Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911190 | AES69829.1 | 53.269 | 413 | 38 | 8 | 1 | 282 | 1 | 389 | 2.18e-102 | 328 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911190 | sp|P07135|RR7_SOYBN | 93.750 | 80 | 5 | 0 | 124 | 203 | 45 | 124 | 7.98e-46 | 154 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0126730 | Msa0911190 | 0.800353 | 1.500092e-48 | -8.615850e-47 |
| Msa0126750 | Msa0911190 | 0.811091 | 8.326715e-51 | -8.615850e-47 |
| Msa0202640 | Msa0911190 | 0.816298 | 5.945080e-52 | -8.615850e-47 |
| Msa0405420 | Msa0911190 | 0.836026 | 1.191098e-56 | -8.615850e-47 |
| Msa0405430 | Msa0911190 | 0.840125 | 1.049669e-57 | -8.615850e-47 |
| Msa0405440 | Msa0911190 | 0.910058 | 2.861570e-82 | -8.615850e-47 |
| Msa0405510 | Msa0911190 | 0.826522 | 2.591057e-54 | -8.615850e-47 |
| Msa0405520 | Msa0911190 | 0.809239 | 2.087647e-50 | -8.615850e-47 |
| Msa0405530 | Msa0911190 | 0.925701 | 1.283885e-90 | -8.615850e-47 |
| Msa0263770 | Msa0911190 | 0.873621 | 1.275484e-67 | -8.615850e-47 |
| Msa0268210 | Msa0911190 | 0.817834 | 2.684531e-52 | -8.615850e-47 |
| Msa0268260 | Msa0911190 | 0.832668 | 8.289192e-56 | -8.615850e-47 |
| Msa0268270 | Msa0911190 | 0.907843 | 3.267204e-81 | -8.615850e-47 |
| Msa0268300 | Msa0911190 | 0.870804 | 1.106089e-66 | -8.615850e-47 |
| Msa0268310 | Msa0911190 | 0.807580 | 4.716417e-50 | -8.615850e-47 |
| Msa0268450 | Msa0911190 | 0.814818 | 1.269146e-51 | -8.615850e-47 |
| Msa0268570 | Msa0911190 | 0.828468 | 8.843541e-55 | -8.615850e-47 |
| Msa0268630 | Msa0911190 | 0.815817 | 7.612144e-52 | -8.615850e-47 |
| Msa0268670 | Msa0911190 | 0.804559 | 2.037938e-49 | -8.615850e-47 |
| Msa0268750 | Msa0911190 | 0.837721 | 4.397101e-57 | -8.615850e-47 |
| Msa0268830 | Msa0911190 | 0.832955 | 7.033776e-56 | -8.615850e-47 |
| Msa0268880 | Msa0911190 | 0.819258 | 1.276430e-52 | -8.615850e-47 |
| Msa0268960 | Msa0911190 | 0.850011 | 2.236720e-60 | -8.615850e-47 |
| Msa0269040 | Msa0911190 | 0.816721 | 4.778245e-52 | -8.615850e-47 |
| Msa0269090 | Msa0911190 | 0.801741 | 7.802440e-49 | -8.615850e-47 |
| Msa0269140 | Msa0911190 | 0.851429 | 8.925423e-61 | -8.615850e-47 |
| Msa0269150 | Msa0911190 | 0.924889 | 3.847579e-90 | -8.615850e-47 |
| Msa0484040 | Msa0911190 | 0.809513 | 1.823591e-50 | -8.615850e-47 |
| Msa0582510 | Msa0911190 | 0.822385 | 2.437240e-53 | -8.615850e-47 |
| Msa0582650 | Msa0911190 | 0.828143 | 1.059256e-54 | -8.615850e-47 |
| Msa0582690 | Msa0911190 | 0.828333 | 9.528569e-55 | -8.615850e-47 |
| Msa0582770 | Msa0911190 | 0.836823 | 7.463850e-57 | -8.615850e-47 |
| Msa0582810 | Msa0911190 | 0.829781 | 4.248865e-55 | -8.615850e-47 |
| Msa0582920 | Msa0911190 | 0.839418 | 1.603586e-57 | -8.615850e-47 |
| Msa0591310 | Msa0911190 | 0.834371 | 3.115686e-56 | -8.615850e-47 |
| Msa0591350 | Msa0911190 | 0.887525 | 1.322262e-72 | -8.615850e-47 |
| Msa0591360 | Msa0911190 | 0.825794 | 3.860546e-54 | -8.615850e-47 |
| Msa0867680 | Msa0911190 | 0.871254 | 7.858461e-67 | -8.615850e-47 |
| Msa0867690 | Msa0911190 | 0.817767 | 2.779680e-52 | -8.615850e-47 |
| Msa0876520 | Msa0911190 | 0.829487 | 5.007835e-55 | -8.615850e-47 |
| Msa0908220 | Msa0911190 | 0.822760 | 1.993809e-53 | -8.615850e-47 |
| Msa0908230 | Msa0911190 | 0.865254 | 6.747740e-65 | -8.615850e-47 |
| Msa0908240 | Msa0911190 | 0.922181 | 1.372968e-88 | -8.615850e-47 |
| Msa0908310 | Msa0911190 | 0.883999 | 2.787436e-71 | -8.615850e-47 |
| Msa0908320 | Msa0911190 | 0.824065 | 9.877808e-54 | -8.615850e-47 |
| Msa0908370 | Msa0911190 | 0.897249 | 1.689144e-76 | -8.615850e-47 |
| Msa0908380 | Msa0911190 | 0.803175 | 3.952279e-49 | -8.615850e-47 |
| Msa0908430 | Msa0911190 | 0.838473 | 2.817051e-57 | -8.615850e-47 |
| Msa0908440 | Msa0911190 | 0.868131 | 8.200703e-66 | -8.615850e-47 |
| Msa0908450 | Msa0911190 | 0.911414 | 6.250595e-83 | -8.615850e-47 |
| Msa0908480 | Msa0911190 | 0.844228 | 8.607696e-59 | -8.615850e-47 |
| Msa0908530 | Msa0911190 | 0.889859 | 1.660294e-73 | -8.615850e-47 |
| Msa0908540 | Msa0911190 | 0.822958 | 1.792982e-53 | -8.615850e-47 |
| Msa0908590 | Msa0911190 | 0.814232 | 1.711092e-51 | -8.615850e-47 |
| Msa0908600 | Msa0911190 | 0.817367 | 3.421550e-52 | -8.615850e-47 |
| Msa0908610 | Msa0911190 | 0.906010 | 2.341206e-80 | -8.615850e-47 |
| Msa0908650 | Msa0911190 | 0.811224 | 7.791625e-51 | -8.615850e-47 |
| Msa0908660 | Msa0911190 | 0.840732 | 7.283297e-58 | -8.615850e-47 |
| Msa0908670 | Msa0911190 | 0.909843 | 3.634966e-82 | -8.615850e-47 |
| Msa0908720 | Msa0911190 | 0.881776 | 1.811755e-70 | -8.615850e-47 |
| Msa0908730 | Msa0911190 | 0.815095 | 1.102075e-51 | -8.615850e-47 |
| Msa0911190 | Msa0911200 | 0.836188 | 1.083363e-56 | -8.615850e-47 |
| Msa0911190 | Msa0911230 | 0.907456 | 4.969877e-81 | -8.615850e-47 |
| Msa0911190 | Msa0924830 | 0.833311 | 5.736630e-56 | -8.615850e-47 |
| Msa0911190 | Msa0924880 | 0.832005 | 1.209717e-55 | -8.615850e-47 |
| Msa0911190 | Msa0924920 | 0.888986 | 3.626808e-73 | -8.615850e-47 |
| Msa0911190 | Msa0924930 | 0.837428 | 5.227362e-57 | -8.615850e-47 |
| Msa0911190 | Msa0924940 | 0.833196 | 6.126606e-56 | -8.615850e-47 |
| Msa0911190 | Msa0925100 | 0.916432 | 1.795043e-85 | -8.615850e-47 |
| Msa0911190 | Msa0925110 | 0.852999 | 3.191884e-61 | -8.615850e-47 |
| Msa0911190 | Msa0931070 | 0.802700 | 4.954013e-49 | -8.615850e-47 |
| Msa0911190 | Msa0931130 | 0.810521 | 1.106314e-50 | -8.615850e-47 |
| Msa0911190 | Msa0931230 | 0.817061 | 4.007934e-52 | -8.615850e-47 |
| Msa0911190 | Msa0931260 | 0.832652 | 8.363347e-56 | -8.615850e-47 |
| Msa0911190 | Msa0983630 | 0.867469 | 1.337273e-65 | -8.615850e-47 |
| Msa0911190 | Msa0983640 | 0.809139 | 2.193575e-50 | -8.615850e-47 |
| Msa0911190 | Msa1022050 | 0.877635 | 5.365144e-69 | -8.615850e-47 |
| Msa0911190 | Msa1022060 | 0.823992 | 1.027155e-53 | -8.615850e-47 |
| Msa0911190 | Msa1064410 | 0.848831 | 4.769802e-60 | -8.615850e-47 |
| Msa0911190 | Msa1086090 | 0.836987 | 6.781016e-57 | -8.615850e-47 |
| Msa0911190 | Msa1086140 | 0.803009 | 4.276840e-49 | -8.615850e-47 |
| Msa0911190 | Msa1086200 | 0.842067 | 3.242638e-58 | -8.615850e-47 |
| Msa0911190 | Msa1086320 | 0.815808 | 7.645553e-52 | -8.615850e-47 |
| Msa0911190 | Msa1086550 | 0.821678 | 3.553618e-53 | -8.615850e-47 |
| Msa0911190 | Msa1086600 | 0.842679 | 2.232178e-58 | -8.615850e-47 |
| Msa0911190 | Msa1086720 | 0.839925 | 1.183700e-57 | -8.615850e-47 |
| Msa0911190 | Msa1086730 | 0.848821 | 4.800718e-60 | -8.615850e-47 |
| Msa0911190 | Msa1086740 | 0.919068 | 7.137964e-87 | -8.615850e-47 |
| Msa0911190 | Msa1086790 | 0.909766 | 3.959632e-82 | -8.615850e-47 |
