCATTGGTTCGCGTT+GGG | + | chr1_3:55842163-55842182 | None:intergenic | 50.0% |
| !! | ACATCACCATTGGTTCGCGT+TGG | + | chr1_3:55842164-55842183 | None:intergenic | 50.0% |
| CATGTGAACCACACCTGAAC+CGG | + | chr1_3:55842216-55842235 | None:intergenic | 50.0% | |
| TTCAGGTGTGGTTCACATGG+TGG | - | chr1_3:55842217-55842236 | Msa0126750:CDS | 50.0% | |
| TCAGGTGTGGTTCACATGGT+GGG | - | chr1_3:55842218-55842237 | Msa0126750:CDS | 50.0% | |
| !! | ACATGGTGGGTGGTATAGCA+GGG | - | chr1_3:55842231-55842250 | Msa0126750:CDS | 50.0% |
| TGGGTGGTATAGCAGGGTTA+TGG | - | chr1_3:55842237-55842256 | Msa0126750:CDS | 50.0% | |
| GGGTGGTATAGCAGGGTTAT+GGG | - | chr1_3:55842238-55842257 | Msa0126750:CDS | 50.0% | |
| GGTGGTATAGCAGGGTTATG+GGG | - | chr1_3:55842239-55842258 | Msa0126750:CDS | 50.0% | |
| GTGGTATAGCAGGGTTATGG+GGG | - | chr1_3:55842240-55842259 | Msa0126750:CDS | 50.0% | |
| TGGTATAGCAGGGTTATGGG+GGG | - | chr1_3:55842241-55842260 | Msa0126750:CDS | 50.0% | |
| !!! | TTGCGGCGTGGGTTTTGATT+GGG | - | chr1_3:55842660-55842679 | Msa0126750:CDS | 50.0% |
| TGTAACTGCGCAGCCTCTAA+TGG | + | chr1_3:55842722-55842741 | None:intergenic | 50.0% | |
| TTAGAGGCTGCGCAGTTACA+CGG | - | chr1_3:55842722-55842741 | Msa0126750:CDS | 50.0% | |
| TATGGGATAGGGAGGCCATA+TGG | - | chr1_3:55842812-55842831 | Msa0126750:CDS | 50.0% | |
| !! | GATTGTTGATGGGTGGTGGA+GGG | - | chr1_3:55842834-55842853 | Msa0126750:CDS | 50.0% |
| !! | AGGTGCTGGTTATTTGTGGG+TGG | - | chr1_3:55842882-55842901 | Msa0126750:CDS | 50.0% |
| !! | GGTGCTGGTTATTTGTGGGT+GGG | - | chr1_3:55842883-55842902 | Msa0126750:CDS | 50.0% |
| ! | GGGATGGACTTGACTAGACA+TGG | - | chr1_3:55842986-55843005 | Msa0126750:CDS | 50.0% |
| ! | CACACTGAAGGTGCACTGAT+TGG | + | chr1_3:55843139-55843158 | None:intergenic | 50.0% |
| GCATAGGTAGTCTGCAACGG+CGG | + | chr1_3:55841667-55841686 | None:intergenic | 55.0% | |
| GCACCCTCCAACAGCTTCAT+CGG | - | chr1_3:55841918-55841937 | Msa0126750:CDS | 55.0% | |
| !!! | GCCGCCACTTTTTCGGTCTA+AGG | - | chr1_3:55841940-55841959 | Msa0126750:CDS | 55.0% |
| CTGTAGTCACCCGAAGGTGA+AGG | + | chr1_3:55841972-55841991 | None:intergenic | 55.0% | |
| ! | CATTGGGTTTGGTCTGCCGA+TGG | - | chr1_3:55842128-55842147 | Msa0126750:CDS | 55.0% |
| ! | GGTTTGGTCTGCCGATGGTT+GGG | - | chr1_3:55842133-55842152 | Msa0126750:CDS | 55.0% |
| !! | TGACTTTGCCGGTTCAGGTG+TGG | - | chr1_3:55842205-55842224 | Msa0126750:CDS | 55.0% |
| CGGTTCAGGTGTGGTTCACA+TGG | - | chr1_3:55842214-55842233 | Msa0126750:CDS | 55.0% | |
