Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908670 | AES69829.1 | 75.145 | 173 | 12 | 2 | 1 | 150 | 1 | 165 | 2.67e-75 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908670 | sp|A4GYN8|RR12B_POPTR | 95.876 | 97 | 4 | 0 | 61 | 157 | 39 | 135 | 3.89e-61 | 187 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0126750 | Msa0908670 | 0.802403 | 5.705267e-49 | -8.615850e-47 |
| Msa0139800 | Msa0908670 | 0.800818 | 1.205423e-48 | -8.615850e-47 |
| Msa0202640 | Msa0908670 | 0.848407 | 6.250444e-60 | -8.615850e-47 |
| Msa0370210 | Msa0908670 | 0.805937 | 1.048837e-49 | -8.615850e-47 |
| Msa0405420 | Msa0908670 | 0.861683 | 8.635365e-64 | -8.615850e-47 |
| Msa0405430 | Msa0908670 | 0.849725 | 2.689975e-60 | -8.615850e-47 |
| Msa0405440 | Msa0908670 | 0.913353 | 6.793512e-84 | -8.615850e-47 |
| Msa0405510 | Msa0908670 | 0.858309 | 9.001969e-63 | -8.615850e-47 |
| Msa0405520 | Msa0908670 | 0.839123 | 1.912177e-57 | -8.615850e-47 |
| Msa0405530 | Msa0908670 | 0.929620 | 5.348497e-93 | -8.615850e-47 |
| Msa0263770 | Msa0908670 | 0.872079 | 4.188005e-67 | -8.615850e-47 |
| Msa0268170 | Msa0908670 | 0.817861 | 2.647261e-52 | -8.615850e-47 |
| Msa0268190 | Msa0908670 | 0.805338 | 1.400868e-49 | -8.615850e-47 |
| Msa0268210 | Msa0908670 | 0.818742 | 1.672160e-52 | -8.615850e-47 |
| Msa0268250 | Msa0908670 | 0.849327 | 3.471992e-60 | -8.615850e-47 |
| Msa0268260 | Msa0908670 | 0.860032 | 2.740681e-63 | -8.615850e-47 |
| Msa0268270 | Msa0908670 | 0.935156 | 1.319572e-96 | -8.615850e-47 |
| Msa0268300 | Msa0908670 | 0.884305 | 2.147389e-71 | -8.615850e-47 |
| Msa0268310 | Msa0908670 | 0.851062 | 1.133113e-60 | -8.615850e-47 |
| Msa0268390 | Msa0908670 | 0.813566 | 2.399387e-51 | -8.615850e-47 |
| Msa0268410 | Msa0908670 | 0.815505 | 8.930699e-52 | -8.615850e-47 |
| Msa0268430 | Msa0908670 | 0.814066 | 1.861412e-51 | -8.615850e-47 |
| Msa0268450 | Msa0908670 | 0.806027 | 1.004164e-49 | -8.615850e-47 |
| Msa0268550 | Msa0908670 | 0.813830 | 2.098060e-51 | -8.615850e-47 |
| Msa0268560 | Msa0908670 | 0.833283 | 5.830575e-56 | -8.615850e-47 |
| Msa0268570 | Msa0908670 | 0.834063 | 3.720849e-56 | -8.615850e-47 |
| Msa0268580 | Msa0908670 | 0.812899 | 3.361569e-51 | -8.615850e-47 |
| Msa0268630 | Msa0908670 | 0.841422 | 4.798746e-58 | -8.615850e-47 |
| Msa0268640 | Msa0908670 | 0.801978 | 6.974755e-49 | -8.615850e-47 |
| Msa0268670 | Msa0908670 | 0.801020 | 1.096165e-48 | -8.615850e-47 |
| Msa0268720 | Msa0908670 | 0.806223 | 9.129685e-50 | -8.615850e-47 |
| Msa0268740 | Msa0908670 | 0.843338 | 1.490448e-58 | -8.615850e-47 |
| Msa0268750 | Msa0908670 | 0.847375 | 1.203767e-59 | -8.615850e-47 |
| Msa0268830 | Msa0908670 | 0.864477 | 1.182217e-64 | -8.615850e-47 |
| Msa0268840 | Msa0908670 | 0.812641 | 3.827713e-51 | -8.615850e-47 |
| Msa0268860 | Msa0908670 | 0.819296 | 1.251004e-52 | -8.615850e-47 |
| Msa0268880 | Msa0908670 | 0.801064 | 1.073704e-48 | -8.615850e-47 |
| Msa0268940 | Msa0908670 | 0.810522 | 1.105757e-50 | -8.615850e-47 |
| Msa0268950 | Msa0908670 | 0.842694 | 2.211546e-58 | -8.615850e-47 |
| Msa0268960 | Msa0908670 | 0.854202 | 1.439949e-61 | -8.615850e-47 |
| Msa0269040 | Msa0908670 | 0.857816 | 1.261211e-62 | -8.615850e-47 |
| Msa0269050 | Msa0908670 | 0.817039 | 4.055334e-52 | -8.615850e-47 |
| Msa0269070 | Msa0908670 | 0.816868 | 4.429707e-52 | -8.615850e-47 |
| Msa0269130 | Msa0908670 | 0.824907 | 6.258506e-54 | -8.615850e-47 |
| Msa0269140 | Msa0908670 | 0.873725 | 1.177165e-67 | -8.615850e-47 |
| Msa0269150 | Msa0908670 | 0.953024 | 6.793340e-111 | -8.615850e-47 |
| Msa0344180 | Msa0908670 | 0.800655 | 1.301572e-48 | -8.615850e-47 |
| Msa0344190 | Msa0908670 | 0.839786 | 1.286794e-57 | -8.615850e-47 |
| Msa0344310 | Msa0908670 | 0.851650 | 7.729915e-61 | -8.615850e-47 |
| Msa0484040 | Msa0908670 | 0.816830 | 4.516877e-52 | -8.615850e-47 |
| Msa0582510 | Msa0908670 | 0.851735 | 7.310818e-61 | -8.615850e-47 |
| Msa0582520 | Msa0908670 | 0.804642 | 1.958310e-49 | -8.615850e-47 |
| Msa0582540 | Msa0908670 | 0.815749 | 7.881617e-52 | -8.615850e-47 |
| Msa0582630 | Msa0908670 | 0.811993 | 5.300670e-51 | -8.615850e-47 |
| Msa0582640 | Msa0908670 | 0.829963 | 3.835713e-55 | -8.615850e-47 |
| Msa0582650 | Msa0908670 | 0.842674 | 2.239129e-58 | -8.615850e-47 |
| Msa0582690 | Msa0908670 | 0.855301 | 6.915880e-62 | -8.615850e-47 |
| Msa0582700 | Msa0908670 | 0.815398 | 9.435704e-52 | -8.615850e-47 |
| Msa0582730 | Msa0908670 | 0.803311 | 3.702962e-49 | -8.615850e-47 |
| Msa0582760 | Msa0908670 | 0.837840 | 4.099229e-57 | -8.615850e-47 |
| Msa0582770 | Msa0908670 | 0.837175 | 6.071019e-57 | -8.615850e-47 |
| Msa0582780 | Msa0908670 | 0.802759 | 4.817093e-49 | -8.615850e-47 |
| Msa0582810 | Msa0908670 | 0.857614 | 1.447955e-62 | -8.615850e-47 |
| Msa0582820 | Msa0908670 | 0.809352 | 1.974667e-50 | -8.615850e-47 |
| Msa0582840 | Msa0908670 | 0.809339 | 1.986912e-50 | -8.615850e-47 |
| Msa0582910 | Msa0908670 | 0.834193 | 3.453077e-56 | -8.615850e-47 |
| Msa0582920 | Msa0908670 | 0.849536 | 3.037152e-60 | -8.615850e-47 |
