Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493180 | AES88212.1 | 75.735 | 136 | 1 | 1 | 1 | 104 | 1 | 136 | 2.57e-61 | 193 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493180 | sp|Q2PMR7|PSBE_SOYBN | 71.951 | 82 | 23 | 0 | 1 | 82 | 1 | 82 | 7.78e-34 | 115 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493180 | A0A6A5LQW0 | 72.527 | 91 | 18 | 1 | 1 | 84 | 1 | 91 | 7.76e-36 | 126 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002110 | Msa0493180 | 0.840474 | 8.509207e-58 | -8.615850e-47 |
| Msa0011440 | Msa0493180 | 0.810804 | 9.609216e-51 | -8.615850e-47 |
| Msa0017300 | Msa0493180 | 0.834199 | 3.441814e-56 | -8.615850e-47 |
| Msa0029520 | Msa0493180 | 0.875925 | 2.098324e-68 | -8.615850e-47 |
| Msa0032930 | Msa0493180 | 0.806003 | 1.015952e-49 | -8.615850e-47 |
| Msa0033840 | Msa0493180 | 0.885782 | 6.042424e-72 | -8.615850e-47 |
| Msa0065670 | Msa0493180 | 0.839993 | 1.136045e-57 | -8.615850e-47 |
| Msa0067590 | Msa0493180 | 0.835793 | 1.364115e-56 | -8.615850e-47 |
| Msa0074860 | Msa0493180 | 0.800166 | 1.636839e-48 | -8.615850e-47 |
| Msa0075990 | Msa0493180 | 0.820582 | 6.355748e-53 | -8.615850e-47 |
| Msa0079840 | Msa0493180 | 0.800890 | 1.165470e-48 | -8.615850e-47 |
| Msa0080060 | Msa0493180 | 0.803173 | 3.955172e-49 | -8.615850e-47 |
| Msa0081610 | Msa0493180 | 0.876158 | 1.744581e-68 | -8.615850e-47 |
| Msa0094170 | Msa0493180 | 0.800508 | 1.394766e-48 | -8.615850e-47 |
| Msa0095810 | Msa0493180 | 0.828985 | 6.631335e-55 | -8.615850e-47 |
| Msa0098500 | Msa0493180 | 0.818733 | 1.680342e-52 | -8.615850e-47 |
| Msa0111110 | Msa0493180 | 0.849161 | 3.862062e-60 | -8.615850e-47 |
| Msa0126750 | Msa0493180 | 0.827973 | 1.163509e-54 | -8.615850e-47 |
| Msa0127220 | Msa0493180 | 0.803114 | 4.068520e-49 | -8.615850e-47 |
| Msa0138990 | Msa0493180 | 0.818293 | 2.114522e-52 | -8.615850e-47 |
| Msa0151510 | Msa0493180 | 0.804376 | 2.225604e-49 | -8.615850e-47 |
| Msa0154890 | Msa0493180 | 0.823488 | 1.348491e-53 | -8.615850e-47 |
| Msa0158890 | Msa0493180 | 0.818664 | 1.741728e-52 | -8.615850e-47 |
| Msa0163540 | Msa0493180 | 0.804621 | 1.978578e-49 | -8.615850e-47 |
| Msa0168770 | Msa0493180 | 0.838561 | 2.672999e-57 | -8.615850e-47 |
| Msa0173580 | Msa0493180 | 0.801049 | 1.081442e-48 | -8.615850e-47 |
| Msa0173950 | Msa0493180 | 0.883621 | 3.841229e-71 | -8.615850e-47 |
| Msa0211590 | Msa0493180 | 0.810129 | 1.343863e-50 | -8.615850e-47 |
| Msa0221850 | Msa0493180 | 0.982793 | 5.135582e-156 | -8.615850e-47 |
| Msa0225790 | Msa0493180 | 0.821447 | 4.018292e-53 | -8.615850e-47 |
| Msa0368450 | Msa0493180 | 0.839988 | 1.139917e-57 | -8.615850e-47 |
| Msa0380400 | Msa0493180 | 0.815311 | 9.863264e-52 | -8.615850e-47 |
| Msa0387630 | Msa0493180 | 0.804257 | 2.356373e-49 | -8.615850e-47 |
| Msa0389080 | Msa0493180 | 0.874404 | 6.935733e-68 | -8.615850e-47 |
| Msa0398600 | Msa0493180 | 0.893009 | 9.360660e-75 | -8.615850e-47 |
| Msa0401860 | Msa0493180 | 0.857035 | 2.147028e-62 | -8.615850e-47 |
