Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405440 | AES79107.1 | 77.215 | 158 | 28 | 2 | 1 | 152 | 40 | 195 | 7.30e-74 | 229 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405440 | sp|A4GYN8|RR12B_POPTR | 94.845 | 97 | 5 | 0 | 56 | 152 | 39 | 135 | 4.79e-60 | 185 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405440 | G7L078 | 77.215 | 158 | 28 | 2 | 1 | 152 | 40 | 195 | 3.48e-74 | 229 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0126750 | Msa0405440 | 0.820731 | 5.873401e-53 | -8.615850e-47 |
| Msa0202640 | Msa0405440 | 0.811531 | 6.681156e-51 | -8.615850e-47 |
| Msa0405420 | Msa0405440 | 0.864044 | 1.613958e-64 | -8.615850e-47 |
| Msa0405430 | Msa0405440 | 0.883163 | 5.661468e-71 | -8.615850e-47 |
| Msa0405440 | Msa0405510 | 0.852006 | 6.127288e-61 | -8.615850e-47 |
| Msa0405440 | Msa0405520 | 0.849636 | 2.846691e-60 | -8.615850e-47 |
| Msa0405440 | Msa0405530 | 0.939307 | 1.583807e-99 | -8.615850e-47 |
| Msa0405440 | Msa0582510 | 0.818088 | 2.352369e-52 | -8.615850e-47 |
| Msa0405440 | Msa0582650 | 0.817246 | 3.642084e-52 | -8.615850e-47 |
| Msa0405440 | Msa0582690 | 0.825417 | 4.741702e-54 | -8.615850e-47 |
| Msa0405440 | Msa0582760 | 0.802848 | 4.618254e-49 | -8.615850e-47 |
| Msa0405440 | Msa0582770 | 0.827338 | 1.652880e-54 | -8.615850e-47 |
| Msa0405440 | Msa0582810 | 0.818831 | 1.596092e-52 | -8.615850e-47 |
| Msa0405440 | Msa0582920 | 0.830744 | 2.470817e-55 | -8.615850e-47 |
| Msa0405440 | Msa0591290 | 0.822530 | 2.254882e-53 | -8.615850e-47 |
| Msa0405440 | Msa0591310 | 0.864341 | 1.303965e-64 | -8.615850e-47 |
| Msa0405440 | Msa0591350 | 0.888310 | 6.615721e-73 | -8.615850e-47 |
| Msa0405440 | Msa0591360 | 0.837147 | 6.169901e-57 | -8.615850e-47 |
| Msa0405440 | Msa0591380 | 0.820969 | 5.180132e-53 | -8.615850e-47 |
| Msa0405440 | Msa0844260 | 0.802362 | 5.817247e-49 | -8.615850e-47 |
| Msa0405440 | Msa0867680 | 0.860137 | 2.546921e-63 | -8.615850e-47 |
| Msa0405440 | Msa0867690 | 0.844470 | 7.410722e-59 | -8.615850e-47 |
| Msa0405440 | Msa0876520 | 0.854873 | 9.210244e-62 | -8.615850e-47 |
| Msa0405440 | Msa0908220 | 0.830896 | 2.268636e-55 | -8.615850e-47 |
| Msa0405440 | Msa0908230 | 0.868467 | 6.391719e-66 | -8.615850e-47 |
| Msa0405440 | Msa0908240 | 0.938287 | 8.626007e-99 | -8.615850e-47 |
| Msa0405440 | Msa0908310 | 0.884434 | 1.923571e-71 | -8.615850e-47 |
| Msa0405440 | Msa0908320 | 0.840149 | 1.034716e-57 | -8.615850e-47 |
| Msa0405440 | Msa0908370 | 0.881393 | 2.491435e-70 | -8.615850e-47 |
| Msa0405440 | Msa0908380 | 0.830078 | 3.595321e-55 | -8.615850e-47 |
| Msa0405440 | Msa0908430 | 0.859643 | 3.589252e-63 | -8.615850e-47 |
| Msa0405440 | Msa0908440 | 0.871919 | 4.733328e-67 | -8.615850e-47 |
| Msa0405440 | Msa0908450 | 0.925758 | 1.188249e-90 | -8.615850e-47 |
| Msa0405440 | Msa0908480 | 0.847015 | 1.510683e-59 | -8.615850e-47 |
| Msa0405440 | Msa0908530 | 0.893176 | 8.016697e-75 | -8.615850e-47 |
| Msa0405440 | Msa0908540 | 0.840055 | 1.094825e-57 | -8.615850e-47 |
| Msa0405440 | Msa0908590 | 0.851491 | 8.571713e-61 | -8.615850e-47 |
| Msa0405440 | Msa0908600 | 0.838372 | 2.990144e-57 | -8.615850e-47 |
| Msa0405440 | Msa0908610 | 0.905807 | 2.905520e-80 | -8.615850e-47 |
| Msa0405440 | Msa0908650 | 0.845570 | 3.740470e-59 | -8.615850e-47 |
| Msa0405440 | Msa0908660 | 0.834095 | 3.654732e-56 | -8.615850e-47 |
| Msa0405440 | Msa0908670 | 0.913353 | 6.793512e-84 | -8.615850e-47 |
| Msa0405440 | Msa0908720 | 0.890681 | 7.905559e-74 | -8.615850e-47 |
| Msa0405440 | Msa0908730 | 0.823587 | 1.278533e-53 | -8.615850e-47 |
| Msa0405440 | Msa0911190 | 0.910058 | 2.861570e-82 | -8.615850e-47 |
| Msa0405440 | Msa0911200 | 0.823861 | 1.102972e-53 | -8.615850e-47 |
| Msa0405440 | Msa0911230 | 0.881578 | 2.136737e-70 | -8.615850e-47 |
| Msa0405440 | Msa0924830 | 0.839245 | 1.777954e-57 | -8.615850e-47 |
| Msa0405440 | Msa0924880 | 0.824880 | 6.349694e-54 | -8.615850e-47 |