| !! | CACATGGTGGGTGGTATAGC+AGG | - | chr1_3:55842230-55842249 | Msa0126750:CDS | 55.0% |
| CTAGAATAGGGCGGTTCGAC+CGG | - | chr1_3:55842279-55842298 | Msa0126750:CDS | 55.0% | |
| GGCCGGTCTGTTGCATTGAA+AGG | - | chr1_3:55842305-55842324 | Msa0126750:CDS | 55.0% | |
| GAAAGGACATAGCGCGTCGT+TGG | - | chr1_3:55842322-55842341 | Msa0126750:CDS | 55.0% | |
| ! | GGTGTCACAACAACACTGGC+TGG | - | chr1_3:55842482-55842501 | Msa0126750:CDS | 55.0% |
| !! | GTTGCGGCGTGGGTTTTGAT+TGG | - | chr1_3:55842659-55842678 | Msa0126750:CDS | 55.0% |
| !! | CGCATGGGGGGTGTTGTTTA+CGG | - | chr1_3:55842754-55842773 | Msa0126750:CDS | 55.0% |
| !! | GCATGGGGGGTGTTGTTTAC+GGG | - | chr1_3:55842755-55842774 | Msa0126750:CDS | 55.0% |
| ! | GGATTGTTGATGGGTGGTGG+AGG | - | chr1_3:55842833-55842852 | Msa0126750:CDS | 55.0% |
| TGGTGGAGGGAGGTTGTTTG+CGG | - | chr1_3:55842847-55842866 | Msa0126750:CDS | 55.0% | |
| TCGAGGGATGATGAGACTGC+AGG | - | chr1_3:55842965-55842984 | Msa0126750:CDS | 55.0% | |
| CGAGGGATGATGAGACTGCA+GGG | - | chr1_3:55842966-55842985 | Msa0126750:CDS | 55.0% | |
| GGATGATGAGACTGCAGGGA+TGG | - | chr1_3:55842970-55842989 | Msa0126750:CDS | 55.0% | |
| AGTGTGTCTCCCTTCGCCAT+CGG | - | chr1_3:55843097-55843116 | Msa0126750:CDS | 55.0% | |
| GTATCGTGTCCGATGGCGAA+GGG | + | chr1_3:55843109-55843128 | None:intergenic | 55.0% | |
| !! | GAAGGTGCACTGATTGGCAC+CGG | + | chr1_3:55843133-55843152 | None:intergenic | 55.0% |
| GCATAGGTAGTCTGCAACGG+CGG | + | chr1_3:55841667-55841686 | None:intergenic | 55.0% | |
| GCACCCTCCAACAGCTTCAT+CGG | - | chr1_3:55841918-55841937 | Msa0126750:CDS | 55.0% | |
| !!! | GCCGCCACTTTTTCGGTCTA+AGG | - | chr1_3:55841940-55841959 | Msa0126750:CDS | 55.0% |
| CTGTAGTCACCCGAAGGTGA+AGG | + | chr1_3:55841972-55841991 | None:intergenic | 55.0% | |
| ! | CATTGGGTTTGGTCTGCCGA+TGG | - | chr1_3:55842128-55842147 | Msa0126750:CDS | 55.0% |
| ! | GGTTTGGTCTGCCGATGGTT+GGG | - | chr1_3:55842133-55842152 | Msa0126750:CDS | 55.0% |
| !! | TGACTTTGCCGGTTCAGGTG+TGG | - | chr1_3:55842205-55842224 | Msa0126750:CDS | 55.0% |
| CGGTTCAGGTGTGGTTCACA+TGG | - | chr1_3:55842214-55842233 | Msa0126750:CDS | 55.0% | |
| !! | CACATGGTGGGTGGTATAGC+AGG | - | chr1_3:55842230-55842249 | Msa0126750:CDS | 55.0% |
| CTAGAATAGGGCGGTTCGAC+CGG | - | chr1_3:55842279-55842298 | Msa0126750:CDS | 55.0% | |
| GGCCGGTCTGTTGCATTGAA+AGG | - | chr1_3:55842305-55842324 | Msa0126750:CDS | 55.0% | |
| GAAAGGACATAGCGCGTCGT+TGG | - | chr1_3:55842322-55842341 | Msa0126750:CDS | 55.0% | |
| ! | GGTGTCACAACAACACTGGC+TGG | - | chr1_3:55842482-55842501 | Msa0126750:CDS | 55.0% |