| Msa0405460 | Msa0493180 | 0.884453 | 1.892387e-71 | -8.615850e-47 |
| Msa0405470 | Msa0493180 | 0.892547 | 1.436054e-74 | -8.615850e-47 |
| Msa0405550 | Msa0493180 | 0.888556 | 5.318107e-73 | -8.615850e-47 |
| Msa0432490 | Msa0493180 | 0.809547 | 1.792576e-50 | -8.615850e-47 |
| Msa0436270 | Msa0493180 | 0.801013 | 1.099829e-48 | -8.615850e-47 |
| Msa0449910 | Msa0493180 | 0.975958 | 6.443162e-141 | -8.615850e-47 |
| Msa0461150 | Msa0493180 | 0.806364 | 8.528137e-50 | -8.615850e-47 |
| Msa0461620 | Msa0493180 | 0.836768 | 7.708817e-57 | -8.615850e-47 |
| Msa0463030 | Msa0493180 | 0.800509 | 1.393942e-48 | -8.615850e-47 |
| Msa0476890 | Msa0493180 | 0.845481 | 3.953208e-59 | -8.615850e-47 |
| Msa0252150 | Msa0493180 | 0.807330 | 5.328644e-50 | -8.615850e-47 |
| Msa0260580 | Msa0493180 | 0.810310 | 1.228122e-50 | -8.615850e-47 |
| Msa0260640 | Msa0493180 | 0.809687 | 1.673087e-50 | -8.615850e-47 |
| Msa0261350 | Msa0493180 | 0.815832 | 7.551538e-52 | -8.615850e-47 |
| Msa0261660 | Msa0493180 | 0.805114 | 1.560645e-49 | -8.615850e-47 |
| Msa0268190 | Msa0493180 | 0.802096 | 6.596319e-49 | -8.615850e-47 |
| Msa0268210 | Msa0493180 | 0.830222 | 3.316582e-55 | -8.615850e-47 |
| Msa0268430 | Msa0493180 | 0.806799 | 6.901220e-50 | -8.615850e-47 |
| Msa0268450 | Msa0493180 | 0.836368 | 9.747682e-57 | -8.615850e-47 |
| Msa0268570 | Msa0493180 | 0.810886 | 9.223019e-51 | -8.615850e-47 |
| Msa0268660 | Msa0493180 | 0.825312 | 5.020403e-54 | -8.615850e-47 |
| Msa0268670 | Msa0493180 | 0.854981 | 8.569939e-62 | -8.615850e-47 |
| Msa0268700 | Msa0493180 | 0.800324 | 1.520039e-48 | -8.615850e-47 |
| Msa0268750 | Msa0493180 | 0.809001 | 2.347408e-50 | -8.615850e-47 |
| Msa0268860 | Msa0493180 | 0.806168 | 9.376470e-50 | -8.615850e-47 |
| Msa0268880 | Msa0493180 | 0.828400 | 9.182288e-55 | -8.615850e-47 |
| Msa0269070 | Msa0493180 | 0.806029 | 1.003266e-49 | -8.615850e-47 |
| Msa0269090 | Msa0493180 | 0.825047 | 5.800611e-54 | -8.615850e-47 |
| Msa0269170 | Msa0493180 | 0.873878 | 1.044918e-67 | -8.615850e-47 |
| Msa0332190 | Msa0493180 | -0.807938 | 3.958585e-50 | -8.615850e-47 |
| Msa0332200 | Msa0493180 | -0.808886 | 2.485048e-50 | -8.615850e-47 |
| Msa0334450 | Msa0493180 | 0.807341 | 5.300866e-50 | -8.615850e-47 |
| Msa0340700 | Msa0493180 | 0.822819 | 1.931741e-53 | -8.615850e-47 |
| Msa0360790 | Msa0493180 | 0.811289 | 7.543322e-51 | -8.615850e-47 |
| Msa0483970 | Msa0493180 | 0.887445 | 1.417749e-72 | -8.615850e-47 |
| Msa0483980 | Msa0493180 | 0.835208 | 1.918585e-56 | -8.615850e-47 |
| Msa0484040 | Msa0493180 | 0.804289 | 2.320638e-49 | -8.615850e-47 |
| Msa0493180 | Msa0507960 | 0.828357 | 9.402760e-55 | -8.615850e-47 |
| Msa0493180 | Msa0521260 | 0.823856 | 1.105581e-53 | -8.615850e-47 |
| Msa0493180 | Msa0550980 | 0.807228 | 5.598949e-50 | -8.615850e-47 |
| Msa0493180 | Msa0550990 | 0.823962 | 1.044159e-53 | -8.615850e-47 |
| Msa0493180 | Msa0558780 | 0.802399 | 5.714890e-49 | -8.615850e-47 |