| Msa0405440 | Msa0924920 | 0.854724 | 1.016889e-61 | -8.615850e-47 |
| Msa0405440 | Msa0924930 | 0.837184 | 6.036568e-57 | -8.615850e-47 |
| Msa0405440 | Msa0924940 | 0.826741 | 2.297247e-54 | -8.615850e-47 |
| Msa0405440 | Msa0925100 | 0.902904 | 6.012817e-79 | -8.615850e-47 |
| Msa0405440 | Msa0925110 | 0.868933 | 4.517136e-66 | -8.615850e-47 |
| Msa0405440 | Msa0931130 | 0.803847 | 2.866659e-49 | -8.615850e-47 |
| Msa0405440 | Msa0931230 | 0.807869 | 4.094423e-50 | -8.615850e-47 |
| Msa0405440 | Msa0931260 | 0.818887 | 1.550322e-52 | -8.615850e-47 |
| Msa0405440 | Msa0983630 | 0.876045 | 1.907515e-68 | -8.615850e-47 |
| Msa0405440 | Msa0983640 | 0.828486 | 8.755039e-55 | -8.615850e-47 |
| Msa0405440 | Msa1022050 | 0.865506 | 5.620338e-65 | -8.615850e-47 |
| Msa0405440 | Msa1022060 | 0.824732 | 6.881781e-54 | -8.615850e-47 |
| Msa0405440 | Msa1064410 | 0.837878 | 4.008629e-57 | -8.615850e-47 |
| Msa0405440 | Msa1086090 | 0.824183 | 9.263979e-54 | -8.615850e-47 |
| Msa0405440 | Msa1086140 | 0.813313 | 2.727346e-51 | -8.615850e-47 |
| Msa0405440 | Msa1086200 | 0.834030 | 3.793745e-56 | -8.615850e-47 |
| Msa0405440 | Msa1086320 | 0.813465 | 2.524548e-51 | -8.615850e-47 |
| Msa0405440 | Msa1086550 | 0.831398 | 1.707059e-55 | -8.615850e-47 |
| Msa0405440 | Msa1086600 | 0.874756 | 5.265128e-68 | -8.615850e-47 |
| Msa0405440 | Msa1086720 | 0.846250 | 2.444129e-59 | -8.615850e-47 |
| Msa0405440 | Msa1086730 | 0.849973 | 2.292532e-60 | -8.615850e-47 |
| Msa0405440 | Msa1086740 | 0.937211 | 5.002897e-98 | -8.615850e-47 |
| Msa0405440 | Msa1086790 | 0.890058 | 1.388152e-73 | -8.615850e-47 |
| Msa0405440 | Msa1086800 | 0.846063 | 2.747196e-59 | -8.615850e-47 |
| Msa0405440 | Msa1086900 | 0.824528 | 7.689360e-54 | -8.615850e-47 |
| Msa0405440 | Msa1086960 | 0.891932 | 2.527748e-74 | -8.615850e-47 |
| Msa0405440 | Msa1086970 | 0.833933 | 4.012084e-56 | -8.615850e-47 |
| Msa0405440 | Msa1087030 | 0.841772 | 3.879292e-58 | -8.615850e-47 |
| Msa0405440 | Msa1087040 | 0.847460 | 1.140370e-59 | -8.615850e-47 |
| Msa0405440 | Msa1087050 | 0.921720 | 2.491090e-88 | -8.615850e-47 |
| Msa0405440 | Msa1087110 | 0.888367 | 6.285251e-73 | -8.615850e-47 |
| Msa0405440 | Msa1087120 | 0.827119 | 1.865763e-54 | -8.615850e-47 |
| Msa0405440 | Msa1143120 | 0.821371 | 4.185018e-53 | -8.615850e-47 |
| Msa0405440 | Msa1143170 | 0.815980 | 6.999637e-52 | -8.615850e-47 |
| Msa0405440 | Msa1342040 | 0.817238 | 3.656850e-52 | -8.615850e-47 |
| Msa0405440 | Msa1354420 | 0.889421 | 2.459780e-73 | -8.615850e-47 |
| Msa0405440 | Msa1354430 | 0.835105 | 2.036960e-56 | -8.615850e-47 |
| Msa0405440 | Msa1354480 | 0.840191 | 1.008942e-57 | -8.615850e-47 |
| Msa0405440 | Msa1354490 | 0.847312 | 1.252516e-59 | -8.615850e-47 |
| Msa0405440 | Msa1354500 | 0.926066 | 7.808178e-91 | -8.615850e-47 |
| Msa0405440 | Msa1354550 | 0.882652 | 8.708193e-71 | -8.615850e-47 |
| Msa0405440 | Msa1354560 | 0.834574 | 2.770535e-56 | -8.615850e-47 |
| Msa0405440 | Msa1354610 | 0.842990 | 1.845062e-58 | -8.615850e-47 |
| Msa0405440 | Msa1354620 | 0.857272 | 1.827175e-62 | -8.615850e-47 |
| Msa0405440 | Msa1354630 | 0.927105 | 1.867665e-91 | -8.615850e-47 |
| Msa0405440 | Msa1354680 | 0.904801 | 8.396621e-80 | -8.615850e-47 |
| Msa0405440 | Msa1354690 | 0.854955 | 8.718541e-62 | -8.615850e-47 |
| Msa0405440 | Msa1354700 | 0.808668 | 2.766353e-50 | -8.615850e-47 |
| Msa0405440 | Msa1354740 | 0.847726 | 9.637934e-60 | -8.615850e-47 |
| Msa0405440 | Msa1354750 | 0.848090 | 7.647036e-60 | -8.615850e-47 |
| Msa0405440 | Msa1354760 | 0.927971 | 5.576674e-92 | -8.615850e-47 |
| Msa0405440 | Msa1354810 | 0.882637 | 8.816283e-71 | -8.615850e-47 |
| Msa0405440 | Msa1354820 | 0.853294 | 2.628027e-61 | -8.615850e-47 |
| Msa0405440 | Msa1354920 | 0.809521 | 1.816223e-50 | -8.615850e-47 |
| Msa0405440 | Msa1354980 | 0.882858 | 7.322227e-71 | -8.615850e-47 |