| !! | GTTGCGGCGTGGGTTTTGAT+TGG | - | chr1_3:55842659-55842678 | Msa0126750:CDS | 55.0% |
| !! | CGCATGGGGGGTGTTGTTTA+CGG | - | chr1_3:55842754-55842773 | Msa0126750:CDS | 55.0% |
| !! | GCATGGGGGGTGTTGTTTAC+GGG | - | chr1_3:55842755-55842774 | Msa0126750:CDS | 55.0% |
| ! | GGATTGTTGATGGGTGGTGG+AGG | - | chr1_3:55842833-55842852 | Msa0126750:CDS | 55.0% |
| TGGTGGAGGGAGGTTGTTTG+CGG | - | chr1_3:55842847-55842866 | Msa0126750:CDS | 55.0% | |
| TCGAGGGATGATGAGACTGC+AGG | - | chr1_3:55842965-55842984 | Msa0126750:CDS | 55.0% | |
| CGAGGGATGATGAGACTGCA+GGG | - | chr1_3:55842966-55842985 | Msa0126750:CDS | 55.0% | |
| GGATGATGAGACTGCAGGGA+TGG | - | chr1_3:55842970-55842989 | Msa0126750:CDS | 55.0% | |
| AGTGTGTCTCCCTTCGCCAT+CGG | - | chr1_3:55843097-55843116 | Msa0126750:CDS | 55.0% | |
| GTATCGTGTCCGATGGCGAA+GGG | + | chr1_3:55843109-55843128 | None:intergenic | 55.0% | |
| !! | GAAGGTGCACTGATTGGCAC+CGG | + | chr1_3:55843133-55843152 | None:intergenic | 55.0% |
| ! | TTGCGGTGGTGGTGAGGAGT+GGG | + | chr1_3:55841638-55841657 | None:intergenic | 60.0% |
| ! | TTTGCGGTGGTGGTGAGGAG+TGG | + | chr1_3:55841639-55841658 | None:intergenic | 60.0% |
| ! | TTGCGTTTGCGGTGGTGGTG+AGG | + | chr1_3:55841644-55841663 | None:intergenic | 60.0% |
| TGCAACGGCGGTTGCGTTTG+CGG | + | chr1_3:55841655-55841674 | None:intergenic | 60.0% | |
| CATGGCGAAACCGAGCTGCA+TGG | + | chr1_3:55841781-55841800 | None:intergenic | 60.0% | |
| AATGTCCTCGACGCTGCAGC+CGG | - | chr1_3:55841852-55841871 | Msa0126750:CDS | 60.0% | |
| !! | GCTGTTGGAGGGTGCTCCAA+AGG | + | chr1_3:55841913-55841932 | None:intergenic | 60.0% |
| CGGCCGATGAAGCTGTTGGA+GGG | + | chr1_3:55841924-55841943 | None:intergenic | 60.0% | |
| AGTGATACCGGCAGCAGCGA+TGG | + | chr1_3:55842021-55842040 | None:intergenic | 60.0% | |
| GCTGCTGCCGGTATCACTAG+TGG | - | chr1_3:55842023-55842042 | Msa0126750:CDS | 60.0% | |
| ! | GGGTTTGGTCTGCCGATGGT+TGG | - | chr1_3:55842132-55842151 | Msa0126750:CDS | 60.0% |
| !! | ACCATTGGTTCGCGTTGGGC+TGG | + | chr1_3:55842159-55842178 | None:intergenic | 60.0% |
| ! | GGTGTGGTTCACATGGTGGG+TGG | - | chr1_3:55842221-55842240 | Msa0126750:CDS | 60.0% |
| CGGTCGAACCGCCCTATTCT+AGG | + | chr1_3:55842281-55842300 | None:intergenic | 60.0% | |
| ATGCAACAGACCGGCCTGTC+CGG | + | chr1_3:55842301-55842320 | None:intergenic | 60.0% | |
| AGGACATAGCGCGTCGTTGG+TGG | - | chr1_3:55842325-55842344 | Msa0126750:CDS | 60.0% | |
| !! | TAGCGCGTCGTTGGTGGTGT+TGG | - | chr1_3:55842331-55842350 | Msa0126750:CDS | 60.0% |