| Msa0591270 | Msa0908670 | 0.824171 | 9.326985e-54 | -8.615850e-47 |
| Msa0591290 | Msa0908670 | 0.809018 | 2.327629e-50 | -8.615850e-47 |
| Msa0591310 | Msa0908670 | 0.876114 | 1.806277e-68 | -8.615850e-47 |
| Msa0591350 | Msa0908670 | 0.904001 | 1.935645e-79 | -8.615850e-47 |
| Msa0591360 | Msa0908670 | 0.845751 | 3.339605e-59 | -8.615850e-47 |
| Msa0591380 | Msa0908670 | 0.842292 | 2.827058e-58 | -8.615850e-47 |
| Msa0867680 | Msa0908670 | 0.889565 | 2.162480e-73 | -8.615850e-47 |
| Msa0867690 | Msa0908670 | 0.854634 | 1.080423e-61 | -8.615850e-47 |
| Msa0876520 | Msa0908670 | 0.860035 | 2.734097e-63 | -8.615850e-47 |
| Msa0908220 | Msa0908670 | 0.862387 | 5.254247e-64 | -8.615850e-47 |
| Msa0908230 | Msa0908670 | 0.878935 | 1.877397e-69 | -8.615850e-47 |
| Msa0908240 | Msa0908670 | 0.947708 | 3.975958e-106 | -8.615850e-47 |
| Msa0908310 | Msa0908670 | 0.915303 | 6.910685e-85 | -8.615850e-47 |
| Msa0908320 | Msa0908670 | 0.870375 | 1.530744e-66 | -8.615850e-47 |
| Msa0908370 | Msa0908670 | 0.921326 | 4.127288e-88 | -8.615850e-47 |
| Msa0908380 | Msa0908670 | 0.852412 | 4.694251e-61 | -8.615850e-47 |
| Msa0908430 | Msa0908670 | 0.872737 | 2.525953e-67 | -8.615850e-47 |
| Msa0908440 | Msa0908670 | 0.902733 | 7.165325e-79 | -8.615850e-47 |
| Msa0908450 | Msa0908670 | 0.964369 | 3.060707e-123 | -8.615850e-47 |
| Msa0908480 | Msa0908670 | 0.858855 | 6.185219e-63 | -8.615850e-47 |
| Msa0908530 | Msa0908670 | 0.935683 | 5.763272e-97 | -8.615850e-47 |
| Msa0908540 | Msa0908670 | 0.865231 | 6.860766e-65 | -8.615850e-47 |
| Msa0908590 | Msa0908670 | 0.860500 | 1.978235e-63 | -8.615850e-47 |
| Msa0908600 | Msa0908670 | 0.871905 | 4.783307e-67 | -8.615850e-47 |
| Msa0908610 | Msa0908670 | 0.960925 | 4.126791e-119 | -8.615850e-47 |
| Msa0908650 | Msa0908670 | 0.859693 | 3.466654e-63 | -8.615850e-47 |
| Msa0908660 | Msa0908670 | 0.878128 | 3.606803e-69 | -8.615850e-47 |
| Msa0908670 | Msa0908720 | 0.918685 | 1.148316e-86 | -8.615850e-47 |
| Msa0908670 | Msa0908730 | 0.829997 | 3.763338e-55 | -8.615850e-47 |
| Msa0908670 | Msa0911190 | 0.909843 | 3.634966e-82 | -8.615850e-47 |
| Msa0908670 | Msa0911200 | 0.843947 | 1.024001e-58 | -8.615850e-47 |
| Msa0908670 | Msa0911230 | 0.886158 | 4.363942e-72 | -8.615850e-47 |
| Msa0908670 | Msa0924830 | 0.829915 | 3.939837e-55 | -8.615850e-47 |
| Msa0908670 | Msa0924870 | 0.812456 | 4.201795e-51 | -8.615850e-47 |
| Msa0908670 | Msa0924880 | 0.819796 | 9.621677e-53 | -8.615850e-47 |
| Msa0908670 | Msa0924920 | 0.876702 | 1.131992e-68 | -8.615850e-47 |
| Msa0908670 | Msa0924930 | 0.869814 | 2.335013e-66 | -8.615850e-47 |
| Msa0908670 | Msa0924940 | 0.858655 | 7.096906e-63 | -8.615850e-47 |
| Msa0908670 | Msa0925100 | 0.924520 | 6.313227e-90 | -8.615850e-47 |
| Msa0908670 | Msa0925110 | 0.874186 | 8.222097e-68 | -8.615850e-47 |
| Msa0908670 | Msa0931070 | 0.843254 | 1.568585e-58 | -8.615850e-47 |
| Msa0908670 | Msa0931080 | 0.800482 | 1.411897e-48 | -8.615850e-47 |
| Msa0908670 | Msa0931130 | 0.851398 | 9.107718e-61 | -8.615850e-47 |
| Msa0908670 | Msa0931160 | 0.801577 | 8.430950e-49 | -8.615850e-47 |
| Msa0908670 | Msa0931220 | 0.820986 | 5.132914e-53 | -8.615850e-47 |
| Msa0908670 | Msa0931230 | 0.821372 | 4.182213e-53 | -8.615850e-47 |
| Msa0908670 | Msa0931260 | 0.863555 | 2.289666e-64 | -8.615850e-47 |
| Msa0908670 | Msa0983630 | 0.906356 | 1.619510e-80 | -8.615850e-47 |
| Msa0908670 | Msa0983640 | 0.850141 | 2.056804e-60 | -8.615850e-47 |
| Msa0908670 | Msa1022050 | 0.916323 | 2.044713e-85 | -8.615850e-47 |
| Msa0908670 | Msa1022060 | 0.841619 | 4.256877e-58 | -8.615850e-47 |
| Msa0908670 | Msa1064410 | 0.855009 | 8.410986e-62 | -8.615850e-47 |
| Msa0908670 | Msa1086080 | 0.824435 | 8.083769e-54 | -8.615850e-47 |
| Msa0908670 | Msa1086090 | 0.835689 | 1.449972e-56 | -8.615850e-47 |
| Msa0908670 | Msa1086140 | 0.847309 | 1.254718e-59 | -8.615850e-47 |
| Msa0908670 | Msa1086150 | 0.803870 | 2.836312e-49 | -8.615850e-47 |
| Msa0908670 | Msa1086190 | 0.833266 | 5.885976e-56 | -8.615850e-47 |
| Msa0908670 | Msa1086200 | 0.850344 | 1.804702e-60 | -8.615850e-47 |
| Msa0908670 | Msa1086250 | 0.813724 | 2.214099e-51 | -8.615850e-47 |
| Msa0908670 | Msa1086270 | 0.841817 | 3.773919e-58 | -8.615850e-47 |
| Msa0908670 | Msa1086280 | 0.807599 | 4.671949e-50 | -8.615850e-47 |
| Msa0908670 | Msa1086380 | 0.821204 | 4.571520e-53 | -8.615850e-47 |
| Msa0908670 | Msa1086450 | 0.805624 | 1.219896e-49 | -8.615850e-47 |
| Msa0908670 | Msa1086470 | 0.814115 | 1.815752e-51 | -8.615850e-47 |
| Msa0908670 | Msa1086550 | 0.833867 | 4.166604e-56 | -8.615850e-47 |
| Msa0908670 | Msa1086590 | 0.832623 | 8.505365e-56 | -8.615850e-47 |
| Msa0908670 | Msa1086600 | 0.878929 | 1.885726e-69 | -8.615850e-47 |
| Msa0908670 | Msa1086720 | 0.873961 | 9.796178e-68 | -8.615850e-47 |
| Msa0908670 | Msa1086730 | 0.889201 | 2.992732e-73 | -8.615850e-47 |
| Msa0908670 | Msa1086740 | 0.940099 | 4.161152e-100 | -8.615850e-47 |
| Msa0908670 | Msa1086790 | 0.924317 | 8.279640e-90 | -8.615850e-47 |
