Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908450 | AES69829.1 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 2.67e-75 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908450 | sp|A4GYN8|RR12B_POPTR | 95.876 | 97 | 4 | 0 | 61 | 157 | 39 | 135 | 3.89e-61 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095150 | Msa0908450 | 0.804028 | 2.629531e-49 | -8.615850e-47 |
| Msa0126750 | Msa0908450 | 0.815354 | 9.648860e-52 | -8.615850e-47 |
| Msa0202640 | Msa0908450 | 0.856577 | 2.928240e-62 | -8.615850e-47 |
| Msa0370210 | Msa0908450 | 0.802781 | 4.767103e-49 | -8.615850e-47 |
| Msa0405420 | Msa0908450 | 0.860685 | 1.738645e-63 | -8.615850e-47 |
| Msa0405430 | Msa0908450 | 0.861670 | 8.713976e-64 | -8.615850e-47 |
| Msa0405440 | Msa0908450 | 0.925758 | 1.188249e-90 | -8.615850e-47 |
| Msa0405510 | Msa0908450 | 0.854605 | 1.101353e-61 | -8.615850e-47 |
| Msa0405520 | Msa0908450 | 0.844394 | 7.766533e-59 | -8.615850e-47 |
| Msa0405530 | Msa0908450 | 0.933171 | 2.817957e-95 | -8.615850e-47 |
| Msa0263770 | Msa0908450 | 0.883132 | 5.809493e-71 | -8.615850e-47 |
| Msa0268170 | Msa0908450 | 0.814647 | 1.384927e-51 | -8.615850e-47 |
| Msa0268190 | Msa0908450 | 0.815592 | 8.542474e-52 | -8.615850e-47 |
| Msa0268210 | Msa0908450 | 0.821256 | 4.447527e-53 | -8.615850e-47 |
| Msa0268250 | Msa0908450 | 0.849543 | 3.023015e-60 | -8.615850e-47 |
| Msa0268260 | Msa0908450 | 0.848565 | 5.651742e-60 | -8.615850e-47 |
| Msa0268270 | Msa0908450 | 0.936186 | 2.597032e-97 | -8.615850e-47 |
| Msa0268300 | Msa0908450 | 0.893275 | 7.315923e-75 | -8.615850e-47 |
| Msa0268310 | Msa0908450 | 0.850161 | 2.030917e-60 | -8.615850e-47 |
| Msa0268390 | Msa0908450 | 0.811579 | 6.525159e-51 | -8.615850e-47 |
| Msa0268410 | Msa0908450 | 0.813913 | 2.011983e-51 | -8.615850e-47 |
| Msa0268430 | Msa0908450 | 0.828040 | 1.121535e-54 | -8.615850e-47 |
| Msa0268450 | Msa0908450 | 0.827487 | 1.522866e-54 | -8.615850e-47 |
| Msa0268530 | Msa0908450 | 0.802696 | 4.962644e-49 | -8.615850e-47 |
| Msa0268550 | Msa0908450 | 0.814372 | 1.593502e-51 | -8.615850e-47 |
| Msa0268560 | Msa0908450 | 0.828354 | 9.417417e-55 | -8.615850e-47 |
| Msa0268570 | Msa0908450 | 0.840173 | 1.019509e-57 | -8.615850e-47 |
| Msa0268580 | Msa0908450 | 0.816853 | 4.463143e-52 | -8.615850e-47 |
| Msa0268610 | Msa0908450 | 0.804024 | 2.633892e-49 | -8.615850e-47 |
| Msa0268630 | Msa0908450 | 0.844665 | 6.569135e-59 | -8.615850e-47 |
| Msa0268660 | Msa0908450 | 0.802336 | 5.887148e-49 | -8.615850e-47 |
| Msa0268670 | Msa0908450 | 0.817349 | 3.453321e-52 | -8.615850e-47 |
| Msa0268740 | Msa0908450 | 0.836189 | 1.082411e-56 | -8.615850e-47 |
| Msa0268750 | Msa0908450 | 0.853787 | 1.897379e-61 | -8.615850e-47 |
| Msa0268830 | Msa0908450 | 0.863918 | 1.766033e-64 | -8.615850e-47 |
| Msa0268840 | Msa0908450 | 0.820655 | 6.115482e-53 | -8.615850e-47 |
| Msa0268860 | Msa0908450 | 0.823815 | 1.130537e-53 | -8.615850e-47 |
| Msa0268880 | Msa0908450 | 0.814163 | 1.771689e-51 | -8.615850e-47 |
| Msa0268940 | Msa0908450 | 0.810397 | 1.176528e-50 | -8.615850e-47 |
| Msa0268950 | Msa0908450 | 0.828614 | 8.151838e-55 | -8.615850e-47 |
| Msa0268960 | Msa0908450 | 0.855744 | 5.137945e-62 | -8.615850e-47 |
| Msa0269040 | Msa0908450 | 0.865477 | 5.739726e-65 | -8.615850e-47 |
| Msa0269050 | Msa0908450 | 0.823176 | 1.594690e-53 | -8.615850e-47 |
| Msa0269070 | Msa0908450 | 0.823489 | 1.347879e-53 | -8.615850e-47 |
| Msa0269090 | Msa0908450 | 0.806682 | 7.305431e-50 | -8.615850e-47 |
| Msa0269130 | Msa0908450 | 0.823564 | 1.294088e-53 | -8.615850e-47 |
| Msa0269140 | Msa0908450 | 0.864681 | 1.020662e-64 | -8.615850e-47 |
| Msa0269150 | Msa0908450 | 0.963086 | 1.175248e-121 | -8.615850e-47 |
| Msa0344180 | Msa0908450 | 0.808370 | 3.202342e-50 | -8.615850e-47 |
| Msa0344190 | Msa0908450 | 0.821202 | 4.575952e-53 | -8.615850e-47 |
| Msa0344310 | Msa0908450 | 0.848334 | 6.547927e-60 | -8.615850e-47 |
| Msa0484040 | Msa0908450 | 0.819427 | 1.168072e-52 | -8.615850e-47 |
| Msa0582510 | Msa0908450 | 0.852399 | 4.736063e-61 | -8.615850e-47 |
| Msa0582520 | Msa0908450 | 0.809653 | 1.701420e-50 | -8.615850e-47 |
| Msa0582540 | Msa0908450 | 0.821396 | 4.128358e-53 | -8.615850e-47 |
| Msa0582630 | Msa0908450 | 0.813251 | 2.813172e-51 | -8.615850e-47 |
| Msa0582640 | Msa0908450 | 0.825165 | 5.438485e-54 | -8.615850e-47 |
| Msa0582650 | Msa0908450 | 0.844180 | 8.869756e-59 | -8.615850e-47 |
| Msa0582660 | Msa0908450 | 0.802888 | 4.531170e-49 | -8.615850e-47 |
| Msa0582690 | Msa0908450 | 0.860433 | 2.072457e-63 | -8.615850e-47 |
| Msa0582700 | Msa0908450 | 0.819852 | 9.341542e-53 | -8.615850e-47 |
| Msa0582730 | Msa0908450 | 0.817347 | 3.456297e-52 | -8.615850e-47 |
| Msa0582750 | Msa0908450 | 0.802825 | 4.668476e-49 | -8.615850e-47 |
| Msa0582760 | Msa0908450 | 0.832094 | 1.150208e-55 | -8.615850e-47 |
| Msa0582770 | Msa0908450 | 0.847472 | 1.131463e-59 | -8.615850e-47 |
| Msa0582780 | Msa0908450 | 0.804418 | 2.180801e-49 | -8.615850e-47 |
| Msa0582810 | Msa0908450 | 0.860535 | 1.930050e-63 | -8.615850e-47 |