| Msa0405440 | Msa1354990 | 0.833923 | 4.033886e-56 | -8.615850e-47 |
| Msa0405440 | Msa1355090 | 0.823717 | 1.192043e-53 | -8.615850e-47 |
| Msa0405440 | Msa1365890 | 0.876060 | 1.884980e-68 | -8.615850e-47 |
| Msa0405440 | Msa1365900 | 0.818257 | 2.154128e-52 | -8.615850e-47 |
| Msa0405440 | Msa1365950 | 0.851873 | 6.681994e-61 | -8.615850e-47 |
| Msa0405440 | Msa1365970 | 0.893906 | 4.059584e-75 | -8.615850e-47 |
| Msa0405440 | Msa1366080 | 0.873388 | 1.528767e-67 | -8.615850e-47 |
| Msa0405440 | Msa1366090 | 0.824134 | 9.512706e-54 | -8.615850e-47 |
| Msa0405440 | Msa1368230 | 0.840165 | 1.024705e-57 | -8.615850e-47 |
| Msa0405440 | Msa1368240 | 0.925241 | 2.394437e-90 | -8.615850e-47 |
| Msa0405440 | Msa1385410 | 0.856948 | 2.278012e-62 | -8.615850e-47 |
| Msa0405440 | Msa1391090 | 0.829131 | 6.111002e-55 | -8.615850e-47 |
| Msa0405440 | Msa1391100 | 0.842283 | 2.843156e-58 | -8.615850e-47 |
| Msa0405440 | Msa1391110 | 0.910684 | 1.421709e-82 | -8.615850e-47 |
| Msa0405440 | Msa1391160 | 0.840889 | 6.625686e-58 | -8.615850e-47 |
| Msa0405440 | Msa1391170 | 0.837903 | 3.949514e-57 | -8.615850e-47 |
| Msa0405440 | Msa1391220 | 0.829653 | 4.562995e-55 | -8.615850e-47 |
| Msa0405440 | Msa1391230 | 0.813846 | 2.081962e-51 | -8.615850e-47 |
| Msa0405440 | Msa1391240 | 0.914231 | 2.443399e-84 | -8.615850e-47 |
| Msa0405440 | Msa1394030 | 0.828835 | 7.208540e-55 | -8.615850e-47 |
| Msa0405440 | Msa1394040 | 0.805674 | 1.191079e-49 | -8.615850e-47 |
| Msa0405440 | Msa1394160 | 0.819053 | 1.421004e-52 | -8.615850e-47 |
| Msa0405440 | Msa1394210 | 0.814460 | 1.523841e-51 | -8.615850e-47 |
| Msa0405440 | Msa1460120 | 0.869673 | 2.595355e-66 | -8.615850e-47 |
| Msa0405440 | Msa1460130 | 0.873770 | 1.136752e-67 | -8.615850e-47 |
| Msa0263770 | Msa0405440 | 0.875059 | 4.151804e-68 | -8.615850e-47 |
| Msa0268210 | Msa0405440 | 0.817107 | 3.914247e-52 | -8.615850e-47 |
| Msa0268250 | Msa0405440 | 0.835748 | 1.400699e-56 | -8.615850e-47 |
| Msa0268260 | Msa0405440 | 0.837500 | 5.009674e-57 | -8.615850e-47 |
| Msa0268270 | Msa0405440 | 0.905930 | 2.548932e-80 | -8.615850e-47 |
| Msa0268300 | Msa0405440 | 0.843385 | 1.447822e-58 | -8.615850e-47 |
| Msa0268310 | Msa0405440 | 0.824526 | 7.695716e-54 | -8.615850e-47 |
| Msa0268450 | Msa0405440 | 0.816341 | 5.814079e-52 | -8.615850e-47 |
| Msa0268570 | Msa0405440 | 0.807162 | 5.782265e-50 | -8.615850e-47 |
| Msa0268630 | Msa0405440 | 0.809202 | 2.126193e-50 | -8.615850e-47 |
| Msa0268670 | Msa0405440 | 0.819496 | 1.126291e-52 | -8.615850e-47 |
| Msa0268750 | Msa0405440 | 0.814888 | 1.224628e-51 | -8.615850e-47 |
| Msa0268830 | Msa0405440 | 0.824676 | 7.093785e-54 | -8.615850e-47 |
| Msa0268880 | Msa0405440 | 0.820325 | 7.279283e-53 | -8.615850e-47 |
| Msa0268950 | Msa0405440 | 0.804586 | 2.012077e-49 | -8.615850e-47 |
| Msa0268960 | Msa0405440 | 0.833752 | 4.453247e-56 | -8.615850e-47 |
| Msa0269040 | Msa0405440 | 0.823857 | 1.105033e-53 | -8.615850e-47 |
| Msa0269130 | Msa0405440 | 0.808047 | 3.752682e-50 | -8.615850e-47 |
| Msa0269140 | Msa0405440 | 0.851371 | 9.267909e-61 | -8.615850e-47 |
| Msa0269150 | Msa0405440 | 0.925796 | 1.127895e-90 | -8.615850e-47 |
| Msa0344310 | Msa0405440 | 0.809796 | 1.584872e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405440 | MtrunA17_Chr7g0234981 | 87.500 | 88 | 11 | 0 | 65 | 152 | 6 | 93 | 3.00e-49 | 153 |
| Msa0405440 | MtrunA17_MTg0491661 | 66.265 | 83 | 28 | 0 | 70 | 152 | 41 | 123 | 4.92e-35 | 118 |
| Msa0405440 | MtrunA17_CPg0492401 | 73.333 | 45 | 12 | 0 | 1 | 45 | 1 | 45 | 3.24e-16 | 68.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0405440 | ATCG00905.1 | 97.647 | 85 | 2 | 0 | 68 | 152 | 1 | 85 | 1.39e-54 | 167 |
| Msa0405440 | ATCG01230.1 | 97.647 | 85 | 2 | 0 | 68 | 152 | 1 | 85 | 1.39e-54 | 167 |
| Msa0405440 | AT2G07675.1 | 51.639 | 122 | 52 | 2 | 31 | 152 | 9 | 123 | 1.42e-34 | 117 |