| Msa0908670 | Msa1086800 | 0.864691 | 1.013373e-64 | -8.615850e-47 |
| Msa0908670 | Msa1086860 | 0.819834 | 9.432774e-53 | -8.615850e-47 |
| Msa0908670 | Msa1086880 | 0.810574 | 1.077156e-50 | -8.615850e-47 |
| Msa0908670 | Msa1086890 | 0.826013 | 3.424880e-54 | -8.615850e-47 |
| Msa0908670 | Msa1086900 | 0.845947 | 2.954406e-59 | -8.615850e-47 |
| Msa0908670 | Msa1086910 | 0.804615 | 1.984575e-49 | -8.615850e-47 |
| Msa0908670 | Msa1086960 | 0.929488 | 6.464581e-93 | -8.615850e-47 |
| Msa0908670 | Msa1086970 | 0.854737 | 1.008767e-61 | -8.615850e-47 |
| Msa0908670 | Msa1087030 | 0.867020 | 1.860849e-65 | -8.615850e-47 |
| Msa0908670 | Msa1087040 | 0.865514 | 5.587017e-65 | -8.615850e-47 |
| Msa0908670 | Msa1087050 | 0.933092 | 3.177115e-95 | -8.615850e-47 |
| Msa0908670 | Msa1087110 | 0.945296 | 3.980162e-104 | -8.615850e-47 |
| Msa0908670 | Msa1087120 | 0.857299 | 1.794817e-62 | -8.615850e-47 |
| Msa0908670 | Msa1143120 | 0.848684 | 5.237689e-60 | -8.615850e-47 |
| Msa0908670 | Msa1143160 | 0.813592 | 2.367263e-51 | -8.615850e-47 |
| Msa0908670 | Msa1143170 | 0.835083 | 2.062523e-56 | -8.615850e-47 |
| Msa0908670 | Msa1305090 | 0.839972 | 1.150354e-57 | -8.615850e-47 |
| Msa0908670 | Msa1354420 | 0.921257 | 4.510248e-88 | -8.615850e-47 |
| Msa0908670 | Msa1354430 | 0.857758 | 1.312303e-62 | -8.615850e-47 |
| Msa0908670 | Msa1354480 | 0.866302 | 3.148142e-65 | -8.615850e-47 |
| Msa0908670 | Msa1354490 | 0.869596 | 2.749761e-66 | -8.615850e-47 |
| Msa0908670 | Msa1354500 | 0.949123 | 2.401150e-107 | -8.615850e-47 |
| Msa0908670 | Msa1354550 | 0.927038 | 2.048789e-91 | -8.615850e-47 |
| Msa0908670 | Msa1354560 | 0.854558 | 1.136251e-61 | -8.615850e-47 |
| Msa0908670 | Msa1354610 | 0.887538 | 1.307198e-72 | -8.615850e-47 |
| Msa0908670 | Msa1354620 | 0.883005 | 6.469914e-71 | -8.615850e-47 |
| Msa0908670 | Msa1354630 | 0.956853 | 1.103282e-114 | -8.615850e-47 |
| Msa0908670 | Msa1354680 | 0.929772 | 4.299151e-93 | -8.615850e-47 |
| Msa0908670 | Msa1354690 | 0.868179 | 7.911703e-66 | -8.615850e-47 |
| Msa0908670 | Msa1354700 | 0.850864 | 1.288631e-60 | -8.615850e-47 |
| Msa0908670 | Msa1354740 | 0.878550 | 2.564870e-69 | -8.615850e-47 |
| Msa0908670 | Msa1354750 | 0.880684 | 4.482173e-70 | -8.615850e-47 |
| Msa0908670 | Msa1354760 | 0.951121 | 3.974701e-109 | -8.615850e-47 |
| Msa0908670 | Msa1354810 | 0.932962 | 3.868156e-95 | -8.615850e-47 |
| Msa0908670 | Msa1354820 | 0.855154 | 7.630969e-62 | -8.615850e-47 |
| Msa0908670 | Msa1354910 | 0.832834 | 7.540346e-56 | -8.615850e-47 |
| Msa0908670 | Msa1354920 | 0.842936 | 1.906969e-58 | -8.615850e-47 |
| Msa0908670 | Msa1354980 | 0.929435 | 6.974644e-93 | -8.615850e-47 |
| Msa0908670 | Msa1354990 | 0.876835 | 1.018104e-68 | -8.615850e-47 |
| Msa0908670 | Msa1355080 | 0.853183 | 2.828213e-61 | -8.615850e-47 |
| Msa0908670 | Msa1355090 | 0.843737 | 1.165806e-58 | -8.615850e-47 |
| Msa0908670 | Msa1355100 | 0.809177 | 2.151940e-50 | -8.615850e-47 |
| Msa0908670 | Msa1365890 | 0.905542 | 3.845054e-80 | -8.615850e-47 |
| Msa0908670 | Msa1365900 | 0.825369 | 4.866192e-54 | -8.615850e-47 |
| Msa0908670 | Msa1365950 | 0.855670 | 5.398849e-62 | -8.615850e-47 |
| Msa0908670 | Msa1365960 | 0.843268 | 1.555210e-58 | -8.615850e-47 |
| Msa0908670 | Msa1365970 | 0.926375 | 5.113086e-91 | -8.615850e-47 |
| Msa0908670 | Msa1366080 | 0.918998 | 7.790937e-87 | -8.615850e-47 |
| Msa0908670 | Msa1366090 | 0.835349 | 1.767126e-56 | -8.615850e-47 |
| Msa0908670 | Msa1368230 | 0.877872 | 4.432542e-69 | -8.615850e-47 |
| Msa0908670 | Msa1368240 | 0.933515 | 1.669674e-95 | -8.615850e-47 |
| Msa0908670 | Msa1380600 | 0.816586 | 5.124384e-52 | -8.615850e-47 |
| Msa0908670 | Msa1380610 | 0.818656 | 1.749575e-52 | -8.615850e-47 |
| Msa0908670 | Msa1380620 | 0.814303 | 1.649856e-51 | -8.615850e-47 |
| Msa0908670 | Msa1385410 | 0.884971 | 1.215023e-71 | -8.615850e-47 |
| Msa0908670 | Msa1385420 | 0.827737 | 1.326030e-54 | -8.615850e-47 |
| Msa0908670 | Msa1391090 | 0.840117 | 1.054727e-57 | -8.615850e-47 |
| Msa0908670 | Msa1391100 | 0.868411 | 6.661696e-66 | -8.615850e-47 |
| Msa0908670 | Msa1391110 | 0.935579 | 6.789472e-97 | -8.615850e-47 |
| Msa0908670 | Msa1391160 | 0.878404 | 2.885730e-69 | -8.615850e-47 |
| Msa0908670 | Msa1391170 | 0.860838 | 1.562093e-63 | -8.615850e-47 |
| Msa0908670 | Msa1391220 | 0.848408 | 6.249218e-60 | -8.615850e-47 |
| Msa0908670 | Msa1391230 | 0.841624 | 4.244398e-58 | -8.615850e-47 |
| Msa0908670 | Msa1391240 | 0.940578 | 1.836576e-100 | -8.615850e-47 |
| Msa0908670 | Msa1394030 | 0.837689 | 4.482414e-57 | -8.615850e-47 |
| Msa0908670 | Msa1394040 | 0.848313 | 6.634990e-60 | -8.615850e-47 |
| Msa0908670 | Msa1394060 | 0.802136 | 6.475063e-49 | -8.615850e-47 |
| Msa0908670 | Msa1394150 | 0.833189 | 6.152756e-56 | -8.615850e-47 |
| Msa0908670 | Msa1394160 | 0.832923 | 7.163083e-56 | -8.615850e-47 |
| Msa0908670 | Msa1394210 | 0.841982 | 3.415363e-58 | -8.615850e-47 |
| Msa0908670 | Msa1394250 | 0.805658 | 1.200187e-49 | -8.615850e-47 |
| Msa0908670 | Msa1460120 | 0.852683 | 3.929219e-61 | -8.615850e-47 |
