AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183760


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183760 MtrunA17_Chr8g0335501 74.627 268 11 4 29 245 29 290 2.25e-130 370
Msa1183760 MtrunA17_Chr3g0138321 35.556 135 74 4 81 206 155 285 2.18e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183760 AT1G07320.4 50.000 240 65 4 26 211 24 262 4.51e-65 204
Msa1183760 AT1G07320.3 50.000 240 65 4 26 211 24 262 4.51e-65 204
Msa1183760 AT1G07320.2 50.000 240 65 4 26 211 24 262 4.68e-65 204
Msa1183760 AT1G07320.1 50.000 240 65 4 26 211 24 262 4.97e-65 204
Msa1183760 AT2G20060.1 33.835 133 75 4 81 204 160 288 1.85e-11 63.5

Find 230 sgRNAs with CRISPR-Local

Find 567 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACGGTTGTGGTGGAGGAATT+TGG 0.166464 8_1:-19149649 Msa1183760:CDS
TTATTACGGCGATGAAAATT+TGG 0.167725 8_1:-19141911 Msa1183760:three_prime_UTR
ACAACATGAATTTATCTTCT+AGG 0.172827 8_1:-19142022 Msa1183760:three_prime_UTR
CGGTTGTGGTGGAGGAATTT+GGG 0.175200 8_1:-19149648 Msa1183760:CDS
ATTTGGAGTGAATTTGATTT+TGG 0.177945 8_1:+19150080 None:intergenic
TCAAGAAACATCATATTTAT+TGG 0.194001 8_1:-19142245 Msa1183760:three_prime_UTR
ATCCATAAGTTTCTTAGCTT+TGG 0.229663 8_1:+19144624 None:intergenic
TGTGAATTTGAATTTGAATT+TGG 0.231760 8_1:+19150063 None:intergenic
ATACTCCAATCCCTTGGTTT+GGG 0.237337 8_1:+19149736 None:intergenic
TGTACCTCCTCAATCTTCTT+TGG 0.252668 8_1:+19144475 None:intergenic
ACGAAAAGATAACATTTAAA+AGG 0.256920 8_1:-19142412 Msa1183760:three_prime_UTR
CAAGCTGGTAGCATGGATTT+TGG 0.257533 8_1:-19144418 Msa1183760:three_prime_UTR
TGCAAACTTATGAGTTCTAT+TGG 0.258652 8_1:-19142116 Msa1183760:three_prime_UTR
TTTGGTCCTAGCGGTATTAA+TGG 0.269585 8_1:-19144400 Msa1183760:three_prime_UTR
AATACTCCAATCCCTTGGTT+TGG 0.310060 8_1:+19149735 None:intergenic
TGCATGCTGATGAGTATTAT+TGG 0.311824 8_1:-19144664 Msa1183760:three_prime_UTR
TCCATAAGTTTCTTAGCTTT+GGG 0.313875 8_1:+19144625 None:intergenic
TTATCTGAGCGCACACCTTA+TGG 0.313943 8_1:-19144367 Msa1183760:three_prime_UTR
TATTACGGCGATGAAAATTT+GGG 0.320436 8_1:-19141910 Msa1183760:three_prime_UTR
AGAACAAGAAGAGGCAAATA+AGG 0.329980 8_1:-19142345 Msa1183760:three_prime_UTR
TTTCAATAGGCTTCTTGAAC+AGG 0.337764 8_1:-19142585 Msa1183760:three_prime_UTR
GCAAACTTATGAGTTCTATT+GGG 0.347210 8_1:-19142115 Msa1183760:three_prime_UTR
TTGTTGGCTAGTAGGAATAT+TGG 0.349461 8_1:-19149511 Msa1183760:CDS
GTTGAGAAGAAGTACAAAAT+AGG 0.354859 8_1:-19142680 Msa1183760:three_prime_UTR
TAACATGCGCCTTCTTGCCT+TGG 0.361754 8_1:+19144813 None:intergenic
TCCCAAAGCTAAGAAACTTA+TGG 0.364650 8_1:-19144626 Msa1183760:three_prime_UTR
TTCTTCAGATGAACGACTTC+AGG 0.365705 8_1:-19144149 Msa1183760:three_prime_UTR
CAACTCTCTACCCCTCTTCC+CGG 0.368200 8_1:+19145245 None:intergenic
AGAAAGTGTTGTTGGCTAGT+AGG 0.371480 8_1:-19141839 None:intergenic
CCAGCTCATAATATAAACTA+TGG 0.375408 8_1:-19144268 Msa1183760:three_prime_UTR
TTCAAATAATCCACCGCATC+AGG 0.377968 8_1:+19149415 None:intergenic
TGACATGTGCCTTCTTGCAT+TGG 0.377973 8_1:+19142265 None:intergenic
TTAGGAAACATCAGATTGAT+TGG 0.380663 8_1:-19144793 Msa1183760:three_prime_UTR
TAACTCCTCAGAATTTCAAT+AGG 0.384689 8_1:-19142598 Msa1183760:three_prime_UTR
AGAACAAGAAGAGGAAAATA+AGG 0.385590 8_1:-19144893 Msa1183760:three_prime_UTR
TCGTTGTCCACACTCAAATC+AGG 0.387004 8_1:+19142431 None:intergenic
TCGTTGTCCACACTCAAATC+AGG 0.387004 8_1:+19144979 None:intergenic
TAGGGTGAGGTTTATGTTGA+AGG 0.387044 8_1:-19142003 Msa1183760:three_prime_UTR
TGCCAACTTCTGCTCACATC+TGG 0.388294 8_1:-19142465 Msa1183760:three_prime_UTR
TGCCAACTTCTGCTCACATC+TGG 0.388294 8_1:-19145013 Msa1183760:three_prime_UTR
AGAAAGTGTTGTTGGCTAGT+AGG 0.396950 8_1:-19149519 Msa1183760:CDS
TTGATTTGAGAAGGAATAGA+TGG 0.397789 8_1:-19141974 Msa1183760:three_prime_UTR
TTGATTTGAGAAGGAATAGA+TGG 0.397789 8_1:-19144522 Msa1183760:three_prime_UTR
GGTGCCAAAGGGGTTTATTA+CGG 0.399721 8_1:-19141925 Msa1183760:three_prime_UTR
TAGGGTGAGGTTTATGTTGA+AGG 0.403405 8_1:-19144551 Msa1183760:three_prime_UTR
TCGGCACTTTCTTCTGCGTC+TGG 0.403489 8_1:+19147948 None:intergenic
TGTTGGCTAGTAGGAATATT+GGG 0.414394 8_1:-19149510 Msa1183760:CDS
AAGGCAAGAAGGCGCATGTT+AGG 0.418141 8_1:-19144811 Msa1183760:three_prime_UTR
GAAGGAATAGATGGCAAGTA+AGG 0.420946 8_1:-19141965 Msa1183760:three_prime_UTR
GAAGGAATAGATGGCAAGTA+AGG 0.420946 8_1:-19144513 Msa1183760:three_prime_UTR
GCCTCAACATCTTCCTCATC+AGG 0.425779 8_1:+19142143 None:intergenic
GCCTCAACATCTTCCTCATC+AGG 0.425779 8_1:+19144691 None:intergenic
GGAATTTGGGGATGAGTTTG+AGG 0.426910 8_1:-19149635 Msa1183760:CDS
CCTAGCGGTATTAATGGTTA+TGG 0.428094 8_1:-19144394 Msa1183760:three_prime_UTR
GCATACATTTCACAGAAGAT+AGG 0.430499 8_1:+19142485 None:intergenic
TCATATCCAGCTGGACTTGA+AGG 0.434008 8_1:+19144304 None:intergenic
GATTATTTGAATGGTAGGTA+TGG 0.435615 8_1:-19149403 Msa1183760:CDS
AAGGAATCAAACCCCTCTGC+TGG 0.437000 8_1:+19142735 None:intergenic
GAGTATTAAGATTAATAAGA+AGG 0.437393 8_1:-19149719 Msa1183760:CDS
ATTATTTGAATGGTAGGTAT+GGG 0.441937 8_1:-19149402 Msa1183760:CDS
ATCAGGATCGGAATCTCAAC+AGG 0.445733 8_1:-19144228 Msa1183760:three_prime_UTR
CAACAGAGACTTGAGGAATC+AGG 0.446316 8_1:-19144245 Msa1183760:three_prime_UTR
AGATGTTATGCAAGAGAGGC+AGG 0.447211 8_1:-19144449 Msa1183760:three_prime_UTR
CTCCCACTCCTCTCCTTCTC+CGG 0.450034 8_1:-19150000 Msa1183760:CDS
CAACATGAATTTATCTTCTA+GGG 0.451244 8_1:-19142021 Msa1183760:three_prime_UTR
CTTCCTTCTTCTCAGCCTTG+TGG 0.456631 8_1:+19145208 None:intergenic
TTGGCCCCAAACCAAGGGAT+TGG 0.458041 8_1:-19149741 Msa1183760:CDS
GCATGCTGATGAGTATTATT+GGG 0.458486 8_1:-19144663 Msa1183760:three_prime_UTR
AAGGAGGAAAGTTGATGAAA+AGG 0.461900 8_1:-19141946 Msa1183760:three_prime_UTR
ATCTTAATACTCCAATCCCT+TGG 0.462823 8_1:+19149730 None:intergenic
GAAGTAATAGTTGTAGAAGA+TGG 0.464741 8_1:-19149343 Msa1183760:CDS
GCATACACTTCACAGAAGAT+AGG 0.469793 8_1:+19145033 None:intergenic
ATCCATACGTTCCTTAGTTG+TGG 0.470304 8_1:+19142076 None:intergenic
TCCTTCTCCGGCGAGAAAAT+CGG 0.472488 8_1:-19149988 Msa1183760:CDS
GGTGGCGAGTTTGCAAGAAA+TGG 0.474159 8_1:+19150023 None:intergenic
ATCGCCGTAATAAACCCCTT+TGG 0.476838 8_1:+19141921 None:intergenic
TTCTACTAGCTTCCAGCAGA+GGG 0.478714 8_1:-19142747 Msa1183760:intron
CGCCGGAGAAGGAGAGGAGT+GGG 0.479277 8_1:+19149998 None:intergenic
CGGAGAAGGAGAGGAGTGGG+AGG 0.479353 8_1:+19150001 None:intergenic
CGGTGGATTATTTGAATGGT+AGG 0.480887 8_1:-19149408 Msa1183760:CDS
GAAAGAAAGAGAAGTTGAAG+TGG 0.483303 8_1:+19150137 None:intergenic
ACAGTACCTGTAGTATTCTC+TGG 0.484906 8_1:+19144108 None:intergenic
TTATTGCAGCGATGAAAAGA+TGG 0.486628 8_1:-19149591 Msa1183760:CDS
GTTGTAGAAGATGGTGAAGA+AGG 0.486799 8_1:-19149334 Msa1183760:intron
GGCGAGTGCAGCGGTGAATA+CGG 0.492300 8_1:-19149668 Msa1183760:CDS
CCATAGTTTATATTATGAGC+TGG 0.492444 8_1:+19144268 None:intergenic
CACCGCTCTCAAATTCCTCC+TGG 0.492585 8_1:+19142372 None:intergenic
CACCCCTCTCAAATTCCTCC+TGG 0.492995 8_1:+19144920 None:intergenic
GGTGAATACGGTTGTGGTGG+AGG 0.493119 8_1:-19149656 Msa1183760:CDS
GAAGTTACCAGGTCAGTGTC+AGG 0.496934 8_1:-19142168 Msa1183760:three_prime_UTR
ATGGAAAGAAATAGCCGTGC+CGG 0.497408 8_1:-19145264 Msa1183760:CDS
AATCTTCGAGAAGGCTCTGA+TGG 0.499796 8_1:-19142510 Msa1183760:three_prime_UTR
AATCTTCGAGAAGGCTCTGA+TGG 0.499796 8_1:-19145058 Msa1183760:three_prime_UTR
GGTTGATGAGGCCGAGGGTG+AGG 0.499924 8_1:-19142324 Msa1183760:three_prime_UTR