| Msa0405440 | ATMG00980.1 | 51.639 | 122 | 52 | 2 | 31 | 152 | 9 | 123 | 1.42e-34 | 117 |
Find 40 sgRNAs with CRISPR-Local
Find 176 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAATTCTTTCGAAGTAAT+TGG | 0.147507 | 3_2:+40187265 | None:intergenic |
| GGGGCTAAAATAATTTATTT+TGG | 0.180484 | 3_2:+40186914 | None:intergenic |
| CAACAAGGTCGTTCTAAATA+TGG | 0.216871 | 3_2:-40186947 | Msa0405440:CDS |
| CAGAATGTTCTTGTAAATTA+TGG | 0.231614 | 3_2:+40187065 | None:intergenic |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 3_2:-40187909 | Msa0405440:CDS |
| AACCTATGTTGTATATTAAG+AGG | 0.368497 | 3_2:-40187980 | None:intergenic |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 3_2:+40186975 | None:intergenic |
| ACTTTACGTAAGGCAGAGTT+TGG | 0.377633 | 3_2:+40187145 | None:intergenic |
| AACAAGGTCGTTCTAAATAT+GGG | 0.408379 | 3_2:-40186946 | Msa0405440:CDS |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 3_2:+40186948 | None:intergenic |
| TTGTAAATTATGGCCAATAC+CGG | 0.438557 | 3_2:+40187075 | None:intergenic |
| CATTCTGTAGTCTTAGTAAG+AGG | 0.441296 | 3_2:-40187049 | Msa0405440:CDS |
| GCCAGAGTACGCTTAACCTC+TGG | 0.485872 | 3_2:-40187121 | Msa0405440:CDS |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 3_2:+40187917 | None:intergenic |
| ACTGCTTATATACCCGGTAT+TGG | 0.491318 | 3_2:-40187088 | Msa0405440:CDS |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 3_2:+40186976 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 3_2:-40186975 | Msa0405440:CDS |
| ATTGAACGAGGAGCCGTATG+AGG | 0.537706 | 3_2:-40187248 | Msa0405440:intron |
| TACTCTGGCAACTTTACGTA+AGG | 0.546111 | 3_2:+40187135 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 3_2:-40187048 | Msa0405440:CDS |
| GGTTCTGTAGAGTGGCAGTA+AGG | 0.572203 | 3_2:-40187209 | Msa0405440:intron |
| TCCAGAGGTTAAGCGTACTC+TGG | 0.572579 | 3_2:+40187120 | None:intergenic |
| GAAATCACTGCTTATATACC+CGG | 0.578898 | 3_2:-40187094 | Msa0405440:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 3_2:-40187001 | Msa0405440:CDS |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 3_2:-40187901 | Msa0405440:intron |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 3_2:-40187047 | Msa0405440:CDS |
| AACCTCTTAATATACAACAT+AGG | 0.594876 | 3_2:+40187978 | None:intergenic |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 3_2:-40186962 | Msa0405440:CDS |
| TGTAAATTATGGCCAATACC+GGG | 0.601960 | 3_2:+40187076 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 3_2:-40186983 | Msa0405440:CDS |
| AGCAGTGATTTCAAATCCAG+AGG | 0.620729 | 3_2:+40187105 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 3_2:+40187927 | None:intergenic |
| ACAAGGTCGTTCTAAATATG+GGG | 0.627597 | 3_2:-40186945 | Msa0405440:CDS |
| ATTGTACCATCCTAAAAGCA+AGG | 0.638231 | 3_2:+40187950 | None:intergenic |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 3_2:-40187025 | Msa0405440:CDS |
| GAGTGGAGATTATCGAACGA+AGG | 0.659654 | 3_2:-40187290 | Msa0405440:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 3_2:-40187046 | Msa0405440:CDS |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 3_2:+40187007 | None:intergenic |
| TACTTCGAAAGAATTGAACG+AGG | 0.737159 | 3_2:-40187260 | Msa0405440:CDS |
| GTACCATCCTAAAAGCAAGG+AGG | 0.768564 | 3_2:+40187953 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr3_2:40187180-40187199 | Msa0405440:CDS | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr3_2:40187180-40187199 | Msa0405440:CDS | 15.0% |
| !! | ATCTATCTATAATGATCAAT+TGG | + | chr3_2:40187275-40187294 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr3_2:40187541-40187560 | Msa0405440:intron | 20.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | - | chr3_2:40187586-40187605 | Msa0405440:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | - | chr3_2:40187587-40187606 | Msa0405440:intron | 20.0% |