| Msa0911190 | Msa1086800 | 0.830744 | 2.471057e-55 | -8.615850e-47 |
| Msa0911190 | Msa1086900 | 0.839561 | 1.472037e-57 | -8.615850e-47 |
| Msa0911190 | Msa1086960 | 0.907787 | 3.474479e-81 | -8.615850e-47 |
| Msa0911190 | Msa1086970 | 0.811393 | 7.159725e-51 | -8.615850e-47 |
| Msa0911190 | Msa1087030 | 0.815554 | 8.709103e-52 | -8.615850e-47 |
| Msa0911190 | Msa1087040 | 0.824870 | 6.386831e-54 | -8.615850e-47 |
| Msa0911190 | Msa1087050 | 0.898771 | 3.826538e-77 | -8.615850e-47 |
| Msa0911190 | Msa1087110 | 0.910332 | 2.109434e-82 | -8.615850e-47 |
| Msa0911190 | Msa1087120 | 0.820606 | 6.276648e-53 | -8.615850e-47 |
| Msa0911190 | Msa1143120 | 0.820781 | 5.720898e-53 | -8.615850e-47 |
| Msa0911190 | Msa1143170 | 0.833693 | 4.605568e-56 | -8.615850e-47 |
| Msa0911190 | Msa1354420 | 0.896787 | 2.636395e-76 | -8.615850e-47 |
| Msa0911190 | Msa1354430 | 0.831021 | 2.114160e-55 | -8.615850e-47 |
| Msa0911190 | Msa1354480 | 0.809785 | 1.593982e-50 | -8.615850e-47 |
| Msa0911190 | Msa1354490 | 0.849837 | 2.501629e-60 | -8.615850e-47 |
| Msa0911190 | Msa1354500 | 0.926414 | 4.848988e-91 | -8.615850e-47 |
| Msa0911190 | Msa1354550 | 0.891551 | 3.581529e-74 | -8.615850e-47 |
| Msa0911190 | Msa1354560 | 0.835983 | 1.220949e-56 | -8.615850e-47 |
| Msa0911190 | Msa1354610 | 0.838879 | 2.211930e-57 | -8.615850e-47 |
| Msa0911190 | Msa1354620 | 0.851641 | 7.775355e-61 | -8.615850e-47 |
| Msa0911190 | Msa1354630 | 0.922173 | 1.387564e-88 | -8.615850e-47 |
| Msa0911190 | Msa1354680 | 0.924744 | 4.675700e-90 | -8.615850e-47 |
| Msa0911190 | Msa1354690 | 0.842456 | 2.558342e-58 | -8.615850e-47 |
| Msa0911190 | Msa1354700 | 0.817663 | 2.933619e-52 | -8.615850e-47 |
| Msa0911190 | Msa1354740 | 0.840473 | 8.513393e-58 | -8.615850e-47 |
| Msa0911190 | Msa1354750 | 0.848808 | 4.840313e-60 | -8.615850e-47 |
| Msa0911190 | Msa1354760 | 0.924650 | 5.306973e-90 | -8.615850e-47 |
| Msa0911190 | Msa1354810 | 0.884877 | 1.317053e-71 | -8.615850e-47 |
| Msa0911190 | Msa1354820 | 0.826683 | 2.370893e-54 | -8.615850e-47 |
| Msa0911190 | Msa1354920 | 0.838789 | 2.333467e-57 | -8.615850e-47 |
| Msa0911190 | Msa1354980 | 0.884300 | 2.158045e-71 | -8.615850e-47 |
| Msa0911190 | Msa1354990 | 0.815318 | 9.829020e-52 | -8.615850e-47 |
| Msa0911190 | Msa1355090 | 0.827568 | 1.456079e-54 | -8.615850e-47 |
| Msa0911190 | Msa1365890 | 0.882694 | 8.400081e-71 | -8.615850e-47 |
| Msa0911190 | Msa1365900 | 0.808083 | 3.685975e-50 | -8.615850e-47 |
| Msa0911190 | Msa1365950 | 0.823069 | 1.688967e-53 | -8.615850e-47 |
| Msa0911190 | Msa1365970 | 0.896489 | 3.513288e-76 | -8.615850e-47 |
| Msa0911190 | Msa1366080 | 0.868395 | 6.740175e-66 | -8.615850e-47 |
| Msa0911190 | Msa1368230 | 0.834081 | 3.683853e-56 | -8.615850e-47 |
| Msa0911190 | Msa1368240 | 0.903391 | 3.641054e-79 | -8.615850e-47 |
| Msa0911190 | Msa1385410 | 0.867204 | 1.625868e-65 | -8.615850e-47 |
| Msa0911190 | Msa1391090 | 0.808148 | 3.570604e-50 | -8.615850e-47 |
| Msa0911190 | Msa1391100 | 0.830492 | 2.848613e-55 | -8.615850e-47 |
| Msa0911190 | Msa1391110 | 0.897616 | 1.183009e-76 | -8.615850e-47 |
| Msa0911190 | Msa1391160 | 0.844863 | 5.807199e-59 | -8.615850e-47 |
| Msa0911190 | Msa1391170 | 0.800018 | 1.754642e-48 | -8.615850e-47 |
| Msa0911190 | Msa1391220 | 0.828412 | 9.120490e-55 | -8.615850e-47 |
| Msa0911190 | Msa1391240 | 0.908439 | 1.707557e-81 | -8.615850e-47 |
| Msa0911190 | Msa1394030 | 0.842603 | 2.337995e-58 | -8.615850e-47 |
| Msa0911190 | Msa1394040 | 0.806551 | 7.784818e-50 | -8.615850e-47 |
| Msa0911190 | Msa1394150 | 0.803527 | 3.341007e-49 | -8.615850e-47 |
| Msa0911190 | Msa1394160 | 0.825042 | 5.814921e-54 | -8.615850e-47 |
| Msa0911190 | Msa1394210 | 0.811918 | 5.503812e-51 | -8.615850e-47 |
| Msa0911190 | Msa1460120 | 0.861822 | 7.832880e-64 | -8.615850e-47 |
| Msa0911190 | Msa1460130 | 0.833034 | 6.723424e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911190 | MtrunA17_CPg0492421 | 85.366 | 82 | 10 | 1 | 124 | 203 | 45 | 126 | 1.36e-40 | 138 |
| Msa0911190 | MtrunA17_Chr4g0016101 | 85.366 | 82 | 10 | 1 | 124 | 203 | 45 | 126 | 1.36e-40 | 138 |
| Msa0911190 | MtrunA17_Chr3g0090841 | 85.366 | 82 | 10 | 1 | 124 | 203 | 45 | 126 | 1.36e-40 | 138 |
| Msa0911190 | MtrunA17_CPg0492431 | 97.015 | 67 | 2 | 0 | 216 | 282 | 1 | 67 | 2.43e-37 | 133 |
| Msa0911190 | MtrunA17_Chr3g0090851 | 97.015 | 67 | 2 | 0 | 216 | 282 | 1 | 67 | 2.43e-37 | 133 |
| Msa0911190 | MtrunA17_Chr4g0016091 | 97.015 | 67 | 2 | 0 | 216 | 282 | 1 | 67 | 2.43e-37 | 133 |
| Msa0911190 | MtrunA17_CPg0492401 | 77.083 | 48 | 7 | 1 | 45 | 88 | 1 | 48 | 9.23e-18 | 75.1 |
| Msa0911190 | MtrunA17_Chr7g0234981 | 65.957 | 47 | 16 | 0 | 89 | 135 | 47 | 93 | 2.66e-12 | 61.6 |
| Msa0911190 | MtrunA17_Chr4g0002541 | 70.000 | 40 | 12 | 0 | 124 | 163 | 21 | 60 | 7.59e-11 | 57.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0911190 | ATCG00900.1 | 91.250 | 80 | 7 | 0 | 124 | 203 | 45 | 124 | 6.19e-46 | 152 |
| Msa0911190 | ATCG01240.1 | 91.250 | 80 | 7 | 0 | 124 | 203 | 45 | 124 | 6.19e-46 | 152 |
| Msa0911190 | ATCG00905.1 | 72.340 | 47 | 13 | 0 | 89 | 135 | 39 | 85 | 8.44e-15 | 68.6 |
| Msa0911190 | ATCG01230.1 | 72.340 | 47 | 13 | 0 | 89 | 135 | 39 | 85 | 8.44e-15 | 68.6 |
Find 48 sgRNAs with CRISPR-Local
Find 386 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGCCATTCGTTGGTTATT+AGG | 0.268444 | 6_2:+17383379 | Msa0911190:CDS |
| CATCAAGTTCCCGTTGAAAT+AGG | 0.307921 | 6_2:+17383337 | Msa0911190:CDS |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 6_2:+17382030 | Msa0911190:CDS |
| AGATACCCGCTTTCGTGCTT+TGG | 0.338855 | 6_2:-17382371 | None:intergenic |
| AAAACGTCCAGGTCGAAATA+TGG | 0.358545 | 6_2:+17383411 | Msa0911190:CDS |
| AACCTATGTTGTATATTAAG+AGG | 0.361677 | 6_2:+17381959 | Msa0911190:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 6_2:-17382963 | None:intergenic |
| TTTGGCAGCATCCACTAATT+CGG | 0.404543 | 6_2:-17383449 | None:intergenic |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 6_2:-17382990 | None:intergenic |
| GCTTGACGTAAAACAGATAG+TGG | 0.426676 | 6_2:-17383256 | None:intergenic |
| GTAAAAGCAAGACGCGTAAA+CGG | 0.427761 | 6_2:+17383307 | Msa0911190:CDS |
| TACCCGCTTTCGTGCTTTGG+TGG | 0.452970 | 6_2:-17382368 | None:intergenic |
| TGTGTGGATCCTATTTCAAC+GGG | 0.470768 | 6_2:-17383346 | None:intergenic |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | 6_2:-17381862 | None:intergenic |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 6_2:-17382022 | None:intergenic |
| AAATGGATAAATCAAAACTA+AGG | 0.493334 | 6_2:+17381794 | None:intergenic |
| ACCCGCTTTCGTGCTTTGGT+GGG | 0.499056 | 6_2:-17382367 | None:intergenic |