GGTTGATGAGGCCGAGGGTG+AGG 0.499924 8_1:-19144872 Msa1183760:three_prime_UTR
GATCCACAAGGCTGAGAAGA+AGG 0.500096 8_1:-19145211 Msa1183760:three_prime_UTR
TGAATTTATCTTCTAGGGTG+AGG 0.503088 8_1:-19142016 Msa1183760:three_prime_UTR
GATGCGGTGGATTATTTGAA+TGG 0.506981 8_1:-19149412 Msa1183760:CDS
AGGATGTAATTGATTTGAGA+AGG 0.507541 8_1:-19141983 Msa1183760:three_prime_UTR
AGGATGTAATTGATTTGAGA+AGG 0.507541 8_1:-19144531 Msa1183760:three_prime_UTR
TCCATACGTTCCTTAGTTGT+GGG 0.508568 8_1:+19142077 None:intergenic
GTTATTATTAAACAAATGCC+AGG 0.509500 8_1:-19142390 Msa1183760:three_prime_UTR
GAAATAGCCGTGCCGGGAAG+AGG 0.510985 8_1:-19145257 Msa1183760:CDS
GCGTGAGGTGAAGTTGCAAC+AGG 0.511152 8_1:+19144205 None:intergenic
GAATTTGGGGATGAGTTTGA+GGG 0.511647 8_1:-19149634 Msa1183760:CDS
TCACCTCACGCTCAGTCGCA+AGG 0.512633 8_1:-19144193 Msa1183760:three_prime_UTR
GACAGACCTTCAAGTCCAGC+TGG 0.512927 8_1:-19144310 Msa1183760:three_prime_UTR
GAAGGAGAGGAGTGGGAGGG+TGG 0.517110 8_1:+19150005 None:intergenic
CAAGTAAGGAGGAAAGTTGA+TGG 0.517622 8_1:-19144499 Msa1183760:three_prime_UTR
CAAGCTGTCAAATGAAGAAA+GGG 0.521481 8_1:-19142300 Msa1183760:three_prime_UTR
CAAGCTGTCAAATGAAGAAA+GGG 0.521481 8_1:-19144848 Msa1183760:three_prime_UTR
GGTGGAGGAGAAAGTGTTGT+TGG 0.521577 8_1:-19141847 Msa1183760:three_prime_UTR
TCAAGCTGTCAAATGAAGAA+AGG 0.526150 8_1:-19142301 Msa1183760:three_prime_UTR
TCAAGCTGTCAAATGAAGAA+AGG 0.526150 8_1:-19144849 Msa1183760:three_prime_UTR
GTGGACGACGGCGCGTGAGG+TGG 0.527072 8_1:+19149930 None:intergenic
GATTGACCATCCCACAACTA+AGG 0.527910 8_1:-19142087 Msa1183760:three_prime_UTR
AAATAGCCGTGCCGGGAAGA+GGG 0.528414 8_1:-19145256 Msa1183760:CDS
GGTGAAGGAGAAAGTGTTGT+TGG 0.529186 8_1:-19149527 Msa1183760:CDS
AGCCAGATGTGAGCAGAAGT+TGG 0.530655 8_1:+19145011 None:intergenic
GGCGATGAAAATTTGGGGAT+CGG 0.531839 8_1:-19141904 Msa1183760:three_prime_UTR
TGTAAGAGAGACTGAGGAGA+AGG 0.531986 8_1:+19142716 None:intergenic
AAATAAGGTTGATGAGGCCG+AGG 0.534130 8_1:-19142330 Msa1183760:three_prime_UTR
AAATAAGGTTGATGAGGCCG+AGG 0.534130 8_1:-19144878 Msa1183760:three_prime_UTR
GGAATAGATGGCAAGTAAGG+AGG 0.534393 8_1:-19141962 Msa1183760:three_prime_UTR
GGAATAGATGGCAAGTAAGG+AGG 0.534393 8_1:-19144510 Msa1183760:three_prime_UTR
AGAGAAGAACCAAGGCAAGA+AGG 0.535181 8_1:-19144822 Msa1183760:three_prime_UTR
TACTCCAATCCCTTGGTTTG+GGG 0.536999 8_1:+19149737 None:intergenic
TATTGCAGCGATGAAAAGAT+GGG 0.541925 8_1:-19149590 Msa1183760:CDS
CTTAAATGATCATATCCAGC+TGG 0.542297 8_1:+19144295 None:intergenic
AAAGAAAGAGAAGTTGAAGT+GGG 0.543428 8_1:+19150138 None:intergenic
GTTATTAGTAAACAAATGCC+AGG 0.544126 8_1:-19144938 Msa1183760:three_prime_UTR
AGCGATGAAAAGATGGGGAT+TGG 0.544663 8_1:-19149584 Msa1183760:CDS
TCCCACAACTAAGGAACGTA+TGG 0.545798 8_1:-19142078 Msa1183760:three_prime_UTR
CGGTGAGCGAGAACAAGAAG+AGG 0.546538 8_1:-19142354 Msa1183760:three_prime_UTR
TACGTTCCTTAGTTGTGGGA+TGG 0.546679 8_1:+19142081 None:intergenic
CAAGGCTGAGAAGAAGGAAG+AGG 0.548045 8_1:-19145205 Msa1183760:three_prime_UTR
TGAGTTGCCTGATTTGAGTG+TGG 0.548592 8_1:-19144986 Msa1183760:three_prime_UTR
GGTTGTGGTGGAGGAATTTG+GGG 0.548611 8_1:-19149647 Msa1183760:CDS
TAAGTTTCTTAGCTTTGGGA+TGG 0.550474 8_1:+19144629 None:intergenic
AGATCCTCTCTAGAGCCATA+AGG 0.551438 8_1:+19144352 None:intergenic
AGATTAATAAGAAGGAGAAG+AGG 0.552891 8_1:-19149711 Msa1183760:CDS
TGGAAAGAAATAGCCGTGCC+GGG 0.553316 8_1:-19145263 Msa1183760:CDS
GTTGATGAAAAGGTGCCAAA+GGG 0.553669 8_1:-19141936 Msa1183760:three_prime_UTR
AGCCAGATGTGAGCAGAAGT+TGG 0.554652 8_1:+19142463 None:intergenic
AGGCAGGCTCAAGCACAAGC+TGG 0.560236 8_1:-19144433 Msa1183760:three_prime_UTR
GCGGTGGACGACGGCGCGTG+AGG 0.567418 8_1:+19149927 None:intergenic
CAGCAACCAGAGAATACTAC+AGG 0.568349 8_1:-19144114 Msa1183760:intron
AGAAGAAAATGTTGACAGAG+AGG 0.570187 8_1:-19142211 Msa1183760:three_prime_UTR
AGAAGAAAATGTTGACAGAG+AGG 0.570187 8_1:-19144759 Msa1183760:three_prime_UTR
GACGCAGAAGAAAGTGCCGA+TGG 0.571572 8_1:-19147945 Msa1183760:CDS
CAAACTTATGAGTTCTATTG+GGG 0.571743 8_1:-19142114 Msa1183760:three_prime_UTR
ACGCAGAAGAAAGTGCCGAT+GGG 0.577486 8_1:-19147944 Msa1183760:CDS
CTCTACCCCTCTTCCCGGCA+CGG 0.578099 8_1:+19145250 None:intergenic
TGTTCTTACTCCTGATGCGG+TGG 0.578266 8_1:-19149425 Msa1183760:CDS
CACCTCACGCTCAGTCGCAA+GGG 0.579445 8_1:-19144192 Msa1183760:three_prime_UTR
TCCTGATGAGGAAGATGTTG+AGG 0.581097 8_1:-19142144 Msa1183760:three_prime_UTR
ATTACGGCGATGAAAATTTG+GGG 0.582306 8_1:-19141909 Msa1183760:three_prime_UTR
TAAAGTGTCAAATGCAGAAG+AGG 0.584479 8_1:-19142657 Msa1183760:three_prime_UTR
ACGACGGCGCGTGAGGTGGA+AGG 0.584809 8_1:+19149934 None:intergenic
AAATCACACCACCGCCGGGT+CGG 0.584856 8_1:+19149764 None:intergenic
TGACAGCTTGACCTCACCCT+CGG 0.585166 8_1:+19142313 None:intergenic
TGACAGCTTGACCTCACCCT+CGG 0.585166 8_1:+19144861 None:intergenic
AGTTGATGAAAAGGTGCCAA+AGG 0.585204 8_1:-19141937 Msa1183760:three_prime_UTR
TGCAGCGGTGAATACGGTTG+TGG 0.586863 8_1:-19149662 Msa1183760:CDS
ACAGAGATGTTATGCAAGAG+AGG 0.589004 8_1:-19144453 Msa1183760:three_prime_UTR
GGGTGAACGAGAACAAGAAG+AGG 0.589192 8_1:-19144902 Msa1183760:three_prime_UTR
CGCAGAAGAAAGTGCCGATG+GGG 0.589593 8_1:-19147943 Msa1183760:intron
AGAAGCCTATTGAAATTCTG+AGG 0.589728 8_1:+19142593 None:intergenic
GGAGAAGGAGAGGAGTGGGA+GGG 0.590282 8_1:+19150002 None:intergenic
AATTTGGGGATGAGTTTGAG+GGG 0.592221 8_1:-19149633 Msa1183760:CDS
TCCTGATGAGGAAGATGTTG+AGG 0.592876 8_1:-19144692 Msa1183760:three_prime_UTR
TCAGGATCCTGACACTGACC+TGG 0.593547 8_1:+19142161 None:intergenic
AGAGAAGAACCAATGCAAGA+AGG 0.595945 8_1:-19142274 Msa1183760:three_prime_UTR
TCATACAAATTCAACGTCCT+CGG 0.595999 8_1:+19149469 None:intergenic
ATGCCAGGAGGAATTTGAGA+GGG 0.598754 8_1:-19144923 Msa1183760:three_prime_UTR
AATAGCCGTGCCGGGAAGAG+GGG 0.601813 8_1:-19145255 Msa1183760:CDS
TGATGGTCCAAAGAAGATTG+AGG 0.603527 8_1:-19144482 Msa1183760:three_prime_UTR
TCAAGCACAAGCTGGTAGCA+TGG 0.604158 8_1:-19144425 Msa1183760:three_prime_UTR
GGGTCGGAGAGGTGTACGAC+TGG 0.605488 8_1:+19149780 None:intergenic
TCGCCGGAGAAGGAGAGGAG+TGG 0.605970 8_1:+19149997 None:intergenic
TTATTTGAATGGTAGGTATG+GGG 0.606640 8_1:-19149401 Msa1183760:CDS
AGTCGTACACCTCTCCGACC+CGG 0.609736 8_1:-19149778 Msa1183760:CDS
CGTCTCACAAATCTTCGAGA+AGG 0.610020 8_1:-19142519 Msa1183760:three_prime_UTR
CGTCTCACAAATCTTCGAGA+AGG 0.610020 8_1:-19145067 Msa1183760:three_prime_UTR
ACACCACCGCCGGGTCGGAG+AGG 0.612374 8_1:+19149769 None:intergenic
AAATCATCAATTCACCCCAT+CGG 0.617100 8_1:+19147929 None:intergenic
GACTGCGGTGGCGAGTGCAG+CGG 0.617812 8_1:-19149677 Msa1183760:CDS
AAGATGGGGATTGGATCCGA+CGG 0.619006 8_1:-19149575 Msa1183760:CDS
GAGACTTGAGGAATCAGGAT+CGG 0.620202 8_1:-19144240 Msa1183760:three_prime_UTR
GAGTGTATAAAGAAGTTACT+AGG 0.621779 8_1:-19144727 Msa1183760:three_prime_UTR
GAGTGCATAAAGAAGTTACC+AGG 0.624246 8_1:-19142179 Msa1183760:three_prime_UTR
GAGGCTTGCGATTTCGACTG+CGG 0.627957 8_1:-19149692 Msa1183760:CDS
AAGGGAGCAGAGAAGAACCA+AGG 0.628760 8_1:-19144830 Msa1183760:three_prime_UTR
GATAGTGAACAAGATGATGA+TGG 0.628999 8_1:-19149379 Msa1183760:CDS
GATTGTTCTTACTCCTGATG+CGG 0.629523 8_1:-19149428 Msa1183760:CDS
CACACCTTATGGCTCTAGAG+AGG 0.632619 8_1:-19144356 Msa1183760:three_prime_UTR
GTTCTACTAGCTTCCAGCAG+AGG 0.634387 8_1:-19142748 Msa1183760:intron
AGAAGGAAGAGGCAAAACAG+AGG 0.635083 8_1:-19145194 Msa1183760:three_prime_UTR
