Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087050 | AES69829.1 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 2.67e-75 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087050 | sp|A4GYN8|RR12B_POPTR | 95.876 | 97 | 4 | 0 | 61 | 157 | 39 | 135 | 3.89e-61 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087050 | G7J101 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 1.28e-75 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0126750 | Msa1087050 | 0.805943 | 1.045613e-49 | -8.615850e-47 |
| Msa0202640 | Msa1087050 | 0.845741 | 3.360829e-59 | -8.615850e-47 |
| Msa0405420 | Msa1087050 | 0.866761 | 2.251374e-65 | -8.615850e-47 |
| Msa0405430 | Msa1087050 | 0.846225 | 2.483289e-59 | -8.615850e-47 |
| Msa0405440 | Msa1087050 | 0.921720 | 2.491090e-88 | -8.615850e-47 |
| Msa0405510 | Msa1087050 | 0.861516 | 9.712107e-64 | -8.615850e-47 |
| Msa0405520 | Msa1087050 | 0.829614 | 4.663765e-55 | -8.615850e-47 |
| Msa0405530 | Msa1087050 | 0.926967 | 2.259659e-91 | -8.615850e-47 |
| Msa0983630 | Msa1087050 | 0.873181 | 1.793677e-67 | -8.615850e-47 |
| Msa0983640 | Msa1087050 | 0.841037 | 6.059129e-58 | -8.615850e-47 |
| Msa1022050 | Msa1087050 | 0.897768 | 1.020583e-76 | -8.615850e-47 |
| Msa1022060 | Msa1087050 | 0.847803 | 9.179675e-60 | -8.615850e-47 |
| Msa1064410 | Msa1087050 | 0.851377 | 9.236728e-61 | -8.615850e-47 |
| Msa1086090 | Msa1087050 | 0.832882 | 7.336365e-56 | -8.615850e-47 |
| Msa1086140 | Msa1087050 | 0.834128 | 3.583872e-56 | -8.615850e-47 |
| Msa1086190 | Msa1087050 | 0.803129 | 4.038992e-49 | -8.615850e-47 |
| Msa1086200 | Msa1087050 | 0.847875 | 8.766113e-60 | -8.615850e-47 |
| Msa1086270 | Msa1087050 | 0.814887 | 1.225557e-51 | -8.615850e-47 |
| Msa1086550 | Msa1087050 | 0.830855 | 2.320849e-55 | -8.615850e-47 |
| Msa1086590 | Msa1087050 | 0.827818 | 1.268137e-54 | -8.615850e-47 |
| Msa1086600 | Msa1087050 | 0.851506 | 8.488910e-61 | -8.615850e-47 |
| Msa1086720 | Msa1087050 | 0.858992 | 5.629407e-63 | -8.615850e-47 |
| Msa1086730 | Msa1087050 | 0.873554 | 1.343857e-67 | -8.615850e-47 |
| Msa1086740 | Msa1087050 | 0.958553 | 1.773577e-116 | -8.615850e-47 |
| Msa1086790 | Msa1087050 | 0.915311 | 6.840950e-85 | -8.615850e-47 |
| Msa1086800 | Msa1087050 | 0.853560 | 2.204869e-61 | -8.615850e-47 |
| Msa1086890 | Msa1087050 | 0.801695 | 7.973590e-49 | -8.615850e-47 |
| Msa1086900 | Msa1087050 | 0.829855 | 4.075355e-55 | -8.615850e-47 |
| Msa1086960 | Msa1087050 | 0.929537 | 6.030446e-93 | -8.615850e-47 |
| Msa1086970 | Msa1087050 | 0.828359 | 9.392985e-55 | -8.615850e-47 |
| Msa1087030 | Msa1087050 | 0.849604 | 2.905820e-60 | -8.615850e-47 |
| Msa1087040 | Msa1087050 | 0.855629 | 5.548261e-62 | -8.615850e-47 |
| Msa1087050 | Msa1087110 | 0.921354 | 3.982970e-88 | -8.615850e-47 |
| Msa1087050 | Msa1087120 | 0.826805 | 2.216948e-54 | -8.615850e-47 |
| Msa1087050 | Msa1143120 | 0.830272 | 3.224424e-55 | -8.615850e-47 |
| Msa1087050 | Msa1143170 | 0.829100 | 6.218298e-55 | -8.615850e-47 |
| Msa1087050 | Msa1305090 | 0.820568 | 6.404846e-53 | -8.615850e-47 |
| Msa1087050 | Msa1354420 | 0.915480 | 5.601432e-85 | -8.615850e-47 |
| Msa1087050 | Msa1354430 | 0.842974 | 1.862705e-58 | -8.615850e-47 |
| Msa1087050 | Msa1354480 | 0.851709 | 7.437034e-61 | -8.615850e-47 |
| Msa1087050 | Msa1354490 | 0.863826 | 1.886940e-64 | -8.615850e-47 |
| Msa1087050 | Msa1354500 | 0.946984 | 1.621146e-105 | -8.615850e-47 |
| Msa1087050 | Msa1354550 | 0.914424 | 1.947856e-84 | -8.615850e-47 |
| Msa1087050 | Msa1354560 | 0.833405 | 5.436472e-56 | -8.615850e-47 |
| Msa1087050 | Msa1354610 | 0.867184 | 1.650080e-65 | -8.615850e-47 |
| Msa1087050 | Msa1354620 | 0.853419 | 2.420126e-61 | -8.615850e-47 |
| Msa1087050 | Msa1354630 | 0.948574 | 7.195832e-107 | -8.615850e-47 |
| Msa1087050 | Msa1354680 | 0.921705 | 2.539156e-88 | -8.615850e-47 |
| Msa1087050 | Msa1354690 | 0.877619 | 5.433135e-69 | -8.615850e-47 |
| Msa1087050 | Msa1354700 | 0.833732 | 4.503049e-56 | -8.615850e-47 |
| Msa1087050 | Msa1354740 | 0.862371 | 5.312649e-64 | -8.615850e-47 |
| Msa1087050 | Msa1354750 | 0.858403 | 8.439120e-63 | -8.615850e-47 |
| Msa1087050 | Msa1354760 | 0.949277 | 1.760230e-107 | -8.615850e-47 |
| Msa1087050 | Msa1354810 | 0.904809 | 8.324369e-80 | -8.615850e-47 |
| Msa1087050 | Msa1354820 | 0.857990 | 1.120053e-62 | -8.615850e-47 |
| Msa1087050 | Msa1354920 | 0.830486 | 2.858332e-55 | -8.615850e-47 |
| Msa1087050 | Msa1354980 | 0.927308 | 1.407415e-91 | -8.615850e-47 |
| Msa1087050 | Msa1354990 | 0.853784 | 1.900750e-61 | -8.615850e-47 |
| Msa1087050 | Msa1355080 | 0.823842 | 1.113909e-53 | -8.615850e-47 |
| Msa1087050 | Msa1355090 | 0.831470 | 1.639393e-55 | -8.615850e-47 |