| GATCGTTGGCACAAGAAAGA+AGG | 0.502174 | 6_2:-17381836 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 6_2:-17382962 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 6_2:+17382963 | Msa0911190:CDS |
| TTATCTATCGAGCTATGAAA+AGG | 0.512086 | 6_2:+17383209 | Msa0911190:intron |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | 6_2:-17381850 | None:intergenic |
| AAAACTAAGGCAAGATGAGA+TGG | 0.524079 | 6_2:+17381807 | Msa0911190:CDS |
| GAAAAGCACTTGCCATTCGT+TGG | 0.526859 | 6_2:+17383371 | Msa0911190:CDS |
| TAACGGCGCTGTTGTTTCGA+TGG | 0.544639 | 6_2:+17383993 | Msa0911190:CDS |
| TTGTGTGGATCCTATTTCAA+CGG | 0.548545 | 6_2:-17383347 | None:intergenic |
| ACCCACCAAAGCACGAAAGC+GGG | 0.549035 | 6_2:+17382366 | Msa0911190:CDS |
| ATCGAAAAGAAGCAAATGAA+AGG | 0.561694 | 6_2:-17383840 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 6_2:+17382890 | Msa0911190:intron |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 6_2:+17382937 | Msa0911190:CDS |
| ATCGTTGGCACAAGAAAGAA+GGG | 0.587101 | 6_2:-17381835 | None:intergenic |
| GACCCACCAAAGCACGAAAG+CGG | 0.587922 | 6_2:+17382365 | Msa0911190:CDS |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 6_2:+17382038 | Msa0911190:CDS |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 6_2:+17382891 | Msa0911190:intron |
| AACCTCTTAATATACAACAT+AGG | 0.594876 | 6_2:-17381961 | None:intergenic |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 6_2:+17382976 | Msa0911190:CDS |
| TTGAAAGCCATATTTCGACC+TGG | 0.605724 | 6_2:-17383418 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 6_2:+17382955 | Msa0911190:CDS |
| TGCGCCTAATAACCAACGAA+TGG | 0.620213 | 6_2:-17383383 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 6_2:-17382012 | None:intergenic |
| ATTGTACCATCCTAAAAGCA+AGG | 0.638231 | 6_2:-17381989 | None:intergenic |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 6_2:+17382913 | Msa0911190:CDS |
| AAGTTTAGTAATGAGCATAA+CGG | 0.644237 | 6_2:+17383976 | Msa0911190:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 6_2:+17382892 | Msa0911190:intron |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 6_2:-17382931 | None:intergenic |
| TTTACGTCAAGCAATACGTG+GGG | 0.729232 | 6_2:+17383267 | Msa0911190:CDS |
| GTTGAAATAGGATCCACACA+AGG | 0.731975 | 6_2:+17383349 | Msa0911190:CDS |
| GTACCATCCTAAAAGCAAGG+AGG | 0.768564 | 6_2:-17381986 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381928-17381947 | None:intergenic | 100.0% |
| ! | CGGGGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381928-17381947 | None:intergenic | 100.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | + | chr6_2:17382215-17382234 | Msa0911190:intron | 15.0% |
| !! | TGAGAATAATAAAAAAAGAA+AGG | + | chr6_2:17382565-17382584 | Msa0911190:intron | 15.0% |
| !!! | CATTTTTTTATAACTTATAG+GGG | - | chr6_2:17383046-17383065 | None:intergenic | 15.0% |
| !!! | CCATTTTTTTATAACTTATA+GGG | - | chr6_2:17383047-17383066 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTTATAACTTAT+AGG | - | chr6_2:17383048-17383067 | None:intergenic | 15.0% |
| !! | AATAAATAAAGAGGAATATT+TGG | + | chr6_2:17383722-17383741 | Msa0911190:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | + | chr6_2:17382215-17382234 | Msa0911190:intron | 15.0% |
| !! | TGAGAATAATAAAAAAAGAA+AGG | + | chr6_2:17382565-17382584 | Msa0911190:intron | 15.0% |
| !!! | CATTTTTTTATAACTTATAG+GGG | - | chr6_2:17383046-17383065 | None:intergenic | 15.0% |
| !!! | CCATTTTTTTATAACTTATA+GGG | - | chr6_2:17383047-17383066 | None:intergenic | 15.0% |
| !!! | TCCATTTTTTTATAACTTAT+AGG | - | chr6_2:17383048-17383067 | None:intergenic | 15.0% |
| !! | AATAAATAAAGAGGAATATT+TGG | + | chr6_2:17383722-17383741 | Msa0911190:intron | 15.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | + | chr6_2:17382621-17382640 | Msa0911190:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | + | chr6_2:17382622-17382641 | Msa0911190:intron | 20.0% |
| !! | CCCTATAAGTTATAAAAAAA+TGG | + | chr6_2:17383044-17383063 | Msa0911190:intron | 20.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | + | chr6_2:17383619-17383638 | Msa0911190:intron | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | + | chr6_2:17383713-17383732 | Msa0911190:intron | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | + | chr6_2:17383733-17383752 | Msa0911190:intron | 20.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | + | chr6_2:17382621-17382640 | Msa0911190:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | + | chr6_2:17382622-17382641 | Msa0911190:intron | 20.0% |
| !! | CCCTATAAGTTATAAAAAAA+TGG | + | chr6_2:17383044-17383063 | Msa0911190:intron | 20.0% |
| !! | AGAATCAATAGAAAAAGAAT+CGG | + | chr6_2:17383619-17383638 | Msa0911190:intron | 20.0% |
| !! | TTGCTTAAGAATAAATAAAG+AGG | + | chr6_2:17383713-17383732 | Msa0911190:intron | 20.0% |
| !!! | AGGAATATTTGGTATTTTTT+TGG | + | chr6_2:17383733-17383752 | Msa0911190:intron | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | - | chr6_2:17381899-17381918 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | - | chr6_2:17381900-17381919 | None:intergenic | 25.0% |
| !! | TATACAACATAGGTTTTTCA+GGG | - | chr6_2:17381954-17381973 | None:intergenic | 25.0% |
| !! | ATATACAACATAGGTTTTTC+AGG | - | chr6_2:17381955-17381974 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | + | chr6_2:17381959-17381978 | Msa0911190:CDS | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | - | chr6_2:17381964-17381983 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | - | chr6_2:17382101-17382120 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | + | chr6_2:17382323-17382342 | Msa0911190:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | + | chr6_2:17382399-17382418 | Msa0911190:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | + | chr6_2:17382400-17382419 | Msa0911190:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | + | chr6_2:17382467-17382486 | Msa0911190:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | + | chr6_2:17382477-17382496 | Msa0911190:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | - | chr6_2:17382540-17382559 | None:intergenic | 25.0% |
| !!! | AAAAAAGAAAGGTGTTCAAT+TGG | + | chr6_2:17382576-17382595 | Msa0911190:intron | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | - | chr6_2:17382676-17382695 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | - | chr6_2:17382876-17382895 | None:intergenic | 25.0% |