| Msa0582820 | Msa0908450 | 0.806796 | 6.911353e-50 | -8.615850e-47 |
| Msa0582840 | Msa0908450 | 0.813069 | 3.085195e-51 | -8.615850e-47 |
| Msa0582910 | Msa0908450 | 0.840113 | 1.057334e-57 | -8.615850e-47 |
| Msa0582920 | Msa0908450 | 0.853779 | 1.907232e-61 | -8.615850e-47 |
| Msa0591270 | Msa0908450 | 0.804099 | 2.541494e-49 | -8.615850e-47 |
| Msa0591290 | Msa0908450 | 0.820686 | 6.015606e-53 | -8.615850e-47 |
| Msa0591310 | Msa0908450 | 0.868144 | 8.119573e-66 | -8.615850e-47 |
| Msa0591350 | Msa0908450 | 0.912782 | 1.311704e-83 | -8.615850e-47 |
| Msa0591360 | Msa0908450 | 0.843475 | 1.369479e-58 | -8.615850e-47 |
| Msa0591380 | Msa0908450 | 0.842718 | 2.178456e-58 | -8.615850e-47 |
| Msa0867680 | Msa0908450 | 0.896134 | 4.935599e-76 | -8.615850e-47 |
| Msa0867690 | Msa0908450 | 0.865369 | 6.208912e-65 | -8.615850e-47 |
| Msa0876520 | Msa0908450 | 0.850224 | 1.949793e-60 | -8.615850e-47 |
| Msa0908220 | Msa0908450 | 0.861443 | 1.022625e-63 | -8.615850e-47 |
| Msa0908230 | Msa0908450 | 0.888726 | 4.572986e-73 | -8.615850e-47 |
| Msa0908240 | Msa0908450 | 0.964870 | 7.105078e-124 | -8.615850e-47 |
| Msa0908310 | Msa0908450 | 0.913380 | 6.577316e-84 | -8.615850e-47 |
| Msa0908320 | Msa0908450 | 0.855944 | 4.488906e-62 | -8.615850e-47 |
| Msa0908370 | Msa0908450 | 0.916669 | 1.348109e-85 | -8.615850e-47 |
| Msa0908380 | Msa0908450 | 0.844642 | 6.663065e-59 | -8.615850e-47 |
| Msa0908430 | Msa0908450 | 0.877014 | 8.825097e-69 | -8.615850e-47 |
| Msa0908440 | Msa0908450 | 0.905850 | 2.773936e-80 | -8.615850e-47 |
| Msa0908450 | Msa0908480 | 0.869519 | 2.913526e-66 | -8.615850e-47 |
| Msa0908450 | Msa0908530 | 0.937645 | 2.472374e-98 | -8.615850e-47 |
| Msa0908450 | Msa0908540 | 0.861357 | 1.086071e-63 | -8.615850e-47 |
| Msa0908450 | Msa0908590 | 0.862301 | 5.584230e-64 | -8.615850e-47 |
| Msa0908450 | Msa0908600 | 0.856398 | 3.304519e-62 | -8.615850e-47 |
| Msa0908450 | Msa0908610 | 0.962423 | 7.357813e-121 | -8.615850e-47 |
| Msa0908450 | Msa0908650 | 0.871464 | 6.698246e-67 | -8.615850e-47 |
| Msa0908450 | Msa0908660 | 0.859090 | 5.261739e-63 | -8.615850e-47 |
| Msa0908450 | Msa0908670 | 0.964369 | 3.060707e-123 | -8.615850e-47 |
| Msa0908450 | Msa0908720 | 0.925380 | 1.985652e-90 | -8.615850e-47 |
| Msa0908450 | Msa0908730 | 0.833414 | 5.407955e-56 | -8.615850e-47 |
| Msa0908450 | Msa0911190 | 0.911414 | 6.250595e-83 | -8.615850e-47 |
| Msa0908450 | Msa0911200 | 0.842753 | 2.132765e-58 | -8.615850e-47 |
| Msa0908450 | Msa0911230 | 0.881827 | 1.736386e-70 | -8.615850e-47 |
| Msa0908450 | Msa0924830 | 0.835627 | 1.503278e-56 | -8.615850e-47 |
| Msa0908450 | Msa0924870 | 0.812561 | 3.985015e-51 | -8.615850e-47 |
| Msa0908450 | Msa0924880 | 0.839958 | 1.160684e-57 | -8.615850e-47 |
| Msa0908450 | Msa0924920 | 0.871554 | 6.256953e-67 | -8.615850e-47 |
| Msa0908450 | Msa0924930 | 0.852065 | 5.893272e-61 | -8.615850e-47 |
| Msa0908450 | Msa0924940 | 0.866076 | 3.713691e-65 | -8.615850e-47 |
| Msa0908450 | Msa0925100 | 0.920050 | 2.088561e-87 | -8.615850e-47 |
| Msa0908450 | Msa0925110 | 0.888558 | 5.309417e-73 | -8.615850e-47 |
| Msa0908450 | Msa0931070 | 0.838341 | 3.045424e-57 | -8.615850e-47 |
| Msa0908450 | Msa0931080 | 0.801849 | 7.414273e-49 | -8.615850e-47 |
| Msa0908450 | Msa0931110 | 0.808881 | 2.491227e-50 | -8.615850e-47 |
| Msa0908450 | Msa0931130 | 0.848778 | 4.934282e-60 | -8.615850e-47 |
| Msa0908450 | Msa0931160 | 0.808617 | 2.835867e-50 | -8.615850e-47 |
| Msa0908450 | Msa0931220 | 0.822336 | 2.501731e-53 | -8.615850e-47 |
| Msa0908450 | Msa0931230 | 0.833153 | 6.281910e-56 | -8.615850e-47 |
| Msa0908450 | Msa0931260 | 0.864664 | 1.033144e-64 | -8.615850e-47 |
| Msa0908450 | Msa0983630 | 0.898849 | 3.544511e-77 | -8.615850e-47 |
| Msa0908450 | Msa0983640 | 0.852499 | 4.434292e-61 | -8.615850e-47 |
| Msa0908450 | Msa0983720 | 0.804507 | 2.089851e-49 | -8.615850e-47 |
| Msa0908450 | Msa1022050 | 0.915319 | 6.782054e-85 | -8.615850e-47 |
| Msa0908450 | Msa1022060 | 0.848113 | 7.536922e-60 | -8.615850e-47 |
| Msa0908450 | Msa1064410 | 0.858488 | 7.960924e-63 | -8.615850e-47 |
| Msa0908450 | Msa1086080 | 0.815299 | 9.927788e-52 | -8.615850e-47 |
| Msa0908450 | Msa1086090 | 0.850821 | 1.325519e-60 | -8.615850e-47 |
| Msa0908450 | Msa1086140 | 0.850910 | 1.250980e-60 | -8.615850e-47 |
| Msa0908450 | Msa1086150 | 0.805526 | 1.279471e-49 | -8.615850e-47 |
| Msa0908450 | Msa1086190 | 0.833993 | 3.874336e-56 | -8.615850e-47 |
| Msa0908450 | Msa1086200 | 0.861006 | 1.389129e-63 | -8.615850e-47 |
| Msa0908450 | Msa1086250 | 0.811003 | 8.700811e-51 | -8.615850e-47 |
| Msa0908450 | Msa1086270 | 0.837047 | 6.543280e-57 | -8.615850e-47 |
| Msa0908450 | Msa1086280 | 0.806327 | 8.679534e-50 | -8.615850e-47 |
| Msa0908450 | Msa1086300 | 0.807754 | 4.330715e-50 | -8.615850e-47 |
| Msa0908450 | Msa1086320 | 0.808898 | 2.469846e-50 | -8.615850e-47 |
| Msa0908450 | Msa1086380 | 0.815607 | 8.478053e-52 | -8.615850e-47 |
| Msa0908450 | Msa1086430 | 0.800719 | 1.262875e-48 | -8.615850e-47 |
| Msa0908450 | Msa1086450 | 0.812880 | 3.392467e-51 | -8.615850e-47 |