| Msa1087050 | Msa1365890 | 0.889645 | 2.011705e-73 | -8.615850e-47 |
| Msa1087050 | Msa1365900 | 0.838126 | 3.459772e-57 | -8.615850e-47 |
| Msa1087050 | Msa1365950 | 0.854313 | 1.337770e-61 | -8.615850e-47 |
| Msa1087050 | Msa1365960 | 0.832357 | 9.899283e-56 | -8.615850e-47 |
| Msa1087050 | Msa1365970 | 0.946613 | 3.303883e-105 | -8.615850e-47 |
| Msa1087050 | Msa1366080 | 0.899202 | 2.503410e-77 | -8.615850e-47 |
| Msa1087050 | Msa1366090 | 0.843603 | 1.265894e-58 | -8.615850e-47 |
| Msa1087050 | Msa1368230 | 0.860867 | 1.531402e-63 | -8.615850e-47 |
| Msa1087050 | Msa1368240 | 0.935963 | 3.699836e-97 | -8.615850e-47 |
| Msa1087050 | Msa1380610 | 0.812527 | 4.053373e-51 | -8.615850e-47 |
| Msa1087050 | Msa1385410 | 0.872861 | 2.295793e-67 | -8.615850e-47 |
| Msa1087050 | Msa1385420 | 0.828315 | 9.625569e-55 | -8.615850e-47 |
| Msa1087050 | Msa1391090 | 0.835768 | 1.384636e-56 | -8.615850e-47 |
| Msa1087050 | Msa1391100 | 0.859046 | 5.421659e-63 | -8.615850e-47 |
| Msa1087050 | Msa1391110 | 0.938019 | 1.340633e-98 | -8.615850e-47 |
| Msa1087050 | Msa1391160 | 0.868791 | 5.021270e-66 | -8.615850e-47 |
| Msa1087050 | Msa1391170 | 0.848407 | 6.252697e-60 | -8.615850e-47 |
| Msa1087050 | Msa1391220 | 0.839463 | 1.561137e-57 | -8.615850e-47 |
| Msa1087050 | Msa1391230 | 0.858196 | 9.726142e-63 | -8.615850e-47 |
| Msa1087050 | Msa1391240 | 0.934410 | 4.218266e-96 | -8.615850e-47 |
| Msa1087050 | Msa1394030 | 0.841465 | 4.675702e-58 | -8.615850e-47 |
| Msa1087050 | Msa1394040 | 0.822088 | 2.856260e-53 | -8.615850e-47 |
| Msa1087050 | Msa1394150 | 0.808685 | 2.743053e-50 | -8.615850e-47 |
| Msa1087050 | Msa1394160 | 0.831133 | 1.983954e-55 | -8.615850e-47 |
| Msa1087050 | Msa1394210 | 0.823086 | 1.673309e-53 | -8.615850e-47 |
| Msa1087050 | Msa1460120 | 0.847550 | 1.077575e-59 | -8.615850e-47 |
| Msa1087050 | Msa1460130 | 0.860368 | 2.169040e-63 | -8.615850e-47 |
| Msa0263770 | Msa1087050 | 0.867034 | 1.842023e-65 | -8.615850e-47 |
| Msa0268210 | Msa1087050 | 0.806236 | 9.073807e-50 | -8.615850e-47 |
| Msa0268250 | Msa1087050 | 0.834517 | 2.863969e-56 | -8.615850e-47 |
| Msa0268260 | Msa1087050 | 0.832810 | 7.643300e-56 | -8.615850e-47 |
| Msa0268270 | Msa1087050 | 0.925030 | 3.183557e-90 | -8.615850e-47 |
| Msa0268300 | Msa1087050 | 0.878811 | 2.075296e-69 | -8.615850e-47 |
| Msa0268310 | Msa1087050 | 0.837734 | 4.365324e-57 | -8.615850e-47 |
| Msa0268430 | Msa1087050 | 0.808189 | 3.499885e-50 | -8.615850e-47 |
| Msa0268450 | Msa1087050 | 0.806947 | 6.421246e-50 | -8.615850e-47 |
| Msa0268570 | Msa1087050 | 0.829076 | 6.300399e-55 | -8.615850e-47 |
| Msa0268630 | Msa1087050 | 0.815167 | 1.061989e-51 | -8.615850e-47 |
| Msa0268670 | Msa1087050 | 0.800282 | 1.550750e-48 | -8.615850e-47 |
| Msa0268740 | Msa1087050 | 0.811654 | 6.284594e-51 | -8.615850e-47 |
| Msa0268750 | Msa1087050 | 0.835152 | 1.981746e-56 | -8.615850e-47 |
| Msa0268830 | Msa1087050 | 0.839155 | 1.876308e-57 | -8.615850e-47 |
| Msa0268860 | Msa1087050 | 0.800818 | 1.205491e-48 | -8.615850e-47 |
| Msa0268950 | Msa1087050 | 0.805996 | 1.019406e-49 | -8.615850e-47 |
| Msa0268960 | Msa1087050 | 0.833537 | 5.037234e-56 | -8.615850e-47 |
| Msa0269040 | Msa1087050 | 0.837445 | 5.176112e-57 | -8.615850e-47 |
| Msa0269070 | Msa1087050 | 0.808862 | 2.514426e-50 | -8.615850e-47 |
| Msa0269130 | Msa1087050 | 0.819111 | 1.378383e-52 | -8.615850e-47 |
| Msa0269140 | Msa1087050 | 0.856864 | 2.411407e-62 | -8.615850e-47 |
| Msa0269150 | Msa1087050 | 0.953641 | 1.753225e-111 | -8.615850e-47 |
| Msa0344190 | Msa1087050 | 0.801795 | 7.606043e-49 | -8.615850e-47 |
| Msa0344310 | Msa1087050 | 0.814745 | 1.317161e-51 | -8.615850e-47 |
| Msa0484040 | Msa1087050 | 0.803530 | 3.336677e-49 | -8.615850e-47 |
| Msa0582510 | Msa1087050 | 0.831490 | 1.620463e-55 | -8.615850e-47 |
| Msa0582640 | Msa1087050 | 0.804539 | 2.058040e-49 | -8.615850e-47 |
| Msa0582650 | Msa1087050 | 0.834069 | 3.708076e-56 | -8.615850e-47 |
| Msa0582690 | Msa1087050 | 0.838663 | 2.515250e-57 | -8.615850e-47 |
| Msa0582730 | Msa1087050 | 0.802443 | 5.596651e-49 | -8.615850e-47 |
| Msa0582760 | Msa1087050 | 0.811095 | 8.307726e-51 | -8.615850e-47 |
| Msa0582770 | Msa1087050 | 0.831316 | 1.788210e-55 | -8.615850e-47 |
| Msa0582810 | Msa1087050 | 0.840320 | 9.333331e-58 | -8.615850e-47 |
| Msa0582840 | Msa1087050 | 0.804850 | 1.771962e-49 | -8.615850e-47 |
| Msa0582910 | Msa1087050 | 0.811201 | 7.881298e-51 | -8.615850e-47 |
| Msa0582920 | Msa1087050 | 0.840849 | 6.785738e-58 | -8.615850e-47 |
| Msa0591270 | Msa1087050 | 0.811922 | 5.493997e-51 | -8.615850e-47 |
| Msa0591290 | Msa1087050 | 0.804646 | 1.954465e-49 | -8.615850e-47 |