| !! | GGGGCTAAAATAATTTATTT+TGG | - | chr6_2:17383027-17383046 | None:intergenic | 25.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | - | chr6_2:17383133-17383152 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | + | chr6_2:17383141-17383160 | Msa0911190:intron | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | - | chr6_2:17383171-17383190 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | - | chr6_2:17383605-17383624 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | - | chr6_2:17383892-17383911 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | + | chr6_2:17383976-17383995 | Msa0911190:CDS | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | - | chr6_2:17381899-17381918 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | - | chr6_2:17381900-17381919 | None:intergenic | 25.0% |
| !! | TATACAACATAGGTTTTTCA+GGG | - | chr6_2:17381954-17381973 | None:intergenic | 25.0% |
| !! | ATATACAACATAGGTTTTTC+AGG | - | chr6_2:17381955-17381974 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | + | chr6_2:17381959-17381978 | Msa0911190:CDS | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | - | chr6_2:17381964-17381983 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | - | chr6_2:17382101-17382120 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | + | chr6_2:17382323-17382342 | Msa0911190:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | + | chr6_2:17382399-17382418 | Msa0911190:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | + | chr6_2:17382400-17382419 | Msa0911190:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | + | chr6_2:17382467-17382486 | Msa0911190:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | + | chr6_2:17382477-17382496 | Msa0911190:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | - | chr6_2:17382540-17382559 | None:intergenic | 25.0% |
| !!! | AAAAAAGAAAGGTGTTCAAT+TGG | + | chr6_2:17382576-17382595 | Msa0911190:intron | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | - | chr6_2:17382676-17382695 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | - | chr6_2:17382876-17382895 | None:intergenic | 25.0% |
| !! | GGGGCTAAAATAATTTATTT+TGG | - | chr6_2:17383027-17383046 | None:intergenic | 25.0% |
| ! | ACTAATCGATTACGATAAAT+TGG | - | chr6_2:17383133-17383152 | None:intergenic | 25.0% |
| !! | TAATCGATTAGTTAACATGT+TGG | + | chr6_2:17383141-17383160 | Msa0911190:intron | 25.0% |
| !! | TTTTTCCGTGTTTCATAATA+CGG | - | chr6_2:17383171-17383190 | None:intergenic | 25.0% |
| !! | GATTCTTTTCCAATTATGTA+TGG | - | chr6_2:17383605-17383624 | None:intergenic | 25.0% |
| ! | GAAGAATTAGACCAAAAATT+AGG | - | chr6_2:17383892-17383911 | None:intergenic | 25.0% |
| ! | AAGTTTAGTAATGAGCATAA+CGG | + | chr6_2:17383976-17383995 | Msa0911190:CDS | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | - | chr6_2:17381894-17381913 | None:intergenic | 30.0% |
| ! | CAATTGGATCTAAAATTGAC+GGG | - | chr6_2:17382456-17382475 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | - | chr6_2:17382457-17382476 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | + | chr6_2:17382455-17382474 | Msa0911190:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | - | chr6_2:17382472-17382491 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | + | chr6_2:17382470-17382489 | Msa0911190:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | + | chr6_2:17382476-17382495 | Msa0911190:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | - | chr6_2:17382866-17382885 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | + | chr6_2:17382890-17382909 | Msa0911190:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | + | chr6_2:17382992-17383011 | Msa0911190:intron | 30.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | - | chr6_2:17383119-17383138 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | - | chr6_2:17383128-17383147 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | + | chr6_2:17383163-17383182 | Msa0911190:intron | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | + | chr6_2:17383177-17383196 | Msa0911190:intron | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | + | chr6_2:17383209-17383228 | Msa0911190:intron | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | - | chr6_2:17383299-17383318 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | + | chr6_2:17383438-17383457 | Msa0911190:intron | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | + | chr6_2:17383577-17383596 | Msa0911190:intron | 30.0% | |
| TATGGATCCATACATAACAT+AGG | - | chr6_2:17383587-17383606 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | + | chr6_2:17383593-17383612 | Msa0911190:intron | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | + | chr6_2:17383667-17383686 | Msa0911190:intron | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | - | chr6_2:17383843-17383862 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | + | chr6_2:17383842-17383861 | Msa0911190:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | + | chr6_2:17383859-17383878 | Msa0911190:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | - | chr6_2:17383881-17383900 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | - | chr6_2:17383933-17383952 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | + | chr6_2:17383933-17383952 | Msa0911190:CDS | 30.0% | |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | - | chr6_2:17381894-17381913 | None:intergenic | 30.0% |
| ! | CAATTGGATCTAAAATTGAC+GGG | - | chr6_2:17382456-17382475 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | - | chr6_2:17382457-17382476 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | + | chr6_2:17382455-17382474 | Msa0911190:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | - | chr6_2:17382472-17382491 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | + | chr6_2:17382470-17382489 | Msa0911190:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | + | chr6_2:17382476-17382495 | Msa0911190:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | - | chr6_2:17382866-17382885 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | + | chr6_2:17382890-17382909 | Msa0911190:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | + | chr6_2:17382992-17383011 | Msa0911190:intron | 30.0% |
| ! | ATAAATTGGATCGGATTTTG+CGG | - | chr6_2:17383119-17383138 | None:intergenic | 30.0% |
| TCGATTACGATAAATTGGAT+CGG | - | chr6_2:17383128-17383147 | None:intergenic | 30.0% | |
| GTTAACCGTATTATGAAACA+CGG | + | chr6_2:17383163-17383182 | Msa0911190:intron | 30.0% | |
| GAAACACGGAAAAAAATCAT+TGG | + | chr6_2:17383177-17383196 | Msa0911190:intron | 30.0% | |
| TTATCTATCGAGCTATGAAA+AGG | + | chr6_2:17383209-17383228 | Msa0911190:intron | 30.0% | |
| !! | TCTTGCTTTTACTGCTATAT+CGG | - | chr6_2:17383299-17383318 | None:intergenic | 30.0% |
| CAAATTAAGTTCCGAATTAG+TGG | + | chr6_2:17383438-17383457 | Msa0911190:intron | 30.0% | |