| Msa0908450 | Msa1086470 | 0.830280 | 3.210023e-55 | -8.615850e-47 |
| Msa0908450 | Msa1086510 | 0.813785 | 2.146926e-51 | -8.615850e-47 |
| Msa0908450 | Msa1086550 | 0.840107 | 1.061104e-57 | -8.615850e-47 |
| Msa0908450 | Msa1086590 | 0.814421 | 1.553915e-51 | -8.615850e-47 |
| Msa0908450 | Msa1086600 | 0.876291 | 1.569400e-68 | -8.615850e-47 |
| Msa0908450 | Msa1086670 | 0.804410 | 2.189255e-49 | -8.615850e-47 |
| Msa0908450 | Msa1086680 | 0.800984 | 1.115312e-48 | -8.615850e-47 |
| Msa0908450 | Msa1086720 | 0.867636 | 1.182774e-65 | -8.615850e-47 |
| Msa0908450 | Msa1086730 | 0.885866 | 5.619968e-72 | -8.615850e-47 |
| Msa0908450 | Msa1086740 | 0.951177 | 3.533120e-109 | -8.615850e-47 |
| Msa0908450 | Msa1086790 | 0.924308 | 8.384703e-90 | -8.615850e-47 |
| Msa0908450 | Msa1086800 | 0.868443 | 6.506855e-66 | -8.615850e-47 |
| Msa0908450 | Msa1086860 | 0.814482 | 1.506615e-51 | -8.615850e-47 |
| Msa0908450 | Msa1086880 | 0.818838 | 1.590116e-52 | -8.615850e-47 |
| Msa0908450 | Msa1086890 | 0.822025 | 2.953613e-53 | -8.615850e-47 |
| Msa0908450 | Msa1086900 | 0.849788 | 2.581562e-60 | -8.615850e-47 |
| Msa0908450 | Msa1086910 | 0.800249 | 1.575007e-48 | -8.615850e-47 |
| Msa0908450 | Msa1086960 | 0.932259 | 1.113071e-94 | -8.615850e-47 |
| Msa0908450 | Msa1086970 | 0.848704 | 5.173467e-60 | -8.615850e-47 |
| Msa0908450 | Msa1087030 | 0.856347 | 3.421844e-62 | -8.615850e-47 |
| Msa0908450 | Msa1087040 | 0.867342 | 1.468476e-65 | -8.615850e-47 |
| Msa0908450 | Msa1087050 | 0.950654 | 1.052966e-108 | -8.615850e-47 |
| Msa0908450 | Msa1087110 | 0.941330 | 5.019478e-101 | -8.615850e-47 |
| Msa0908450 | Msa1087120 | 0.844127 | 9.162420e-59 | -8.615850e-47 |
| Msa0908450 | Msa1091700 | 0.806154 | 9.440987e-50 | -8.615850e-47 |
| Msa0908450 | Msa1143120 | 0.850037 | 2.199065e-60 | -8.615850e-47 |
| Msa0908450 | Msa1143160 | 0.810717 | 1.003094e-50 | -8.615850e-47 |
| Msa0908450 | Msa1143170 | 0.840927 | 6.475238e-58 | -8.615850e-47 |
| Msa0908450 | Msa1305090 | 0.843388 | 1.445139e-58 | -8.615850e-47 |
| Msa0908450 | Msa1354420 | 0.924581 | 5.814585e-90 | -8.615850e-47 |
| Msa0908450 | Msa1354430 | 0.853810 | 1.868466e-61 | -8.615850e-47 |
| Msa0908450 | Msa1354480 | 0.859248 | 4.717896e-63 | -8.615850e-47 |
| Msa0908450 | Msa1354490 | 0.877389 | 6.536428e-69 | -8.615850e-47 |
| Msa0908450 | Msa1354500 | 0.955616 | 2.013051e-113 | -8.615850e-47 |
| Msa0908450 | Msa1354550 | 0.931976 | 1.700411e-94 | -8.615850e-47 |
| Msa0908450 | Msa1354560 | 0.850100 | 2.112646e-60 | -8.615850e-47 |
| Msa0908450 | Msa1354610 | 0.882846 | 7.394818e-71 | -8.615850e-47 |
| Msa0908450 | Msa1354620 | 0.877862 | 4.471017e-69 | -8.615850e-47 |
| Msa0908450 | Msa1354630 | 0.957496 | 2.356182e-115 | -8.615850e-47 |
| Msa0908450 | Msa1354680 | 0.928818 | 1.685134e-92 | -8.615850e-47 |
| Msa0908450 | Msa1354690 | 0.891647 | 3.281680e-74 | -8.615850e-47 |
| Msa0908450 | Msa1354700 | 0.846381 | 2.251071e-59 | -8.615850e-47 |
| Msa0908450 | Msa1354740 | 0.876225 | 1.653792e-68 | -8.615850e-47 |
| Msa0908450 | Msa1354750 | 0.880800 | 4.070733e-70 | -8.615850e-47 |
| Msa0908450 | Msa1354760 | 0.956405 | 3.190497e-114 | -8.615850e-47 |
| Msa0908450 | Msa1354810 | 0.933589 | 1.489543e-95 | -8.615850e-47 |
| Msa0908450 | Msa1354820 | 0.862651 | 4.357358e-64 | -8.615850e-47 |
| Msa0908450 | Msa1354910 | 0.823044 | 1.712271e-53 | -8.615850e-47 |
| Msa0908450 | Msa1354920 | 0.850323 | 1.828535e-60 | -8.615850e-47 |
| Msa0908450 | Msa1354930 | 0.800790 | 1.221532e-48 | -8.615850e-47 |
| Msa0908450 | Msa1354980 | 0.931857 | 2.029903e-94 | -8.615850e-47 |
| Msa0908450 | Msa1354990 | 0.871648 | 5.824985e-67 | -8.615850e-47 |
| Msa0908450 | Msa1355080 | 0.833404 | 5.437169e-56 | -8.615850e-47 |
| Msa0908450 | Msa1355090 | 0.849187 | 3.798437e-60 | -8.615850e-47 |
| Msa0908450 | Msa1355100 | 0.808522 | 2.971706e-50 | -8.615850e-47 |
| Msa0908450 | Msa1365890 | 0.908410 | 1.763612e-81 | -8.615850e-47 |
| Msa0908450 | Msa1365900 | 0.828117 | 1.074468e-54 | -8.615850e-47 |
| Msa0908450 | Msa1365950 | 0.857841 | 1.239765e-62 | -8.615850e-47 |
| Msa0908450 | Msa1365960 | 0.836297 | 1.016212e-56 | -8.615850e-47 |
| Msa0908450 | Msa1365970 | 0.934707 | 2.662385e-96 | -8.615850e-47 |
| Msa0908450 | Msa1366080 | 0.914256 | 2.373448e-84 | -8.615850e-47 |
| Msa0908450 | Msa1366090 | 0.837439 | 5.194829e-57 | -8.615850e-47 |
| Msa0908450 | Msa1368230 | 0.866293 | 3.170395e-65 | -8.615850e-47 |
| Msa0908450 | Msa1368240 | 0.938479 | 6.292595e-99 | -8.615850e-47 |
| Msa0908450 | Msa1380610 | 0.818126 | 2.305729e-52 | -8.615850e-47 |
| Msa0908450 | Msa1380620 | 0.821726 | 3.463244e-53 | -8.615850e-47 |
| Msa0908450 | Msa1380680 | 0.803812 | 2.915831e-49 | -8.615850e-47 |
| Msa0908450 | Msa1385410 | 0.883680 | 3.656395e-71 | -8.615850e-47 |
| Msa0908450 | Msa1385420 | 0.824142 | 9.471710e-54 | -8.615850e-47 |
| Msa0908450 | Msa1391090 | 0.850550 | 1.579746e-60 | -8.615850e-47 |
| Msa0908450 | Msa1391100 | 0.865760 | 4.673233e-65 | -8.615850e-47 |
| Msa0908450 | Msa1391110 | 0.950397 | 1.791252e-108 | -8.615850e-47 |