| !! | ATCTATCTATAATGATCAAT+TGG | + | chr3_2:40187275-40187294 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr3_2:40187541-40187560 | Msa0405440:intron | 20.0% |
| !!! | AATTAGTTCTCGTTATTTTT+AGG | - | chr3_2:40187586-40187605 | Msa0405440:intron | 20.0% |
| !!! | ATTAGTTCTCGTTATTTTTA+GGG | - | chr3_2:40187587-40187606 | Msa0405440:intron | 20.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr3_2:40187065-40187084 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr3_2:40187288-40187307 | Msa0405440:CDS | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr3_2:40187364-40187383 | Msa0405440:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr3_2:40187365-40187384 | Msa0405440:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr3_2:40187432-40187451 | Msa0405440:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr3_2:40187442-40187461 | Msa0405440:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr3_2:40187505-40187524 | None:intergenic | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr3_2:40187641-40187660 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr3_2:40187841-40187860 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr3_2:40187065-40187084 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr3_2:40187288-40187307 | Msa0405440:CDS | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr3_2:40187364-40187383 | Msa0405440:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr3_2:40187365-40187384 | Msa0405440:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr3_2:40187432-40187451 | Msa0405440:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr3_2:40187442-40187461 | Msa0405440:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr3_2:40187505-40187524 | None:intergenic | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr3_2:40187641-40187660 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr3_2:40187841-40187860 | None:intergenic | 25.0% |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr3_2:40187421-40187440 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr3_2:40187422-40187441 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr3_2:40187420-40187439 | Msa0405440:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr3_2:40187437-40187456 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr3_2:40187435-40187454 | Msa0405440:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr3_2:40187441-40187460 | Msa0405440:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr3_2:40187831-40187850 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr3_2:40187855-40187874 | Msa0405440:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr3_2:40187957-40187976 | Msa0405440:CDS | 30.0% |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr3_2:40187421-40187440 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr3_2:40187422-40187441 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr3_2:40187420-40187439 | Msa0405440:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr3_2:40187437-40187456 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr3_2:40187435-40187454 | Msa0405440:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr3_2:40187441-40187460 | Msa0405440:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr3_2:40187831-40187850 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr3_2:40187855-40187874 | Msa0405440:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr3_2:40187957-40187976 | Msa0405440:CDS | 30.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr3_2:40186956-40186975 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr3_2:40187219-40187238 | Msa0405440:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr3_2:40187247-40187266 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr3_2:40187419-40187438 | Msa0405440:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | - | chr3_2:40187591-40187610 | Msa0405440:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr3_2:40187643-40187662 | Msa0405440:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr3_2:40187671-40187690 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr3_2:40187673-40187692 | Msa0405440:intron | 35.0% | |