| !! | AGCGCGTCGTTGGTGGTGTT+GGG | - | chr1_3:55842332-55842351 | Msa0126750:CDS | 60.0% |
| ! | GGTTGGTACGGGTTCAACCC+CGG | - | chr1_3:55842374-55842393 | Msa0126750:CDS | 60.0% |
| CATGGGCCGCGATTGTGTGT+GGG | - | chr1_3:55842633-55842652 | Msa0126750:CDS | 60.0% | |
| !! | TGTGTGGGTTTGTTGCGGCG+TGG | - | chr1_3:55842648-55842667 | Msa0126750:CDS | 60.0% |
| !! | GTGTGGGTTTGTTGCGGCGT+GGG | - | chr1_3:55842649-55842668 | Msa0126750:CDS | 60.0% |
| AGGCTGCGCAGTTACACGGA+GGG | - | chr1_3:55842726-55842745 | Msa0126750:CDS | 60.0% | |
| !! | TGTTGATGGGTGGTGGAGGG+AGG | - | chr1_3:55842837-55842856 | Msa0126750:CDS | 60.0% |
| !! | TGGGTGGGTTACCGTCACGA+TGG | - | chr1_3:55842898-55842917 | Msa0126750:CDS | 60.0% |
| AAGGGAGACACACTCGTGGC+CGG | + | chr1_3:55843091-55843110 | None:intergenic | 60.0% | |
| CGTATCGTGTCCGATGGCGA+AGG | + | chr1_3:55843110-55843129 | None:intergenic | 60.0% | |
| ! | TTGCGGTGGTGGTGAGGAGT+GGG | + | chr1_3:55841638-55841657 | None:intergenic | 60.0% |
| ! | TTTGCGGTGGTGGTGAGGAG+TGG | + | chr1_3:55841639-55841658 | None:intergenic | 60.0% |
| ! | TTGCGTTTGCGGTGGTGGTG+AGG | + | chr1_3:55841644-55841663 | None:intergenic | 60.0% |
| TGCAACGGCGGTTGCGTTTG+CGG | + | chr1_3:55841655-55841674 | None:intergenic | 60.0% | |
| CATGGCGAAACCGAGCTGCA+TGG | + | chr1_3:55841781-55841800 | None:intergenic | 60.0% | |
| AATGTCCTCGACGCTGCAGC+CGG | - | chr1_3:55841852-55841871 | Msa0126750:CDS | 60.0% | |
| !! | GCTGTTGGAGGGTGCTCCAA+AGG | + | chr1_3:55841913-55841932 | None:intergenic | 60.0% |
| CGGCCGATGAAGCTGTTGGA+GGG | + | chr1_3:55841924-55841943 | None:intergenic | 60.0% | |
| AGTGATACCGGCAGCAGCGA+TGG | + | chr1_3:55842021-55842040 | None:intergenic | 60.0% | |
| GCTGCTGCCGGTATCACTAG+TGG | - | chr1_3:55842023-55842042 | Msa0126750:CDS | 60.0% | |
| ! | GGGTTTGGTCTGCCGATGGT+TGG | - | chr1_3:55842132-55842151 | Msa0126750:CDS | 60.0% |
| !! | ACCATTGGTTCGCGTTGGGC+TGG | + | chr1_3:55842159-55842178 | None:intergenic | 60.0% |
| ! | GGTGTGGTTCACATGGTGGG+TGG | - | chr1_3:55842221-55842240 | Msa0126750:CDS | 60.0% |
| CGGTCGAACCGCCCTATTCT+AGG | + | chr1_3:55842281-55842300 | None:intergenic | 60.0% | |
| ATGCAACAGACCGGCCTGTC+CGG | + | chr1_3:55842301-55842320 | None:intergenic | 60.0% | |
| AGGACATAGCGCGTCGTTGG+TGG | - | chr1_3:55842325-55842344 | Msa0126750:CDS | 60.0% | |
| !! | TAGCGCGTCGTTGGTGGTGT+TGG | - | chr1_3:55842331-55842350 | Msa0126750:CDS | 60.0% |
| !! | AGCGCGTCGTTGGTGGTGTT+GGG | - | chr1_3:55842332-55842351 | Msa0126750:CDS | 60.0% |