| ACATAGACCTATGTTATGTA+TGG | + | chr6_2:17383577-17383596 | Msa0911190:intron | 30.0% | |
| TATGGATCCATACATAACAT+AGG | - | chr6_2:17383587-17383606 | None:intergenic | 30.0% | |
| TGTATGGATCCATACATAAT+TGG | + | chr6_2:17383593-17383612 | Msa0911190:intron | 30.0% | |
| GAAAGACGAAATAGAAATGA+TGG | + | chr6_2:17383667-17383686 | Msa0911190:intron | 30.0% | |
| ATCGAAAAGAAGCAAATGAA+AGG | - | chr6_2:17383843-17383862 | None:intergenic | 30.0% | |
| ! | TTTCATTTGCTTCTTTTCGA+TGG | + | chr6_2:17383842-17383861 | Msa0911190:CDS | 30.0% |
| !!! | CGATGGAAGTTTTATTTTTC+CGG | + | chr6_2:17383859-17383878 | Msa0911190:CDS | 30.0% |
| CCAAAAATTAGGATCAATTC+CGG | - | chr6_2:17383881-17383900 | None:intergenic | 30.0% | |
| ! | AGATAGATCTTTTTGATCAG+AGG | - | chr6_2:17383933-17383952 | None:intergenic | 30.0% |
| CTGATCAAAAAGATCTATCT+TGG | + | chr6_2:17383933-17383952 | Msa0911190:CDS | 30.0% | |
| AAAACTAAGGCAAGATGAGA+TGG | + | chr6_2:17381807-17381826 | Msa0911190:CDS | 35.0% | |
| ATTGTACCATCCTAAAAGCA+AGG | - | chr6_2:17381992-17382011 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | + | chr6_2:17382254-17382273 | Msa0911190:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | - | chr6_2:17382282-17382301 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | + | chr6_2:17382454-17382473 | Msa0911190:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | + | chr6_2:17382626-17382645 | Msa0911190:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | + | chr6_2:17382678-17382697 | Msa0911190:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | - | chr6_2:17382706-17382725 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | + | chr6_2:17382708-17382727 | Msa0911190:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | - | chr6_2:17382776-17382795 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | - | chr6_2:17382786-17382805 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | - | chr6_2:17382787-17382806 | None:intergenic | 35.0% |
| ACTTTATGTAAGGCAGAGTT+TGG | - | chr6_2:17382796-17382815 | None:intergenic | 35.0% | |
| TACTCTGGCAACTTTATGTA+AGG | - | chr6_2:17382806-17382825 | None:intergenic | 35.0% | |
| GAAATCACTGCTTATATACC+CGG | + | chr6_2:17382844-17382863 | Msa0911190:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | - | chr6_2:17382865-17382884 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | + | chr6_2:17382889-17382908 | Msa0911190:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | + | chr6_2:17382891-17382910 | Msa0911190:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | - | chr6_2:17382993-17383012 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | + | chr6_2:17382991-17383010 | Msa0911190:intron | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | + | chr6_2:17382993-17383012 | Msa0911190:intron | 35.0% |
| ! | TTTTACGTCAAGCAATACGT+GGG | + | chr6_2:17383266-17383285 | Msa0911190:CDS | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | - | chr6_2:17383298-17383317 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | - | chr6_2:17383350-17383369 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | + | chr6_2:17383495-17383514 | Msa0911190:intron | 35.0% | |
| ! | ATTTTCGATAATCCTTGAGC+AGG | + | chr6_2:17383542-17383561 | Msa0911190:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | + | chr6_2:17383878-17383897 | Msa0911190:CDS | 35.0% |
| AAAACTAAGGCAAGATGAGA+TGG | + | chr6_2:17381807-17381826 | Msa0911190:CDS | 35.0% | |
| ATTGTACCATCCTAAAAGCA+AGG | - | chr6_2:17381992-17382011 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | + | chr6_2:17382254-17382273 | Msa0911190:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | - | chr6_2:17382282-17382301 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | + | chr6_2:17382454-17382473 | Msa0911190:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | + | chr6_2:17382626-17382645 | Msa0911190:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | + | chr6_2:17382678-17382697 | Msa0911190:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | - | chr6_2:17382706-17382725 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | + | chr6_2:17382708-17382727 | Msa0911190:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | - | chr6_2:17382776-17382795 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | - | chr6_2:17382786-17382805 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | - | chr6_2:17382787-17382806 | None:intergenic | 35.0% |
| ACTTTATGTAAGGCAGAGTT+TGG | - | chr6_2:17382796-17382815 | None:intergenic | 35.0% | |
| TACTCTGGCAACTTTATGTA+AGG | - | chr6_2:17382806-17382825 | None:intergenic | 35.0% | |
| GAAATCACTGCTTATATACC+CGG | + | chr6_2:17382844-17382863 | Msa0911190:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | - | chr6_2:17382865-17382884 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | + | chr6_2:17382889-17382908 | Msa0911190:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | + | chr6_2:17382891-17382910 | Msa0911190:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | - | chr6_2:17382993-17383012 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | + | chr6_2:17382991-17383010 | Msa0911190:intron | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | + | chr6_2:17382993-17383012 | Msa0911190:intron | 35.0% |
| ! | TTTTACGTCAAGCAATACGT+GGG | + | chr6_2:17383266-17383285 | Msa0911190:CDS | 35.0% |
| !! | CTTGCTTTTACTGCTATATC+GGG | - | chr6_2:17383298-17383317 | None:intergenic | 35.0% |
| TTGTGTGGATCCTATTTCAA+CGG | - | chr6_2:17383350-17383369 | None:intergenic | 35.0% | |
| AAAGGAAGAGACTCATAGAA+TGG | + | chr6_2:17383495-17383514 | Msa0911190:intron | 35.0% | |
| ! | ATTTTCGATAATCCTTGAGC+AGG | + | chr6_2:17383542-17383561 | Msa0911190:intron | 35.0% |
| ! | CCGGAATTGATCCTAATTTT+TGG | + | chr6_2:17383878-17383897 | Msa0911190:CDS | 35.0% |
| ATCGTTGGCACAAGAAAGAA+GGG | - | chr6_2:17381838-17381857 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | - | chr6_2:17381853-17381872 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | + | chr6_2:17381858-17381877 | Msa0911190:intron | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | - | chr6_2:17381865-17381884 | None:intergenic | 40.0% | |
| !!! | ACATAGGTTTTTCAGGGTCT+CGG | - | chr6_2:17381948-17381967 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | - | chr6_2:17382066-17382085 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | + | chr6_2:17382065-17382084 | Msa0911190:intron | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | + | chr6_2:17382383-17382402 | Msa0911190:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | - | chr6_2:17382412-17382431 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | - | chr6_2:17382433-17382452 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | + | chr6_2:17382631-17382650 | Msa0911190:intron | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | - | chr6_2:17382785-17382804 | None:intergenic | 40.0% |
