Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086740 | AES69829.1 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 2.67e-75 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086740 | sp|A4GYN8|RR12B_POPTR | 95.876 | 97 | 4 | 0 | 61 | 157 | 39 | 135 | 3.89e-61 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086740 | G7J101 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 1.28e-75 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0095210 | Msa1086740 | 0.801714 | 7.903777e-49 | -8.615850e-47 |
| Msa0126730 | Msa1086740 | 0.802500 | 5.448019e-49 | -8.615850e-47 |
| Msa0126750 | Msa1086740 | 0.831895 | 1.287873e-55 | -8.615850e-47 |
| Msa0202640 | Msa1086740 | 0.846589 | 1.975949e-59 | -8.615850e-47 |
| Msa0370210 | Msa1086740 | 0.810324 | 1.220009e-50 | -8.615850e-47 |
| Msa0405420 | Msa1086740 | 0.864387 | 1.260962e-64 | -8.615850e-47 |
| Msa0405430 | Msa1086740 | 0.859935 | 2.931276e-63 | -8.615850e-47 |
| Msa0405440 | Msa1086740 | 0.937211 | 5.002897e-98 | -8.615850e-47 |
| Msa0405510 | Msa1086740 | 0.857303 | 1.789872e-62 | -8.615850e-47 |
| Msa0405520 | Msa1086740 | 0.843450 | 1.390700e-58 | -8.615850e-47 |
| Msa0405530 | Msa1086740 | 0.937813 | 1.880051e-98 | -8.615850e-47 |
| Msa0983630 | Msa1086740 | 0.891017 | 5.830657e-74 | -8.615850e-47 |
| Msa0983640 | Msa1086740 | 0.827330 | 1.660822e-54 | -8.615850e-47 |
| Msa1022050 | Msa1086740 | 0.897306 | 1.597304e-76 | -8.615850e-47 |
| Msa1022060 | Msa1086740 | 0.836671 | 8.161974e-57 | -8.615850e-47 |
| Msa1064410 | Msa1086740 | 0.870918 | 1.014564e-66 | -8.615850e-47 |
| Msa1086080 | Msa1086740 | 0.817644 | 2.963683e-52 | -8.615850e-47 |
| Msa1086090 | Msa1086740 | 0.849591 | 2.931839e-60 | -8.615850e-47 |
| Msa1086140 | Msa1086740 | 0.844508 | 7.239127e-59 | -8.615850e-47 |
| Msa1086190 | Msa1086740 | 0.841222 | 5.415395e-58 | -8.615850e-47 |
| Msa1086200 | Msa1086740 | 0.859603 | 3.689086e-63 | -8.615850e-47 |
| Msa1086270 | Msa1086740 | 0.845064 | 5.126101e-59 | -8.615850e-47 |
| Msa1086300 | Msa1086740 | 0.809339 | 1.986766e-50 | -8.615850e-47 |
| Msa1086380 | Msa1086740 | 0.800100 | 1.688374e-48 | -8.615850e-47 |
| Msa1086470 | Msa1086740 | 0.800294 | 1.541834e-48 | -8.615850e-47 |
| Msa1086510 | Msa1086740 | 0.804503 | 2.093893e-49 | -8.615850e-47 |
| Msa1086550 | Msa1086740 | 0.840914 | 6.523373e-58 | -8.615850e-47 |
| Msa1086590 | Msa1086740 | 0.821357 | 4.216119e-53 | -8.615850e-47 |
| Msa1086600 | Msa1086740 | 0.855428 | 6.352567e-62 | -8.615850e-47 |
| Msa1086670 | Msa1086740 | 0.806079 | 9.792125e-50 | -8.615850e-47 |
| Msa1086720 | Msa1086740 | 0.863168 | 3.018556e-64 | -8.615850e-47 |
| Msa1086730 | Msa1086740 | 0.881079 | 3.232619e-70 | -8.615850e-47 |
| Msa1086740 | Msa1086790 | 0.917938 | 2.882884e-86 | -8.615850e-47 |
| Msa1086740 | Msa1086800 | 0.855501 | 6.045523e-62 | -8.615850e-47 |
| Msa1086740 | Msa1086860 | 0.807703 | 4.439524e-50 | -8.615850e-47 |
| Msa1086740 | Msa1086880 | 0.802584 | 5.233983e-49 | -8.615850e-47 |
| Msa1086740 | Msa1086890 | 0.819747 | 9.871579e-53 | -8.615850e-47 |
| Msa1086740 | Msa1086900 | 0.848477 | 5.980364e-60 | -8.615850e-47 |
| Msa1086740 | Msa1086960 | 0.929410 | 7.233920e-93 | -8.615850e-47 |
| Msa1086740 | Msa1086970 | 0.819885 | 9.184019e-53 | -8.615850e-47 |
| Msa1086740 | Msa1087030 | 0.852103 | 5.747960e-61 | -8.615850e-47 |
| Msa1086740 | Msa1087040 | 0.855967 | 4.419781e-62 | -8.615850e-47 |
| Msa1086740 | Msa1087050 | 0.958553 | 1.773577e-116 | -8.615850e-47 |
| Msa1086740 | Msa1087110 | 0.935469 | 8.079117e-97 | -8.615850e-47 |
| Msa1086740 | Msa1087120 | 0.827872 | 1.230598e-54 | -8.615850e-47 |
| Msa1086740 | Msa1091700 | 0.801106 | 1.052756e-48 | -8.615850e-47 |
| Msa1086740 | Msa1143120 | 0.857810 | 1.266513e-62 | -8.615850e-47 |
| Msa1086740 | Msa1143170 | 0.849695 | 2.741268e-60 | -8.615850e-47 |
| Msa1086740 | Msa1305090 | 0.831923 | 1.267394e-55 | -8.615850e-47 |
| Msa1086740 | Msa1354420 | 0.920108 | 1.942387e-87 | -8.615850e-47 |
| Msa1086740 | Msa1354430 | 0.853269 | 2.672279e-61 | -8.615850e-47 |
| Msa1086740 | Msa1354480 | 0.844911 | 5.636563e-59 | -8.615850e-47 |
| Msa1086740 | Msa1354490 | 0.865228 | 6.876695e-65 | -8.615850e-47 |
| Msa1086740 | Msa1354500 | 0.956575 | 2.132509e-114 | -8.615850e-47 |
| Msa1086740 | Msa1354550 | 0.912668 | 1.496682e-83 | -8.615850e-47 |
| Msa1086740 | Msa1354560 | 0.842483 | 2.514976e-58 | -8.615850e-47 |
| Msa1086740 | Msa1354610 | 0.873378 | 1.540883e-67 | -8.615850e-47 |
| Msa1086740 | Msa1354620 | 0.857884 | 1.203992e-62 | -8.615850e-47 |
| Msa1086740 | Msa1354630 | 0.952668 | 1.473196e-110 | -8.615850e-47 |
| Msa1086740 | Msa1354680 | 0.937374 | 3.841065e-98 | -8.615850e-47 |
| Msa1086740 | Msa1354690 | 0.875191 | 3.742128e-68 | -8.615850e-47 |
| Msa1086740 | Msa1354700 | 0.832517 | 9.034932e-56 | -8.615850e-47 |
| Msa1086740 | Msa1354740 | 0.860095 | 2.623038e-63 | -8.615850e-47 |