| ! | GGTTGGTACGGGTTCAACCC+CGG | - | chr1_3:55842374-55842393 | Msa0126750:CDS | 60.0% |
| CATGGGCCGCGATTGTGTGT+GGG | - | chr1_3:55842633-55842652 | Msa0126750:CDS | 60.0% | |
| !! | TGTGTGGGTTTGTTGCGGCG+TGG | - | chr1_3:55842648-55842667 | Msa0126750:CDS | 60.0% |
| !! | GTGTGGGTTTGTTGCGGCGT+GGG | - | chr1_3:55842649-55842668 | Msa0126750:CDS | 60.0% |
| AGGCTGCGCAGTTACACGGA+GGG | - | chr1_3:55842726-55842745 | Msa0126750:CDS | 60.0% | |
| !! | TGTTGATGGGTGGTGGAGGG+AGG | - | chr1_3:55842837-55842856 | Msa0126750:CDS | 60.0% |
| !! | TGGGTGGGTTACCGTCACGA+TGG | - | chr1_3:55842898-55842917 | Msa0126750:CDS | 60.0% |
| AAGGGAGACACACTCGTGGC+CGG | + | chr1_3:55843091-55843110 | None:intergenic | 60.0% | |
| CGTATCGTGTCCGATGGCGA+AGG | + | chr1_3:55843110-55843129 | None:intergenic | 60.0% | |
| GAGGAGTGGGGCTAGGTCTG+TGG | + | chr1_3:55841625-55841644 | None:intergenic | 65.0% | |
| ! | TGGTGGTGAGGAGTGGGGCT+AGG | + | chr1_3:55841632-55841651 | None:intergenic | 65.0% |
| ! | TGCGGTGGTGGTGAGGAGTG+GGG | + | chr1_3:55841637-55841656 | None:intergenic | 65.0% |
| AACGGCGGTTGCGTTTGCGG+TGG | + | chr1_3:55841652-55841671 | None:intergenic | 65.0% | |
| GGTTTCGCCATGCTCTGCGC+AGG | - | chr1_3:55841789-55841808 | Msa0126750:CDS | 65.0% | |
| AACGGAGCCTGCGCAGAGCA+TGG | + | chr1_3:55841799-55841818 | None:intergenic | 65.0% | |
| ! | GGCTGCAGCGTCGAGGACAT+TGG | + | chr1_3:55841853-55841872 | None:intergenic | 65.0% |
| GCGGCCGATGAAGCTGTTGG+AGG | + | chr1_3:55841925-55841944 | None:intergenic | 65.0% | |
| GTGGCGGCCGATGAAGCTGT+TGG | + | chr1_3:55841928-55841947 | None:intergenic | 65.0% | |
| CAGCGATGGCGAAGGCCCAT+TGG | + | chr1_3:55842007-55842026 | None:intergenic | 65.0% | |
| !! | CGTTGGGCTGGCCCAACCAT+CGG | + | chr1_3:55842147-55842166 | None:intergenic | 65.0% |
| GCCAGCCCAACGCGAACCAA+TGG | - | chr1_3:55842155-55842174 | Msa0126750:CDS | 65.0% | |
| ATAGGGCGGTTCGACCGGAC+AGG | - | chr1_3:55842284-55842303 | Msa0126750:CDS | 65.0% | |
| CCACACACAATCGCGGCCCA+TGG | + | chr1_3:55842635-55842654 | None:intergenic | 65.0% | |
| CCATGGGCCGCGATTGTGTG+TGG | - | chr1_3:55842632-55842651 | Msa0126750:CDS | 65.0% | |
| GAGGCTGCGCAGTTACACGG+AGG | - | chr1_3:55842725-55842744 | Msa0126750:CDS | 65.0% | |
| GCGCAGTTACACGGAGGGTG+TGG | - | chr1_3:55842731-55842750 | Msa0126750:CDS | 65.0% | |
| ! | TACACGGAGGGTGTGGCGCA+TGG | - | chr1_3:55842738-55842757 | Msa0126750:CDS | 65.0% |
| ! | ACACGGAGGGTGTGGCGCAT+GGG | - | chr1_3:55842739-55842758 | Msa0126750:CDS | 65.0% |