| AGCAGTGATTTCAAATCCAG+AGG | - | chr6_2:17382836-17382855 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | + | chr6_2:17382850-17382869 | Msa0911190:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | + | chr6_2:17382892-17382911 | Msa0911190:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | - | chr6_2:17382934-17382953 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | + | chr6_2:17382937-17382956 | Msa0911190:CDS | 40.0% | |
| GCTTGACGTAAAACAGATAG+TGG | - | chr6_2:17383259-17383278 | None:intergenic | 40.0% | |
| ! | GTTTTACGTCAAGCAATACG+TGG | + | chr6_2:17383265-17383284 | Msa0911190:CDS | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | + | chr6_2:17383267-17383286 | Msa0911190:CDS | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | + | chr6_2:17383307-17383326 | Msa0911190:CDS | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | + | chr6_2:17383337-17383356 | Msa0911190:CDS | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | - | chr6_2:17383349-17383368 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | + | chr6_2:17383349-17383368 | Msa0911190:CDS | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | + | chr6_2:17383379-17383398 | Msa0911190:CDS | 40.0% |
| ! | ATTTCGACCTGGACGTTTTT+GGG | - | chr6_2:17383410-17383429 | None:intergenic | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+TGG | - | chr6_2:17383411-17383430 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | + | chr6_2:17383411-17383430 | Msa0911190:CDS | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | - | chr6_2:17383421-17383440 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | - | chr6_2:17383452-17383471 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | + | chr6_2:17383452-17383471 | Msa0911190:intron | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | - | chr6_2:17383488-17383507 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+AGG | - | chr6_2:17383557-17383576 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | + | chr6_2:17383686-17383705 | Msa0911190:intron | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | + | chr6_2:17383687-17383706 | Msa0911190:intron | 40.0% |
| ATCGTTGGCACAAGAAAGAA+GGG | - | chr6_2:17381838-17381857 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | - | chr6_2:17381853-17381872 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | + | chr6_2:17381858-17381877 | Msa0911190:intron | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | - | chr6_2:17381865-17381884 | None:intergenic | 40.0% | |
| !!! | ACATAGGTTTTTCAGGGTCT+CGG | - | chr6_2:17381948-17381967 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | - | chr6_2:17382066-17382085 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | + | chr6_2:17382065-17382084 | Msa0911190:intron | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | + | chr6_2:17382383-17382402 | Msa0911190:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | - | chr6_2:17382412-17382431 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | - | chr6_2:17382433-17382452 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | + | chr6_2:17382631-17382650 | Msa0911190:intron | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | - | chr6_2:17382785-17382804 | None:intergenic | 40.0% |
| AGCAGTGATTTCAAATCCAG+AGG | - | chr6_2:17382836-17382855 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | + | chr6_2:17382850-17382869 | Msa0911190:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | + | chr6_2:17382892-17382911 | Msa0911190:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | - | chr6_2:17382934-17382953 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | + | chr6_2:17382937-17382956 | Msa0911190:CDS | 40.0% | |
| GCTTGACGTAAAACAGATAG+TGG | - | chr6_2:17383259-17383278 | None:intergenic | 40.0% | |
| ! | GTTTTACGTCAAGCAATACG+TGG | + | chr6_2:17383265-17383284 | Msa0911190:CDS | 40.0% |
| TTTACGTCAAGCAATACGTG+GGG | + | chr6_2:17383267-17383286 | Msa0911190:CDS | 40.0% | |
| GTAAAAGCAAGACGCGTAAA+CGG | + | chr6_2:17383307-17383326 | Msa0911190:CDS | 40.0% | |
| CATCAAGTTCCCGTTGAAAT+AGG | + | chr6_2:17383337-17383356 | Msa0911190:CDS | 40.0% | |
| TGTGTGGATCCTATTTCAAC+GGG | - | chr6_2:17383349-17383368 | None:intergenic | 40.0% | |
| GTTGAAATAGGATCCACACA+AGG | + | chr6_2:17383349-17383368 | Msa0911190:CDS | 40.0% | |
| ! | CTTGCCATTCGTTGGTTATT+AGG | + | chr6_2:17383379-17383398 | Msa0911190:CDS | 40.0% |
| ! | ATTTCGACCTGGACGTTTTT+GGG | - | chr6_2:17383410-17383429 | None:intergenic | 40.0% |
| ! | TATTTCGACCTGGACGTTTT+TGG | - | chr6_2:17383411-17383430 | None:intergenic | 40.0% |
| AAAACGTCCAGGTCGAAATA+TGG | + | chr6_2:17383411-17383430 | Msa0911190:CDS | 40.0% | |
| TTGAAAGCCATATTTCGACC+TGG | - | chr6_2:17383421-17383440 | None:intergenic | 40.0% | |
| TTTGGCAGCATCCACTAATT+CGG | - | chr6_2:17383452-17383471 | None:intergenic | 40.0% | |
| ! | AATTAGTGGATGCTGCCAAA+GGG | + | chr6_2:17383452-17383471 | Msa0911190:intron | 40.0% |
| ! | AGTCTCTTCCTTTTTGCGTA+TGG | - | chr6_2:17383488-17383507 | None:intergenic | 40.0% |
| GTGTATATAGATCCTGCTCA+AGG | - | chr6_2:17383557-17383576 | None:intergenic | 40.0% | |
| ! | ATGGCTCAACTAAGCACTTT+TGG | + | chr6_2:17383686-17383705 | Msa0911190:intron | 40.0% |
| ! | TGGCTCAACTAAGCACTTTT+GGG | + | chr6_2:17383687-17383706 | Msa0911190:intron | 40.0% |
| GATCGTTGGCACAAGAAAGA+AGG | - | chr6_2:17381839-17381858 | None:intergenic | 45.0% | |
| !!! | ATAGGTTTTTCAGGGTCTCG+GGG | - | chr6_2:17381946-17381965 | None:intergenic | 45.0% |
| !!! | CATAGGTTTTTCAGGGTCTC+GGG | - | chr6_2:17381947-17381966 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | + | chr6_2:17381979-17381998 | Msa0911190:CDS | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | + | chr6_2:17381983-17382002 | Msa0911190:CDS | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | - | chr6_2:17381989-17382008 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | - | chr6_2:17382037-17382056 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | - | chr6_2:17382038-17382057 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | - | chr6_2:17382039-17382058 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | + | chr6_2:17382038-17382057 | Msa0911190:CDS | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | + | chr6_2:17382487-17382506 | Msa0911190:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | + | chr6_2:17382648-17382667 | Msa0911190:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | + | chr6_2:17382721-17382740 | Msa0911190:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | + | chr6_2:17382896-17382915 | Msa0911190:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | + | chr6_2:17382897-17382916 | Msa0911190:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | + | chr6_2:17382913-17382932 | Msa0911190:CDS | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | - | chr6_2:17382965-17382984 | None:intergenic | 45.0% | |