| Msa0493180 | Msa0576020 | 0.814797 | 1.283050e-51 | -8.615850e-47 |
| Msa0493180 | Msa0581090 | 0.804398 | 2.201522e-49 | -8.615850e-47 |
| Msa0493180 | Msa0582560 | 0.801467 | 8.879841e-49 | -8.615850e-47 |
| Msa0493180 | Msa0582650 | 0.810252 | 1.263942e-50 | -8.615850e-47 |
| Msa0493180 | Msa0582770 | 0.818009 | 2.450767e-52 | -8.615850e-47 |
| Msa0493180 | Msa0582860 | 0.806542 | 7.822250e-50 | -8.615850e-47 |
| Msa0493180 | Msa0582920 | 0.809939 | 1.476502e-50 | -8.615850e-47 |
| Msa0493180 | Msa0590620 | 0.813752 | 2.183198e-51 | -8.615850e-47 |
| Msa0493180 | Msa0591250 | 0.851889 | 6.613344e-61 | -8.615850e-47 |
| Msa0493180 | Msa0591340 | 0.867825 | 1.028398e-65 | -8.615850e-47 |
| Msa0493180 | Msa0592330 | -0.807749 | 4.342433e-50 | -8.615850e-47 |
| Msa0493180 | Msa0606340 | 0.813484 | 2.501130e-51 | -8.615850e-47 |
| Msa0493180 | Msa0606350 | 0.837580 | 4.779088e-57 | -8.615850e-47 |
| Msa0493180 | Msa0649160 | 0.803302 | 3.719607e-49 | -8.615850e-47 |
| Msa0493180 | Msa0690100 | 0.806242 | 9.046254e-50 | -8.615850e-47 |
| Msa0493180 | Msa0711110 | 0.818101 | 2.336279e-52 | -8.615850e-47 |
| Msa0493180 | Msa0742370 | 0.803835 | 2.883216e-49 | -8.615850e-47 |
| Msa0493180 | Msa0779450 | 0.822036 | 2.936445e-53 | -8.615850e-47 |
| Msa0493180 | Msa0788450 | 0.816075 | 6.666752e-52 | -8.615850e-47 |
| Msa0493180 | Msa0796580 | 0.803659 | 3.136834e-49 | -8.615850e-47 |
| Msa0493180 | Msa0825570 | 0.816508 | 5.333345e-52 | -8.615850e-47 |
| Msa0493180 | Msa0826540 | 0.813255 | 2.807841e-51 | -8.615850e-47 |
| Msa0493180 | Msa0829210 | 0.837828 | 4.127965e-57 | -8.615850e-47 |
| Msa0493180 | Msa0829250 | 0.829209 | 5.849147e-55 | -8.615850e-47 |
| Msa0493180 | Msa0832160 | 0.820390 | 7.035579e-53 | -8.615850e-47 |
| Msa0493180 | Msa0833950 | 0.817735 | 2.826176e-52 | -8.615850e-47 |
| Msa0493180 | Msa0862480 | 0.805799 | 1.121369e-49 | -8.615850e-47 |
| Msa0493180 | Msa0864820 | 0.818616 | 1.786422e-52 | -8.615850e-47 |
| Msa0493180 | Msa0867660 | 0.873461 | 1.444277e-67 | -8.615850e-47 |
| Msa0493180 | Msa0869420 | 0.842923 | 1.921777e-58 | -8.615850e-47 |
| Msa0493180 | Msa0881530 | 0.835164 | 1.968371e-56 | -8.615850e-47 |
| Msa0493180 | Msa0908260 | 0.880829 | 3.974954e-70 | -8.615850e-47 |
| Msa0493180 | Msa0908270 | 0.853459 | 2.357368e-61 | -8.615850e-47 |
| Msa0493180 | Msa0908280 | 0.853885 | 1.777530e-61 | -8.615850e-47 |
| Msa0493180 | Msa0908350 | 0.842510 | 2.475159e-58 | -8.615850e-47 |
| Msa0493180 | Msa0908360 | 0.818483 | 1.914789e-52 | -8.615850e-47 |
| Msa0493180 | Msa0908460 | 0.803221 | 3.865565e-49 | -8.615850e-47 |
| Msa0493180 | Msa0908470 | 0.877014 | 8.826531e-69 | -8.615850e-47 |
| Msa0493180 | Msa0908480 | 0.805541 | 1.270127e-49 | -8.615850e-47 |
| Msa0493180 | Msa0908490 | 0.817025 | 4.084656e-52 | -8.615850e-47 |
| Msa0493180 | Msa0908500 | 0.848082 | 7.687281e-60 | -8.615850e-47 |
| Msa0493180 | Msa0908510 | 0.872518 | 2.990151e-67 | -8.615850e-47 |