| Msa0591310 | Msa1087050 | 0.863323 | 2.702024e-64 | -8.615850e-47 |
| Msa0591350 | Msa1087050 | 0.883781 | 3.355866e-71 | -8.615850e-47 |
| Msa0591360 | Msa1087050 | 0.838688 | 2.479123e-57 | -8.615850e-47 |
| Msa0591380 | Msa1087050 | 0.823825 | 1.124138e-53 | -8.615850e-47 |
| Msa0867680 | Msa1087050 | 0.881331 | 2.623835e-70 | -8.615850e-47 |
| Msa0867690 | Msa1087050 | 0.841627 | 4.236201e-58 | -8.615850e-47 |
| Msa0876520 | Msa1087050 | 0.849446 | 3.217544e-60 | -8.615850e-47 |
| Msa0908220 | Msa1087050 | 0.838180 | 3.351011e-57 | -8.615850e-47 |
| Msa0908230 | Msa1087050 | 0.878882 | 1.958818e-69 | -8.615850e-47 |
| Msa0908240 | Msa1087050 | 0.939843 | 6.415487e-100 | -8.615850e-47 |
| Msa0908310 | Msa1087050 | 0.900089 | 1.037938e-77 | -8.615850e-47 |
| Msa0908320 | Msa1087050 | 0.846878 | 1.646778e-59 | -8.615850e-47 |
| Msa0908370 | Msa1087050 | 0.896241 | 4.455396e-76 | -8.615850e-47 |
| Msa0908380 | Msa1087050 | 0.825511 | 4.503335e-54 | -8.615850e-47 |
| Msa0908430 | Msa1087050 | 0.859518 | 3.913923e-63 | -8.615850e-47 |
| Msa0908440 | Msa1087050 | 0.887885 | 9.627037e-73 | -8.615850e-47 |
| Msa0908450 | Msa1087050 | 0.950654 | 1.052966e-108 | -8.615850e-47 |
| Msa0908480 | Msa1087050 | 0.863578 | 2.252682e-64 | -8.615850e-47 |
| Msa0908530 | Msa1087050 | 0.916128 | 2.584237e-85 | -8.615850e-47 |
| Msa0908540 | Msa1087050 | 0.848661 | 5.315757e-60 | -8.615850e-47 |
| Msa0908590 | Msa1087050 | 0.849121 | 3.962519e-60 | -8.615850e-47 |
| Msa0908600 | Msa1087050 | 0.845148 | 4.866684e-59 | -8.615850e-47 |
| Msa0908610 | Msa1087050 | 0.922044 | 1.638409e-88 | -8.615850e-47 |
| Msa0908650 | Msa1087050 | 0.853329 | 2.568268e-61 | -8.615850e-47 |
| Msa0908660 | Msa1087050 | 0.834038 | 3.775854e-56 | -8.615850e-47 |
| Msa0908670 | Msa1087050 | 0.933092 | 3.177115e-95 | -8.615850e-47 |
| Msa0908720 | Msa1087050 | 0.907911 | 3.037059e-81 | -8.615850e-47 |
| Msa0908730 | Msa1087050 | 0.839879 | 1.216663e-57 | -8.615850e-47 |
| Msa0911190 | Msa1087050 | 0.898771 | 3.826538e-77 | -8.615850e-47 |
| Msa0911200 | Msa1087050 | 0.847543 | 1.082280e-59 | -8.615850e-47 |
| Msa0911230 | Msa1087050 | 0.864597 | 1.084747e-64 | -8.615850e-47 |
| Msa0924830 | Msa1087050 | 0.833311 | 5.735096e-56 | -8.615850e-47 |
| Msa0924880 | Msa1087050 | 0.844841 | 5.890083e-59 | -8.615850e-47 |
| Msa0924920 | Msa1087050 | 0.871830 | 5.068538e-67 | -8.615850e-47 |
| Msa0924930 | Msa1087050 | 0.850040 | 2.196110e-60 | -8.615850e-47 |
| Msa0924940 | Msa1087050 | 0.855818 | 4.886615e-62 | -8.615850e-47 |
| Msa0925100 | Msa1087050 | 0.909803 | 3.799137e-82 | -8.615850e-47 |
| Msa0925110 | Msa1087050 | 0.875814 | 2.289834e-68 | -8.615850e-47 |
| Msa0931070 | Msa1087050 | 0.822399 | 2.418373e-53 | -8.615850e-47 |
| Msa0931130 | Msa1087050 | 0.830563 | 2.736362e-55 | -8.615850e-47 |
| Msa0931220 | Msa1087050 | 0.802272 | 6.069448e-49 | -8.615850e-47 |
| Msa0931230 | Msa1087050 | 0.831323 | 1.781510e-55 | -8.615850e-47 |
| Msa0931260 | Msa1087050 | 0.840916 | 6.518975e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087050 | MtrunA17_Chr7g0234981 | 88.636 | 88 | 10 | 0 | 70 | 157 | 6 | 93 | 2.85e-50 | 156 |
| Msa1087050 | MtrunA17_MTg0491661 | 67.470 | 83 | 27 | 0 | 75 | 157 | 41 | 123 | 8.51e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1087050 | ATCG00905.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa1087050 | ATCG01230.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa1087050 | AT2G07675.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
| Msa1087050 | ATMG00980.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
Find 39 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGCTAAAATAATTTATTT+TGG | 0.180484 | 7_2:+87691942 | None:intergenic |
| CAACAAGGTCGTTCTAAATA+TGG | 0.216871 | 7_2:-87691975 | Msa1087050:CDS |
| CAGAATGTTCTTGTAAATTA+TGG | 0.231614 | 7_2:+87692093 | None:intergenic |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 7_2:-87692937 | Msa1087050:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 7_2:+87692003 | None:intergenic |
| ACTTTACGTAAGGCAGAGTT+TGG | 0.377633 | 7_2:+87692173 | None:intergenic |
| AACAAGGTCGTTCTAAATAT+GGG | 0.408379 | 7_2:-87691974 | Msa1087050:CDS |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 7_2:+87691976 | None:intergenic |
| TTGTAAATTATGGCCAATAC+CGG | 0.438557 | 7_2:+87692103 | None:intergenic |
| CATTCTGTAGTCTTAGTAAG+AGG | 0.441296 | 7_2:-87692077 | Msa1087050:CDS |
| TATCACTACAACAAGCATAA+TGG | 0.443035 | 7_2:-87693143 | Msa1087050:intron |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | 7_2:+87693269 | None:intergenic |