| ! | TCCCTTTTACGCTCATGTCA+CGG | + | chr6_2:17383071-17383090 | Msa0911190:intron | 45.0% |
| !! | GAAAAGCACTTGCCATTCGT+TGG | + | chr6_2:17383371-17383390 | Msa0911190:CDS | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | - | chr6_2:17383386-17383405 | None:intergenic | 45.0% | |
| ! | GAATTAGTGGATGCTGCCAA+AGG | + | chr6_2:17383451-17383470 | Msa0911190:intron | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | + | chr6_2:17383501-17383520 | Msa0911190:intron | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | + | chr6_2:17383688-17383707 | Msa0911190:intron | 45.0% |
| GATCGTTGGCACAAGAAAGA+AGG | - | chr6_2:17381839-17381858 | None:intergenic | 45.0% | |
| !!! | ATAGGTTTTTCAGGGTCTCG+GGG | - | chr6_2:17381946-17381965 | None:intergenic | 45.0% |
| !!! | CATAGGTTTTTCAGGGTCTC+GGG | - | chr6_2:17381947-17381966 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | + | chr6_2:17381979-17381998 | Msa0911190:CDS | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | + | chr6_2:17381983-17382002 | Msa0911190:CDS | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | - | chr6_2:17381989-17382008 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | - | chr6_2:17382037-17382056 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | - | chr6_2:17382038-17382057 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | - | chr6_2:17382039-17382058 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | + | chr6_2:17382038-17382057 | Msa0911190:CDS | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | + | chr6_2:17382487-17382506 | Msa0911190:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | + | chr6_2:17382648-17382667 | Msa0911190:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | + | chr6_2:17382721-17382740 | Msa0911190:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | + | chr6_2:17382896-17382915 | Msa0911190:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | + | chr6_2:17382897-17382916 | Msa0911190:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | + | chr6_2:17382913-17382932 | Msa0911190:CDS | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | - | chr6_2:17382965-17382984 | None:intergenic | 45.0% | |
| ! | TCCCTTTTACGCTCATGTCA+CGG | + | chr6_2:17383071-17383090 | Msa0911190:intron | 45.0% |
| !! | GAAAAGCACTTGCCATTCGT+TGG | + | chr6_2:17383371-17383390 | Msa0911190:CDS | 45.0% |
| TGCGCCTAATAACCAACGAA+TGG | - | chr6_2:17383386-17383405 | None:intergenic | 45.0% | |
| ! | GAATTAGTGGATGCTGCCAA+AGG | + | chr6_2:17383451-17383470 | Msa0911190:intron | 45.0% |
| AGAGACTCATAGAATGGCAG+AGG | + | chr6_2:17383501-17383520 | Msa0911190:intron | 45.0% | |
| ! | GGCTCAACTAAGCACTTTTG+GGG | + | chr6_2:17383688-17383707 | Msa0911190:intron | 45.0% |
| !!! | TAGGTTTTTCAGGGTCTCGG+GGG | - | chr6_2:17381945-17381964 | None:intergenic | 50.0% |
| AGATACCCGCTTTCGTGCTT+TGG | - | chr6_2:17382374-17382393 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | + | chr6_2:17382415-17382434 | Msa0911190:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | + | chr6_2:17382690-17382709 | Msa0911190:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | + | chr6_2:17382729-17382748 | Msa0911190:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | - | chr6_2:17382821-17382840 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | + | chr6_2:17382903-17382922 | Msa0911190:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | - | chr6_2:17382966-17382985 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | + | chr6_2:17382963-17382982 | Msa0911190:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | + | chr6_2:17382976-17382995 | Msa0911190:CDS | 50.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | - | chr6_2:17383075-17383094 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | - | chr6_2:17383365-17383384 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | - | chr6_2:17383470-17383489 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | + | chr6_2:17383477-17383496 | Msa0911190:intron | 50.0% | |
| !! | TAACGGCGCTGTTGTTTCGA+TGG | + | chr6_2:17383993-17384012 | Msa0911190:CDS | 50.0% |
| !!! | TAGGTTTTTCAGGGTCTCGG+GGG | - | chr6_2:17381945-17381964 | None:intergenic | 50.0% |
| AGATACCCGCTTTCGTGCTT+TGG | - | chr6_2:17382374-17382393 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | + | chr6_2:17382415-17382434 | Msa0911190:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | + | chr6_2:17382690-17382709 | Msa0911190:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | + | chr6_2:17382729-17382748 | Msa0911190:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | - | chr6_2:17382821-17382840 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | + | chr6_2:17382903-17382922 | Msa0911190:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | - | chr6_2:17382966-17382985 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | + | chr6_2:17382963-17382982 | Msa0911190:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | + | chr6_2:17382976-17382995 | Msa0911190:CDS | 50.0% | |
| GCCGTGACATGAGCGTAAAA+GGG | - | chr6_2:17383075-17383094 | None:intergenic | 50.0% | |
| ! | GGCAAGTGCTTTTCCTTGTG+TGG | - | chr6_2:17383365-17383384 | None:intergenic | 50.0% |
| TATGGCATCGCCATTCCCTT+TGG | - | chr6_2:17383470-17383489 | None:intergenic | 50.0% | |
| TGGCGATGCCATACGCAAAA+AGG | + | chr6_2:17383477-17383496 | Msa0911190:intron | 50.0% | |
| !! | TAACGGCGCTGTTGTTTCGA+TGG | + | chr6_2:17383993-17384012 | Msa0911190:CDS | 50.0% |
| !!! | AGGTTTTTCAGGGTCTCGGG+GGG | - | chr6_2:17381944-17381963 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | + | chr6_2:17382365-17382384 | Msa0911190:CDS | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | + | chr6_2:17382366-17382385 | Msa0911190:CDS | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | - | chr6_2:17382370-17382389 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | - | chr6_2:17382371-17382390 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | + | chr6_2:17382817-17382836 | Msa0911190:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | + | chr6_2:17382955-17382974 | Msa0911190:CDS | 55.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | - | chr6_2:17383076-17383095 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | + | chr6_2:17383076-17383095 | Msa0911190:intron | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | + | chr6_2:17383457-17383476 | Msa0911190:intron | 55.0% | |