| Msa0493180 | Msa0908520 | 0.819337 | 1.224655e-52 | -8.615850e-47 |
| Msa0493180 | Msa0908630 | 0.888146 | 7.643367e-73 | -8.615850e-47 |
| Msa0493180 | Msa0908690 | 0.877660 | 5.259287e-69 | -8.615850e-47 |
| Msa0493180 | Msa0908700 | 0.872476 | 3.088724e-67 | -8.615850e-47 |
| Msa0493180 | Msa0908710 | 0.802872 | 4.564208e-49 | -8.615850e-47 |
| Msa0493180 | Msa0911180 | 0.831177 | 1.935004e-55 | -8.615850e-47 |
| Msa0493180 | Msa0911220 | 0.839950 | 1.165630e-57 | -8.615850e-47 |
| Msa0493180 | Msa0919120 | 0.807222 | 5.617904e-50 | -8.615850e-47 |
| Msa0493180 | Msa0924830 | 0.812086 | 5.060680e-51 | -8.615850e-47 |
| Msa0493180 | Msa0924840 | 0.909547 | 5.047312e-82 | -8.615850e-47 |
| Msa0493180 | Msa0924900 | 0.872439 | 3.178184e-67 | -8.615850e-47 |
| Msa0493180 | Msa0924980 | 0.969470 | 3.604159e-130 | -8.615850e-47 |
| Msa0493180 | Msa0925030 | 0.984461 | 1.252624e-160 | -8.615850e-47 |
| Msa0493180 | Msa0931000 | 0.978485 | 6.358876e-146 | -8.615850e-47 |
| Msa0493180 | Msa0931180 | 0.802347 | 5.856928e-49 | -8.615850e-47 |
| Msa0493180 | Msa0931230 | 0.802718 | 4.912002e-49 | -8.615850e-47 |
| Msa0493180 | Msa0945520 | 0.812455 | 4.203241e-51 | -8.615850e-47 |
| Msa0493180 | Msa0963720 | 0.804298 | 2.310262e-49 | -8.615850e-47 |
| Msa0493180 | Msa0971690 | 0.836978 | 6.815623e-57 | -8.615850e-47 |
| Msa0493180 | Msa0982090 | 0.862594 | 4.537237e-64 | -8.615850e-47 |
| Msa0493180 | Msa0983600 | 0.874635 | 5.788537e-68 | -8.615850e-47 |
| Msa0493180 | Msa0983610 | 0.871095 | 8.869011e-67 | -8.615850e-47 |
| Msa0493180 | Msa0983620 | 0.807891 | 4.050019e-50 | -8.615850e-47 |
| Msa0493180 | Msa1031190 | 0.800882 | 1.169966e-48 | -8.615850e-47 |
| Msa0493180 | Msa1086090 | 0.809718 | 1.647380e-50 | -8.615850e-47 |
| Msa0493180 | Msa1086200 | 0.817057 | 4.016509e-52 | -8.615850e-47 |
| Msa0493180 | Msa1086320 | 0.821024 | 5.030529e-53 | -8.615850e-47 |
| Msa0493180 | Msa1086490 | 0.845465 | 3.993472e-59 | -8.615850e-47 |
| Msa0493180 | Msa1086510 | 0.812022 | 5.224654e-51 | -8.615850e-47 |
| Msa0493180 | Msa1086670 | 0.851495 | 8.551052e-61 | -8.615850e-47 |
| Msa0493180 | Msa1086680 | 0.816305 | 5.923374e-52 | -8.615850e-47 |
| Msa0493180 | Msa1086760 | 0.873250 | 1.700570e-67 | -8.615850e-47 |
| Msa0493180 | Msa1086770 | 0.868907 | 4.604369e-66 | -8.615850e-47 |
| Msa0493180 | Msa1086900 | 0.815799 | 7.683855e-52 | -8.615850e-47 |
| Msa0493180 | Msa1086940 | 0.870767 | 1.138116e-66 | -8.615850e-47 |
| Msa0493180 | Msa1087070 | 0.880648 | 4.617243e-70 | -8.615850e-47 |
| Msa0493180 | Msa1087080 | 0.859258 | 4.683020e-63 | -8.615850e-47 |
| Msa0493180 | Msa1087090 | 0.872642 | 2.719303e-67 | -8.615850e-47 |
| Msa0493180 | Msa1091710 | 0.965951 | 2.825213e-125 | -8.615850e-47 |
| Msa0493180 | Msa1119420 | 0.803513 | 3.363574e-49 | -8.615850e-47 |
| Msa0493180 | Msa1121720 | 0.809874 | 1.525062e-50 | -8.615850e-47 |
| Msa0493180 | Msa1143170 | 0.813692 | 2.250730e-51 | -8.615850e-47 |
| Msa0493180 | Msa1158180 | 0.800850 | 1.187420e-48 | -8.615850e-47 |