| Msa0908450 | Msa1391160 | 0.882644 | 8.766148e-71 | -8.615850e-47 |
| Msa0908450 | Msa1391170 | 0.859950 | 2.901452e-63 | -8.615850e-47 |
| Msa0908450 | Msa1391220 | 0.851893 | 6.593946e-61 | -8.615850e-47 |
| Msa0908450 | Msa1391230 | 0.848458 | 6.052501e-60 | -8.615850e-47 |
| Msa0908450 | Msa1391240 | 0.939586 | 9.902269e-100 | -8.615850e-47 |
| Msa0908450 | Msa1394030 | 0.848256 | 6.881386e-60 | -8.615850e-47 |
| Msa0908450 | Msa1394040 | 0.848496 | 5.908229e-60 | -8.615850e-47 |
| Msa0908450 | Msa1394150 | 0.825743 | 3.969751e-54 | -8.615850e-47 |
| Msa0908450 | Msa1394160 | 0.845671 | 3.511584e-59 | -8.615850e-47 |
| Msa0908450 | Msa1394210 | 0.837854 | 4.066348e-57 | -8.615850e-47 |
| Msa0908450 | Msa1394250 | 0.808685 | 2.743334e-50 | -8.615850e-47 |
| Msa0908450 | Msa1460120 | 0.861020 | 1.375506e-63 | -8.615850e-47 |
| Msa0908450 | Msa1460130 | 0.870870 | 1.052301e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908450 | MtrunA17_Chr7g0234981 | 88.636 | 88 | 10 | 0 | 70 | 157 | 6 | 93 | 2.85e-50 | 156 |
| Msa0908450 | MtrunA17_MTg0491661 | 67.470 | 83 | 27 | 0 | 75 | 157 | 41 | 123 | 8.51e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908450 | ATCG00905.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa0908450 | ATCG01230.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa0908450 | AT2G07675.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
| Msa0908450 | ATMG00980.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
Find 39 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGCTAAAATAATTTATTT+TGG | 0.180484 | 6_2:+9606758 | None:intergenic |
| CAACAAGGTCGTTCTAAATA+TGG | 0.216871 | 6_2:-9606791 | Msa0908450:CDS |
| CAGAATGTTCTTGTAAATTA+TGG | 0.231614 | 6_2:+9606909 | None:intergenic |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 6_2:-9607752 | Msa0908450:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 6_2:+9606819 | None:intergenic |
| ACTTTACGTAAGGCAGAGTT+TGG | 0.377633 | 6_2:+9606989 | None:intergenic |
| AACAAGGTCGTTCTAAATAT+GGG | 0.408379 | 6_2:-9606790 | Msa0908450:CDS |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 6_2:+9606792 | None:intergenic |
| TTGTAAATTATGGCCAATAC+CGG | 0.438557 | 6_2:+9606919 | None:intergenic |
| CATTCTGTAGTCTTAGTAAG+AGG | 0.441296 | 6_2:-9606893 | Msa0908450:CDS |
| TATCACTACAACAAGCATAA+TGG | 0.443035 | 6_2:-9607958 | Msa0908450:intron |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | 6_2:+9608084 | None:intergenic |
| GCCAGAGTACGCTTAACCTC+TGG | 0.485872 | 6_2:-9606965 | Msa0908450:CDS |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 6_2:+9607760 | None:intergenic |
| ACTGCTTATATACCCGGTAT+TGG | 0.491318 | 6_2:-9606932 | Msa0908450:CDS |
| GATCGTTGGCACAAGAAAGA+AGG | 0.502174 | 6_2:+9608110 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 6_2:+9606820 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 6_2:-9606819 | Msa0908450:CDS |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | 6_2:+9608096 | None:intergenic |
| AAATGGATAAATCAGAACTA+AGG | 0.516319 | 6_2:-9608152 | Msa0908450:CDS |
| AGAACTAAGGCAAGATGAGA+TGG | 0.530899 | 6_2:-9608139 | Msa0908450:CDS |
| TACTCTGGCAACTTTACGTA+AGG | 0.546111 | 6_2:+9606979 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 6_2:-9606892 | Msa0908450:CDS |
| GGTTCTGTAGAGTGGCAGTA+AGG | 0.572203 | 6_2:-9607053 | Msa0908450:intron |
| TCCAGAGGTTAAGCGTACTC+TGG | 0.572579 | 6_2:+9606964 | None:intergenic |
| GAAATCACTGCTTATATACC+CGG | 0.578898 | 6_2:-9606938 | Msa0908450:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 6_2:-9606845 | Msa0908450:CDS |
| ATCGTTGGCACAAGAAAGAA+GGG | 0.587101 | 6_2:+9608111 | None:intergenic |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 6_2:-9607744 | Msa0908450:intron |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 6_2:-9606891 | Msa0908450:CDS |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 6_2:-9606806 | Msa0908450:CDS |
| TGTAAATTATGGCCAATACC+GGG | 0.601960 | 6_2:+9606920 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 6_2:-9606827 | Msa0908450:CDS |
| AGCAGTGATTTCAAATCCAG+AGG | 0.620729 | 6_2:+9606949 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 6_2:+9607770 | None:intergenic |
| ACAAGGTCGTTCTAAATATG+GGG | 0.627597 | 6_2:-9606789 | Msa0908450:CDS |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 6_2:-9606869 | Msa0908450:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 6_2:-9606890 | Msa0908450:CDS |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 6_2:+9606851 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr6_2:9606916-9606935 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr6_2:9606917-9606936 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr6_2:9606920-9606939 | Msa0908450:CDS | 10.0% |