| !! | TGGTATTTTAGGGGTAATAG+TGG | + | chr3_2:40187741-40187760 | None:intergenic | 35.0% |
| ! | AGGCAGAGTTTGGTATTTTA+GGG | + | chr3_2:40187751-40187770 | None:intergenic | 35.0% |
| ! | AAGGCAGAGTTTGGTATTTT+AGG | + | chr3_2:40187752-40187771 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr3_2:40187809-40187828 | Msa0405440:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr3_2:40187830-40187849 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr3_2:40187854-40187873 | Msa0405440:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr3_2:40187856-40187875 | Msa0405440:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr3_2:40187958-40187977 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr3_2:40187956-40187975 | Msa0405440:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr3_2:40187958-40187977 | Msa0405440:CDS | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr3_2:40186956-40186975 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr3_2:40187219-40187238 | Msa0405440:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr3_2:40187247-40187266 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr3_2:40187419-40187438 | Msa0405440:intron | 35.0% |
| !!! | GTTCTCGTTATTTTTAGGGA+AGG | - | chr3_2:40187591-40187610 | Msa0405440:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr3_2:40187643-40187662 | Msa0405440:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr3_2:40187671-40187690 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr3_2:40187673-40187692 | Msa0405440:intron | 35.0% | |
| !! | TGGTATTTTAGGGGTAATAG+TGG | + | chr3_2:40187741-40187760 | None:intergenic | 35.0% |
| ! | AGGCAGAGTTTGGTATTTTA+GGG | + | chr3_2:40187751-40187770 | None:intergenic | 35.0% |
| ! | AAGGCAGAGTTTGGTATTTT+AGG | + | chr3_2:40187752-40187771 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr3_2:40187809-40187828 | Msa0405440:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr3_2:40187830-40187849 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr3_2:40187854-40187873 | Msa0405440:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr3_2:40187856-40187875 | Msa0405440:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr3_2:40187958-40187977 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr3_2:40187956-40187975 | Msa0405440:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr3_2:40187958-40187977 | Msa0405440:CDS | 35.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr3_2:40187030-40187049 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr3_2:40187029-40187048 | Msa0405440:CDS | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | - | chr3_2:40187348-40187367 | Msa0405440:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr3_2:40187377-40187396 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr3_2:40187398-40187417 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | - | chr3_2:40187596-40187615 | Msa0405440:intron | 40.0% |
| !! | GGCAGAGTTTGGTATTTTAG+GGG | + | chr3_2:40187750-40187769 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr3_2:40187761-40187780 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr3_2:40187771-40187790 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr3_2:40187801-40187820 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr3_2:40187815-40187834 | Msa0405440:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr3_2:40187857-40187876 | Msa0405440:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr3_2:40187899-40187918 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr3_2:40187902-40187921 | Msa0405440:CDS | 40.0% | |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr3_2:40187030-40187049 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr3_2:40187029-40187048 | Msa0405440:CDS | 40.0% | |