| Msa0493180 | Msa1181370 | 0.836187 | 1.083860e-56 | -8.615850e-47 |
| Msa0493180 | Msa1197740 | 0.804578 | 2.019737e-49 | -8.615850e-47 |
| Msa0493180 | Msa1199540 | 0.806260 | 8.966462e-50 | -8.615850e-47 |
| Msa0493180 | Msa1236120 | 0.800304 | 1.534624e-48 | -8.615850e-47 |
| Msa0493180 | Msa1236190 | 0.800585 | 1.345194e-48 | -8.615850e-47 |
| Msa0493180 | Msa1251440 | 0.807184 | 5.720658e-50 | -8.615850e-47 |
| Msa0493180 | Msa1260640 | 0.816529 | 5.276485e-52 | -8.615850e-47 |
| Msa0493180 | Msa1273620 | 0.874070 | 8.998671e-68 | -8.615850e-47 |
| Msa0493180 | Msa1305970 | 0.840696 | 7.441930e-58 | -8.615850e-47 |
| Msa0493180 | Msa1311600 | 0.854868 | 9.239821e-62 | -8.615850e-47 |
| Msa0493180 | Msa1328680 | 0.803561 | 3.287666e-49 | -8.615850e-47 |
| Msa0493180 | Msa1331720 | 0.804351 | 2.251987e-49 | -8.615850e-47 |
| Msa0493180 | Msa1342960 | 0.812991 | 3.208284e-51 | -8.615850e-47 |
| Msa0493180 | Msa1354360 | 0.867453 | 1.353013e-65 | -8.615850e-47 |
| Msa0493180 | Msa1354370 | 0.853283 | 2.646446e-61 | -8.615850e-47 |
| Msa0493180 | Msa1354400 | 0.873873 | 1.049020e-67 | -8.615850e-47 |
| Msa0493180 | Msa1354510 | 0.806508 | 7.951300e-50 | -8.615850e-47 |
| Msa0493180 | Msa1354520 | 0.866941 | 1.971895e-65 | -8.615850e-47 |
| Msa0493180 | Msa1354530 | 0.871851 | 4.985984e-67 | -8.615850e-47 |
| Msa0493180 | Msa1354650 | 0.871069 | 9.049007e-67 | -8.615850e-47 |
| Msa0493180 | Msa1354660 | 0.873060 | 1.969885e-67 | -8.615850e-47 |
| Msa0493180 | Msa1354780 | 0.871387 | 7.104876e-67 | -8.615850e-47 |
| Msa0493180 | Msa1354790 | 0.873638 | 1.259054e-67 | -8.615850e-47 |
| Msa0493180 | Msa1354920 | 0.814508 | 1.486547e-51 | -8.615850e-47 |
| Msa0493180 | Msa1354960 | 0.872660 | 2.681345e-67 | -8.615850e-47 |
| Msa0493180 | Msa1354970 | 0.808524 | 2.968788e-50 | -8.615850e-47 |
| Msa0493180 | Msa1355090 | 0.807300 | 5.407704e-50 | -8.615850e-47 |
| Msa0493180 | Msa1356100 | 0.807068 | 6.053184e-50 | -8.615850e-47 |
| Msa0493180 | Msa1365980 | 0.803711 | 3.059440e-49 | -8.615850e-47 |
| Msa0493180 | Msa1365990 | 0.876558 | 1.269072e-68 | -8.615850e-47 |
| Msa0493180 | Msa1366020 | 0.871667 | 5.740758e-67 | -8.615850e-47 |
| Msa0493180 | Msa1366030 | 0.872334 | 3.443866e-67 | -8.615850e-47 |
| Msa0493180 | Msa1366060 | 0.871356 | 7.273797e-67 | -8.615850e-47 |
| Msa0493180 | Msa1366070 | 0.803301 | 3.722053e-49 | -8.615850e-47 |
| Msa0493180 | Msa1368250 | 0.806805 | 6.881226e-50 | -8.615850e-47 |
| Msa0493180 | Msa1368260 | 0.876513 | 1.315698e-68 | -8.615850e-47 |
| Msa0493180 | Msa1375610 | 0.803297 | 3.727646e-49 | -8.615850e-47 |
| Msa0493180 | Msa1382380 | 0.862566 | 4.629319e-64 | -8.615850e-47 |
| Msa0493180 | Msa1385360 | 0.877400 | 6.477025e-69 | -8.615850e-47 |
| Msa0493180 | Msa1385390 | 0.875065 | 4.133185e-68 | -8.615850e-47 |
| Msa0493180 | Msa1388030 | 0.805316 | 1.416128e-49 | -8.615850e-47 |
| Msa0493180 | Msa1389670 | 0.813889 | 2.036299e-51 | -8.615850e-47 |