| Msa0908670 | Msa1460130 | 0.853412 | 2.430957e-61 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908670 | MtrunA17_Chr7g0234981 | 88.636 | 88 | 10 | 0 | 70 | 157 | 6 | 93 | 2.85e-50 | 156 |
| Msa0908670 | MtrunA17_MTg0491661 | 67.470 | 83 | 27 | 0 | 75 | 157 | 41 | 123 | 8.51e-36 | 120 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0908670 | ATCG00905.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa0908670 | ATCG01230.1 | 98.824 | 85 | 1 | 0 | 73 | 157 | 1 | 85 | 1.03e-55 | 170 |
| Msa0908670 | AT2G07675.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
| Msa0908670 | ATMG00980.1 | 48.462 | 130 | 58 | 1 | 28 | 157 | 3 | 123 | 1.22e-34 | 118 |
Find 39 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGGCTAAAATAATTTATTT+TGG | 0.180484 | 6_2:+9778574 | None:intergenic |
| CAACAAGGTCGTTCTAAATA+TGG | 0.216871 | 6_2:-9778607 | Msa0908670:CDS |
| CAGAATGTTCTTGTAAATTA+TGG | 0.231614 | 6_2:+9778725 | None:intergenic |
| CTCGCCCCACAGCGACAAAA+TGG | 0.328779 | 6_2:-9779569 | Msa0908670:CDS |
| CCTTTACTCCGACAGCATCT+AGG | 0.372692 | 6_2:+9778635 | None:intergenic |
| ACTTTACGTAAGGCAGAGTT+TGG | 0.377633 | 6_2:+9778805 | None:intergenic |
| AACAAGGTCGTTCTAAATAT+GGG | 0.408379 | 6_2:-9778606 | Msa0908670:CDS |
| CATATTTAGAACGACCTTGT+TGG | 0.411865 | 6_2:+9778608 | None:intergenic |
| TTGTAAATTATGGCCAATAC+CGG | 0.438557 | 6_2:+9778735 | None:intergenic |
| CATTCTGTAGTCTTAGTAAG+AGG | 0.441296 | 6_2:-9778709 | Msa0908670:CDS |
| TATCACTACAACAAGCATAA+TGG | 0.443035 | 6_2:-9779775 | Msa0908670:intron |
| AACTCCAGTTACTTCGCAAA+TGG | 0.476097 | 6_2:+9779901 | None:intergenic |
| GCCAGAGTACGCTTAACCTC+TGG | 0.485872 | 6_2:-9778781 | Msa0908670:CDS |
| TCGCTGTGGGGCGAGGAGAA+AGG | 0.489722 | 6_2:+9779577 | None:intergenic |
| ACTGCTTATATACCCGGTAT+TGG | 0.491318 | 6_2:-9778748 | Msa0908670:CDS |
| GATCGTTGGCACAAGAAAGA+AGG | 0.502174 | 6_2:+9779927 | None:intergenic |
| CTTTACTCCGACAGCATCTA+GGG | 0.502834 | 6_2:+9778636 | None:intergenic |
| CCTAGATGCTGTCGGAGTAA+AGG | 0.506750 | 6_2:-9778635 | Msa0908670:CDS |
| TTCGCAAATGGTAAGATCGT+TGG | 0.515541 | 6_2:+9779913 | None:intergenic |
| AAATGGATAAATCAGAACTA+AGG | 0.516319 | 6_2:-9779969 | Msa0908670:CDS |
| AGAACTAAGGCAAGATGAGA+TGG | 0.530899 | 6_2:-9779956 | Msa0908670:CDS |
| TACTCTGGCAACTTTACGTA+AGG | 0.546111 | 6_2:+9778795 | None:intergenic |
| ATTCTGTAGTCTTAGTAAGA+GGG | 0.565369 | 6_2:-9778708 | Msa0908670:CDS |
| GGTTCTGTAGAGTGGCAGTA+AGG | 0.572203 | 6_2:-9778869 | Msa0908670:intron |
| TCCAGAGGTTAAGCGTACTC+TGG | 0.572579 | 6_2:+9778780 | None:intergenic |
| GAAATCACTGCTTATATACC+CGG | 0.578898 | 6_2:-9778754 | Msa0908670:CDS |
| GTGAGATATCACATTGTTCG+AGG | 0.586809 | 6_2:-9778661 | Msa0908670:CDS |
| ATCGTTGGCACAAGAAAGAA+GGG | 0.587101 | 6_2:+9779928 | None:intergenic |
| ACAGCGACAAAATGGAAGAC+TGG | 0.588097 | 6_2:-9779561 | Msa0908670:intron |
| TTCTGTAGTCTTAGTAAGAG+GGG | 0.592028 | 6_2:-9778707 | Msa0908670:CDS |
| GGAGTAAAGGATCGCCAACA+AGG | 0.599055 | 6_2:-9778622 | Msa0908670:CDS |
| TGTAAATTATGGCCAATACC+GGG | 0.601960 | 6_2:+9778736 | None:intergenic |
| CGAGGAACCCTAGATGCTGT+CGG | 0.617344 | 6_2:-9778643 | Msa0908670:CDS |
| AGCAGTGATTTCAAATCCAG+AGG | 0.620729 | 6_2:+9778765 | None:intergenic |
| GCGAGGAGAAAGGCAGCAAG+AGG | 0.621301 | 6_2:+9779587 | None:intergenic |
| ACAAGGTCGTTCTAAATATG+GGG | 0.627597 | 6_2:-9778605 | Msa0908670:CDS |
| GGAAGGGTTAAGGATTTACC+TGG | 0.642987 | 6_2:-9778685 | Msa0908670:CDS |
| TCTGTAGTCTTAGTAAGAGG+GGG | 0.664205 | 6_2:-9778706 | Msa0908670:CDS |
| ACAATGTGATATCTCACACC+AGG | 0.678462 | 6_2:+9778667 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr6_2:9778732-9778751 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr6_2:9778733-9778752 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr6_2:9778736-9778755 | Msa0908670:CDS | 10.0% |
| !!! | AAAAAAATTTACATTTTTCA+GGG | + | chr6_2:9778732-9778751 | None:intergenic | 10.0% |
| !!! | AAAAAAAATTTACATTTTTC+AGG | + | chr6_2:9778733-9778752 | None:intergenic | 10.0% |
| !!! | AAATGTAAATTTTTTTTCTT+AGG | - | chr6_2:9778736-9778755 | Msa0908670:CDS | 10.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr6_2:9779172-9779191 | Msa0908670:intron | 15.0% |
| !! | CATAGAATAGAAAATATTAA+TGG | - | chr6_2:9779172-9779191 | Msa0908670:intron | 15.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr6_2:9778914-9778933 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr6_2:9779533-9779552 | Msa0908670:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr6_2:9779578-9779597 | Msa0908670:CDS | 20.0% |
| !!! | TTAATATACAACATAGGTTT+TGG | + | chr6_2:9778914-9778933 | None:intergenic | 20.0% |
| !!! | AAAAAAGAAAAGTGTTCAAT+TGG | - | chr6_2:9779533-9779552 | Msa0908670:intron | 20.0% |