TCAGTTGCCTGATTTGAGTG+TGG 0.638515 8_1:-19142438 Msa1183760:three_prime_UTR
CCATAACCATTAATACCGCT+AGG 0.640803 8_1:+19144394 None:intergenic
AGAGGCAAATAAGGTTGATG+AGG 0.644395 8_1:-19142336 Msa1183760:three_prime_UTR
AGAGGAAAATAAGGTTGATG+AGG 0.644395 8_1:-19144884 Msa1183760:three_prime_UTR
AGAAGTCTATCGAAATTCTG+AGG 0.644859 8_1:+19145141 None:intergenic
TCAGTGTCACGATCCTGATG+AGG 0.650679 8_1:-19144704 Msa1183760:three_prime_UTR
ATGCAGAAGAGGCAAAGCAG+AGG 0.651073 8_1:-19142646 Msa1183760:three_prime_UTR
AATGCCAGGAGGAATTTGAG+AGG 0.653051 8_1:-19144924 Msa1183760:three_prime_UTR
GGCCCTTGCGACTGAGCGTG+AGG 0.653135 8_1:+19144190 None:intergenic
ATCATCTGTAAGAGAGACTG+AGG 0.654041 8_1:+19142710 None:intergenic
GCGTGAGGTGGAAGGAGATG+CGG 0.654440 8_1:+19149942 None:intergenic
GCTTGCGATTTCGACTGCGG+TGG 0.656264 8_1:-19149689 Msa1183760:CDS
GTATTATTTGATGATCCACA+AGG 0.660379 8_1:-19145223 Msa1183760:exon
ATTGCAGCGATGAAAAGATG+GGG 0.662449 8_1:-19149589 Msa1183760:CDS
TCAGTGTCAGGATCCTGATG+AGG 0.665443 8_1:-19142156 Msa1183760:three_prime_UTR
TTGATGAAAAGGTGCCAAAG+GGG 0.667305 8_1:-19141935 Msa1183760:three_prime_UTR
AGCGGTGAATACGGTTGTGG+TGG 0.668130 8_1:-19149659 Msa1183760:CDS
TGAGGGGAATGCGAAGACGA+AGG 0.671267 8_1:-19149617 Msa1183760:CDS
TGCCAGGAGGAATTTGAGAG+GGG 0.673299 8_1:-19144922 Msa1183760:three_prime_UTR
TGCCAGGAGGAATTTGAGAG+CGG 0.683022 8_1:-19142374 Msa1183760:three_prime_UTR
ATTATTAAACAAATGCCAGG+AGG 0.684132 8_1:-19142387 Msa1183760:three_prime_UTR
TCTACTAGCTTCCAGCAGAG+GGG 0.686885 8_1:-19142746 Msa1183760:intron
AATAAGGTTGATGAGGCCGA+GGG 0.692298 8_1:-19142329 Msa1183760:three_prime_UTR
AATAAGGTTGATGAGGCCGA+GGG 0.692298 8_1:-19144877 Msa1183760:three_prime_UTR
CATGCTGATGAGTATTATTG+GGG 0.703205 8_1:-19144662 Msa1183760:three_prime_UTR
GACAACGCAATCACTCTCAG+TGG 0.707177 8_1:-19142545 Msa1183760:three_prime_UTR
TCTCTTACAGATGATGCACA+AGG 0.717352 8_1:-19142702 Msa1183760:three_prime_UTR
TGGTCCAAAGAAGATTGAGG+AGG 0.721298 8_1:-19144479 Msa1183760:three_prime_UTR
ACTATGGCAACAGAGACTTG+AGG 0.726786 8_1:-19144252 Msa1183760:three_prime_UTR
ATTAGTAAACAAATGCCAGG+AGG 0.728711 8_1:-19144935 Msa1183760:three_prime_UTR
GACAACGCGATCACTCTCAG+TGG 0.748182 8_1:-19145093 Msa1183760:three_prime_UTR
CGTACACCTCTCCGACCCGG+CGG 0.776483 8_1:-19149775 Msa1183760:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TCATAGATTTTTTTAAATAT+TGG - chr8_1:19143174-19143193 Msa1183760:intron 10.0%
!!! CATAGATTTTTTTAAATATT+GGG - chr8_1:19143175-19143194 Msa1183760:intron 10.0%
!!! AATTTTGTTTTAACTAAATT+AGG + chr8_1:19144785-19144804 None:intergenic 10.0%
!! TATAAATTTCATATTAAAGA+TGG + chr8_1:19144975-19144994 None:intergenic 10.0%
!! ATCTTTAATATGAAATTTAT+AGG - chr8_1:19144974-19144993 Msa1183760:three_prime_UTR 10.0%
!!! TAATTGCTTTAAAAAAAAAA+AGG + chr8_1:19145125-19145144 None:intergenic 10.0%
!! AAGAAAAAAATATAAAAGTT+GGG - chr8_1:19145524-19145543 Msa1183760:intron 10.0%
!!! AGTCTTTAAATAATATTTTT+AGG + chr8_1:19146203-19146222 None:intergenic 10.0%
!! TTTAAAAAAATCTATGACTA+TGG + chr8_1:19143171-19143190 None:intergenic 15.0%
!!! AATTGATTCAAAAAATTACT+AGG + chr8_1:19144287-19144306 None:intergenic 15.0%
!!! ATACTACTATTTTTGTTTAA+AGG + chr8_1:19145346-19145365 None:intergenic 15.0%
!! GAAGAAAAAAATATAAAAGT+TGG - chr8_1:19145523-19145542 Msa1183760:intron 15.0%
!!! ATGTATTAATCGATTTTTAT+GGG + chr8_1:19145758-19145777 None:intergenic 15.0%
!!! AATGTATTAATCGATTTTTA+TGG + chr8_1:19145759-19145778 None:intergenic 15.0%
!!! TTTTAAAATAAATGTCTCTT+TGG + chr8_1:19146049-19146068 None:intergenic 15.0%
!!! AGTTTTCTTTTAATCTTTTT+TGG + chr8_1:19146389-19146408 None:intergenic 15.0%
!!! ACGAAAAGATAAATTTTAAA+AGG - chr8_1:19147046-19147065 Msa1183760:intron 15.0%
!! TAATCCTAAATGAAATAAAA+TGG + chr8_1:19148009-19148028 None:intergenic 15.0%
!!! ATTTTATTTCATTTAGGATT+AGG - chr8_1:19148008-19148027 Msa1183760:intron 15.0%
!!! ATTAGGATTTTATCATTATT+AGG - chr8_1:19148025-19148044 Msa1183760:intron 15.0%
!!! GTTTTATTTGCTTTTTATTT+TGG - chr8_1:19148197-19148216 Msa1183760:intron 15.0%
!!! TTTAATTAGTTGTTTGATTT+TGG - chr8_1:19148236-19148255 Msa1183760:intron 15.0%
!!! TTAATTAGTTGTTTGATTTT+GGG - chr8_1:19148237-19148256 Msa1183760:intron 15.0%
!!! CTATTTTTGTTTAAACAATA+GGG + chr8_1:19148299-19148318 None:intergenic 15.0%
!! GGAATTAATCATATTATTAA+AGG + chr8_1:19148354-19148373 None:intergenic 15.0%
!! TGTGAATTTGAATTTGAATT+TGG + chr8_1:19141946-19141965 None:intergenic 20.0%
!! GAGTATTAAGATTAATAAGA+AGG - chr8_1:19142287-19142306 Msa1183760:three_prime_UTR 20.0%
!! AAATTTGGATGATACAATTT+AGG - chr8_1:19142954-19142973 Msa1183760:intron 20.0%
!!! ATGACTATGGTTTTAAATAA+AGG + chr8_1:19143158-19143177 None:intergenic 20.0%
!!! GGATAAATTTTTATTGAACA+TGG - chr8_1:19143225-19143244 Msa1183760:intron 20.0%
!! TTATAAGTAGTTCACTTATT+TGG - chr8_1:19143642-19143661 Msa1183760:intron 20.0%
!!! TAGTAGTATTTTTGTTGTTT+TGG - chr8_1:19145357-19145376 Msa1183760:intron 20.0%
!! AGTTCAGTGTAAAAATAAAA+TGG - chr8_1:19145428-19145447 Msa1183760:intron 20.0%
!! GTTCAGTGTAAAAATAAAAT+GGG - chr8_1:19145429-19145448 Msa1183760:intron 20.0%
!! TGAAAAAAAGAAAAAGTTAG+CGG - chr8_1:19145494-19145513 Msa1183760:intron 20.0%
!! AAAAAAATATAAAAGTTGGG+TGG - chr8_1:19145527-19145546 Msa1183760:intron 20.0%
!! AGGAAAAAAAGAATATAGAT+GGG + chr8_1:19145634-19145653 None:intergenic 20.0%
!! AAGGAAAAAAAGAATATAGA+TGG + chr8_1:19145635-19145654 None:intergenic 20.0%
!!! TGTATTAATCGATTTTTATG+GGG + chr8_1:19145757-19145776 None:intergenic 20.0%
!!! TTAAAATGAGTAACGTTTTA+AGG - chr8_1:19145818-19145837 Msa1183760:intron 20.0%
!!! AAGTAATATTCTACTTTTGT+GGG + chr8_1:19145931-19145950 None:intergenic 20.0%
!!! AAAGTAATATTCTACTTTTG+TGG + chr8_1:19145932-19145951 None:intergenic 20.0%
!! ACAAAAGTAGAATATTACTT+TGG - chr8_1:19145931-19145950 Msa1183760:intron 20.0%
!!! TTTAACTTTTTATCTTCTAC+TGG + chr8_1:19146432-19146451 None:intergenic 20.0%
!! GAAGACAAAAATAAGATTAA+AGG + chr8_1:19146604-19146623 None:intergenic 20.0%
!! TTTGAATAATATGCTAGAAA+TGG - chr8_1:19146723-19146742 Msa1183760:intron 20.0%
!!! TTATGGATGTATATTTTGAA+AGG - chr8_1:19147397-19147416 Msa1183760:intron 20.0%
!!! ACAACATGAATTTATCTTTT+AGG - chr8_1:19147436-19147455 Msa1183760:intron 20.0%
!!! CAACATGAATTTATCTTTTA+GGG - chr8_1:19147437-19147456 Msa1183760:intron 20.0%
!!! CTAACCATTTTATTTCATTT+AGG - chr8_1:19148002-19148021 Msa1183760:intron 20.0%
!! AAAGAATGAAACATCATAAT+TGG + chr8_1:19148091-19148110 None:intergenic 20.0%
!! AAAGAATGAAACATCATAAT+TGG + chr8_1:19148091-19148110 None:intergenic 20.0%
!!! TAATTAGTTGTTTGATTTTG+GGG - chr8_1:19148238-19148257 Msa1183760:intron 20.0%
!! TTAAACAATAGGGTTATAAA+AGG + chr8_1:19148289-19148308 None:intergenic 20.0%
!!! CCTATTTTTGTTTAAACAAT+AGG + chr8_1:19148300-19148319 None:intergenic 20.0%
!! CCTATTGTTTAAACAAAAAT+AGG - chr8_1:19148297-19148316 Msa1183760:intron 20.0%
!!! TTTGCTTACTGTTTTATAAA+AGG + chr8_1:19148681-19148700 None:intergenic 20.0%
!!! AAAACAGTAAGCAAATTTTA+AGG - chr8_1:19148686-19148705 Msa1183760:intron 20.0%
!! CTATTCTATTGATATTCATA+AGG + chr8_1:19148789-19148808 None:intergenic 20.0%
!! GAATATCAATAGAATAGTAA+TGG - chr8_1:19148792-19148811 Msa1183760:intron 20.0%
!! ACGAAAAGATAACATTTAAA+AGG - chr8_1:19149594-19149613 Msa1183760:CDS 20.0%
!! TCAAGAAACATCATATTTAT+TGG - chr8_1:19149761-19149780 Msa1183760:CDS 20.0%