| AGCGGGTATCTTTCACAAAA+AGG | - | chr3_2:40187348-40187367 | Msa0405440:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr3_2:40187377-40187396 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr3_2:40187398-40187417 | None:intergenic | 40.0% | |
| !!! | CGTTATTTTTAGGGAAGGAG+TGG | - | chr3_2:40187596-40187615 | Msa0405440:intron | 40.0% |
| !! | GGCAGAGTTTGGTATTTTAG+GGG | + | chr3_2:40187750-40187769 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr3_2:40187761-40187780 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr3_2:40187771-40187790 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr3_2:40187801-40187820 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr3_2:40187815-40187834 | Msa0405440:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr3_2:40187857-40187876 | Msa0405440:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr3_2:40187899-40187918 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr3_2:40187902-40187921 | Msa0405440:CDS | 40.0% | |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr3_2:40186943-40186962 | Msa0405440:CDS | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr3_2:40186947-40186966 | Msa0405440:CDS | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr3_2:40186953-40186972 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr3_2:40187001-40187020 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr3_2:40187002-40187021 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr3_2:40187003-40187022 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr3_2:40187002-40187021 | Msa0405440:CDS | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr3_2:40187452-40187471 | Msa0405440:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr3_2:40187613-40187632 | Msa0405440:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr3_2:40187686-40187705 | Msa0405440:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr3_2:40187861-40187880 | Msa0405440:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr3_2:40187862-40187881 | Msa0405440:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr3_2:40187878-40187897 | Msa0405440:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr3_2:40187930-40187949 | None:intergenic | 45.0% | |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr3_2:40186943-40186962 | Msa0405440:CDS | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr3_2:40186947-40186966 | Msa0405440:CDS | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr3_2:40186953-40186972 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr3_2:40187001-40187020 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr3_2:40187002-40187021 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr3_2:40187003-40187022 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr3_2:40187002-40187021 | Msa0405440:CDS | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr3_2:40187452-40187471 | Msa0405440:intron | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr3_2:40187613-40187632 | Msa0405440:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr3_2:40187686-40187705 | Msa0405440:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr3_2:40187861-40187880 | Msa0405440:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr3_2:40187862-40187881 | Msa0405440:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr3_2:40187878-40187897 | Msa0405440:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr3_2:40187930-40187949 | None:intergenic | 45.0% | |