| !!! | AATTACTTCTCGTTATTTTT+CGG | - | chr6_2:9779578-9779597 | Msa0908670:CDS | 20.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr6_2:9778691-9778710 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr6_2:9778692-9778711 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr6_2:9778812-9778831 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr6_2:9778813-9778832 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr6_2:9778814-9778833 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr6_2:9778915-9778934 | Msa0908670:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr6_2:9778920-9778939 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr6_2:9779057-9779076 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr6_2:9779280-9779299 | Msa0908670:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr6_2:9779356-9779375 | Msa0908670:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr6_2:9779357-9779376 | Msa0908670:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr6_2:9779424-9779443 | Msa0908670:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr6_2:9779434-9779453 | Msa0908670:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr6_2:9779497-9779516 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr6_2:9779579-9779598 | Msa0908670:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr6_2:9779633-9779652 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr6_2:9779833-9779852 | None:intergenic | 25.0% |
| !!! | CACATAAGAACTTTTAGAAT+GGG | + | chr6_2:9778691-9778710 | None:intergenic | 25.0% |
| !!! | ACACATAAGAACTTTTAGAA+TGG | + | chr6_2:9778692-9778711 | None:intergenic | 25.0% |
| ! | TTACAAATTCTGTGTTAATG+GGG | + | chr6_2:9778812-9778831 | None:intergenic | 25.0% |
| ! | GTTACAAATTCTGTGTTAAT+GGG | + | chr6_2:9778813-9778832 | None:intergenic | 25.0% |
| ! | AGTTACAAATTCTGTGTTAA+TGG | + | chr6_2:9778814-9778833 | None:intergenic | 25.0% |
| ! | AACCTATGTTGTATATTAAG+AGG | - | chr6_2:9778915-9778934 | Msa0908670:intron | 25.0% |
| ! | AACCTCTTAATATACAACAT+AGG | + | chr6_2:9778920-9778939 | None:intergenic | 25.0% |
| ! | TAGTATTTAGTTAGTGATCT+CGG | + | chr6_2:9779057-9779076 | None:intergenic | 25.0% |
| !! | GATAGATATCTTTTCAACAT+AGG | - | chr6_2:9779280-9779299 | Msa0908670:intron | 25.0% |
| ! | AAAAAGGATTCCTATTCTAA+AGG | - | chr6_2:9779356-9779375 | Msa0908670:intron | 25.0% |
| ! | AAAAGGATTCCTATTCTAAA+GGG | - | chr6_2:9779357-9779376 | Msa0908670:intron | 25.0% |
| !!! | ATCCAATTGGGATTTTATTT+AGG | - | chr6_2:9779424-9779443 | Msa0908670:intron | 25.0% |
| !!! | GATTTTATTTAGGAGGTATT+GGG | - | chr6_2:9779434-9779453 | Msa0908670:intron | 25.0% |
| !! | GAAGATTATTCTTTTTCTTC+TGG | + | chr6_2:9779497-9779516 | None:intergenic | 25.0% |
| !!! | ATTACTTCTCGTTATTTTTC+GGG | - | chr6_2:9779579-9779598 | Msa0908670:CDS | 25.0% |
| ! | TTCAATTCTTTCGAAGTAAT+TGG | + | chr6_2:9779633-9779652 | None:intergenic | 25.0% |
| ! | CAGAATGTTCTTGTAAATTA+TGG | + | chr6_2:9779833-9779852 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr6_2:9778686-9778705 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr6_2:9778726-9778745 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr6_2:9778780-9778799 | Msa0908670:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr6_2:9778857-9778876 | Msa0908670:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr6_2:9779413-9779432 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr6_2:9779414-9779433 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr6_2:9779412-9779431 | Msa0908670:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr6_2:9779429-9779448 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr6_2:9779427-9779446 | Msa0908670:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr6_2:9779433-9779452 | Msa0908670:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr6_2:9779823-9779842 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr6_2:9779847-9779866 | Msa0908670:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr6_2:9779949-9779968 | Msa0908670:CDS | 30.0% |
| !!! | AAGAACTTTTAGAATGGGAA+TGG | + | chr6_2:9778686-9778705 | None:intergenic | 30.0% |
| !!! | ATTTACATTTTTCAGGGTCT+CGG | + | chr6_2:9778726-9778745 | None:intergenic | 30.0% |
| TATCACTACAACAAGCATAA+TGG | - | chr6_2:9778780-9778799 | Msa0908670:CDS | 30.0% | |
| AGTGAAAAGGATGATTCATT+CGG | - | chr6_2:9778857-9778876 | Msa0908670:CDS | 30.0% | |
| ! | CAATTGGATCTAAAATTGAC+GGG | + | chr6_2:9779413-9779432 | None:intergenic | 30.0% |
| ! | CCAATTGGATCTAAAATTGA+CGG | + | chr6_2:9779414-9779433 | None:intergenic | 30.0% |
| ! | CGTCAATTTTAGATCCAATT+GGG | - | chr6_2:9779412-9779431 | Msa0908670:intron | 30.0% |
| CTCCTAAATAAAATCCCAAT+TGG | + | chr6_2:9779429-9779448 | None:intergenic | 30.0% | |
| !! | CAATTGGGATTTTATTTAGG+AGG | - | chr6_2:9779427-9779446 | Msa0908670:intron | 30.0% |
| !! | GGATTTTATTTAGGAGGTAT+TGG | - | chr6_2:9779433-9779452 | Msa0908670:intron | 30.0% |
| TTGTAAATTATGGCCAATAC+CGG | + | chr6_2:9779823-9779842 | None:intergenic | 30.0% | |
| ! | ATTCTGTAGTCTTAGTAAGA+GGG | - | chr6_2:9779847-9779866 | Msa0908670:intron | 30.0% |