| Msa1086740 | Msa1354750 | 0.867888 | 9.818949e-66 | -8.615850e-47 |
| Msa1086740 | Msa1354760 | 0.957269 | 4.081061e-115 | -8.615850e-47 |
| Msa1086740 | Msa1354810 | 0.910969 | 1.032337e-82 | -8.615850e-47 |
| Msa1086740 | Msa1354820 | 0.847646 | 1.013505e-59 | -8.615850e-47 |
| Msa1086740 | Msa1354910 | 0.833764 | 4.421161e-56 | -8.615850e-47 |
| Msa1086740 | Msa1354920 | 0.856855 | 2.425943e-62 | -8.615850e-47 |
| Msa1086740 | Msa1354980 | 0.916565 | 1.527898e-85 | -8.615850e-47 |
| Msa1086740 | Msa1354990 | 0.847281 | 1.277037e-59 | -8.615850e-47 |
| Msa1086740 | Msa1355080 | 0.840090 | 1.072110e-57 | -8.615850e-47 |
| Msa1086740 | Msa1355090 | 0.853546 | 2.225510e-61 | -8.615850e-47 |
| Msa1086740 | Msa1365890 | 0.899916 | 1.233517e-77 | -8.615850e-47 |
| Msa1086740 | Msa1365900 | 0.827360 | 1.633020e-54 | -8.615850e-47 |
| Msa1086740 | Msa1365950 | 0.843429 | 1.408768e-58 | -8.615850e-47 |
| Msa1086740 | Msa1365960 | 0.826623 | 2.450623e-54 | -8.615850e-47 |
| Msa1086740 | Msa1365970 | 0.938764 | 3.920586e-99 | -8.615850e-47 |
| Msa1086740 | Msa1366080 | 0.893743 | 4.730012e-75 | -8.615850e-47 |
| Msa1086740 | Msa1366090 | 0.815902 | 7.285301e-52 | -8.615850e-47 |
| Msa1086740 | Msa1368230 | 0.863304 | 2.739928e-64 | -8.615850e-47 |
| Msa1086740 | Msa1368240 | 0.939618 | 9.386424e-100 | -8.615850e-47 |
| Msa1086740 | Msa1380600 | 0.808432 | 3.106457e-50 | -8.615850e-47 |
| Msa1086740 | Msa1380610 | 0.821903 | 3.152374e-53 | -8.615850e-47 |
| Msa1086740 | Msa1385410 | 0.875523 | 2.882561e-68 | -8.615850e-47 |
| Msa1086740 | Msa1385420 | 0.825836 | 3.771639e-54 | -8.615850e-47 |
| Msa1086740 | Msa1391090 | 0.831925 | 1.266167e-55 | -8.615850e-47 |
| Msa1086740 | Msa1391100 | 0.859188 | 4.915664e-63 | -8.615850e-47 |
| Msa1086740 | Msa1391110 | 0.945533 | 2.557771e-104 | -8.615850e-47 |
| Msa1086740 | Msa1391160 | 0.864867 | 8.926614e-65 | -8.615850e-47 |
| Msa1086740 | Msa1391170 | 0.843346 | 1.482489e-58 | -8.615850e-47 |
| Msa1086740 | Msa1391220 | 0.833492 | 5.169340e-56 | -8.615850e-47 |
| Msa1086740 | Msa1391230 | 0.840328 | 9.291701e-58 | -8.615850e-47 |
| Msa1086740 | Msa1391240 | 0.933587 | 1.495814e-95 | -8.615850e-47 |
| Msa1086740 | Msa1394030 | 0.858094 | 1.043094e-62 | -8.615850e-47 |
| Msa1086740 | Msa1394040 | 0.843091 | 1.733467e-58 | -8.615850e-47 |
| Msa1086740 | Msa1394150 | 0.824731 | 6.887611e-54 | -8.615850e-47 |
| Msa1086740 | Msa1394160 | 0.836511 | 8.966851e-57 | -8.615850e-47 |
| Msa1086740 | Msa1394210 | 0.850897 | 1.261587e-60 | -8.615850e-47 |
| Msa1086740 | Msa1460120 | 0.861518 | 9.695789e-64 | -8.615850e-47 |
| Msa1086740 | Msa1460130 | 0.870586 | 1.305163e-66 | -8.615850e-47 |
| Msa0263770 | Msa1086740 | 0.882119 | 1.361134e-70 | -8.615850e-47 |
| Msa0268190 | Msa1086740 | 0.809743 | 1.627591e-50 | -8.615850e-47 |
| Msa0268210 | Msa1086740 | 0.814794 | 1.285103e-51 | -8.615850e-47 |
| Msa0268250 | Msa1086740 | 0.834075 | 3.696595e-56 | -8.615850e-47 |
| Msa0268260 | Msa1086740 | 0.842613 | 2.324327e-58 | -8.615850e-47 |
| Msa0268270 | Msa1086740 | 0.950616 | 1.138737e-108 | -8.615850e-47 |
| Msa0268300 | Msa1086740 | 0.886850 | 2.388159e-72 | -8.615850e-47 |
| Msa0268310 | Msa1086740 | 0.833045 | 6.680994e-56 | -8.615850e-47 |
| Msa0268410 | Msa1086740 | 0.803300 | 3.723118e-49 | -8.615850e-47 |
| Msa0268430 | Msa1086740 | 0.819286 | 1.257922e-52 | -8.615850e-47 |
| Msa0268450 | Msa1086740 | 0.813212 | 2.869097e-51 | -8.615850e-47 |
| Msa0268560 | Msa1086740 | 0.822930 | 1.819740e-53 | -8.615850e-47 |
| Msa0268570 | Msa1086740 | 0.841167 | 5.599889e-58 | -8.615850e-47 |
| Msa0268580 | Msa1086740 | 0.806084 | 9.765875e-50 | -8.615850e-47 |
| Msa0268630 | Msa1086740 | 0.833638 | 4.753181e-56 | -8.615850e-47 |
| Msa0268660 | Msa1086740 | 0.801664 | 8.091074e-49 | -8.615850e-47 |
| Msa0268670 | Msa1086740 | 0.814256 | 1.690494e-51 | -8.615850e-47 |
| Msa0268740 | Msa1086740 | 0.827023 | 1.966587e-54 | -8.615850e-47 |
| Msa0268750 | Msa1086740 | 0.851671 | 7.623536e-61 | -8.615850e-47 |
| Msa0268830 | Msa1086740 | 0.860772 | 1.636372e-63 | -8.615850e-47 |
| Msa0268840 | Msa1086740 | 0.806230 | 9.099943e-50 | -8.615850e-47 |
| Msa0268860 | Msa1086740 | 0.811862 | 5.661745e-51 | -8.615850e-47 |
| Msa0268880 | Msa1086740 | 0.808655 | 2.783490e-50 | -8.615850e-47 |
| Msa0268950 | Msa1086740 | 0.828926 | 6.852804e-55 | -8.615850e-47 |
| Msa0268960 | Msa1086740 | 0.858244 | 9.411350e-63 | -8.615850e-47 |
| Msa0269040 | Msa1086740 | 0.860172 | 2.486184e-63 | -8.615850e-47 |
| Msa0269050 | Msa1086740 | 0.806969 | 6.354859e-50 | -8.615850e-47 |
| Msa0269070 | Msa1086740 | 0.817328 | 3.491118e-52 | -8.615850e-47 |
| Msa0269130 | Msa1086740 | 0.829557 | 4.815235e-55 | -8.615850e-47 |
| Msa0269140 | Msa1086740 | 0.863526 | 2.337110e-64 | -8.615850e-47 |
| Msa0269150 | Msa1086740 | 0.955897 | 1.047294e-113 | -8.615850e-47 |