!!! TTTGGAGTGAATTTGATTTT+GGG + chr8_1:19141928-19141947 None:intergenic 25.0%
!!! ATTTGGAGTGAATTTGATTT+TGG + chr8_1:19141929-19141948 None:intergenic 25.0%
! ATTATTTGAATGGTAGGTAT+GGG - chr8_1:19142604-19142623 Msa1183760:three_prime_UTR 25.0%
!! TTGATAACTGTTGTCAAATT+TGG - chr8_1:19142939-19142958 Msa1183760:intron 25.0%
! ACTTTAGATAAGAGTTAGTT+TGG - chr8_1:19143204-19143223 Msa1183760:intron 25.0%
! CGTAGAAATCAATTCAAATT+TGG - chr8_1:19143444-19143463 Msa1183760:intron 25.0%
!! ATATTTGAAATGTTTCCTTG+AGG - chr8_1:19143479-19143498 Msa1183760:intron 25.0%
!!! ATTTGCTTTAAGTTGCTAAA+TGG - chr8_1:19143517-19143536 Msa1183760:intron 25.0%
! GTTAACATTCTGAATAATGA+AGG - chr8_1:19143548-19143567 Msa1183760:intron 25.0%
!! TTATTTGGAGTCATTAACTA+TGG - chr8_1:19143657-19143676 Msa1183760:intron 25.0%
!!! TTTTGAGTTGCTTATTATTG+TGG - chr8_1:19143963-19143982 Msa1183760:intron 25.0%
! AATATAATAGGTTTCTGACT+TGG - chr8_1:19144009-19144028 Msa1183760:intron 25.0%
!! ATGATTTAAAGTTGTTTGCA+CGG - chr8_1:19144093-19144112 Msa1183760:intron 25.0%
!! TGTATCGTATCATTTTATAG+AGG - chr8_1:19144117-19144136 Msa1183760:three_prime_UTR 25.0%
! ATGGAAAAAAGCAAATACAT+TGG + chr8_1:19144187-19144206 None:intergenic 25.0%
! CTTAACGATTAAAACTACTT+TGG - chr8_1:19144504-19144523 Msa1183760:three_prime_UTR 25.0%
! ACATCAATTTCAAAAGTGAA+GGG + chr8_1:19144548-19144567 None:intergenic 25.0%
! CATCATCATAAATGATAACA+TGG + chr8_1:19144866-19144885 None:intergenic 25.0%
! CATGTTATCATTTATGATGA+TGG - chr8_1:19144864-19144883 Msa1183760:three_prime_UTR 25.0%
!!! TTTAACTTTTAGGCTTTGTT+TGG - chr8_1:19145172-19145191 Msa1183760:three_prime_UTR 25.0%
! TTGTTTGATACAAAAGAAAG+TGG - chr8_1:19145273-19145292 Msa1183760:intron 25.0%
! TTGAAGGAATGAAAAACATA+TGG - chr8_1:19145305-19145324 Msa1183760:intron 25.0%
! CTATAACAAAGAAGTTAAGA+GGG - chr8_1:19145463-19145482 Msa1183760:intron 25.0%
! TATAACAAAGAAGTTAAGAG+GGG - chr8_1:19145464-19145483 Msa1183760:intron 25.0%
! GACTTTATACATTGAAAAAG+TGG - chr8_1:19146110-19146129 Msa1183760:intron 25.0%
! ATTAAAGGTAACAACTTACA+TGG + chr8_1:19146589-19146608 None:intergenic 25.0%
! TAGAGACATAATAAAACTTC+AGG + chr8_1:19146655-19146674 None:intergenic 25.0%
!! TTTTGTGTTGTCTATCTTTT+CGG - chr8_1:19147926-19147945 Msa1183760:intron 25.0%
!!! AATTAGTTGTTTGATTTTGG+GGG - chr8_1:19148239-19148258 Msa1183760:intron 25.0%
! GGTTATAAAAGGAAATAAAG+TGG + chr8_1:19148278-19148297 None:intergenic 25.0%
!! TAGATTAACTTTTAGTGATC+AGG - chr8_1:19148489-19148508 Msa1183760:intron 25.0%
!! AGATTAACTTTTAGTGATCA+GGG - chr8_1:19148490-19148509 Msa1183760:intron 25.0%
! ATCAATAGAATAGTAATGGT+TGG - chr8_1:19148796-19148815 Msa1183760:intron 25.0%
! TAGTTACTATCTATTATGCA+CGG - chr8_1:19148971-19148990 Msa1183760:intron 25.0%
! ATAATGACTCCATCATTTAA+CGG - chr8_1:19149146-19149165 Msa1183760:intron 25.0%
! GTTATTATTAAACAAATGCC+AGG - chr8_1:19149616-19149635 Msa1183760:CDS 25.0%
!!! GTATGGATGTATATTTTGAA+AGG - chr8_1:19149945-19149964 Msa1183760:CDS 25.0%
! ACAACATGAATTTATCTTCT+AGG - chr8_1:19149984-19150003 Msa1183760:CDS 25.0%
! CAACATGAATTTATCTTCTA+GGG - chr8_1:19149985-19150004 Msa1183760:CDS 25.0%
AAAGAAAGAGAAGTTGAAGT+GGG + chr8_1:19141871-19141890 None:intergenic 30.0%
AGATTAATAAGAAGGAGAAG+AGG - chr8_1:19142295-19142314 Msa1183760:three_prime_UTR 30.0%
!!! GAAAGTGACGTTTTTTATGA+TGG - chr8_1:19142455-19142474 Msa1183760:three_prime_UTR 30.0%
GATTATTTGAATGGTAGGTA+TGG - chr8_1:19142603-19142622 Msa1183760:three_prime_UTR 30.0%
TTATTTGAATGGTAGGTATG+GGG - chr8_1:19142605-19142624 Msa1183760:three_prime_UTR 30.0%
GAAGTAATAGTTGTAGAAGA+TGG - chr8_1:19142663-19142682 Msa1183760:three_prime_UTR 30.0%
TTAAATTGAAGTCGCTGTTA+TGG - chr8_1:19142895-19142914 Msa1183760:intron 30.0%
! TTTTAAATAGTGGTCACAAC+AGG - chr8_1:19143032-19143051 Msa1183760:intron 30.0%
TTTAAATAGTGGTCACAACA+GGG - chr8_1:19143033-19143052 Msa1183760:intron 30.0%
AATTAGATGATCATGAGACA+TGG + chr8_1:19143328-19143347 None:intergenic 30.0%
! TTGAATTGATTTCTACGTCA+AGG + chr8_1:19143441-19143460 None:intergenic 30.0%
! TTGAATTGATTTCTACCTCA+AGG + chr8_1:19143497-19143516 None:intergenic 30.0%
!! TGTGTAGTCTTATTTGTAAC+TGG - chr8_1:19143732-19143751 Msa1183760:intron 30.0%
AAAATGAGTCAGTGAGATTT+AGG + chr8_1:19143853-19143872 None:intergenic 30.0%
ATGGGTCTGAGTAATATAAT+AGG - chr8_1:19143997-19144016 Msa1183760:intron 30.0%
TGAATTTGGATTCTAAGTGA+TGG + chr8_1:19144211-19144230 None:intergenic 30.0%
CATCAATTTCAAAAGTGAAG+GGG + chr8_1:19144547-19144566 None:intergenic 30.0%
GACATCAATTTCAAAAGTGA+AGG + chr8_1:19144549-19144568 None:intergenic 30.0%
!! AAATTGATGTCTGCTGATTT+AGG - chr8_1:19144558-19144577 Msa1183760:three_prime_UTR 30.0%
!! AATTGATGTCTGCTGATTTA+GGG - chr8_1:19144559-19144578 Msa1183760:three_prime_UTR 30.0%
AAGTGTAAAACATGGTTGAA+TGG + chr8_1:19144675-19144694 None:intergenic 30.0%
! CCTTTTCAAAGTGTAAAACA+TGG + chr8_1:19144683-19144702 None:intergenic 30.0%
!! CCATGTTTTACACTTTGAAA+AGG - chr8_1:19144680-19144699 Msa1183760:three_prime_UTR 30.0%
CTCTTCTTCTAACTTACAAA+TGG + chr8_1:19144709-19144728 None:intergenic 30.0%
ATTGTTTACGTGATAAACAC+TGG - chr8_1:19144945-19144964 Msa1183760:three_prime_UTR 30.0%
AAAGCCTAAAAGTTAAAGTG+GGG + chr8_1:19145169-19145188 None:intergenic 30.0%
CAAAGCCTAAAAGTTAAAGT+GGG + chr8_1:19145170-19145189 None:intergenic 30.0%
ACAAAGCCTAAAAGTTAAAG+TGG + chr8_1:19145171-19145190 None:intergenic 30.0%
ATCTTTCCTTTCACTTTCTT+TGG + chr8_1:19145202-19145221 None:intergenic 30.0%
AAAGTGGAATAGAAAGTTGA+AGG - chr8_1:19145289-19145308 Msa1183760:intron 30.0%
! CCTCTTAACTTCTTTGTTAT+AGG + chr8_1:19145465-19145484 None:intergenic 30.0%
CCTATAACAAAGAAGTTAAG+AGG - chr8_1:19145462-19145481 Msa1183760:intron 30.0%
ATAACAAAGAAGTTAAGAGG+GGG - chr8_1:19145465-19145484 Msa1183760:intron 30.0%
AAGAAAGACTTTCAGTTGTT+TGG + chr8_1:19145675-19145694 None:intergenic 30.0%
ATTGTGATATGGAAAGAAAG+GGG + chr8_1:19145703-19145722 None:intergenic 30.0%
GATTGTGATATGGAAAGAAA+GGG + chr8_1:19145704-19145723 None:intergenic 30.0%
AGATTGTGATATGGAAAGAA+AGG + chr8_1:19145705-19145724 None:intergenic 30.0%
TCAAAGGAAAGATTGTGATA+TGG + chr8_1:19145714-19145733 None:intergenic 30.0%
TAAGGCTATGTTTGTTTCAA+AGG + chr8_1:19145730-19145749 None:intergenic 30.0%
! TTTGAAACAAACATAGCCTT+AGG - chr8_1:19145729-19145748 Msa1183760:intron 30.0%
AAAGGGGTAGTTTAGTAAAA+TGG + chr8_1:19145893-19145912 None:intergenic 30.0%
AAACTACCCCTTTAAACTAT+TGG - chr8_1:19145900-19145919 Msa1183760:intron 30.0%
GAAACACCAATAGTTTAAAG+GGG + chr8_1:19145909-19145928 None:intergenic 30.0%
GGAAACACCAATAGTTTAAA+GGG + chr8_1:19145910-19145929 None:intergenic 30.0%
ATACATTGAAAAAGTGGATC+AGG - chr8_1:19146116-19146135 Msa1183760:intron 30.0%
TTGCAATAAAATCCAAAGGT+CGG + chr8_1:19146166-19146185 None:intergenic 30.0%
GCATTTGCAATAAAATCCAA+AGG + chr8_1:19146170-19146189 None:intergenic 30.0%
ATGTCTAAGAGCAATCTTTA+AGG + chr8_1:19146320-19146339 None:intergenic 30.0%
! ACTTTTTATCTTCTACTGGA+TGG + chr8_1:19146428-19146447 None:intergenic 30.0%
TAAAAAGTTAAAGCTGCTGT+AGG - chr8_1:19146440-19146459 Msa1183760:intron 30.0%
! GTATTATTTGATGATCCACA+AGG - chr8_1:19146783-19146802 Msa1183760:intron 30.0%
GTTATTAGTAAACAAATGCC+AGG - chr8_1:19147068-19147087 Msa1183760:intron 30.0%
AGAACAAGAAGAGGAAAATA+AGG - chr8_1:19147113-19147132 Msa1183760:intron 30.0%