| ! | AACAAGGTCGTTCTAAATAT+GGG | - | chr6_2:9779949-9779968 | Msa0908670:CDS | 30.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr6_2:9778725-9778744 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr6_2:9778844-9778863 | Msa0908670:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr6_2:9778850-9778869 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr6_2:9778948-9778967 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr6_2:9779211-9779230 | Msa0908670:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr6_2:9779239-9779258 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr6_2:9779411-9779430 | Msa0908670:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr6_2:9779635-9779654 | Msa0908670:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr6_2:9779663-9779682 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr6_2:9779665-9779684 | Msa0908670:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr6_2:9779733-9779752 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr6_2:9779743-9779762 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr6_2:9779744-9779763 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr6_2:9779801-9779820 | Msa0908670:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr6_2:9779822-9779841 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr6_2:9779846-9779865 | Msa0908670:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr6_2:9779848-9779867 | Msa0908670:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr6_2:9779950-9779969 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr6_2:9779948-9779967 | Msa0908670:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr6_2:9779950-9779969 | Msa0908670:CDS | 35.0% |
| !!! | TTTACATTTTTCAGGGTCTC+GGG | + | chr6_2:9778725-9778744 | None:intergenic | 35.0% |
| TTGCCTAGTATTCAGTGAAA+AGG | - | chr6_2:9778844-9778863 | Msa0908670:CDS | 35.0% | |
| ! | CATCCTTTTCACTGAATACT+AGG | + | chr6_2:9778850-9778869 | None:intergenic | 35.0% |
| ATTGTACCATCCTAAAAGCA+AGG | + | chr6_2:9778948-9778967 | None:intergenic | 35.0% | |
| ! | TCTTTTCTGTATACTCTCTC+TGG | - | chr6_2:9779211-9779230 | Msa0908670:intron | 35.0% |
| TGTAAAGCGTGTGATAGTAA+CGG | + | chr6_2:9779239-9779258 | None:intergenic | 35.0% | |
| ! | CCGTCAATTTTAGATCCAAT+TGG | - | chr6_2:9779411-9779430 | Msa0908670:intron | 35.0% |
| TACTTCGAAAGAATTGAACG+AGG | - | chr6_2:9779635-9779654 | Msa0908670:intron | 35.0% | |
| ! | CATGAGATTTTCACCTCATA+CGG | + | chr6_2:9779663-9779682 | None:intergenic | 35.0% |
| TGAGGTGAAAATCTCATGTA+CGG | - | chr6_2:9779665-9779684 | Msa0908670:intron | 35.0% | |
| !!! | TGGTTTTTTAGGGGTAATAG+TGG | + | chr6_2:9779733-9779752 | None:intergenic | 35.0% |
| !!! | AGGCAGAGTTTGGTTTTTTA+GGG | + | chr6_2:9779743-9779762 | None:intergenic | 35.0% |
| !!! | AAGGCAGAGTTTGGTTTTTT+AGG | + | chr6_2:9779744-9779763 | None:intergenic | 35.0% |
| GAAATCACTGCTTATATACC+CGG | - | chr6_2:9779801-9779820 | Msa0908670:intron | 35.0% | |
| TGTAAATTATGGCCAATACC+GGG | + | chr6_2:9779822-9779841 | None:intergenic | 35.0% | |
| ! | CATTCTGTAGTCTTAGTAAG+AGG | - | chr6_2:9779846-9779865 | Msa0908670:intron | 35.0% |
| ! | TTCTGTAGTCTTAGTAAGAG+GGG | - | chr6_2:9779848-9779867 | Msa0908670:intron | 35.0% |
| ! | CATATTTAGAACGACCTTGT+TGG | + | chr6_2:9779950-9779969 | None:intergenic | 35.0% |
| ! | CAACAAGGTCGTTCTAAATA+TGG | - | chr6_2:9779948-9779967 | Msa0908670:CDS | 35.0% |
| ! | ACAAGGTCGTTCTAAATATG+GGG | - | chr6_2:9779950-9779969 | Msa0908670:CDS | 35.0% |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr6_2:9778599-9778618 | Msa0908670:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr6_2:9778630-9778649 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr6_2:9778645-9778664 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr6_2:9778650-9778669 | Msa0908670:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr6_2:9778657-9778676 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr6_2:9778724-9778743 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr6_2:9778843-9778862 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr6_2:9778897-9778916 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr6_2:9778901-9778920 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr6_2:9779022-9779041 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr6_2:9779021-9779040 | Msa0908670:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr6_2:9779369-9779388 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr6_2:9779390-9779409 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr6_2:9779583-9779602 | Msa0908670:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr6_2:9779742-9779761 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr6_2:9779753-9779772 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr6_2:9779763-9779782 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr6_2:9779793-9779812 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr6_2:9779807-9779826 | Msa0908670:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr6_2:9779849-9779868 | Msa0908670:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr6_2:9779891-9779910 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr6_2:9779894-9779913 | Msa0908670:intron | 40.0% | |