| GCCAGAGTACGCTTAACCTC+TGG | 0.485872 | 7_2:-87692149 | Msa1087050:CDS |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 7_2:+87692945 | None:intergenic |
| ACTGCTTATATACCCGGTAT+TGG | 0.491318 | 7_2:-87692116 | Msa1087050:CDS |
| GATCGTTGGCACAAGAAAGA+AGG | 0.502174 | 7_2:+87693295 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 7_2:+87692004 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 7_2:-87692003 | Msa1087050:CDS |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | 7_2:+87693281 | None:intergenic |
| AAATGGATAAATCAGAACTA+AGG | 0.516319 | 7_2:-87693337 | Msa1087050:CDS |
| AGAACTAAGGCAAGATGAGA+TGG | 0.530899 | 7_2:-87693324 | Msa1087050:CDS |
| TACTCTGGCAACTTTACGTA+AGG | 0.546111 | 7_2:+87692163 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 7_2:-87692076 | Msa1087050:CDS |
| GGTTCTGTAGAGTGGCAGTA+AGG | 0.572203 | 7_2:-87692237 | Msa1087050:intron |
| TCCAGAGGTTAAGCGTACTC+TGG | 0.572579 | 7_2:+87692148 | None:intergenic |
| GAAATCACTGCTTATATACC+CGG | 0.578898 | 7_2:-87692122 | Msa1087050:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 7_2:-87692029 | Msa1087050:CDS |
| ATCGTTGGCACAAGAAAGAA+GGG | 0.587101 | 7_2:+87693296 | None:intergenic |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 7_2:-87692929 | Msa1087050:intron |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 7_2:-87692075 | Msa1087050:CDS |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 7_2:-87691990 | Msa1087050:CDS |
| TGTAAATTATGGCCAATACC+GGG | 0.601960 | 7_2:+87692104 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 7_2:-87692011 | Msa1087050:CDS |
| AGCAGTGATTTCAAATCCAG+AGG | 0.620729 | 7_2:+87692133 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 7_2:+87692955 | None:intergenic |
| ACAAGGTCGTTCTAAATATG+GGG | 0.627597 | 7_2:-87691973 | Msa1087050:CDS |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 7_2:-87692053 | Msa1087050:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 7_2:-87692074 | Msa1087050:CDS |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 7_2:+87692035 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr7_2:87692100-87692119 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr7_2:87692101-87692120 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr7_2:87692104-87692123 | Msa1087050:CDS | 10.0% |
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr7_2:87692100-87692119 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr7_2:87692101-87692120 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr7_2:87692104-87692123 | Msa1087050:CDS | 10.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr7_2:87692540-87692559 | Msa1087050:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr7_2:87692540-87692559 | Msa1087050:intron | 15.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr7_2:87692282-87692301 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr7_2:87692901-87692920 | Msa1087050:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr7_2:87692946-87692965 | Msa1087050:CDS | 20.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr7_2:87692282-87692301 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr7_2:87692901-87692920 | Msa1087050:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr7_2:87692946-87692965 | Msa1087050:CDS | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr7_2:87692059-87692078 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr7_2:87692060-87692079 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr7_2:87692180-87692199 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr7_2:87692181-87692200 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr7_2:87692182-87692201 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr7_2:87692283-87692302 | Msa1087050:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr7_2:87692288-87692307 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr7_2:87692425-87692444 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr7_2:87692648-87692667 | Msa1087050:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr7_2:87692724-87692743 | Msa1087050:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr7_2:87692725-87692744 | Msa1087050:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr7_2:87692792-87692811 | Msa1087050:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr7_2:87692802-87692821 | Msa1087050:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr7_2:87692865-87692884 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr7_2:87692947-87692966 | Msa1087050:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr7_2:87693001-87693020 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr7_2:87693201-87693220 | None:intergenic | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr7_2:87692059-87692078 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr7_2:87692060-87692079 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr7_2:87692180-87692199 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr7_2:87692181-87692200 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr7_2:87692182-87692201 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr7_2:87692283-87692302 | Msa1087050:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr7_2:87692288-87692307 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr7_2:87692425-87692444 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr7_2:87692648-87692667 | Msa1087050:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr7_2:87692724-87692743 | Msa1087050:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr7_2:87692725-87692744 | Msa1087050:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr7_2:87692792-87692811 | Msa1087050:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr7_2:87692802-87692821 | Msa1087050:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr7_2:87692865-87692884 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr7_2:87692947-87692966 | Msa1087050:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr7_2:87693001-87693020 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr7_2:87693201-87693220 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr7_2:87692054-87692073 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr7_2:87692094-87692113 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr7_2:87692148-87692167 | Msa1087050:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr7_2:87692225-87692244 | Msa1087050:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr7_2:87692781-87692800 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr7_2:87692782-87692801 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr7_2:87692780-87692799 | Msa1087050:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr7_2:87692797-87692816 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr7_2:87692795-87692814 | Msa1087050:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr7_2:87692801-87692820 | Msa1087050:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr7_2:87693191-87693210 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr7_2:87693215-87693234 | Msa1087050:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr7_2:87693317-87693336 | Msa1087050:CDS | 30.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr7_2:87692054-87692073 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr7_2:87692094-87692113 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr7_2:87692148-87692167 | Msa1087050:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr7_2:87692225-87692244 | Msa1087050:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr7_2:87692781-87692800 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr7_2:87692782-87692801 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr7_2:87692780-87692799 | Msa1087050:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr7_2:87692797-87692816 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr7_2:87692795-87692814 | Msa1087050:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr7_2:87692801-87692820 | Msa1087050:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr7_2:87693191-87693210 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr7_2:87693215-87693234 | Msa1087050:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr7_2:87693317-87693336 | Msa1087050:CDS | 30.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr7_2:87692093-87692112 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr7_2:87692212-87692231 | Msa1087050:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr7_2:87692218-87692237 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr7_2:87692316-87692335 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr7_2:87692579-87692598 | Msa1087050:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr7_2:87692607-87692626 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr7_2:87692779-87692798 | Msa1087050:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr7_2:87693003-87693022 | Msa1087050:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr7_2:87693031-87693050 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr7_2:87693033-87693052 | Msa1087050:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr7_2:87693101-87693120 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr7_2:87693111-87693130 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr7_2:87693112-87693131 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr7_2:87693169-87693188 | Msa1087050:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr7_2:87693190-87693209 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr7_2:87693214-87693233 | Msa1087050:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr7_2:87693216-87693235 | Msa1087050:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr7_2:87693318-87693337 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr7_2:87693316-87693335 | Msa1087050:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr7_2:87693318-87693337 | Msa1087050:CDS | 35.