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr6_2:9606916-9606935 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr6_2:9606917-9606936 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr6_2:9606920-9606939 | Msa0908450:CDS | 10.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr6_2:9607355-9607374 | Msa0908450:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr6_2:9607355-9607374 | Msa0908450:intron | 15.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr6_2:9607098-9607117 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr6_2:9607716-9607735 | Msa0908450:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr6_2:9607761-9607780 | Msa0908450:CDS | 20.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr6_2:9607098-9607117 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr6_2:9607716-9607735 | Msa0908450:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr6_2:9607761-9607780 | Msa0908450:CDS | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr6_2:9606875-9606894 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr6_2:9606876-9606895 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr6_2:9606996-9607015 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr6_2:9606997-9607016 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr6_2:9606998-9607017 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr6_2:9607099-9607118 | Msa0908450:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr6_2:9607104-9607123 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr6_2:9607241-9607260 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr6_2:9607463-9607482 | Msa0908450:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr6_2:9607539-9607558 | Msa0908450:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr6_2:9607540-9607559 | Msa0908450:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr6_2:9607607-9607626 | Msa0908450:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr6_2:9607617-9607636 | Msa0908450:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr6_2:9607680-9607699 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr6_2:9607762-9607781 | Msa0908450:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr6_2:9607816-9607835 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr6_2:9608016-9608035 | None:intergenic | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr6_2:9606875-9606894 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr6_2:9606876-9606895 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr6_2:9606996-9607015 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr6_2:9606997-9607016 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr6_2:9606998-9607017 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr6_2:9607099-9607118 | Msa0908450:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr6_2:9607104-9607123 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr6_2:9607241-9607260 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr6_2:9607463-9607482 | Msa0908450:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr6_2:9607539-9607558 | Msa0908450:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr6_2:9607540-9607559 | Msa0908450:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr6_2:9607607-9607626 | Msa0908450:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr6_2:9607617-9607636 | Msa0908450:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr6_2:9607680-9607699 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr6_2:9607762-9607781 | Msa0908450:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr6_2:9607816-9607835 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr6_2:9608016-9608035 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr6_2:9606870-9606889 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr6_2:9606910-9606929 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr6_2:9606964-9606983 | Msa0908450:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr6_2:9607041-9607060 | Msa0908450:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr6_2:9607596-9607615 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr6_2:9607597-9607616 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr6_2:9607595-9607614 | Msa0908450:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr6_2:9607612-9607631 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr6_2:9607610-9607629 | Msa0908450:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr6_2:9607616-9607635 | Msa0908450:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr6_2:9608006-9608025 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr6_2:9608030-9608049 | Msa0908450:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr6_2:9608132-9608151 | Msa0908450:CDS | 30.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr6_2:9606870-9606889 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr6_2:9606910-9606929 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr6_2:9606964-9606983 | Msa0908450:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr6_2:9607041-9607060 | Msa0908450:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr6_2:9607596-9607615 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr6_2:9607597-9607616 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr6_2:9607595-9607614 | Msa0908450:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr6_2:9607612-9607631 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr6_2:9607610-9607629 | Msa0908450:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr6_2:9607616-9607635 | Msa0908450:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr6_2:9608006-9608025 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr6_2:9608030-9608049 | Msa0908450:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr6_2:9608132-9608151 | Msa0908450:CDS | 30.