| !!! | AGGTTTTTCAGGGTCTCGGG+GGG | - | chr6_2:17381944-17381963 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | + | chr6_2:17382365-17382384 | Msa0911190:CDS | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | + | chr6_2:17382366-17382385 | Msa0911190:CDS | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | - | chr6_2:17382370-17382389 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | - | chr6_2:17382371-17382390 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | + | chr6_2:17382817-17382836 | Msa0911190:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | + | chr6_2:17382955-17382974 | Msa0911190:CDS | 55.0% | |
| CGCCGTGACATGAGCGTAAA+AGG | - | chr6_2:17383076-17383095 | None:intergenic | 55.0% | |
| TTTACGCTCATGTCACGGCG+AGG | + | chr6_2:17383076-17383095 | Msa0911190:intron | 55.0% | |
| GTGGATGCTGCCAAAGGGAA+TGG | + | chr6_2:17383457-17383476 | Msa0911190:intron | 55.0% | |
| !!! | TTTTTCAGGGTCTCGGGGGG+GGG | - | chr6_2:17381941-17381960 | None:intergenic | 60.0% |
| !!! | GTTTTTCAGGGTCTCGGGGG+GGG | - | chr6_2:17381942-17381961 | None:intergenic | 60.0% |
| !!! | GGTTTTTCAGGGTCTCGGGG+GGG | - | chr6_2:17381943-17381962 | None:intergenic | 60.0% |
| GCGAGGAGAAAGGCAGCAAG+AGG | - | chr6_2:17382015-17382034 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | - | chr6_2:17382032-17382051 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | + | chr6_2:17382030-17382049 | Msa0911190:CDS | 60.0% | |
| GGCGCATCCCAAAAACGTCC+AGG | + | chr6_2:17383400-17383419 | Msa0911190:CDS | 60.0% | |
| !!! | TTTTTCAGGGTCTCGGGGGG+GGG | - | chr6_2:17381941-17381960 | None:intergenic | 60.0% |
| !!! | GTTTTTCAGGGTCTCGGGGG+GGG | - | chr6_2:17381942-17381961 | None:intergenic | 60.0% |
| !!! | GGTTTTTCAGGGTCTCGGGG+GGG | - | chr6_2:17381943-17381962 | None:intergenic | 60.0% |
| GCGAGGAGAAAGGCAGCAAG+AGG | - | chr6_2:17382015-17382034 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | - | chr6_2:17382032-17382051 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | + | chr6_2:17382030-17382049 | Msa0911190:CDS | 60.0% | |
| GGCGCATCCCAAAAACGTCC+AGG | + | chr6_2:17383400-17383419 | Msa0911190:CDS | 60.0% | |
| !! | TTTTCAGGGTCTCGGGGGGG+GGG | - | chr6_2:17381940-17381959 | None:intergenic | 65.0% |
| TCGCTGTGGGGCGAGGAGAA+AGG | - | chr6_2:17382025-17382044 | None:intergenic | 65.0% | |
| !! | TTTTCAGGGTCTCGGGGGGG+GGG | - | chr6_2:17381940-17381959 | None:intergenic | 65.0% |
| TCGCTGTGGGGCGAGGAGAA+AGG | - | chr6_2:17382025-17382044 | None:intergenic | 65.0% | |
| TTTCAGGGTCTCGGGGGGGG+GGG | - | chr6_2:17381939-17381958 | None:intergenic | 70.0% | |
| TTTCAGGGTCTCGGGGGGGG+GGG | - | chr6_2:17381939-17381958 | None:intergenic | 70.0% | |
| TTCAGGGTCTCGGGGGGGGG+GGG | - | chr6_2:17381938-17381957 | None:intergenic | 75.0% | |
| TTCAGGGTCTCGGGGGGGGG+GGG | - | chr6_2:17381938-17381957 | None:intergenic | 75.0% | |
| ! | TCAGGGTCTCGGGGGGGGGG+GGG | - | chr6_2:17381937-17381956 | None:intergenic | 80.0% |
| ! | TCAGGGTCTCGGGGGGGGGG+GGG | - | chr6_2:17381937-17381956 | None:intergenic | 80.0% |
| ! | AGGGTCTCGGGGGGGGGGGG+GGG | - | chr6_2:17381935-17381954 | None:intergenic | 85.0% |
| ! | CAGGGTCTCGGGGGGGGGGG+GGG | - | chr6_2:17381936-17381955 | None:intergenic | 85.0% |
| ! | AGGGTCTCGGGGGGGGGGGG+GGG | - | chr6_2:17381935-17381954 | None:intergenic | 85.0% |
| ! | CAGGGTCTCGGGGGGGGGGG+GGG | - | chr6_2:17381936-17381955 | None:intergenic | 85.0% |
| ! | TCTCGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381931-17381950 | None:intergenic | 90.0% |
| ! | GTCTCGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381932-17381951 | None:intergenic | 90.0% |
| ! | GGTCTCGGGGGGGGGGGGGG+GGG | - | chr6_2:17381933-17381952 | None:intergenic | 90.0% |
| ! | GGGTCTCGGGGGGGGGGGGG+GGG | - | chr6_2:17381934-17381953 | None:intergenic | 90.0% |
| ! | TCTCGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381931-17381950 | None:intergenic | 90.0% |
| ! | GTCTCGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381932-17381951 | None:intergenic | 90.0% |
| ! | GGTCTCGGGGGGGGGGGGGG+GGG | - | chr6_2:17381933-17381952 | None:intergenic | 90.0% |
| ! | GGGTCTCGGGGGGGGGGGGG+GGG | - | chr6_2:17381934-17381953 | None:intergenic | 90.0% |
| ! | TCGGGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381929-17381948 | None:intergenic | 95.0% |
| ! | CTCGGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381930-17381949 | None:intergenic | 95.0% |
| ! | TCGGGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381929-17381948 | None:intergenic | 95.0% |
| ! | CTCGGGGGGGGGGGGGGGGG+GGG | - | chr6_2:17381930-17381949 | None:intergenic | 95.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 17381796 | 17384033 | 17381796 | ID=Msa0911190;Name=Msa0911190 |
| chr6_2 | mRNA | 17381796 | 17384033 | 17381796 | ID=Msa0911190-mRNA-1;Parent=Msa0911190;Name=Msa0911190-mRNA-1;_AED=0.28;_eAED=0.34;_QI=0|0|0|1|0|0|6|0|282 |
| chr6_2 | exon | 17381796 | 17381872 | 17381796 | ID=Msa0911190-mRNA-1:exon:3663;Parent=Msa0911190-mRNA-1 |
| chr6_2 | exon | 17381909 | 17382068 | 17381909 | ID=Msa0911190-mRNA-1:exon:3664;Parent=Msa0911190-mRNA-1 |
| chr6_2 | exon | 17382345 | 17382387 | 17382345 | ID=Msa0911190-mRNA-1:exon:3665;Parent=Msa0911190-mRNA-1 |
| chr6_2 | exon | 17382905 | 17382997 | 17382905 | ID=Msa0911190-mRNA-1:exon:3666;Parent=Msa0911190-mRNA-1 |
| chr6_2 | exon | 17383221 | 17383456 | 17383221 | ID=Msa0911190-mRNA-1:exon:3667;Parent=Msa0911190-mRNA-1 |
| chr6_2 | exon | 17383797 | 17384033 | 17383797 | ID=Msa0911190-mRNA-1:exon:3668;Parent=Msa0911190-mRNA-1 |
| chr6_2 | CDS | 17381796 | 17381872 | 17381796 | ID=Msa0911190-mRNA-1:cds;Parent=Msa0911190-mRNA-1 |
| chr6_2 | CDS | 17381909 | 17382068 | 17381909 | ID=Msa0911190-mRNA-1:cds;Parent=Msa0911190-mRNA-1 |
| chr6_2 | CDS | 17382345 | 17382387 | 17382345 | ID=Msa0911190-mRNA-1:cds;Parent=Msa0911190-mRNA-1 |
| chr6_2 | CDS | 17382905 | 17382997 | 17382905 | ID=Msa0911190-mRNA-1:cds;Parent=Msa0911190-mRNA-1 |
| chr6_2 | CDS | 17383221 | 17383456 | 17383221 | ID=Msa0911190-mRNA-1:cds;Parent=Msa0911190-mRNA-1 |
| chr6_2 | CDS | 17383797 | 17384033 | 17383797 | ID=Msa0911190-mRNA-1:cds;Parent=Msa0911190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