| Msa0344180 | Msa1086740 | 0.802585 | 5.233043e-49 | -8.615850e-47 |
| Msa0344190 | Msa1086740 | 0.821855 | 3.234017e-53 | -8.615850e-47 |
| Msa0344310 | Msa1086740 | 0.842211 | 2.969099e-58 | -8.615850e-47 |
| Msa0484040 | Msa1086740 | 0.818875 | 1.559678e-52 | -8.615850e-47 |
| Msa0582510 | Msa1086740 | 0.849724 | 2.690434e-60 | -8.615850e-47 |
| Msa0582540 | Msa1086740 | 0.810588 | 1.069857e-50 | -8.615850e-47 |
| Msa0582640 | Msa1086740 | 0.831283 | 1.822706e-55 | -8.615850e-47 |
| Msa0582650 | Msa1086740 | 0.848182 | 7.213975e-60 | -8.615850e-47 |
| Msa0582690 | Msa1086740 | 0.858269 | 9.251868e-63 | -8.615850e-47 |
| Msa0582730 | Msa1086740 | 0.804787 | 1.826590e-49 | -8.615850e-47 |
| Msa0582760 | Msa1086740 | 0.825122 | 5.566684e-54 | -8.615850e-47 |
| Msa0582770 | Msa1086740 | 0.850421 | 1.716280e-60 | -8.615850e-47 |
| Msa0582810 | Msa1086740 | 0.855795 | 4.963719e-62 | -8.615850e-47 |
| Msa0582840 | Msa1086740 | 0.811783 | 5.890698e-51 | -8.615850e-47 |
| Msa0582910 | Msa1086740 | 0.826596 | 2.487477e-54 | -8.615850e-47 |
| Msa0582920 | Msa1086740 | 0.850672 | 1.459589e-60 | -8.615850e-47 |
| Msa0591270 | Msa1086740 | 0.800695 | 1.277326e-48 | -8.615850e-47 |
| Msa0591290 | Msa1086740 | 0.807136 | 5.856989e-50 | -8.615850e-47 |
| Msa0591310 | Msa1086740 | 0.859511 | 3.933302e-63 | -8.615850e-47 |
| Msa0591350 | Msa1086740 | 0.902952 | 5.721100e-79 | -8.615850e-47 |
| Msa0591360 | Msa1086740 | 0.838684 | 2.484563e-57 | -8.615850e-47 |
| Msa0591380 | Msa1086740 | 0.840450 | 8.633732e-58 | -8.615850e-47 |
| Msa0867680 | Msa1086740 | 0.887983 | 8.834005e-73 | -8.615850e-47 |
| Msa0867690 | Msa1086740 | 0.833794 | 4.344589e-56 | -8.615850e-47 |
| Msa0876520 | Msa1086740 | 0.871826 | 5.082785e-67 | -8.615850e-47 |
| Msa0908220 | Msa1086740 | 0.845428 | 4.085479e-59 | -8.615850e-47 |
| Msa0908230 | Msa1086740 | 0.879538 | 1.148776e-69 | -8.615850e-47 |
| Msa0908240 | Msa1086740 | 0.952755 | 1.219721e-110 | -8.615850e-47 |
| Msa0908310 | Msa1086740 | 0.908574 | 1.473731e-81 | -8.615850e-47 |
| Msa0908320 | Msa1086740 | 0.849071 | 4.091658e-60 | -8.615850e-47 |
| Msa0908370 | Msa1086740 | 0.906368 | 1.599163e-80 | -8.615850e-47 |
| Msa0908380 | Msa1086740 | 0.836685 | 8.096274e-57 | -8.615850e-47 |
| Msa0908430 | Msa1086740 | 0.865366 | 6.222118e-65 | -8.615850e-47 |
| Msa0908440 | Msa1086740 | 0.876312 | 1.543145e-68 | -8.615850e-47 |
| Msa0908450 | Msa1086740 | 0.951177 | 3.533120e-109 | -8.615850e-47 |
| Msa0908480 | Msa1086740 | 0.881953 | 1.562842e-70 | -8.615850e-47 |
| Msa0908530 | Msa1086740 | 0.922114 | 1.496512e-88 | -8.615850e-47 |
| Msa0908540 | Msa1086740 | 0.833994 | 3.873538e-56 | -8.615850e-47 |
| Msa0908590 | Msa1086740 | 0.846657 | 1.892370e-59 | -8.615850e-47 |
| Msa0908600 | Msa1086740 | 0.849011 | 4.250839e-60 | -8.615850e-47 |
| Msa0908610 | Msa1086740 | 0.937108 | 5.911083e-98 | -8.615850e-47 |
| Msa0908650 | Msa1086740 | 0.858007 | 1.107065e-62 | -8.615850e-47 |
| Msa0908660 | Msa1086740 | 0.841117 | 5.769962e-58 | -8.615850e-47 |
| Msa0908670 | Msa1086740 | 0.940099 | 4.161152e-100 | -8.615850e-47 |
| Msa0908720 | Msa1086740 | 0.920394 | 1.352508e-87 | -8.615850e-47 |
| Msa0908730 | Msa1086740 | 0.824578 | 7.482821e-54 | -8.615850e-47 |
| Msa0911190 | Msa1086740 | 0.919068 | 7.137964e-87 | -8.615850e-47 |
| Msa0911200 | Msa1086740 | 0.835677 | 1.459952e-56 | -8.615850e-47 |
| Msa0911230 | Msa1086740 | 0.888531 | 5.438153e-73 | -8.615850e-47 |
| Msa0924830 | Msa1086740 | 0.838985 | 2.077289e-57 | -8.615850e-47 |
| Msa0924870 | Msa1086740 | 0.802233 | 6.183823e-49 | -8.615850e-47 |
| Msa0924880 | Msa1086740 | 0.849029 | 4.202776e-60 | -8.615850e-47 |
| Msa0924920 | Msa1086740 | 0.880229 | 6.521507e-70 | -8.615850e-47 |
| Msa0924930 | Msa1086740 | 0.847401 | 1.183786e-59 | -8.615850e-47 |
| Msa0924940 | Msa1086740 | 0.850859 | 1.293071e-60 | -8.615850e-47 |
| Msa0925100 | Msa1086740 | 0.916104 | 2.659129e-85 | -8.615850e-47 |
| Msa0925110 | Msa1086740 | 0.874785 | 5.147046e-68 | -8.615850e-47 |
| Msa0931070 | Msa1086740 | 0.836852 | 7.339719e-57 | -8.615850e-47 |
| Msa0931110 | Msa1086740 | 0.806198 | 9.240853e-50 | -8.615850e-47 |
| Msa0931130 | Msa1086740 | 0.847699 | 9.802588e-60 | -8.615850e-47 |
| Msa0931220 | Msa1086740 | 0.817300 | 3.542975e-52 | -8.615850e-47 |
| Msa0931230 | Msa1086740 | 0.837046 | 6.548246e-57 | -8.615850e-47 |
| Msa0931260 | Msa1086740 | 0.862525 | 4.765889e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086740 | MtrunA17_Chr7g0234981 | 88.636 | 88 | 10 | 0 | 70 | 157 | 6 | 93 | 2.85e-50 | 156 |
| Msa1086740 | MtrunA17_MTg0491661 | 67.470 | 83 | 27 | 0 | 75 | 157 | 41 | 123 | 8.51e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1086740 | ATCG00905.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa1086740 | ATCG01230.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa1086740 | AT2G07675.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