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr6_2:9606909-9606928 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr6_2:9607028-9607047 | Msa0908450:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr6_2:9607034-9607053 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr6_2:9607132-9607151 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr6_2:9607394-9607413 | Msa0908450:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr6_2:9607422-9607441 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr6_2:9607594-9607613 | Msa0908450:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr6_2:9607818-9607837 | Msa0908450:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr6_2:9607846-9607865 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr6_2:9607848-9607867 | Msa0908450:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr6_2:9607916-9607935 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr6_2:9607926-9607945 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr6_2:9607927-9607946 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr6_2:9607984-9608003 | Msa0908450:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr6_2:9608005-9608024 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr6_2:9608029-9608048 | Msa0908450:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr6_2:9608031-9608050 | Msa0908450:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr6_2:9608133-9608152 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr6_2:9608131-9608150 | Msa0908450:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr6_2:9608133-9608152 | Msa0908450:CDS | 35.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr6_2:9606909-9606928 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr6_2:9607028-9607047 | Msa0908450:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr6_2:9607034-9607053 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr6_2:9607132-9607151 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr6_2:9607394-9607413 | Msa0908450:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr6_2:9607422-9607441 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr6_2:9607594-9607613 | Msa0908450:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr6_2:9607818-9607837 | Msa0908450:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr6_2:9607846-9607865 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr6_2:9607848-9607867 | Msa0908450:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr6_2:9607916-9607935 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr6_2:9607926-9607945 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr6_2:9607927-9607946 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr6_2:9607984-9608003 | Msa0908450:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr6_2:9608005-9608024 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr6_2:9608029-9608048 | Msa0908450:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr6_2:9608031-9608050 | Msa0908450:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr6_2:9608133-9608152 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr6_2:9608131-9608150 | Msa0908450:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr6_2:9608133-9608152 | Msa0908450:CDS | 35.0% |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr6_2:9606783-9606802 | Msa0908450:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr6_2:9606814-9606833 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr6_2:9606829-9606848 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr6_2:9606834-9606853 | Msa0908450:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr6_2:9606841-9606860 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr6_2:9606908-9606927 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr6_2:9607027-9607046 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr6_2:9607081-9607100 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr6_2:9607085-9607104 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr6_2:9607206-9607225 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr6_2:9607205-9607224 | Msa0908450:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr6_2:9607552-9607571 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr6_2:9607573-9607592 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr6_2:9607766-9607785 | Msa0908450:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr6_2:9607925-9607944 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr6_2:9607936-9607955 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr6_2:9607946-9607965 