TTAGGAAACATCAGATTGAT+TGG - chr8_1:19147213-19147232 Msa1183760:intron 30.0%
GAGTGTATAAAGAAGTTACT+AGG - chr8_1:19147279-19147298 Msa1183760:intron 30.0%
! TCCATAAGTTTCTTAGCTTT+GGG + chr8_1:19147384-19147403 None:intergenic 30.0%
ATCCATAAGTTTCTTAGCTT+TGG + chr8_1:19147385-19147404 None:intergenic 30.0%
!!! TGAATTTATCTTTTAGGGTG+AGG - chr8_1:19147442-19147461 Msa1183760:intron 30.0%
!! AGGATGTAATTGATTTGAGA+AGG - chr8_1:19147475-19147494 Msa1183760:intron 30.0%
! TTGATTTGAGAAGGAATAGA+TGG - chr8_1:19147484-19147503 Msa1183760:intron 30.0%
CCATAGTTTATATTATGAGC+TGG + chr8_1:19147741-19147760 None:intergenic 30.0%
CCAGCTCATAATATAAACTA+TGG - chr8_1:19147738-19147757 Msa1183760:intron 30.0%
!! ATTAGTTGTTTGATTTTGGG+GGG - chr8_1:19148240-19148259 Msa1183760:intron 30.0%
ATTCATAAGGTAACAAGCAA+GGG + chr8_1:19148776-19148795 None:intergenic 30.0%
TATTCATAAGGTAACAAGCA+AGG + chr8_1:19148777-19148796 None:intergenic 30.0%
AAACCATAACCGTTAAATGA+TGG + chr8_1:19149158-19149177 None:intergenic 30.0%
ATCCAGAAATTTCAGAAAGT+GGG + chr8_1:19149221-19149240 None:intergenic 30.0%
! GTTGAGAAGAAGTACAAAAT+AGG - chr8_1:19149326-19149345 Msa1183760:intron 30.0%
TAACTCCTCAGAATTTCAAT+AGG - chr8_1:19149408-19149427 Msa1183760:CDS 30.0%
ATTATTAAACAAATGCCAGG+AGG - chr8_1:19149619-19149638 Msa1183760:CDS 30.0%
TGCAAACTTATGAGTTCTAT+TGG - chr8_1:19149890-19149909 Msa1183760:intron 30.0%
GCAAACTTATGAGTTCTATT+GGG - chr8_1:19149891-19149910 Msa1183760:intron 30.0%
CAAACTTATGAGTTCTATTG+GGG - chr8_1:19149892-19149911 Msa1183760:intron 30.0%
!! AGGATGTAATTGATTTGAGA+AGG - chr8_1:19147475-19147494 Msa1183760:intron 30.0%
! TTGATTTGAGAAGGAATAGA+TGG - chr8_1:19147484-19147503 Msa1183760:intron 30.0%
TTATTACGGCGATGAAAATT+TGG - chr8_1:19150095-19150114 Msa1183760:CDS 30.0%
TATTACGGCGATGAAAATTT+GGG - chr8_1:19150096-19150115 Msa1183760:CDS 30.0%
!!! GAAAGTGACCTTTTTTATGA+TGG - chr8_1:19150135-19150154 Msa1183760:CDS 30.0%
GAAAGAAAGAGAAGTTGAAG+TGG + chr8_1:19141872-19141891 None:intergenic 35.0%
ATCTTAATACTCCAATCCCT+TGG + chr8_1:19142279-19142298 None:intergenic 35.0%
TTATTGCAGCGATGAAAAGA+TGG - chr8_1:19142415-19142434 Msa1183760:three_prime_UTR 35.0%
TATTGCAGCGATGAAAAGAT+GGG - chr8_1:19142416-19142435 Msa1183760:three_prime_UTR 35.0%
!!! AGTGACGTTTTTTATGATGG+AGG - chr8_1:19142458-19142477 Msa1183760:three_prime_UTR 35.0%
!!! GTTTTTTATGATGGAGGTGA+AGG - chr8_1:19142464-19142483 Msa1183760:three_prime_UTR 35.0%
! TTGTTGGCTAGTAGGAATAT+TGG - chr8_1:19142495-19142514 Msa1183760:three_prime_UTR 35.0%
! TGTTGGCTAGTAGGAATATT+GGG - chr8_1:19142496-19142515 Msa1183760:three_prime_UTR 35.0%
TCATACAAATTCAACGTCCT+CGG + chr8_1:19142540-19142559 None:intergenic 35.0%
GATAGTGAACAAGATGATGA+TGG - chr8_1:19142627-19142646 Msa1183760:three_prime_UTR 35.0%
!!! GGAGTAAGGGTTTTAAATAG+TGG - chr8_1:19143022-19143041 Msa1183760:intron 35.0%
AACAGGGATTCTTGATATTG+CGG - chr8_1:19143049-19143068 Msa1183760:intron 35.0%
ACAAGCTACTATAATGCTTC+AGG + chr8_1:19143367-19143386 None:intergenic 35.0%
TGTGTATTGGACATTCATGT+TGG - chr8_1:19143901-19143920 Msa1183760:intron 35.0%
AGCAACTCAAAAGTTACAGA+GGG + chr8_1:19143955-19143974 None:intergenic 35.0%
AAGCAACTCAAAAGTTACAG+AGG + chr8_1:19143956-19143975 None:intergenic 35.0%
TATTGTGGAAGAGCTTAAGA+TGG - chr8_1:19143978-19143997 Msa1183760:intron 35.0%
ATTGTGGAAGAGCTTAAGAT+GGG - chr8_1:19143979-19143998 Msa1183760:intron 35.0%
! CTTGGTTGCTTTCTTCTATT+TGG - chr8_1:19144027-19144046 Msa1183760:intron 35.0%
GCTTTCTTCTATTTGGATAC+AGG - chr8_1:19144034-19144053 Msa1183760:intron 35.0%
AAATCATCAATTCACCCCAT+CGG + chr8_1:19144080-19144099 None:intergenic 35.0%
ATAGAGGATATTGCTCATAC+CGG - chr8_1:19144133-19144152 Msa1183760:three_prime_UTR 35.0%
! TTGGATTCTAAGTGATGGAA+TGG + chr8_1:19144206-19144225 None:intergenic 35.0%
! CCTTACATGCTACTTGAATT+TGG + chr8_1:19144225-19144244 None:intergenic 35.0%
CCAAATTCAAGTAGCATGTA+AGG - chr8_1:19144222-19144241 Msa1183760:three_prime_UTR 35.0%
TTTGTGCAGATGCATGTAAA+TGG - chr8_1:19144326-19144345 Msa1183760:three_prime_UTR 35.0%
ATACAACTTCTTCAGAAGGA+AGG + chr8_1:19144392-19144411 None:intergenic 35.0%
CTTGTACTGCTTCTACTTAA+TGG - chr8_1:19144427-19144446 Msa1183760:three_prime_UTR 35.0%
! TGATTTAGGGACTCAACTTT+TGG - chr8_1:19144572-19144591 Msa1183760:three_prime_UTR 35.0%
GCAGTAAAGTCATTCAAAAG+AGG + chr8_1:19144633-19144652 None:intergenic 35.0%
!! TGGAAAGACTTTGAGGTATA+TGG + chr8_1:19144655-19144674 None:intergenic 35.0%
! TTTCTTGTTTGCTTGACGAA+TGG - chr8_1:19145022-19145041 Msa1183760:three_prime_UTR 35.0%
! TTCTTGTTTGCTTGACGAAT+GGG - chr8_1:19145023-19145042 Msa1183760:three_prime_UTR 35.0%
!! TTGACCCCACTTTAACTTTT+AGG - chr8_1:19145162-19145181 Msa1183760:three_prime_UTR 35.0%
GTGAAAGGAAAGATTGAGAA+AGG - chr8_1:19145208-19145227 Msa1183760:three_prime_UTR 35.0%
AAGGAAAGATTGAGAAAGGA+AGG - chr8_1:19145212-19145231 Msa1183760:three_prime_UTR 35.0%
GAGAAAGGAAGGATTGTTTA+AGG - chr8_1:19145223-19145242 Msa1183760:exon 35.0%
GGAACTCTACATAAAGATGA+AGG + chr8_1:19145654-19145673 None:intergenic 35.0%
TTGTGATATGGAAAGAAAGG+GGG + chr8_1:19145702-19145721 None:intergenic 35.0%
GGGAAACACCAATAGTTTAA+AGG + chr8_1:19145911-19145930 None:intergenic 35.0%
GTGTACGCAACATTAAATAG+AGG - chr8_1:19145959-19145978 Msa1183760:intron 35.0%
ATCAGGACTACTAGATGATT+TGG - chr8_1:19146133-19146152 Msa1183760:intron 35.0%
!! TTTGGATTTTAACCGACCTT+TGG - chr8_1:19146151-19146170 Msa1183760:intron 35.0%
CAATCATCAACTTGAAGTCT+TGG - chr8_1:19146510-19146529 Msa1183760:intron 35.0%
AGAAGTCTATCGAAATTCTG+AGG + chr8_1:19146868-19146887 None:intergenic 35.0%
ATTAGTAAACAAATGCCAGG+AGG - chr8_1:19147071-19147090 Msa1183760:intron 35.0%
!! AGAGGAAAATAAGGTTGATG+AGG - chr8_1:19147122-19147141 Msa1183760:intron 35.0%
TCAAGCTGTCAAATGAAGAA+AGG - chr8_1:19147157-19147176 Msa1183760:intron 35.0%
CAAGCTGTCAAATGAAGAAA+GGG - chr8_1:19147158-19147177 Msa1183760:intron 35.0%
AGAAGAAAATGTTGACAGAG+AGG - chr8_1:19147247-19147266 Msa1183760:intron 35.0%
TGCATGCTGATGAGTATTAT+TGG - chr8_1:19147342-19147361 Msa1183760:intron 35.0%
GCATGCTGATGAGTATTATT+GGG - chr8_1:19147343-19147362 Msa1183760:intron 35.0%
CATGCTGATGAGTATTATTG+GGG - chr8_1:19147344-19147363 Msa1183760:intron 35.0%
!! TAAGTTTCTTAGCTTTGGGA+TGG + chr8_1:19147380-19147399 None:intergenic 35.0%
TCCCAAAGCTAAGAAACTTA+TGG - chr8_1:19147380-19147399 Msa1183760:intron 35.0%
CTTAAATGATCATATCCAGC+TGG + chr8_1:19147714-19147733 None:intergenic 35.0%
!! GAAGCATTTTGAGAGACAAT+TGG + chr8_1:19147840-19147859 None:intergenic 35.0%
! GTTTCATTCTTTTCTCGATC+AGG - chr8_1:19148099-19148118 Msa1183760:intron 35.0%
! AAACGAGACTTTTAGTGATC+AGG - chr8_1:19148430-19148449 Msa1183760:intron 35.0%
! AACGAGACTTTTAGTGATCA+GGG - chr8_1:19148431-19148450 Msa1183760:intron 35.0%
! GTAACATTGGTTATTCGCAT+TGG - chr8_1:19148457-19148476 Msa1183760:intron 35.0%
ACATGTTAAGCAACCCAAAA+AGG - chr8_1:19148532-19148551 Msa1183760:intron 35.0%
CATGTTAAGCAACCCAAAAA+GGG - chr8_1:19148533-19148552 Msa1183760:intron 35.0%
! AATGCTAAGTTGCCCTTTTT+GGG + chr8_1:19148548-19148567 None:intergenic 35.0%
TTGTTACATTGTGTAGCTGT+TGG - chr8_1:19148913-19148932 Msa1183760:intron 35.0%
TGTTACATTGTGTAGCTGTT+GGG - chr8_1:19148914-19148933 Msa1183760:intron 35.0%
ACTCCATCATTTAACGGTTA+TGG - chr8_1:19149152-19149171 Msa1183760:intron 35.0%
TCCAGAAATTTCAGAAAGTG+GGG + chr8_1:19149220-19149239 None:intergenic 35.0%