| Msa1086740 | ATMG00980.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
Find 39 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGCTAAAATAATTTATTT+TGG | 0.180484 | 7_2:+87543596 | None:intergenic |
| CAACAAGGTCGTTCTAAATA+TGG | 0.216871 | 7_2:-87543629 | Msa1086740:CDS |
| CAGAATGTTCTTGTAAATTA+TGG | 0.231614 | 7_2:+87543747 | None:intergenic |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 7_2:-87544591 | Msa1086740:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 7_2:+87543657 | None:intergenic |
| ACTTTACGTAAGGCAGAGTT+TGG | 0.377633 | 7_2:+87543827 | None:intergenic |
| AACAAGGTCGTTCTAAATAT+GGG | 0.408379 | 7_2:-87543628 | Msa1086740:CDS |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 7_2:+87543630 | None:intergenic |
| TTGTAAATTATGGCCAATAC+CGG | 0.438557 | 7_2:+87543757 | None:intergenic |
| CATTCTGTAGTCTTAGTAAG+AGG | 0.441296 | 7_2:-87543731 | Msa1086740:CDS |
| TATCACTACAACAAGCATAA+TGG | 0.443035 | 7_2:-87544797 | Msa1086740:intron |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | 7_2:+87544923 | None:intergenic |
| GCCAGAGTACGCTTAACCTC+TGG | 0.485872 | 7_2:-87543803 | Msa1086740:CDS |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 7_2:+87544599 | None:intergenic |
| ACTGCTTATATACCCGGTAT+TGG | 0.491318 | 7_2:-87543770 | Msa1086740:CDS |
| GATCGTTGGCACAAGAAAGA+AGG | 0.502174 | 7_2:+87544949 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 7_2:+87543658 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 7_2:-87543657 | Msa1086740:CDS |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | 7_2:+87544935 | None:intergenic |
| AAATGGATAAATCAGAACTA+AGG | 0.516319 | 7_2:-87544991 | Msa1086740:CDS |
| AGAACTAAGGCAAGATGAGA+TGG | 0.530899 | 7_2:-87544978 | Msa1086740:CDS |
| TACTCTGGCAACTTTACGTA+AGG | 0.546111 | 7_2:+87543817 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 7_2:-87543730 | Msa1086740:CDS |
| GGTTCTGTAGAGTGGCAGTA+AGG | 0.572203 | 7_2:-87543891 | Msa1086740:intron |
| TCCAGAGGTTAAGCGTACTC+TGG | 0.572579 | 7_2:+87543802 | None:intergenic |
| GAAATCACTGCTTATATACC+CGG | 0.578898 | 7_2:-87543776 | Msa1086740:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 7_2:-87543683 | Msa1086740:CDS |
| ATCGTTGGCACAAGAAAGAA+GGG | 0.587101 | 7_2:+87544950 | None:intergenic |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 7_2:-87544583 | Msa1086740:intron |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 7_2:-87543729 | Msa1086740:CDS |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 7_2:-87543644 | Msa1086740:CDS |
| TGTAAATTATGGCCAATACC+GGG | 0.601960 | 7_2:+87543758 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 7_2:-87543665 | Msa1086740:CDS |
| AGCAGTGATTTCAAATCCAG+AGG | 0.620729 | 7_2:+87543787 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 7_2:+87544609 | None:intergenic |
| ACAAGGTCGTTCTAAATATG+GGG | 0.627597 | 7_2:-87543627 | Msa1086740:CDS |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 7_2:-87543707 | Msa1086740:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 7_2:-87543728 | Msa1086740:CDS |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 7_2:+87543689 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr7_2:87543754-87543773 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr7_2:87543755-87543774 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr7_2:87543758-87543777 | Msa1086740:CDS | 10.0% |
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr7_2:87543754-87543773 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr7_2:87543755-87543774 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr7_2:87543758-87543777 | Msa1086740:CDS | 10.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr7_2:87544194-87544213 | Msa1086740:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr7_2:87544194-87544213 | Msa1086740:intron | 15.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr7_2:87543936-87543955 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr7_2:87544555-87544574 | Msa1086740:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr7_2:87544600-87544619 | Msa1086740:CDS | 20.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr7_2:87543936-87543955 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr7_2:87544555-87544574 | Msa1086740:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr7_2:87544600-87544619 | Msa1086740:CDS | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr7_2:87543713-87543732 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr7_2:87543714-87543733 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr7_2:87543834-87543853 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr7_2:87543835-87543854 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr7_2:87543836-87543855 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr7_2:87543937-87543956 | Msa1086740:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr7_2:87543942-87543961 