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr6_2:9607976-9607995 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr6_2:9607990-9608009 | Msa0908450:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr6_2:9608032-9608051 | Msa0908450:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr6_2:9608074-9608093 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr6_2:9608077-9608096 | Msa0908450:intron | 40.0% | |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr6_2:9606783-9606802 | Msa0908450:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr6_2:9606814-9606833 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr6_2:9606829-9606848 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr6_2:9606834-9606853 | Msa0908450:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr6_2:9606841-9606860 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr6_2:9606908-9606927 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr6_2:9607027-9607046 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr6_2:9607081-9607100 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr6_2:9607085-9607104 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr6_2:9607206-9607225 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr6_2:9607205-9607224 | Msa0908450:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr6_2:9607552-9607571 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr6_2:9607573-9607592 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr6_2:9607766-9607785 | Msa0908450:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr6_2:9607925-9607944 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr6_2:9607936-9607955 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr6_2:9607946-9607965 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr6_2:9607976-9607995 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr6_2:9607990-9608009 | Msa0908450:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr6_2:9608032-9608051 | Msa0908450:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr6_2:9608074-9608093 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr6_2:9608077-9608096 | Msa0908450:intron | 40.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr6_2:9606815-9606834 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr6_2:9606907-9606926 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr6_2:9607119-9607138 | Msa0908450:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr6_2:9607123-9607142 | Msa0908450:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr6_2:9607129-9607148 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr6_2:9607177-9607196 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr6_2:9607178-9607197 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr6_2:9607179-9607198 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr6_2:9607178-9607197 | Msa0908450:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr6_2:9607523-9607542 | Msa0908450:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr6_2:9607627-9607646 | Msa0908450:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr6_2:9607771-9607790 | Msa0908450:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr6_2:9607788-9607807 | Msa0908450:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr6_2:9607861-9607880 | Msa0908450:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr6_2:9608036-9608055 | Msa0908450:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr6_2:9608037-9608056 | Msa0908450:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr6_2:9608053-9608072 | Msa0908450:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr6_2:9608105-9608124 | None:intergenic | 45.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr6_2:9606815-9606834 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr6_2:9606907-9606926 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr6_2:9607119-9607138 | Msa0908450:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr6_2:9607123-9607142 | Msa0908450:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr6_2:9607129-9607148 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr6_2:9607177-9607196 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr6_2:9607178-9607197 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr6_2:9607179-9607198 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr6_2:9607178-9607197 | Msa0908450:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr6_2:9607523-9607542 | Msa0908450:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr6_2:9607627-9607646 | Msa0908450:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr6_2:9607771-9607790 | Msa0908450:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr6_2:9607788-9607807 | Msa0908450:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr6_2:9607861-9607880 | Msa0908450:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr6_2:9608036-9608055 | Msa0908450:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr6_2:9608037-9608056 | Msa0908450:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr6_2:9608053-9608072 | Msa0908450:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr6_2:9608105-9608124 | None:intergenic | 45.