| Msa0493180 | Msa1391120 | 0.807423 | 5.091559e-50 | -8.615850e-47 |
| Msa0493180 | Msa1391130 | 0.875171 | 3.801475e-68 | -8.615850e-47 |
| Msa0493180 | Msa1391140 | 0.873205 | 1.761268e-67 | -8.615850e-47 |
| Msa0493180 | Msa1391250 | 0.800659 | 1.299216e-48 | -8.615850e-47 |
| Msa0493180 | Msa1391260 | 0.869298 | 3.439225e-66 | -8.615850e-47 |
| Msa0493180 | Msa1394080 | 0.811818 | 5.789224e-51 | -8.615850e-47 |
| Msa0493180 | Msa1394270 | 0.816453 | 5.488019e-52 | -8.615850e-47 |
| Msa0493180 | Msa1410480 | 0.818440 | 1.958069e-52 | -8.615850e-47 |
| Msa0493180 | Msa1410500 | 0.802632 | 5.115672e-49 | -8.615850e-47 |
| Msa0493180 | Msa1440140 | 0.831931 | 1.261410e-55 | -8.615850e-47 |
| Msa0493180 | Msa1444130 | 0.803217 | 3.872533e-49 | -8.615850e-47 |
| Msa0493180 | Msa1459680 | 0.801895 | 7.254366e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493180 | MtrunA17_CPg0492821 | 70.732 | 82 | 24 | 0 | 1 | 82 | 1 | 82 | 6.38e-34 | 112 |
| Msa0493180 | MtrunA17_Chr4g0016851 | 70.732 | 82 | 24 | 0 | 1 | 82 | 1 | 82 | 6.38e-34 | 112 |
| Msa0493180 | MtrunA17_Chr4g0015751 | 70.732 | 82 | 24 | 0 | 1 | 82 | 1 | 82 | 6.38e-34 | 112 |
| Msa0493180 | MtrunA17_Chr4g0017011 | 98.148 | 54 | 1 | 0 | 1 | 54 | 1 | 54 | 2.07e-33 | 111 |
| Msa0493180 | MtrunA17_Chr5g0423051 | 96.296 | 54 | 2 | 0 | 1 | 54 | 1 | 54 | 3.52e-32 | 107 |
| Msa0493180 | MtrunA17_Chr4g0016841 | 61.538 | 91 | 21 | 2 | 14 | 104 | 9 | 85 | 4.52e-31 | 105 |
| Msa0493180 | MtrunA17_Chr6g0451331 | 90.323 | 31 | 3 | 0 | 24 | 54 | 41 | 71 | 5.28e-14 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0493180 | ATCG00580.1 | 70.732 | 82 | 24 | 0 | 1 | 82 | 1 | 82 | 1.19e-34 | 114 |
| Msa0493180 | ATCG00560.1 | 97.297 | 37 | 1 | 0 | 68 | 104 | 2 | 38 | 3.75e-19 | 73.9 |
Find 25 sgRNAs with CRISPR-Local
Find 48 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTTTAGCTTACGATGTATT+TGG | 0.244623 | 3_4:-17657432 | Msa0493180:CDS |
| GTAGCTCTATAATTCGGATT+AGG | 0.338134 | 3_4:+17657170 | None:intergenic |
| ATAACCAACCCGCAATGAAT+AGG | 0.348030 | 3_4:+17657466 | None:intergenic |
| TTATTACCAGTATTCGATAC+TGG | 0.348418 | 3_4:-17657515 | Msa0493180:CDS |
| TATGTGGAGCTCGGCATGTC+TGG | 0.349487 | 3_4:-17657567 | Msa0493180:exon |
| ATACCCTCCCTATTCATTGC+GGG | 0.391873 | 3_4:-17657474 | Msa0493180:CDS |
| TAACCAACCCGCAATGAATA+GGG | 0.406851 | 3_4:+17657467 | None:intergenic |
| TGAATCGTACCAGTCTCTAC+TGG | 0.410190 | 3_4:-17657112 | Msa0493180:CDS |
| CTTTCTGTAAAATACTCGTT+TGG | 0.412027 | 3_4:+17657399 | None:intergenic |
| TGTGTCGTAGCTCTATAATT+CGG | 0.415726 | 3_4:+17657164 | None:intergenic |
| AATAATCCAGTATCGAATAC+TGG | 0.423687 | 3_4:+17657509 | None:intergenic |
| CTCGGCATGTCTGGAAGCAC+AGG | 0.508926 | 3_4:-17657558 | Msa0493180:exon |
| ATTCGGATTAGGTTTATCGT+TGG | 0.512045 | 3_4:+17657181 | None:intergenic |
| GAATCGTACCAGTCTCTACT+GGG | 0.515213 | 3_4:-17657111 | Msa0493180:CDS |
| TTTGACTGTATAAGAATATG+TGG | 0.517465 | 3_4:-17657583 | None:intergenic |