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr7_2:87544079-87544098 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr7_2:87544302-87544321 | Msa1086740:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr7_2:87544378-87544397 | Msa1086740:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr7_2:87544379-87544398 | Msa1086740:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr7_2:87544446-87544465 | Msa1086740:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr7_2:87544456-87544475 | Msa1086740:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr7_2:87544519-87544538 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr7_2:87544601-87544620 | Msa1086740:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr7_2:87544655-87544674 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr7_2:87544855-87544874 | None:intergenic | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr7_2:87543713-87543732 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr7_2:87543714-87543733 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr7_2:87543834-87543853 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr7_2:87543835-87543854 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr7_2:87543836-87543855 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr7_2:87543937-87543956 | Msa1086740:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr7_2:87543942-87543961 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr7_2:87544079-87544098 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr7_2:87544302-87544321 | Msa1086740:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr7_2:87544378-87544397 | Msa1086740:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr7_2:87544379-87544398 | Msa1086740:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr7_2:87544446-87544465 | Msa1086740:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr7_2:87544456-87544475 | Msa1086740:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr7_2:87544519-87544538 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr7_2:87544601-87544620 | Msa1086740:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr7_2:87544655-87544674 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr7_2:87544855-87544874 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr7_2:87543708-87543727 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr7_2:87543748-87543767 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr7_2:87543802-87543821 | Msa1086740:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr7_2:87543879-87543898 | Msa1086740:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr7_2:87544435-87544454 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr7_2:87544436-87544455 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr7_2:87544434-87544453 | Msa1086740:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr7_2:87544451-87544470 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr7_2:87544449-87544468 | Msa1086740:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr7_2:87544455-87544474 | Msa1086740:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr7_2:87544845-87544864 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr7_2:87544869-87544888 | Msa1086740:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr7_2:87544971-87544990 | Msa1086740:CDS | 30.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr7_2:87543708-87543727 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr7_2:87543748-87543767 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr7_2:87543802-87543821 | Msa1086740:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr7_2:87543879-87543898 | Msa1086740:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr7_2:87544435-87544454 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr7_2:87544436-87544455 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr7_2:87544434-87544453 | Msa1086740:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr7_2:87544451-87544470 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr7_2:87544449-87544468 | Msa1086740:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr7_2:87544455-87544474 | Msa1086740:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr7_2:87544845-87544864 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr7_2:87544869-87544888 | Msa1086740:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr7_2:87544971-87544990 | Msa1086740:CDS | 30.