GATCCAGAAATTTCAGAAAG+TGG + chr8_1:19149222-19149241 None:intergenic 35.0%
! TAAAGTGTCAAATGCAGAAG+AGG - chr8_1:19149349-19149368 Msa1183760:CDS 35.0%
AGAAGCCTATTGAAATTCTG+AGG + chr8_1:19149416-19149435 None:intergenic 35.0%
TTTCAATAGGCTTCTTGAAC+AGG - chr8_1:19149421-19149440 Msa1183760:CDS 35.0%
GCATACATTTCACAGAAGAT+AGG + chr8_1:19149524-19149543 None:intergenic 35.0%
AGAACAAGAAGAGGCAAATA+AGG - chr8_1:19149661-19149680 Msa1183760:CDS 35.0%
TCAAGCTGTCAAATGAAGAA+AGG - chr8_1:19147157-19147176 Msa1183760:intron 35.0%
CAAGCTGTCAAATGAAGAAA+GGG - chr8_1:19147158-19147177 Msa1183760:intron 35.0%
AGAAGAAAATGTTGACAGAG+AGG - chr8_1:19147247-19147266 Msa1183760:intron 35.0%
!! TGAATTTATCTTCTAGGGTG+AGG - chr8_1:19149990-19150009 Msa1183760:CDS 35.0%
!! AAGGAGGAAAGTTGATGAAA+AGG - chr8_1:19150060-19150079 Msa1183760:CDS 35.0%
ATTACGGCGATGAAAATTTG+GGG - chr8_1:19150097-19150116 Msa1183760:CDS 35.0%
! AAAAAGGTCACTTTCTTCGT+CGG + chr8_1:19150130-19150149 None:intergenic 35.0%
!!! AGTGACCTTTTTTATGATGG+AGG - chr8_1:19150138-19150157 Msa1183760:CDS 35.0%
!! CCGGTTTTCTTTTGGTTGTA+GGG + chr8_1:19142189-19142208 None:intergenic 40.0%
CCCTACAACCAAAAGAAAAC+CGG - chr8_1:19142186-19142205 Msa1183760:three_prime_UTR 40.0%
ATACTCCAATCCCTTGGTTT+GGG + chr8_1:19142273-19142292 None:intergenic 40.0%
AATACTCCAATCCCTTGGTT+TGG + chr8_1:19142274-19142293 None:intergenic 40.0%
GAATTTGGGGATGAGTTTGA+GGG - chr8_1:19142372-19142391 Msa1183760:three_prime_UTR 40.0%
AATTTGGGGATGAGTTTGAG+GGG - chr8_1:19142373-19142392 Msa1183760:three_prime_UTR 40.0%
ATTGCAGCGATGAAAAGATG+GGG - chr8_1:19142417-19142436 Msa1183760:three_prime_UTR 40.0%
! AAAAACGTCACTTTCTCCGT+CGG + chr8_1:19142450-19142469 None:intergenic 40.0%
!! AGAAAGTGTTGTTGGCTAGT+AGG - chr8_1:19142487-19142506 Msa1183760:three_prime_UTR 40.0%
GATTGTTCTTACTCCTGATG+CGG - chr8_1:19142578-19142597 Msa1183760:three_prime_UTR 40.0%
TTCAAATAATCCACCGCATC+AGG + chr8_1:19142594-19142613 None:intergenic 40.0%
!! GATGCGGTGGATTATTTGAA+TGG - chr8_1:19142594-19142613 Msa1183760:three_prime_UTR 40.0%
!! CGGTGGATTATTTGAATGGT+AGG - chr8_1:19142598-19142617 Msa1183760:three_prime_UTR 40.0%
GTTGTAGAAGATGGTGAAGA+AGG - chr8_1:19142672-19142691 Msa1183760:three_prime_UTR 40.0%
ATGCCTTTCATAAGACGTGT+CGG - chr8_1:19142819-19142838 Msa1183760:intron 40.0%
GGCTATAGTCATAGACTCAT+AGG - chr8_1:19142858-19142877 Msa1183760:intron 40.0%
GGATGATACAATTTAGGTCC+CGG - chr8_1:19142960-19142979 Msa1183760:intron 40.0%
GTCCAAATTCGTACATTTCC+GGG + chr8_1:19142981-19143000 None:intergenic 40.0%
CGTCCAAATTCGTACATTTC+CGG + chr8_1:19142982-19143001 None:intergenic 40.0%
GTTGTGATCACAAATGTGGT+CGG - chr8_1:19143001-19143020 Msa1183760:intron 40.0%
!! ACTGGCTTTAGCCTTAACTT+TGG - chr8_1:19143750-19143769 Msa1183760:intron 40.0%
!! TTTAGCCTTAACTTTGGAGC+TGG - chr8_1:19143756-19143775 Msa1183760:intron 40.0%
AGATACCAGCTCCAAAGTTA+AGG + chr8_1:19143764-19143783 None:intergenic 40.0%
TTGTGCATGTGTGTGTGTAT+TGG - chr8_1:19143888-19143907 Msa1183760:intron 40.0%
!! TGGACATTCATGTTGGTAGT+TGG - chr8_1:19143908-19143927 Msa1183760:intron 40.0%
!! GGACATTCATGTTGGTAGTT+GGG - chr8_1:19143909-19143928 Msa1183760:intron 40.0%
GCAACTCAAAAGTTACAGAG+GGG + chr8_1:19143954-19143973 None:intergenic 40.0%
TAGAGGATATTGCTCATACC+GGG - chr8_1:19144134-19144153 Msa1183760:three_prime_UTR 40.0%
GACTTCAAACCTTCTATACC+CGG + chr8_1:19144155-19144174 None:intergenic 40.0%
CCAGATACAACTTCTTCAGA+AGG + chr8_1:19144396-19144415 None:intergenic 40.0%
! CCTTCTGAAGAAGTTGTATC+TGG - chr8_1:19144393-19144412 Msa1183760:three_prime_UTR 40.0%
GGTTGAATGGAAAGACTTTG+AGG + chr8_1:19144662-19144681 None:intergenic 40.0%
! ATGAAGCACTATGACACCAA+CGG + chr8_1:19144828-19144847 None:intergenic 40.0%
!! TTGGTGTCATAGTGCTTCAT+TGG - chr8_1:19144828-19144847 Msa1183760:three_prime_UTR 40.0%
GGATGACCAAAGAAAGTGAA+AGG - chr8_1:19145193-19145212 Msa1183760:three_prime_UTR 40.0%
AAACTTTCCCGACATAGGAA+CGG + chr8_1:19145599-19145618 None:intergenic 40.0%
TTGGAAAACTTTCCCGACAT+AGG + chr8_1:19145604-19145623 None:intergenic 40.0%
GTCTTGGAGATCATACTTGA+AGG - chr8_1:19146526-19146545 Msa1183760:intron 40.0%
CTCTACACTTGTGCTTGTAT+TGG - chr8_1:19146670-19146689 Msa1183760:intron 40.0%
GCATACACTTCACAGAAGAT+AGG + chr8_1:19146976-19146995 None:intergenic 40.0%
TAGGGTGAGGTTTATGTTGA+AGG - chr8_1:19147455-19147474 Msa1183760:intron 40.0%
GAAGGAATAGATGGCAAGTA+AGG - chr8_1:19147493-19147512 Msa1183760:intron 40.0%
CAAGTAAGGAGGAAAGTTGA+TGG - chr8_1:19147507-19147526 Msa1183760:intron 40.0%
TGATGGTCCAAAGAAGATTG+AGG - chr8_1:19147524-19147543 Msa1183760:intron 40.0%
TGTACCTCCTCAATCTTCTT+TGG + chr8_1:19147534-19147553 None:intergenic 40.0%
ACAGAGATGTTATGCAAGAG+AGG - chr8_1:19147553-19147572 Msa1183760:intron 40.0%
TTTGGTCCTAGCGGTATTAA+TGG - chr8_1:19147606-19147625 Msa1183760:intron 40.0%
CCATAACCATTAATACCGCT+AGG + chr8_1:19147615-19147634 None:intergenic 40.0%
CCTAGCGGTATTAATGGTTA+TGG - chr8_1:19147612-19147631 Msa1183760:intron 40.0%
TTCTTCAGATGAACGACTTC+AGG - chr8_1:19147857-19147876 Msa1183760:intron 40.0%
ACAGTACCTGTAGTATTCTC+TGG + chr8_1:19147901-19147920 None:intergenic 40.0%
ATGTGCTGAACTTTATGTCC+TGG + chr8_1:19148409-19148428 None:intergenic 40.0%
! CAATGCTAAGTTGCCCTTTT+TGG + chr8_1:19148549-19148568 None:intergenic 40.0%
CAAAAAGGGCAACTTAGCAT+TGG - chr8_1:19148547-19148566 Msa1183760:intron 40.0%
!! ATGTTAACTTGTGCCCTCAA+GGG + chr8_1:19148655-19148674 None:intergenic 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr8_1:19148656-19148675 None:intergenic 40.0%
AAGGAAGACAATACAGACCA+GGG + chr8_1:19148729-19148748 None:intergenic 40.0%
! TTGTCTTCCTTGTTTCTCCT+CGG - chr8_1:19148738-19148757 Msa1183760:intron 40.0%
! GAAAGGTCCTACACACATTT+TGG - chr8_1:19148826-19148845 Msa1183760:intron 40.0%
! GTCCTACACACATTTTGGAT+GGG - chr8_1:19148831-19148850 Msa1183760:intron 40.0%
! TCCTACACACATTTTGGATG+GGG - chr8_1:19148832-19148851 Msa1183760:intron 40.0%
GTTACATTGTGTAGCTGTTG+GGG - chr8_1:19148915-19148934 Msa1183760:intron 40.0%
GACAAAAGAGTCTACATGCA+TGG + chr8_1:19149086-19149105 None:intergenic 40.0%
!! ACCCCACTTTCTGAAATTTC+TGG - chr8_1:19149216-19149235 Msa1183760:intron 40.0%
ATCATCTGTAAGAGAGACTG+AGG + chr8_1:19149299-19149318 None:intergenic 40.0%
TCTCTTACAGATGATGCACA+AGG - chr8_1:19149304-19149323 Msa1183760:intron 40.0%
!! AGAGGCAAATAAGGTTGATG+AGG - chr8_1:19149670-19149689 Msa1183760:CDS 40.0%
AGAGAAGAACCAATGCAAGA+AGG - chr8_1:19149732-19149751 Msa1183760:CDS 40.0%
GAGTGCATAAAGAAGTTACC+AGG - chr8_1:19149827-19149846 Msa1183760:intron 40.0%
TCCATACGTTCCTTAGTTGT+GGG + chr8_1:19149932-19149951 None:intergenic 40.0%
ATCCATACGTTCCTTAGTTG+TGG + chr8_1:19149933-19149952 None:intergenic 40.0%
TAGGGTGAGGTTTATGTTGA+AGG - chr8_1:19147455-19147474 Msa1183760:intron 40.0%
GAAGGAATAGATGGCAAGTA+AGG - chr8_1:19147493-19147512 Msa1183760:intron 40.0%
!! AGTTGATGAAAAGGTGCCAA+AGG - chr8_1:19150069-19150088 Msa1183760:CDS 40.0%
!! GTTGATGAAAAGGTGCCAAA+GGG - chr8_1:19150070-19150089 Msa1183760:CDS 40.0%
!! TTGATGAAAAGGTGCCAAAG+GGG - chr8_1:19150071-19150090 Msa1183760:CDS 40.0%
!!! GACCTTTTTTATGATGGAGG+TGG - chr8_1:19150141-19150160 Msa1183760:CDS 40.0%
CTCCACCTCCATCATAAAAA+AGG + chr8_1:19150146-19150165 None:intergenic 40.0%
!!! CTTTTTTATGATGGAGGTGG+AGG - chr8_1:19150144-19150163 Msa1183760:CDS 40.0%