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr7_2:87692093-87692112 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr7_2:87692212-87692231 | Msa1087050:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr7_2:87692218-87692237 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr7_2:87692316-87692335 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr7_2:87692579-87692598 | Msa1087050:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr7_2:87692607-87692626 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr7_2:87692779-87692798 | Msa1087050:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr7_2:87693003-87693022 | Msa1087050:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr7_2:87693031-87693050 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr7_2:87693033-87693052 | Msa1087050:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr7_2:87693101-87693120 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr7_2:87693111-87693130 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr7_2:87693112-87693131 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr7_2:87693169-87693188 | Msa1087050:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr7_2:87693190-87693209 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr7_2:87693214-87693233 | Msa1087050:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr7_2:87693216-87693235 | Msa1087050:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr7_2:87693318-87693337 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr7_2:87693316-87693335 | Msa1087050:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr7_2:87693318-87693337 | Msa1087050:CDS | 35.0% |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr7_2:87691967-87691986 | Msa1087050:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr7_2:87691998-87692017 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr7_2:87692013-87692032 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr7_2:87692018-87692037 | Msa1087050:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr7_2:87692025-87692044 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr7_2:87692092-87692111 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr7_2:87692211-87692230 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr7_2:87692265-87692284 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr7_2:87692269-87692288 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr7_2:87692390-87692409 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr7_2:87692389-87692408 | Msa1087050:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr7_2:87692737-87692756 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr7_2:87692758-87692777 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr7_2:87692951-87692970 | Msa1087050:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr7_2:87693110-87693129 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr7_2:87693121-87693140 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr7_2:87693131-87693150 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr7_2:87693161-87693180 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr7_2:87693175-87693194 | Msa1087050:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr7_2:87693217-87693236 | Msa1087050:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr7_2:87693259-87693278 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr7_2:87693262-87693281 | Msa1087050:intron | 40.0% | |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr7_2:87691967-87691986 | Msa1087050:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr7_2:87691998-87692017 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr7_2:87692013-87692032 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr7_2:87692018-87692037 | Msa1087050:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr7_2:87692025-87692044 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr7_2:87692092-87692111 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr7_2:87692211-87692230 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr7_2:87692265-87692284 