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr7_2:87543747-87543766 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr7_2:87543866-87543885 | Msa1086740:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr7_2:87543872-87543891 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr7_2:87543970-87543989 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr7_2:87544233-87544252 | Msa1086740:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr7_2:87544261-87544280 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr7_2:87544433-87544452 | Msa1086740:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr7_2:87544657-87544676 | Msa1086740:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr7_2:87544685-87544704 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr7_2:87544687-87544706 | Msa1086740:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr7_2:87544755-87544774 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr7_2:87544765-87544784 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr7_2:87544766-87544785 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr7_2:87544823-87544842 | Msa1086740:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr7_2:87544844-87544863 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr7_2:87544868-87544887 | Msa1086740:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr7_2:87544870-87544889 | Msa1086740:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr7_2:87544972-87544991 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr7_2:87544970-87544989 | Msa1086740:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr7_2:87544972-87544991 | Msa1086740:CDS | 35.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr7_2:87543747-87543766 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr7_2:87543866-87543885 | Msa1086740:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr7_2:87543872-87543891 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr7_2:87543970-87543989 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr7_2:87544233-87544252 | Msa1086740:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr7_2:87544261-87544280 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr7_2:87544433-87544452 | Msa1086740:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr7_2:87544657-87544676 | Msa1086740:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr7_2:87544685-87544704 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr7_2:87544687-87544706 | Msa1086740:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr7_2:87544755-87544774 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr7_2:87544765-87544784 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr7_2:87544766-87544785 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr7_2:87544823-87544842 | Msa1086740:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr7_2:87544844-87544863 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr7_2:87544868-87544887 | Msa1086740:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr7_2:87544870-87544889 | Msa1086740:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr7_2:87544972-87544991 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr7_2:87544970-87544989 | Msa1086740:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr7_2:87544972-87544991 | Msa1086740:CDS | 35.0% |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr7_2:87543621-87543640 | Msa1086740:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr7_2:87543652-87543671 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr7_2:87543667-87543686 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr7_2:87543672-87543691 | Msa1086740:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr7_2:87543679-87543698 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr7_2:87543746-87543765 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr7_2:87543865-87543884 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr7_2:87543919-87543938 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr7_2:87543923-87543942 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr7_2:87544044-87544063 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr7_2:87544043-87544062 | Msa1086740:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr7_2:87544391-87544410 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr7_2:87544412-87544431 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr7_2:87544605-87544624 | Msa1086740:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr7_2:87544764-87544783 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr7_2:87544775-87544794 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr7_2:87544785-87544804 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr7_2:87544815-87544834 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr7_2:87544829-87544848 | Msa1086740:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr7_2:87544871-87544890 | Msa1086740:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr7_2:87544913-87544932 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr7_2:87544916-87544935 | Msa1086740:intron | 40.0% | |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr7_2:87543621-87543640 | Msa1086740:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr7_2:87543652-87543671 