!!! GTTTTGAAGGTCGTGGATGA+TGG + chr8_1:19142106-19142125 None:intergenic 45.0%
!! GCCGGTTTTCTTTTGGTTGT+AGG + chr8_1:19142190-19142209 None:intergenic 45.0%
!!! TGATTTTTGGCCCCAAACCA+AGG - chr8_1:19142259-19142278 Msa1183760:three_prime_UTR 45.0%
!!! GATTTTTGGCCCCAAACCAA+GGG - chr8_1:19142260-19142279 Msa1183760:three_prime_UTR 45.0%
! TACTCCAATCCCTTGGTTTG+GGG + chr8_1:19142272-19142291 None:intergenic 45.0%
GGAATTTGGGGATGAGTTTG+AGG - chr8_1:19142371-19142390 Msa1183760:three_prime_UTR 45.0%
AGCGATGAAAAGATGGGGAT+TGG - chr8_1:19142422-19142441 Msa1183760:three_prime_UTR 45.0%
!! GGTGAAGGAGAAAGTGTTGT+TGG - chr8_1:19142479-19142498 Msa1183760:three_prime_UTR 45.0%
TATTGACACGTGTCAGACAC+TGG - chr8_1:19142794-19142813 Msa1183760:intron 45.0%
TTATGGTTGCGTGCAATCGT+TGG - chr8_1:19142912-19142931 Msa1183760:intron 45.0%
GTCCCGGAAATGTACGAATT+TGG - chr8_1:19142976-19142995 Msa1183760:intron 45.0%
GGACGTTGTGATCACAAATG+TGG - chr8_1:19142997-19143016 Msa1183760:intron 45.0%
TCACAAATGTGGTCGGAGTA+AGG - chr8_1:19143008-19143027 Msa1183760:intron 45.0%
CACAAATGTGGTCGGAGTAA+GGG - chr8_1:19143009-19143028 Msa1183760:intron 45.0%
AAAACGCAACGCAACTGCAA+TGG + chr8_1:19143087-19143106 None:intergenic 45.0%
GATTTGGGCAGGCTACATAA+CGG + chr8_1:19143124-19143143 None:intergenic 45.0%
TATGTAGCCTGCCCAAATCT+CGG - chr8_1:19143125-19143144 Msa1183760:intron 45.0%
TTGCTCATACCGGGTATAGA+AGG - chr8_1:19144143-19144162 Msa1183760:three_prime_UTR 45.0%
TTAGGAGCTGATGCTTGACT+TGG + chr8_1:19144767-19144786 None:intergenic 45.0%
!! GCTTATTTTCCTCTCACCGT+TGG - chr8_1:19144809-19144828 Msa1183760:three_prime_UTR 45.0%
GTTTGCTTGACGAATGGGTA+TGG - chr8_1:19145028-19145047 Msa1183760:three_prime_UTR 45.0%
ACATAGGAACGGAAAGGTTG+AGG + chr8_1:19145588-19145607 None:intergenic 45.0%
CAACCTTTCCGTTCCTATGT+CGG - chr8_1:19145588-19145607 Msa1183760:intron 45.0%
AACCTTTCCGTTCCTATGTC+GGG - chr8_1:19145589-19145608 Msa1183760:intron 45.0%
! TCGGGAAAGTTTTCCAACGT+GGG - chr8_1:19145607-19145626 Msa1183760:intron 45.0%
AATATAGATGGGACCCACGT+TGG + chr8_1:19145623-19145642 None:intergenic 45.0%
TGATATGGAAAGAAAGGGGG+TGG + chr8_1:19145699-19145718 None:intergenic 45.0%
! CGATTTTTATGGGGAGCCTA+AGG + chr8_1:19145748-19145767 None:intergenic 45.0%
ATGGAAAGAAATAGCCGTGC+CGG - chr8_1:19146742-19146761 Msa1183760:intron 45.0%
AGAAGGAAGAGGCAAAACAG+AGG - chr8_1:19146812-19146831 Msa1183760:intron 45.0%
CGTCTCACAAATCTTCGAGA+AGG - chr8_1:19146939-19146958 Msa1183760:intron 45.0%
! AATCTTCGAGAAGGCTCTGA+TGG - chr8_1:19146948-19146967 Msa1183760:intron 45.0%
! TGAGTTGCCTGATTTGAGTG+TGG - chr8_1:19147020-19147039 Msa1183760:intron 45.0%
TCGTTGTCCACACTCAAATC+AGG + chr8_1:19147030-19147049 None:intergenic 45.0%
AATGCCAGGAGGAATTTGAG+AGG - chr8_1:19147082-19147101 Msa1183760:intron 45.0%
ATGCCAGGAGGAATTTGAGA+GGG - chr8_1:19147083-19147102 Msa1183760:intron 45.0%
!! AAATAAGGTTGATGAGGCCG+AGG - chr8_1:19147128-19147147 Msa1183760:intron 45.0%
!! AATAAGGTTGATGAGGCCGA+GGG - chr8_1:19147129-19147148 Msa1183760:intron 45.0%
AGAGAAGAACCAAGGCAAGA+AGG - chr8_1:19147184-19147203 Msa1183760:intron 45.0%
TCCTGATGAGGAAGATGTTG+AGG - chr8_1:19147314-19147333 Msa1183760:intron 45.0%
GGAATAGATGGCAAGTAAGG+AGG - chr8_1:19147496-19147515 Msa1183760:intron 45.0%
TGGTCCAAAGAAGATTGAGG+AGG - chr8_1:19147527-19147546 Msa1183760:intron 45.0%
AGATGTTATGCAAGAGAGGC+AGG - chr8_1:19147557-19147576 Msa1183760:intron 45.0%
! CAAGCTGGTAGCATGGATTT+TGG - chr8_1:19147588-19147607 Msa1183760:intron 45.0%
!! AGCATGGATTTTGGTCCTAG+CGG - chr8_1:19147597-19147616 Msa1183760:intron 45.0%
TTATCTGAGCGCACACCTTA+TGG - chr8_1:19147639-19147658 Msa1183760:intron 45.0%
!! AGATCCTCTCTAGAGCCATA+AGG + chr8_1:19147657-19147676 None:intergenic 45.0%
TCATATCCAGCTGGACTTGA+AGG + chr8_1:19147705-19147724 None:intergenic 45.0%
ACTATGGCAACAGAGACTTG+AGG - chr8_1:19147754-19147773 Msa1183760:intron 45.0%
CAACAGAGACTTGAGGAATC+AGG - chr8_1:19147761-19147780 Msa1183760:intron 45.0%
GAGACTTGAGGAATCAGGAT+CGG - chr8_1:19147766-19147785 Msa1183760:intron 45.0%
ATCAGGATCGGAATCTCAAC+AGG - chr8_1:19147778-19147797 Msa1183760:intron 45.0%
CAGCAACCAGAGAATACTAC+AGG - chr8_1:19147892-19147911 Msa1183760:intron 45.0%
CACCAGCAGATTAACTGATG+AGG + chr8_1:19148068-19148087 None:intergenic 45.0%
CACCAGCAGATTAACTGATG+AGG + chr8_1:19148068-19148087 None:intergenic 45.0%
! TGAGACGTTTGGAGTGGTTT+GGG + chr8_1:19148383-19148402 None:intergenic 45.0%
! TTGAGACGTTTGGAGTGGTT+TGG + chr8_1:19148384-19148403 None:intergenic 45.0%
TGGAATTGAGACGTTTGGAG+TGG + chr8_1:19148389-19148408 None:intergenic 45.0%
ACTCCAAACGTCTCAATTCC+AGG - chr8_1:19148388-19148407 Msa1183760:intron 45.0%
TGTCCTGGAATTGAGACGTT+TGG + chr8_1:19148394-19148413 None:intergenic 45.0%
GTGATCAGGGTCTGTAACAT+TGG - chr8_1:19148444-19148463 Msa1183760:intron 45.0%
GTGATCAGGGTCTGTAACAT+TGG - chr8_1:19148444-19148463 Msa1183760:intron 45.0%
TTCCTTAACATGTGCCCTTG+AGG - chr8_1:19148638-19148657 Msa1183760:intron 45.0%
TCCTTAACATGTGCCCTTGA+GGG - chr8_1:19148639-19148658 Msa1183760:intron 45.0%
AGTTAAATGCAGTTTCCCCC+TGG - chr8_1:19148709-19148728 Msa1183760:intron 45.0%
AGGAAGACAATACAGACCAG+GGG + chr8_1:19148728-19148747 None:intergenic 45.0%
CAAGGAAGACAATACAGACC+AGG + chr8_1:19148730-19148749 None:intergenic 45.0%
TAATGGTTGGAGACTGCGAA+AGG - chr8_1:19148809-19148828 Msa1183760:intron 45.0%
! GGTCCTACACACATTTTGGA+TGG - chr8_1:19148830-19148849 Msa1183760:intron 45.0%
TCCCCATCCAAAATGTGTGT+AGG + chr8_1:19148836-19148855 None:intergenic 45.0%
! CACACATTTTGGATGGGGAA+AGG - chr8_1:19148837-19148856 Msa1183760:intron 45.0%
! ACATTTTGGATGGGGAAAGG+AGG - chr8_1:19148840-19148859 Msa1183760:intron 45.0%
! GATGGGGAAAGGAGGTATAT+GGG - chr8_1:19148848-19148867 Msa1183760:intron 45.0%
TGTGCATGCTGTGTATGTGT+CGG + chr8_1:19149000-19149019 None:intergenic 45.0%
! TTCTACTAGCTTCCAGCAGA+GGG - chr8_1:19149259-19149278 Msa1183760:intron 45.0%
TGTAAGAGAGACTGAGGAGA+AGG + chr8_1:19149293-19149312 None:intergenic 45.0%
CGTCTCACAAATCTTCGAGA+AGG - chr8_1:19146939-19146958 Msa1183760:intron 45.0%
! AATCTTCGAGAAGGCTCTGA+TGG - chr8_1:19146948-19146967 Msa1183760:intron 45.0%
! TCAGTTGCCTGATTTGAGTG+TGG - chr8_1:19149568-19149587 Msa1183760:intron 45.0%
TCGTTGTCCACACTCAAATC+AGG + chr8_1:19147030-19147049 None:intergenic 45.0%
!! AAATAAGGTTGATGAGGCCG+AGG - chr8_1:19147128-19147147 Msa1183760:intron 45.0%
!! AATAAGGTTGATGAGGCCGA+GGG - chr8_1:19147129-19147148 Msa1183760:intron 45.0%
TGACATGTGCCTTCTTGCAT+TGG + chr8_1:19149744-19149763 None:intergenic 45.0%
TCCTGATGAGGAAGATGTTG+AGG - chr8_1:19147314-19147333 Msa1183760:intron 45.0%
GATTGACCATCCCACAACTA+AGG - chr8_1:19149919-19149938 Msa1183760:intron 45.0%
TACGTTCCTTAGTTGTGGGA+TGG + chr8_1:19149928-19149947 None:intergenic 45.0%
TCCCACAACTAAGGAACGTA+TGG - chr8_1:19149928-19149947 Msa1183760:intron 45.0%
GGAATAGATGGCAAGTAAGG+AGG - chr8_1:19147496-19147515 Msa1183760:intron 45.0%
GGTGCCAAAGGGGTTTATTA+CGG - chr8_1:19150081-19150100 Msa1183760:CDS 45.0%
ATCGCCGTAATAAACCCCTT+TGG + chr8_1:19150088-19150107 None:intergenic 45.0%
GGCGATGAAAATTTGGGGAT+CGG - chr8_1:19150102-19150121 Msa1183760:CDS 45.0%
!! AGAAAAAATATTTAAATAAT+TGG - chr8_1:19144905-19144924 Msa1183760:three_prime_UTR 5.0%
GGTGGCGAGTTTGCAAGAAA+TGG + chr8_1:19141986-19142005 None:intergenic 50.0%