| AGGGAGGTTGTTTGCGGCGC+AGG | - | chr1_3:55842853-55842872 | Msa0126750:CDS | 65.0% | |
| GAGGTTGTTTGCGGCGCAGG+TGG | - | chr1_3:55842856-55842875 | Msa0126750:CDS | 65.0% | |
| GTTTGCGGCGCAGGTGGTTG+AGG | - | chr1_3:55842862-55842881 | Msa0126750:CDS | 65.0% | |
| GGCGAAGGGAGACACACTCG+TGG | + | chr1_3:55843095-55843114 | None:intergenic | 65.0% | |
| CGCCATCGGACACGATACGC+CGG | - | chr1_3:55843111-55843130 | Msa0126750:CDS | 65.0% | |
| CACCGGCGTATCGTGTCCGA+TGG | + | chr1_3:55843116-55843135 | None:intergenic | 65.0% | |
| GAGGAGTGGGGCTAGGTCTG+TGG | + | chr1_3:55841625-55841644 | None:intergenic | 65.0% | |
| ! | TGGTGGTGAGGAGTGGGGCT+AGG | + | chr1_3:55841632-55841651 | None:intergenic | 65.0% |
| ! | TGCGGTGGTGGTGAGGAGTG+GGG | + | chr1_3:55841637-55841656 | None:intergenic | 65.0% |
| AACGGCGGTTGCGTTTGCGG+TGG | + | chr1_3:55841652-55841671 | None:intergenic | 65.0% | |
| GGTTTCGCCATGCTCTGCGC+AGG | - | chr1_3:55841789-55841808 | Msa0126750:CDS | 65.0% | |
| AACGGAGCCTGCGCAGAGCA+TGG | + | chr1_3:55841799-55841818 | None:intergenic | 65.0% | |
| ! | GGCTGCAGCGTCGAGGACAT+TGG | + | chr1_3:55841853-55841872 | None:intergenic | 65.0% |
| GCGGCCGATGAAGCTGTTGG+AGG | + | chr1_3:55841925-55841944 | None:intergenic | 65.0% | |
| GTGGCGGCCGATGAAGCTGT+TGG | + | chr1_3:55841928-55841947 | None:intergenic | 65.0% | |
| CAGCGATGGCGAAGGCCCAT+TGG | + | chr1_3:55842007-55842026 | None:intergenic | 65.0% | |
| !! | CGTTGGGCTGGCCCAACCAT+CGG | + | chr1_3:55842147-55842166 | None:intergenic | 65.0% |
| GCCAGCCCAACGCGAACCAA+TGG | - | chr1_3:55842155-55842174 | Msa0126750:CDS | 65.0% | |
| ATAGGGCGGTTCGACCGGAC+AGG | - | chr1_3:55842284-55842303 | Msa0126750:CDS | 65.0% | |
| CCACACACAATCGCGGCCCA+TGG | + | chr1_3:55842635-55842654 | None:intergenic | 65.0% | |
| CCATGGGCCGCGATTGTGTG+TGG | - | chr1_3:55842632-55842651 | Msa0126750:CDS | 65.0% | |
| GAGGCTGCGCAGTTACACGG+AGG | - | chr1_3:55842725-55842744 | Msa0126750:CDS | 65.0% | |
| GCGCAGTTACACGGAGGGTG+TGG | - | chr1_3:55842731-55842750 | Msa0126750:CDS | 65.0% | |
| ! | TACACGGAGGGTGTGGCGCA+TGG | - | chr1_3:55842738-55842757 | Msa0126750:CDS | 65.0% |
| ! | ACACGGAGGGTGTGGCGCAT+GGG | - | chr1_3:55842739-55842758 | Msa0126750:CDS | 65.0% |
| AGGGAGGTTGTTTGCGGCGC+AGG | - | chr1_3:55842853-55842872 | Msa0126750:CDS | 65.0% | |
| GAGGTTGTTTGCGGCGCAGG+TGG | - | chr1_3:55842856-55842875 | Msa0126750:CDS | 65.0% | |
| GTTTGCGGCGCAGGTGGTTG+AGG | - | chr1_3:55842862-55842881 | Msa0126750:CDS | 65.0% | |
| GGCGAAGGGAGACACACTCG+TGG | + | chr1_3:55843095-55843114 | None:intergenic | 65.0% | |