| AGAACTAAGGCAAGATGAGA+TGG | - | chr6_2:9778599-9778618 | Msa0908670:CDS | 40.0% | |
| ATCGTTGGCACAAGAAAGAA+GGG | + | chr6_2:9778630-9778649 | None:intergenic | 40.0% | |
| TTCGCAAATGGTAAGATCGT+TGG | + | chr6_2:9778645-9778664 | None:intergenic | 40.0% | |
| CTTACCATTTGCGAAGTAAC+TGG | - | chr6_2:9778650-9778669 | Msa0908670:CDS | 40.0% | |
| AACTCCAGTTACTTCGCAAA+TGG | + | chr6_2:9778657-9778676 | None:intergenic | 40.0% | |
| !!! | TTACATTTTTCAGGGTCTCG+GGG | + | chr6_2:9778724-9778743 | None:intergenic | 40.0% |
| TTCACTGAATACTAGGCAAG+AGG | + | chr6_2:9778843-9778862 | None:intergenic | 40.0% | |
| ! | TTTTGGCAATGCAATGTGGT+TGG | + | chr6_2:9778897-9778916 | None:intergenic | 40.0% |
| !! | TAGGTTTTGGCAATGCAATG+TGG | + | chr6_2:9778901-9778920 | None:intergenic | 40.0% |
| TTTCTTGCGTGATGAACTGT+TGG | + | chr6_2:9779022-9779041 | None:intergenic | 40.0% | |
| AACAGTTCATCACGCAAGAA+AGG | - | chr6_2:9779021-9779040 | Msa0908670:intron | 40.0% | |
| !! | GGTTATGCACCCTTTAGAAT+AGG | + | chr6_2:9779369-9779388 | None:intergenic | 40.0% |
| TTAGTGTGAGCTTATCCATG+CGG | + | chr6_2:9779390-9779409 | None:intergenic | 40.0% | |
| !!! | CTTCTCGTTATTTTTCGGGA+AGG | - | chr6_2:9779583-9779602 | Msa0908670:CDS | 40.0% |
| !!! | GGCAGAGTTTGGTTTTTTAG+GGG | + | chr6_2:9779742-9779761 | None:intergenic | 40.0% |
| ACTTTACGTAAGGCAGAGTT+TGG | + | chr6_2:9779753-9779772 | None:intergenic | 40.0% | |
| TACTCTGGCAACTTTACGTA+AGG | + | chr6_2:9779763-9779782 | None:intergenic | 40.0% | |
| AGCAGTGATTTCAAATCCAG+AGG | + | chr6_2:9779793-9779812 | None:intergenic | 40.0% | |
| ACTGCTTATATACCCGGTAT+TGG | - | chr6_2:9779807-9779826 | Msa0908670:intron | 40.0% | |
| ! | TCTGTAGTCTTAGTAAGAGG+GGG | - | chr6_2:9779849-9779868 | Msa0908670:intron | 40.0% |
| ACAATGTGATATCTCACACC+AGG | + | chr6_2:9779891-9779910 | None:intergenic | 40.0% | |
| GTGAGATATCACATTGTTCG+AGG | - | chr6_2:9779894-9779913 | Msa0908670:intron | 40.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr6_2:9778631-9778650 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr6_2:9778723-9778742 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr6_2:9778935-9778954 | Msa0908670:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr6_2:9778939-9778958 | Msa0908670:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr6_2:9778945-9778964 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr6_2:9778993-9779012 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr6_2:9778994-9779013 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr6_2:9778995-9779014 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr6_2:9778994-9779013 | Msa0908670:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr6_2:9779340-9779359 | Msa0908670:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr6_2:9779444-9779463 | Msa0908670:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr6_2:9779588-9779607 | Msa0908670:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr6_2:9779605-9779624 | Msa0908670:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr6_2:9779678-9779697 | Msa0908670:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr6_2:9779853-9779872 | Msa0908670:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr6_2:9779854-9779873 | Msa0908670:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr6_2:9779870-9779889 | Msa0908670:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr6_2:9779922-9779941 | None:intergenic | 45.0% | |
| GATCGTTGGCACAAGAAAGA+AGG | + | chr6_2:9778631-9778650 | None:intergenic | 45.0% | |
| !!! | TACATTTTTCAGGGTCTCGG+GGG | + | chr6_2:9778723-9778742 | None:intergenic | 45.0% |
| !! | AGGTTGACCTCCTTGCTTTT+AGG | - | chr6_2:9778935-9778954 | Msa0908670:intron | 45.0% |
| !! | TGACCTCCTTGCTTTTAGGA+TGG | - | chr6_2:9778939-9778958 | Msa0908670:intron | 45.0% |
| GTACCATCCTAAAAGCAAGG+AGG | + | chr6_2:9778945-9778964 | None:intergenic | 45.0% | |
| ! | TCTTCCATTTTGTCGCTGTG+GGG | + | chr6_2:9778993-9779012 | None:intergenic | 45.0% |
| ! | GTCTTCCATTTTGTCGCTGT+GGG | + | chr6_2:9778994-9779013 | None:intergenic | 45.0% |
| ! | AGTCTTCCATTTTGTCGCTG+TGG | + | chr6_2:9778995-9779014 | None:intergenic | 45.0% |
| ACAGCGACAAAATGGAAGAC+TGG | - | chr6_2:9778994-9779013 | Msa0908670:intron | 45.0% | |
| AGCGGGGATCTTTCACAAAA+AGG | - | chr6_2:9779340-9779359 | Msa0908670:intron | 45.0% | |
| !! | AGGAGGTATTGGGAACGAAT+TGG | - | chr6_2:9779444-9779463 | Msa0908670:intron | 45.0% |
| !!! | CGTTATTTTTCGGGAAGGAG+TGG | - | chr6_2:9779588-9779607 | Msa0908670:CDS | 45.0% |
| GAGTGGAGATTATCGAACGA+AGG | - | chr6_2:9779605-9779624 | Msa0908670:intron | 45.0% | |
| TCATGTACGGTTCTGTAGAG+TGG | - | chr6_2:9779678-9779697 | Msa0908670:intron | 45.0% | |
| ! | TAGTCTTAGTAAGAGGGGGA+AGG | - | chr6_2:9779853-9779872 | Msa0908670:intron | 45.0% |
| AGTCTTAGTAAGAGGGGGAA+GGG | - | chr6_2:9779854-9779873 | Msa0908670:intron | 45.0% | |
| GGAAGGGTTAAGGATTTACC+TGG | - | chr6_2:9779870-9779889 | Msa0908670:intron | 45.0% | |