| GGTTGGTTATTTGTCAGCAC+GGG | 0.523918 | 3_4:-17657453 | Msa0493180:CDS |
| GGGTTGGTTATTTGTCAGCA+CGG | 0.532372 | 3_4:-17657454 | Msa0493180:CDS |
| CCTCCCTATTCATTGCGGGT+TGG | 0.536548 | 3_4:-17657470 | Msa0493180:CDS |
| GTAAAATACTCGTTTGGACG+AGG | 0.550593 | 3_4:+17657405 | None:intergenic |
| TAATAAACCCCAGTAGAGAC+TGG | 0.572062 | 3_4:+17657103 | None:intergenic |
| GTATAAGAATATGTGGAGCT+CGG | 0.584815 | 3_4:-17657576 | None:intergenic |
| TATACCCTCCCTATTCATTG+CGG | 0.586067 | 3_4:-17657475 | Msa0493180:CDS |
| CAACCCGCAATGAATAGGGA+GGG | 0.665638 | 3_4:+17657471 | None:intergenic |
| CCAACCCGCAATGAATAGGG+AGG | 0.678708 | 3_4:+17657470 | None:intergenic |
| AATCGTACCAGTCTCTACTG+GGG | 0.711157 | 3_4:-17657110 | Msa0493180:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGAATTTAGTAGATCTTTTT+AGG | - | chr3_4:17657305-17657324 | Msa0493180:intron | 20.0% |
| !!! | ATTCAACATTTTGTTCATTT+GGG | + | chr3_4:17657495-17657514 | None:intergenic | 20.0% |
| !!! | AATTCAACATTTTGTTCATT+TGG | + | chr3_4:17657496-17657515 | None:intergenic | 20.0% |
| ! | TTATTAATGGAATTCCTTGT+CGG | + | chr3_4:17657254-17657273 | None:intergenic | 25.0% |
| !!! | ATTTAGTAGATCTTTTTAGG+AGG | - | chr3_4:17657308-17657327 | Msa0493180:intron | 25.0% |
| ! | TATTGATCCCAAAAAAAAGA+CGG | + | chr3_4:17657409-17657428 | None:intergenic | 25.0% |
| TTATTACCAGTATTCGATAC+TGG | - | chr3_4:17657112-17657131 | Msa0493180:CDS | 30.0% | |
| ! | AATAATCCAGTATCGAATAC+TGG | + | chr3_4:17657121-17657140 | None:intergenic | 30.0% |
| CTTTCTGTAAAATACTCGTT+TGG | + | chr3_4:17657231-17657250 | None:intergenic | 30.0% | |
| CAAGGAATTCCATTAATAAC+TGG | - | chr3_4:17657255-17657274 | Msa0493180:intron | 30.0% | |
| GTTGTTCCAAAGAATCAAAA+CGG | + | chr3_4:17657281-17657300 | None:intergenic | 30.0% | |
| AACCATCGTACTGTAAAAAT+GGG | + | chr3_4:17657360-17657379 | None:intergenic | 30.0% | |
| ! | GGTTTAGCTTACGATGTATT+TGG | - | chr3_4:17657195-17657214 | Msa0493180:intron | 35.0% |
| ! | TATTTTACAGAAAGCCGACA+AGG | - | chr3_4:17657237-17657256 | Msa0493180:intron | 35.0% |
| TCAAAACGGCCAGTTATTAA+TGG | + | chr3_4:17657267-17657286 | None:intergenic | 35.0% | |
| TCGTACTGTAAAAATGGGAT+AGG | + | chr3_4:17657355-17657374 | None:intergenic | 35.0% | |
| !! | ATCCCATTTTTACAGTACGA+TGG | - | chr3_4:17657355-17657374 | Msa0493180:intron | 35.0% |
| CAACCATCGTACTGTAAAAA+TGG | + | chr3_4:17657361-17657380 | None:intergenic | 35.0% | |
| ! | CATTTTTACAGTACGATGGT+TGG | - | chr3_4:17657359-17657378 | Msa0493180:intron | 35.0% |
| ! | ATTCGGATTAGGTTTATCGT+TGG | + | chr3_4:17657449-17657468 | None:intergenic | 35.0% |
| ! | GTAGCTCTATAATTCGGATT+AGG | + | chr3_4:17657460-17657479 | None:intergenic | 35.0% |
| ! | TGTGTCGTAGCTCTATAATT+CGG | + | chr3_4:17657466-17657485 | None:intergenic | 35.0% |
| TATACCCTCCCTATTCATTG+CGG | - | chr3_4:17657152-17657171 | Msa0493180:CDS | 40.0% | |
| TAACCAACCCGCAATGAATA+GGG | + | chr3_4:17657163-17657182 | None:intergenic | 40.0% | |