| CGCCATCGGACACGATACGC+CGG | - | chr1_3:55843111-55843130 | Msa0126750:CDS | 65.0% | |
| CACCGGCGTATCGTGTCCGA+TGG | + | chr1_3:55843116-55843135 | None:intergenic | 65.0% | |
| GGCGGTTGCGTTTGCGGTGG+TGG | + | chr1_3:55841649-55841668 | None:intergenic | 70.0% | |
| GCCTTCGCCATCGCTGCTGC+CGG | - | chr1_3:55842011-55842030 | Msa0126750:CDS | 70.0% | |
| ACCGGCAGCAGCGATGGCGA+AGG | + | chr1_3:55842015-55842034 | None:intergenic | 70.0% | |
| ! | CACGGAGGGTGTGGCGCATG+GGG | - | chr1_3:55842740-55842759 | Msa0126750:CDS | 70.0% |
| ! | ACGGAGGGTGTGGCGCATGG+GGG | - | chr1_3:55842741-55842760 | Msa0126750:CDS | 70.0% |
| GGCGCAGGTGGTTGAGGTGC+TGG | - | chr1_3:55842868-55842887 | Msa0126750:CDS | 70.0% | |
| GGCGGTTGCGTTTGCGGTGG+TGG | + | chr1_3:55841649-55841668 | None:intergenic | 70.0% | |
| GCCTTCGCCATCGCTGCTGC+CGG | - | chr1_3:55842011-55842030 | Msa0126750:CDS | 70.0% | |
| ACCGGCAGCAGCGATGGCGA+AGG | + | chr1_3:55842015-55842034 | None:intergenic | 70.0% | |
| ! | CACGGAGGGTGTGGCGCATG+GGG | - | chr1_3:55842740-55842759 | Msa0126750:CDS | 70.0% |
| ! | ACGGAGGGTGTGGCGCATGG+GGG | - | chr1_3:55842741-55842760 | Msa0126750:CDS | 70.0% |
| GGCGCAGGTGGTTGAGGTGC+TGG | - | chr1_3:55842868-55842887 | Msa0126750:CDS | 70.0% | |
| GTCCTCGACGCTGCAGCCGG+TGG | - | chr1_3:55841855-55841874 | Msa0126750:CDS | 75.0% | |
| GGCGGTTCGACCGGACAGGC+CGG | - | chr1_3:55842288-55842307 | Msa0126750:CDS | 75.0% | |
| ! | CGGAGGGTGTGGCGCATGGG+GGG | - | chr1_3:55842742-55842761 | Msa0126750:CDS | 75.0% |
| GTCCTCGACGCTGCAGCCGG+TGG | - | chr1_3:55841855-55841874 | Msa0126750:CDS | 75.0% | |
| GGCGGTTCGACCGGACAGGC+CGG | - | chr1_3:55842288-55842307 | Msa0126750:CDS | 75.0% | |
| ! | CGGAGGGTGTGGCGCATGGG+GGG | - | chr1_3:55842742-55842761 | Msa0126750:CDS | 75.0% |
| !! | GGCCACCGGCTGCAGCGTCG+AGG | + | chr1_3:55841860-55841879 | None:intergenic | 80.0% |
| !! | GGCCACCGGCTGCAGCGTCG+AGG | + | chr1_3:55841860-55841879 | None:intergenic | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 55841600 | 55843159 | 55841600 | ID=Msa0126750;Name=Msa0126750 |
| chr1_3 | mRNA | 55841600 | 55843159 | 55841600 | ID=Msa0126750-mRNA-1;Parent=Msa0126750;Name=Msa0126750-mRNA-1;_AED=0.29;_eAED=0.29;_QI=0|-1|0|1|-1|1|1|0|519 |
| chr1_3 | exon | 55841600 | 55843159 | 55841600 | ID=Msa0126750-mRNA-1:exon:17471;Parent=Msa0126750-mRNA-1 |
| chr1_3 | CDS | 55841600 | 55843159 | 55841600 | ID=Msa0126750-mRNA-1:cds;Parent=Msa0126750-mRNA-1 |
| Gene Sequence |
| Protein sequence |