| CTTTACTCCGACAGCATCTA+GGG | + | chr6_2:9779922-9779941 | None:intergenic | 45.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr6_2:9778722-9778741 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr6_2:9779372-9779391 | Msa0908670:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr6_2:9779647-9779666 | Msa0908670:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr6_2:9779686-9779705 | Msa0908670:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr6_2:9779778-9779797 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr6_2:9779860-9779879 | Msa0908670:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr6_2:9779923-9779942 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr6_2:9779920-9779939 | Msa0908670:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr6_2:9779933-9779952 | Msa0908670:CDS | 50.0% | |
| !!! | ACATTTTTCAGGGTCTCGGG+GGG | + | chr6_2:9778722-9778741 | None:intergenic | 50.0% |
| ! | CTAAAGGGTGCATAACCGCA+TGG | - | chr6_2:9779372-9779391 | Msa0908670:intron | 50.0% |
| ATTGAACGAGGAGCCGTATG+AGG | - | chr6_2:9779647-9779666 | Msa0908670:intron | 50.0% | |
| GGTTCTGTAGAGTGGCAGTA+AGG | - | chr6_2:9779686-9779705 | Msa0908670:intron | 50.0% | |
| TCCAGAGGTTAAGCGTACTC+TGG | + | chr6_2:9779778-9779797 | None:intergenic | 50.0% | |
| AGTAAGAGGGGGAAGGGTTA+AGG | - | chr6_2:9779860-9779879 | Msa0908670:intron | 50.0% | |
| CCTTTACTCCGACAGCATCT+AGG | + | chr6_2:9779923-9779942 | None:intergenic | 50.0% | |
| CCTAGATGCTGTCGGAGTAA+AGG | - | chr6_2:9779920-9779939 | Msa0908670:CDS | 50.0% | |
| GGAGTAAAGGATCGCCAACA+AGG | - | chr6_2:9779933-9779952 | Msa0908670:CDS | 50.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr6_2:9778720-9778739 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr6_2:9778721-9778740 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr6_2:9779322-9779341 | Msa0908670:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr6_2:9779323-9779342 | Msa0908670:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr6_2:9779331-9779350 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr6_2:9779774-9779793 | Msa0908670:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr6_2:9779912-9779931 | Msa0908670:intron | 55.0% | |
| !!! | ATTTTTCAGGGTCTCGGGGG+GGG | + | chr6_2:9778720-9778739 | None:intergenic | 55.0% |
| !!! | CATTTTTCAGGGTCTCGGGG+GGG | + | chr6_2:9778721-9778740 | None:intergenic | 55.0% |
| GACCCACCAAAGCACGAAAG+CGG | - | chr6_2:9779322-9779341 | Msa0908670:intron | 55.0% | |
| ACCCACCAAAGCACGAAAGC+GGG | - | chr6_2:9779323-9779342 | Msa0908670:intron | 55.0% | |
| AGATCCCCGCTTTCGTGCTT+TGG | + | chr6_2:9779331-9779350 | None:intergenic | 55.0% | |
| GCCAGAGTACGCTTAACCTC+TGG | - | chr6_2:9779774-9779793 | Msa0908670:intron | 55.0% | |
| CGAGGAACCCTAGATGCTGT+CGG | - | chr6_2:9779912-9779931 | Msa0908670:intron | 55.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr6_2:9778971-9778990 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr6_2:9778988-9779007 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr6_2:9778986-9779005 | Msa0908670:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr6_2:9779327-9779346 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr6_2:9779324-9779343 | Msa0908670:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr6_2:9779328-9779347 | None:intergenic | 60.0% | |
| GCGAGGAGAAAGGCAGCAAG+AGG | + | chr6_2:9778971-9778990 | None:intergenic | 60.0% | |
| ! | CATTTTGTCGCTGTGGGGCG+AGG | + | chr6_2:9778988-9779007 | None:intergenic | 60.0% |
| CTCGCCCCACAGCGACAAAA+TGG | - | chr6_2:9778986-9779005 | Msa0908670:intron | 60.0% | |
| CCCCGCTTTCGTGCTTTGGT+GGG | + | chr6_2:9779327-9779346 | None:intergenic | 60.0% | |
| CCCACCAAAGCACGAAAGCG+GGG | - | chr6_2:9779324-9779343 | Msa0908670:intron | 60.0% | |
| TCCCCGCTTTCGTGCTTTGG+TGG | + | chr6_2:9779328-9779347 | None:intergenic | 60.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr6_2:9778981-9779000 | None:intergenic | 65.0% | |
| TCGCTGTGGGGCGAGGAGAA+AGG | + | chr6_2:9778981-9779000 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 9778588 | 9779989 | 9778588 | ID=Msa0908670;Name=Msa0908670 |
| chr6_2 | mRNA | 9778588 | 9779989 | 9778588 | ID=Msa0908670-mRNA-1;Parent=Msa0908670;Name=Msa0908670-mRNA-1;_AED=0.48;_eAED=0.48;_QI=0|0|0|0.75|1|1|4|0|157 |
| chr6_2 | exon | 9779913 | 9779989 | 9779913 | ID=Msa0908670-mRNA-1:exon:2390;Parent=Msa0908670-mRNA-1 |
| chr6_2 | exon | 9779776 | 9779819 | 9779776 | ID=Msa0908670-mRNA-1:exon:2389;Parent=Msa0908670-mRNA-1 |
| chr6_2 | exon | 9779562 | 9779620 | 9779562 | ID=Msa0908670-mRNA-1:exon:2388;Parent=Msa0908670-mRNA-1 |
| chr6_2 | exon | 9778588 | 9778881 | 9778588 | ID=Msa0908670-mRNA-1:exon:2387;Parent=Msa0908670-mRNA-1 |
| chr6_2 | CDS | 9779913 | 9779989 | 9779913 | ID=Msa0908670-mRNA-1:cds;Parent=Msa0908670-mRNA-1 |
| chr6_2 | CDS | 9779776 | 9779819 | 9779776 | ID=Msa0908670-mRNA-1:cds;Parent=Msa0908670-mRNA-1 |
| chr6_2 | CDS | 9779562 | 9779620 | 9779562 | ID=Msa0908670-mRNA-1:cds;Parent=Msa0908670-mRNA-1 |
| chr6_2 | CDS | 9778588 | 9778881 | 9778588 | ID=Msa0908670-mRNA-1:cds;Parent=Msa0908670-mRNA-1 |
| Gene Sequence |
| Protein sequence |