| AGATACCCGCTTTCGTGCTT+TGG | + | chr3_2:40187339-40187358 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr3_2:40187380-40187399 | Msa0405440:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr3_2:40187655-40187674 | Msa0405440:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr3_2:40187694-40187713 | Msa0405440:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr3_2:40187786-40187805 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr3_2:40187868-40187887 | Msa0405440:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr3_2:40187931-40187950 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr3_2:40187928-40187947 | Msa0405440:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr3_2:40187941-40187960 | Msa0405440:CDS | 50.0% | |
| AGATACCCGCTTTCGTGCTT+TGG | + | chr3_2:40187339-40187358 | None:intergenic | 50.0% | |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr3_2:40187380-40187399 | Msa0405440:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr3_2:40187655-40187674 | Msa0405440:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr3_2:40187694-40187713 | Msa0405440:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr3_2:40187786-40187805 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr3_2:40187868-40187887 | Msa0405440:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr3_2:40187931-40187950 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr3_2:40187928-40187947 | Msa0405440:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr3_2:40187941-40187960 | Msa0405440:CDS | 50.0% | |
| GACCCACCAAAGCACGAAAG+CGG | - | chr3_2:40187330-40187349 | Msa0405440:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr3_2:40187331-40187350 | Msa0405440:intron | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | + | chr3_2:40187335-40187354 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | + | chr3_2:40187336-40187355 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr3_2:40187782-40187801 | Msa0405440:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr3_2:40187920-40187939 | Msa0405440:CDS | 55.0% | |
| GACCCACCAAAGCACGAAAG+CGG | - | chr3_2:40187330-40187349 | Msa0405440:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr3_2:40187331-40187350 | Msa0405440:intron | 55.0% | |
| ACCCGCTTTCGTGCTTTGGT+GGG | + | chr3_2:40187335-40187354 | None:intergenic | 55.0% | |
| TACCCGCTTTCGTGCTTTGG+TGG | + | chr3_2:40187336-40187355 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr3_2:40187782-40187801 | Msa0405440:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr3_2:40187920-40187939 | Msa0405440:CDS | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr3_2:40186979-40186998 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr3_2:40186996-40187015 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr3_2:40186994-40187013 | Msa0405440:CDS | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr3_2:40186979-40186998 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr3_2:40186996-40187015 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr3_2:40186994-40187013 | Msa0405440:CDS | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr3_2:40186989-40187008 | None:intergenic | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr3_2:40186989-40187008 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 40186928 | 40187997 | 40186928 | ID=Msa0405440;Name=Msa0405440 |
| chr3_2 | mRNA | 40186928 | 40187997 | 40186928 | ID=Msa0405440-mRNA-1;Parent=Msa0405440;Name=Msa0405440-mRNA-1;_AED=0.39;_eAED=0.40;_QI=0|0|0|1|1|1|3|0|152 |
| chr3_2 | exon | 40187902 | 40187997 | 40187902 | ID=Msa0405440-mRNA-1:exon:7786;Parent=Msa0405440-mRNA-1 |
| chr3_2 | exon | 40187249 | 40187317 | 40187249 | ID=Msa0405440-mRNA-1:exon:7785;Parent=Msa0405440-mRNA-1 |
| chr3_2 | exon | 40186928 | 40187221 | 40186928 | ID=Msa0405440-mRNA-1:exon:7784;Parent=Msa0405440-mRNA-1 |
| chr3_2 | CDS | 40187902 | 40187997 | 40187902 | ID=Msa0405440-mRNA-1:cds;Parent=Msa0405440-mRNA-1 |
| chr3_2 | CDS | 40187249 | 40187317 | 40187249 | ID=Msa0405440-mRNA-1:cds;Parent=Msa0405440-mRNA-1 |
| chr3_2 | CDS | 40186928 | 40187221 | 40186928 | ID=Msa0405440-mRNA-1:cds;Parent=Msa0405440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