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr7_2:87543667-87543686 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr7_2:87543672-87543691 | Msa1086740:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr7_2:87543679-87543698 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr7_2:87543746-87543765 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr7_2:87543865-87543884 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr7_2:87543919-87543938 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr7_2:87543923-87543942 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr7_2:87544044-87544063 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr7_2:87544043-87544062 | Msa1086740:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr7_2:87544391-87544410 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr7_2:87544412-87544431 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr7_2:87544605-87544624 | Msa1086740:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr7_2:87544764-87544783 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr7_2:87544775-87544794 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr7_2:87544785-87544804 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr7_2:87544815-87544834 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr7_2:87544829-87544848 | Msa1086740:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr7_2:87544871-87544890 | Msa1086740:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr7_2:87544913-87544932 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr7_2:87544916-87544935 | Msa1086740:intron | 40.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr7_2:87543653-87543672 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr7_2:87543745-87543764 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr7_2:87543957-87543976 | Msa1086740:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr7_2:87543961-87543980 | Msa1086740:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr7_2:87543967-87543986 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr7_2:87544015-87544034 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr7_2:87544016-87544035 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr7_2:87544017-87544036 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr7_2:87544016-87544035 | Msa1086740:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr7_2:87544362-87544381 | Msa1086740:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr7_2:87544466-87544485 | Msa1086740:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr7_2:87544610-87544629 | Msa1086740:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr7_2:87544627-87544646 | Msa1086740:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr7_2:87544700-87544719 | Msa1086740:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr7_2:87544875-87544894 | Msa1086740:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr7_2:87544876-87544895 | Msa1086740:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr7_2:87544892-87544911 | Msa1086740:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr7_2:87544944-87544963 | None:intergenic | 45.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr7_2:87543653-87543672 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr7_2:87543745-87543764 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr7_2:87543957-87543976 | Msa1086740:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr7_2:87543961-87543980 | Msa1086740:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr7_2:87543967-87543986 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr7_2:87544015-87544034 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr7_2:87544016-87544035 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr7_2:87544017-87544036 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr7_2:87544016-87544035 | Msa1086740:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr7_2:87544362-87544381 | Msa1086740:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr7_2:87544466-87544485 | Msa1086740:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr7_2:87544610-87544629 | Msa1086740:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr7_2:87544627-87544646 | Msa1086740:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr7_2:87544700-87544719 | Msa1086740:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr7_2:87544875-87544894 | Msa1086740:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr7_2:87544876-87544895 | Msa1086740:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr7_2:87544892-87544911 | Msa1086740:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr7_2:87544944-87544963 | None:intergenic | 45.