| ATAACCAACCCGCAATGAAT+AGG | + | chr3_4:17657164-17657183 | None:intergenic | 40.0% | |
| GTAAAATACTCGTTTGGACG+AGG | + | chr3_4:17657225-17657244 | None:intergenic | 40.0% | |
| !!! | AACTGGCCGTTTTGATTCTT+TGG | - | chr3_4:17657272-17657291 | Msa0493180:intron | 40.0% |
| TAGGTCCTATCTATGGTCAT+TGG | + | chr3_4:17657336-17657355 | None:intergenic | 40.0% | |
| AATGGGATAGGTCCTATCTA+TGG | + | chr3_4:17657343-17657362 | None:intergenic | 40.0% | |
| !!! | GTACCCACCGTCTTTTTTTT+GGG | - | chr3_4:17657399-17657418 | Msa0493180:intron | 40.0% |
| GATCCCAAAAAAAAGACGGT+GGG | + | chr3_4:17657405-17657424 | None:intergenic | 40.0% | |
| TGATCCCAAAAAAAAGACGG+TGG | + | chr3_4:17657406-17657425 | None:intergenic | 40.0% | |
| TAATAAACCCCAGTAGAGAC+TGG | + | chr3_4:17657527-17657546 | None:intergenic | 40.0% | |
| ATACCCTCCCTATTCATTGC+GGG | - | chr3_4:17657153-17657172 | Msa0493180:CDS | 45.0% | |
| !! | GGGTTGGTTATTTGTCAGCA+CGG | - | chr3_4:17657173-17657192 | Msa0493180:CDS | 45.0% |
| ! | GGTTGGTTATTTGTCAGCAC+GGG | - | chr3_4:17657174-17657193 | Msa0493180:CDS | 45.0% |
| AGGCTCCAATGACCATAGAT+AGG | - | chr3_4:17657328-17657347 | Msa0493180:intron | 45.0% | |
| !!! | GGTACCCACCGTCTTTTTTT+TGG | - | chr3_4:17657398-17657417 | Msa0493180:intron | 45.0% |
| TGAATCGTACCAGTCTCTAC+TGG | - | chr3_4:17657515-17657534 | Msa0493180:CDS | 45.0% | |
| GAATCGTACCAGTCTCTACT+GGG | - | chr3_4:17657516-17657535 | Msa0493180:CDS | 45.0% | |
| AATCGTACCAGTCTCTACTG+GGG | - | chr3_4:17657517-17657536 | Msa0493180:CDS | 45.0% | |
| CAACCCGCAATGAATAGGGA+GGG | + | chr3_4:17657159-17657178 | None:intergenic | 50.0% | |
| ! | GTACGATGGTTGGCTGTTCA+CGG | - | chr3_4:17657369-17657388 | Msa0493180:intron | 50.0% |
| TATGTGGAGCTCGGCATGTC+TGG | - | chr3_4:17657060-17657079 | Msa0493180:CDS | 55.0% | |
| CCAACCCGCAATGAATAGGG+AGG | + | chr3_4:17657160-17657179 | None:intergenic | 55.0% | |
| CCTCCCTATTCATTGCGGGT+TGG | - | chr3_4:17657157-17657176 | Msa0493180:CDS | 55.0% | |
| !! | GTTGGCTGTTCACGGACTAG+CGG | - | chr3_4:17657377-17657396 | Msa0493180:intron | 55.0% |
| ! | CTCGGCATGTCTGGAAGCAC+AGG | - | chr3_4:17657069-17657088 | Msa0493180:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 17657058 | 17657591 | 17657058 | ID=Msa0493180;Name=Msa0493180 |
| chr3_4 | mRNA | 17657058 | 17657591 | 17657058 | ID=Msa0493180-mRNA-1;Parent=Msa0493180;Name=Msa0493180-mRNA-1;_AED=0.22;_eAED=0.22;_QI=17|0|0|1|0|0|2|0|104 |
| chr3_4 | exon | 17657414 | 17657591 | 17657414 | ID=Msa0493180-mRNA-1:exon:4947;Parent=Msa0493180-mRNA-1 |
| chr3_4 | exon | 17657058 | 17657208 | 17657058 | ID=Msa0493180-mRNA-1:exon:4946;Parent=Msa0493180-mRNA-1 |
| chr3_4 | five_prime_UTR | 17657575 | 17657591 | 17657575 | ID=Msa0493180-mRNA-1:five_prime_utr;Parent=Msa0493180-mRNA-1 |
| chr3_4 | CDS | 17657414 | 17657574 | 17657414 | ID=Msa0493180-mRNA-1:cds;Parent=Msa0493180-mRNA-1 |
| chr3_4 | CDS | 17657058 | 17657208 | 17657058 | ID=Msa0493180-mRNA-1:cds;Parent=Msa0493180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