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr6_2:9606906-9606925 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr6_2:9607555-9607574 | Msa0908450:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr6_2:9607830-9607849 | Msa0908450:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr6_2:9607869-9607888 | Msa0908450:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr6_2:9607961-9607980 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr6_2:9608043-9608062 | Msa0908450:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr6_2:9608106-9608125 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr6_2:9608103-9608122 | Msa0908450:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr6_2:9608116-9608135 | Msa0908450:CDS | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr6_2:9606906-9606925 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr6_2:9607555-9607574 | Msa0908450:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr6_2:9607830-9607849 | Msa0908450:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr6_2:9607869-9607888 | Msa0908450:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr6_2:9607961-9607980 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr6_2:9608043-9608062 | Msa0908450:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr6_2:9608106-9608125 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr6_2:9608103-9608122 | Msa0908450:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr6_2:9608116-9608135 | Msa0908450:CDS | 50.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr6_2:9606904-9606923 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr6_2:9606905-9606924 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr6_2:9607505-9607524 | Msa0908450:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr6_2:9607506-9607525 | Msa0908450:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr6_2:9607514-9607533 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr6_2:9607957-9607976 | Msa0908450:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr6_2:9608095-9608114 | Msa0908450:intron | 55.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr6_2:9606904-9606923 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr6_2:9606905-9606924 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr6_2:9607505-9607524 | Msa0908450:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr6_2:9607506-9607525 | Msa0908450:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr6_2:9607514-9607533 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr6_2:9607957-9607976 | Msa0908450:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr6_2:9608095-9608114 | Msa0908450:intron | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr6_2:9607155-9607174 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr6_2:9607172-9607191 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr6_2:9607170-9607189 | Msa0908450:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr6_2:9607510-9607529 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr6_2:9607507-9607526 | Msa0908450:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr6_2:9607511-9607530 | None:intergenic | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr6_2:9607155-9607174 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr6_2:9607172-9607191 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr6_2:9607170-9607189 | Msa0908450:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr6_2:9607510-9607529 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr6_2:9607507-9607526 | Msa0908450:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr6_2:9607511-9607530 | None:intergenic | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr6_2:9607165-9607184 | None:intergenic | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr6_2:9607165-9607184 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 9606772 | 9608172 | 9606772 | ID=Msa0908450;Name=Msa0908450 |
| chr6_2 | mRNA | 9606772 | 9608172 | 9606772 | ID=Msa0908450-mRNA-1;Parent=Msa0908450;Name=Msa0908450-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|157 |
| chr6_2 | exon | 9608096 | 9608172 | 9608096 | ID=Msa0908450-mRNA-1:exon:2348;Parent=Msa0908450-mRNA-1 |
| chr6_2 | exon | 9607959 | 9608002 | 9607959 | ID=Msa0908450-mRNA-1:exon:2347;Parent=Msa0908450-mRNA-1 |
| chr6_2 | exon | 9607745 | 9607803 | 9607745 | ID=Msa0908450-mRNA-1:exon:2346;Parent=Msa0908450-mRNA-1 |
| chr6_2 | exon | 9606772 | 9607065 | 9606772 | ID=Msa0908450-mRNA-1:exon:2345;Parent=Msa0908450-mRNA-1 |
| chr6_2 | CDS | 9608096 | 9608172 | 9608096 | ID=Msa0908450-mRNA-1:cds;Parent=Msa0908450-mRNA-1 |
| chr6_2 | CDS | 9607959 | 9608002 | 9607959 | ID=Msa0908450-mRNA-1:cds;Parent=Msa0908450-mRNA-1 |
| chr6_2 | CDS | 9607745 | 9607803 | 9607745 | ID=Msa0908450-mRNA-1:cds;Parent=Msa0908450-mRNA-1 |
| chr6_2 | CDS | 9606772 | 9607065 | 9606772 | ID=Msa0908450-mRNA-1:cds;Parent=Msa0908450-mRNA-1 |
| Gene Sequence |
| Protein sequence |