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr7_2:87543744-87543763 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr7_2:87544394-87544413 | Msa1086740:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr7_2:87544669-87544688 | Msa1086740:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr7_2:87544708-87544727 | Msa1086740:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr7_2:87544800-87544819 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr7_2:87544882-87544901 | Msa1086740:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr7_2:87544945-87544964 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr7_2:87544942-87544961 | Msa1086740:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr7_2:87544955-87544974 | Msa1086740:CDS | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr7_2:87543744-87543763 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr7_2:87544394-87544413 | Msa1086740:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr7_2:87544669-87544688 | Msa1086740:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr7_2:87544708-87544727 | Msa1086740:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr7_2:87544800-87544819 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr7_2:87544882-87544901 | Msa1086740:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr7_2:87544945-87544964 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr7_2:87544942-87544961 | Msa1086740:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr7_2:87544955-87544974 | Msa1086740:CDS | 50.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr7_2:87543742-87543761 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr7_2:87543743-87543762 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr7_2:87544344-87544363 | Msa1086740:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr7_2:87544345-87544364 | Msa1086740:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr7_2:87544353-87544372 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr7_2:87544796-87544815 | Msa1086740:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr7_2:87544934-87544953 | Msa1086740:intron | 55.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr7_2:87543742-87543761 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr7_2:87543743-87543762 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr7_2:87544344-87544363 | Msa1086740:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr7_2:87544345-87544364 | Msa1086740:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr7_2:87544353-87544372 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr7_2:87544796-87544815 | Msa1086740:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr7_2:87544934-87544953 | Msa1086740:intron | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr7_2:87543993-87544012 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr7_2:87544010-87544029 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr7_2:87544008-87544027 | Msa1086740:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr7_2:87544349-87544368 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr7_2:87544346-87544365 | Msa1086740:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr7_2:87544350-87544369 | None:intergenic | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr7_2:87543993-87544012 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr7_2:87544010-87544029 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr7_2:87544008-87544027 | Msa1086740:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr7_2:87544349-87544368 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr7_2:87544346-87544365 | Msa1086740:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr7_2:87544350-87544369 | None:intergenic | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr7_2:87544003-87544022 | None:intergenic | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr7_2:87544003-87544022 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 87543610 | 87545011 | 87543610 | ID=Msa1086740;Name=Msa1086740 |
| chr7_2 | mRNA | 87543610 | 87545011 | 87543610 | ID=Msa1086740-mRNA-1;Parent=Msa1086740;Name=Msa1086740-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|157 |
| chr7_2 | exon | 87544935 | 87545011 | 87544935 | ID=Msa1086740-mRNA-1:exon:23865;Parent=Msa1086740-mRNA-1 |
| chr7_2 | exon | 87544798 | 87544841 | 87544798 | ID=Msa1086740-mRNA-1:exon:23864;Parent=Msa1086740-mRNA-1 |
| chr7_2 | exon | 87544584 | 87544642 | 87544584 | ID=Msa1086740-mRNA-1:exon:23863;Parent=Msa1086740-mRNA-1 |
| chr7_2 | exon | 87543610 | 87543903 | 87543610 | ID=Msa1086740-mRNA-1:exon:23862;Parent=Msa1086740-mRNA-1 |
| chr7_2 | CDS | 87544935 | 87545011 | 87544935 | ID=Msa1086740-mRNA-1:cds;Parent=Msa1086740-mRNA-1 |
| chr7_2 | CDS | 87544798 | 87544841 | 87544798 | ID=Msa1086740-mRNA-1:cds;Parent=Msa1086740-mRNA-1 |
| chr7_2 | CDS | 87544584 | 87544642 | 87544584 | ID=Msa1086740-mRNA-1:cds;Parent=Msa1086740-mRNA-1 |
| chr7_2 | CDS | 87543610 | 87543903 | 87543610 | ID=Msa1086740-mRNA-1:cds;Parent=Msa1086740-mRNA-1 |
| Gene Sequence |
| Protein sequence |