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr7_2:87692269-87692288 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr7_2:87692390-87692409 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr7_2:87692389-87692408 | Msa1087050:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr7_2:87692737-87692756 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr7_2:87692758-87692777 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr7_2:87692951-87692970 | Msa1087050:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr7_2:87693110-87693129 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr7_2:87693121-87693140 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr7_2:87693131-87693150 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr7_2:87693161-87693180 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr7_2:87693175-87693194 | Msa1087050:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr7_2:87693217-87693236 | Msa1087050:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr7_2:87693259-87693278 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr7_2:87693262-87693281 | Msa1087050:intron | 40.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr7_2:87691999-87692018 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr7_2:87692091-87692110 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr7_2:87692303-87692322 | Msa1087050:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr7_2:87692307-87692326 | Msa1087050:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr7_2:87692313-87692332 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr7_2:87692361-87692380 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr7_2:87692362-87692381 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr7_2:87692363-87692382 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr7_2:87692362-87692381 | Msa1087050:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr7_2:87692708-87692727 | Msa1087050:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr7_2:87692812-87692831 | Msa1087050:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr7_2:87692956-87692975 | Msa1087050:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr7_2:87692973-87692992 | Msa1087050:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr7_2:87693046-87693065 | Msa1087050:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr7_2:87693221-87693240 | Msa1087050:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr7_2:87693222-87693241 | Msa1087050:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr7_2:87693238-87693257 | Msa1087050:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr7_2:87693290-87693309 | None:intergenic | 45.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr7_2:87691999-87692018 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr7_2:87692091-87692110 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr7_2:87692303-87692322 | Msa1087050:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr7_2:87692307-87692326 | Msa1087050:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr7_2:87692313-87692332 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr7_2:87692361-87692380 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr7_2:87692362-87692381 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr7_2:87692363-87692382 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr7_2:87692362-87692381 | Msa1087050:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr7_2:87692708-87692727 | Msa1087050:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr7_2:87692812-87692831 | Msa1087050:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr7_2:87692956-87692975 | Msa1087050:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr7_2:87692973-87692992 | Msa1087050:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr7_2:87693046-87693065 | Msa1087050:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr7_2:87693221-87693240 | Msa1087050:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr7_2:87693222-87693241 | Msa1087050:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr7_2:87693238-87693257 | Msa1087050:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr7_2:87693290-87693309 | None:intergenic | 45.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr7_2:87692090-87692109 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr7_2:87692740-87692759 | Msa1087050:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr7_2:87693015-87693034 | Msa1087050:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr7_2:87693054-87693073 | Msa1087050:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr7_2:87693146-87693165 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr7_2:87693228-87693247 | Msa1087050:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr7_2:87693291-87693310 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr7_2:87693288-87693307 | Msa1087050:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr7_2:87693301-87693320 | Msa1087050:CDS | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr7_2:87692090-87692109 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr7_2:87692740-87692759 | Msa1087050:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr7_2:87693015-87693034 | Msa1087050:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr7_2:87693054-87693073 | Msa1087050:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr7_2:87693146-87693165 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr7_2:87693228-87693247 | Msa1087050:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr7_2:87693291-87693310 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr7_2:87693288-87693307 | Msa1087050:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr7_2:87693301-87693320 | Msa1087050:CDS | 50.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr7_2:87692088-87692107 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr7_2:87692089-87692108 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr7_2:87692690-87692709 | Msa1087050:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr7_2:87692691-87692710 | Msa1087050:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr7_2:87692699-87692718 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr7_2:87693142-87693161 | Msa1087050:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr7_2:87693280-87693299 | Msa1087050:intron | 55.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr7_2:87692088-87692107 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr7_2:87692089-87692108 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr7_2:87692690-87692709 | Msa1087050:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr7_2:87692691-87692710 | Msa1087050:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr7_2:87692699-87692718 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr7_2:87693142-87693161 | Msa1087050:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr7_2:87693280-87693299 | Msa1087050:intron | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr7_2:87692339-87692358 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr7_2:87692356-87692375 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr7_2:87692354-87692373 | Msa1087050:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr7_2:87692695-87692714 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr7_2:87692692-87692711 | Msa1087050:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr7_2:87692696-87692715 | None:intergenic | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr7_2:87692339-87692358 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr7_2:87692356-87692375 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr7_2:87692354-87692373 | Msa1087050:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr7_2:87692695-87692714 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr7_2:87692692-87692711 | Msa1087050:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr7_2:87692696-87692715 | None:intergenic | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr7_2:87692349-87692368 | None:intergenic | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr7_2:87692349-87692368 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 87691956 | 87693357 | 87691956 | ID=Msa1087050;Name=Msa1087050 |
| chr7_2 | mRNA | 87691956 | 87693357 | 87691956 | ID=Msa1087050-mRNA-1;Parent=Msa1087050;Name=Msa1087050-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|157 |
| chr7_2 | exon | 87693281 | 87693357 | 87693281 | ID=Msa1087050-mRNA-1:exon:23987;Parent=Msa1087050-mRNA-1 |
| chr7_2 | exon | 87693144 | 87693187 | 87693144 | ID=Msa1087050-mRNA-1:exon:23986;Parent=Msa1087050-mRNA-1 |
| chr7_2 | exon | 87692930 | 87692988 | 87692930 | ID=Msa1087050-mRNA-1:exon:23985;Parent=Msa1087050-mRNA-1 |
| chr7_2 | exon | 87691956 | 87692249 | 87691956 | ID=Msa1087050-mRNA-1:exon:23984;Parent=Msa1087050-mRNA-1 |
| chr7_2 | CDS | 87693281 | 87693357 | 87693281 | ID=Msa1087050-mRNA-1:cds;Parent=Msa1087050-mRNA-1 |
| chr7_2 | CDS | 87693144 | 87693187 | 87693144 | ID=Msa1087050-mRNA-1:cds;Parent=Msa1087050-mRNA-1 |
| chr7_2 | CDS | 87692930 | 87692988 | 87692930 | ID=Msa1087050-mRNA-1:cds;Parent=Msa1087050-mRNA-1 |
| chr7_2 | CDS | 87691956 | 87692249 | 87691956 | ID=Msa1087050-mRNA-1:cds;Parent=Msa1087050-mRNA-1 |
| Gene Sequence |
| Protein sequence |