TCCTTCTCCGGCGAGAAAAT+CGG - chr8_1:19142018-19142037 Msa1183760:three_prime_UTR 50.0%
!!! TGATTCGCCGATTTTCTCGC+CGG + chr8_1:19142028-19142047 None:intergenic 50.0%
!!! GGCGTTTGTTTTGAAGGTCG+TGG + chr8_1:19142113-19142132 None:intergenic 50.0%
GACCTTCAAAACAAACGCCG+CGG - chr8_1:19142114-19142133 Msa1183760:three_prime_UTR 50.0%
! ACGGTTGTGGTGGAGGAATT+TGG - chr8_1:19142357-19142376 Msa1183760:three_prime_UTR 50.0%
! CGGTTGTGGTGGAGGAATTT+GGG - chr8_1:19142358-19142377 Msa1183760:three_prime_UTR 50.0%
! GGTTGTGGTGGAGGAATTTG+GGG - chr8_1:19142359-19142378 Msa1183760:three_prime_UTR 50.0%
AAGATGGGGATTGGATCCGA+CGG - chr8_1:19142431-19142450 Msa1183760:three_prime_UTR 50.0%
!! CGTTGAAGATTTTGACGCCG+AGG - chr8_1:19142520-19142539 Msa1183760:three_prime_UTR 50.0%
TGTTCTTACTCCTGATGCGG+TGG - chr8_1:19142581-19142600 Msa1183760:three_prime_UTR 50.0%
! GCACCGACACGTCTTATGAA+AGG + chr8_1:19142825-19142844 None:intergenic 50.0%
TGTCGGTGCGAATGTGCTAT+TGG - chr8_1:19142836-19142855 Msa1183760:intron 50.0%
! GTCGGTGCGAATGTGCTATT+GGG - chr8_1:19142837-19142856 Msa1183760:intron 50.0%
TCTTGATATTGCGGCTGACG+TGG - chr8_1:19143058-19143077 Msa1183760:intron 50.0%
AAGGTCTGCGACCGAGATTT+GGG + chr8_1:19143139-19143158 None:intergenic 50.0%
AAAGGTCTGCGACCGAGATT+TGG + chr8_1:19143140-19143159 None:intergenic 50.0%
!! ACGCAGAAGAAAGTGCCGAT+GGG - chr8_1:19144062-19144081 Msa1183760:intron 50.0%
ACTATGACACCAACGGTGAG+AGG + chr8_1:19144821-19144840 None:intergenic 50.0%
TTCCCGACATAGGAACGGAA+AGG + chr8_1:19145594-19145613 None:intergenic 50.0%
! GTCGGGAAAGTTTTCCAACG+TGG - chr8_1:19145606-19145625 Msa1183760:intron 50.0%
TGGAAAGAAATAGCCGTGCC+GGG - chr8_1:19146743-19146762 Msa1183760:intron 50.0%
GATCCACAAGGCTGAGAAGA+AGG - chr8_1:19146795-19146814 Msa1183760:intron 50.0%
CTTCCTTCTTCTCAGCCTTG+TGG + chr8_1:19146801-19146820 None:intergenic 50.0%
CAAGGCTGAGAAGAAGGAAG+AGG - chr8_1:19146801-19146820 Msa1183760:intron 50.0%
TGCCAACTTCTGCTCACATC+TGG - chr8_1:19146993-19147012 Msa1183760:intron 50.0%
AGCCAGATGTGAGCAGAAGT+TGG + chr8_1:19146998-19147017 None:intergenic 50.0%
TGCCAGGAGGAATTTGAGAG+GGG - chr8_1:19147084-19147103 Msa1183760:intron 50.0%
GGGTGAACGAGAACAAGAAG+AGG - chr8_1:19147104-19147123 Msa1183760:intron 50.0%
AAGGGAGCAGAGAAGAACCA+AGG - chr8_1:19147176-19147195 Msa1183760:intron 50.0%
TAACATGCGCCTTCTTGCCT+TGG + chr8_1:19147196-19147215 None:intergenic 50.0%
! AAGGCAAGAAGGCGCATGTT+AGG - chr8_1:19147195-19147214 Msa1183760:intron 50.0%
TCAGTGTCACGATCCTGATG+AGG - chr8_1:19147302-19147321 Msa1183760:intron 50.0%
GCCTCAACATCTTCCTCATC+AGG + chr8_1:19147318-19147337 None:intergenic 50.0%
TCAAGCACAAGCTGGTAGCA+TGG - chr8_1:19147581-19147600 Msa1183760:intron 50.0%
!! CACACCTTATGGCTCTAGAG+AGG - chr8_1:19147650-19147669 Msa1183760:intron 50.0%
CGCCTCATCAGTTAATCTGC+TGG - chr8_1:19148063-19148082 Msa1183760:intron 50.0%
CGCCTCATCAGTTAATCTGC+TGG - chr8_1:19148063-19148082 Msa1183760:intron 50.0%
! TTGGAGTGGTTTGGGTGCTT+GGG + chr8_1:19148375-19148394 None:intergenic 50.0%
! TTTGGAGTGGTTTGGGTGCT+TGG + chr8_1:19148376-19148395 None:intergenic 50.0%
GGAAGACAATACAGACCAGG+GGG + chr8_1:19148727-19148746 None:intergenic 50.0%
! TCTTCCTTGTTTCTCCTCGG+AGG - chr8_1:19148741-19148760 Msa1183760:intron 50.0%
AAGGGAAATTCGATCCTCCG+AGG + chr8_1:19148758-19148777 None:intergenic 50.0%
! GGATGGGGAAAGGAGGTATA+TGG - chr8_1:19148847-19148866 Msa1183760:intron 50.0%
! GAAATTTCTGGATCCGTCCC+TGG - chr8_1:19149228-19149247 Msa1183760:intron 50.0%
CTAGTAGAACGTTGCCACCA+GGG + chr8_1:19149248-19149267 None:intergenic 50.0%
! GTTCTACTAGCTTCCAGCAG+AGG - chr8_1:19149258-19149277 Msa1183760:intron 50.0%
! TCTACTAGCTTCCAGCAGAG+GGG - chr8_1:19149260-19149279 Msa1183760:intron 50.0%
AAGGAATCAAACCCCTCTGC+TGG + chr8_1:19149274-19149293 None:intergenic 50.0%
ATGCAGAAGAGGCAAAGCAG+AGG - chr8_1:19149360-19149379 Msa1183760:CDS 50.0%
GACAACGCAATCACTCTCAG+TGG - chr8_1:19149461-19149480 Msa1183760:CDS 50.0%
TGCCAACTTCTGCTCACATC+TGG - chr8_1:19146993-19147012 Msa1183760:intron 50.0%
AGCCAGATGTGAGCAGAAGT+TGG + chr8_1:19146998-19147017 None:intergenic 50.0%
TGCCAGGAGGAATTTGAGAG+CGG - chr8_1:19147084-19147103 Msa1183760:intron 50.0%
GAAGTTACCAGGTCAGTGTC+AGG - chr8_1:19149838-19149857 Msa1183760:intron 50.0%
TCAGTGTCAGGATCCTGATG+AGG - chr8_1:19149850-19149869 Msa1183760:intron 50.0%
GCCTCAACATCTTCCTCATC+AGG + chr8_1:19147318-19147337 None:intergenic 50.0%
!! GGTGGAGGAGAAAGTGTTGT+TGG - chr8_1:19150159-19150178 Msa1183760:CDS 50.0%
! TTTTCTCGCCGGAGAAGGAG+AGG + chr8_1:19142017-19142036 None:intergenic 55.0%
!!! TGCCGCGGCGTTTGTTTTGA+AGG + chr8_1:19142119-19142138 None:intergenic 55.0%
TCTGACTTCGGCGCGTGTTA+AGG + chr8_1:19142151-19142170 None:intergenic 55.0%
TTAACACGCGCCGAAGTCAG+AGG - chr8_1:19142150-19142169 Msa1183760:three_prime_UTR 55.0%
TCGTCCACCACCTCTGACTT+CGG + chr8_1:19142163-19142182 None:intergenic 55.0%
!! GTGCTCGGCCGGTTTTCTTT+TGG + chr8_1:19142197-19142216 None:intergenic 55.0%
CCAAAAATCACACCACCGCC+GGG + chr8_1:19142249-19142268 None:intergenic 55.0%
GCCAAAAATCACACCACCGC+CGG + chr8_1:19142250-19142269 None:intergenic 55.0%
TTGGCCCCAAACCAAGGGAT+TGG - chr8_1:19142265-19142284 Msa1183760:three_prime_UTR 55.0%
GAGGCTTGCGATTTCGACTG+CGG - chr8_1:19142314-19142333 Msa1183760:three_prime_UTR 55.0%
TGCAGCGGTGAATACGGTTG+TGG - chr8_1:19142344-19142363 Msa1183760:three_prime_UTR 55.0%
AGCGGTGAATACGGTTGTGG+TGG - chr8_1:19142347-19142366 Msa1183760:three_prime_UTR 55.0%
GGTGAATACGGTTGTGGTGG+AGG - chr8_1:19142350-19142369 Msa1183760:three_prime_UTR 55.0%
TGAGGGGAATGCGAAGACGA+AGG - chr8_1:19142389-19142408 Msa1183760:three_prime_UTR 55.0%
TCGGCACTTTCTTCTGCGTC+TGG + chr8_1:19144061-19144080 None:intergenic 55.0%
!! GACGCAGAAGAAAGTGCCGA+TGG - chr8_1:19144061-19144080 Msa1183760:intron 55.0%
!! CGCAGAAGAAAGTGCCGATG+GGG - chr8_1:19144063-19144082 Msa1183760:intron 55.0%
AAATAGCCGTGCCGGGAAGA+GGG - chr8_1:19146750-19146769 Msa1183760:intron 55.0%
CAACTCTCTACCCCTCTTCC+CGG + chr8_1:19146764-19146783 None:intergenic 55.0%
GACAACGCGATCACTCTCAG+TGG - chr8_1:19146913-19146932 Msa1183760:intron 55.0%
CACCCCTCTCAAATTCCTCC+TGG + chr8_1:19147089-19147108 None:intergenic 55.0%
TGACAGCTTGACCTCACCCT+CGG + chr8_1:19147148-19147167 None:intergenic 55.0%
GACAGACCTTCAAGTCCAGC+TGG - chr8_1:19147696-19147715 Msa1183760:intron 55.0%
GCGTGAGGTGAAGTTGCAAC+AGG + chr8_1:19147804-19147823 None:intergenic 55.0%
! GCCCTCAAGGGCACATGTTA+AGG + chr8_1:19148643-19148662 None:intergenic 55.0%
CGATCCTCCGAGGAGAAACA+AGG + chr8_1:19148748-19148767 None:intergenic 55.0%
! ATTTCTGGATCCGTCCCTGG+TGG - chr8_1:19149231-19149250 Msa1183760:intron 55.0%
TAGAACGTTGCCACCAGGGA+CGG + chr8_1:19149244-19149263 None:intergenic 55.0%
GCTAGTAGAACGTTGCCACC+AGG + chr8_1:19149249-19149268 None:intergenic 55.0%
CACCGCTCTCAAATTCCTCC+TGG + chr8_1:19149637-19149656 None:intergenic 55.0%
CGGTGAGCGAGAACAAGAAG+AGG - chr8_1:19149652-19149671 Msa1183760:CDS 55.0%
TGACAGCTTGACCTCACCCT+CGG + chr8_1:19147148-19147167 None:intergenic 55.0%
TCAGGATCCTGACACTGACC+TGG + chr8_1:19149848-19149867 None:intergenic 55.0%
GGAGAAGGAGAGGAGTGGGA+GGG + chr8_1:19142007-19142026 None:intergenic 60.0%
CTCCCACTCCTCTCCTTCTC+CGG - chr8_1:19142006-19142025 Msa1183760:three_prime_UTR 60.0%
!! GCCGATTTTCTCGCCGGAGA+AGG + chr8_1:19142022-19142041 None:intergenic 60.0%
GCGTGAGGTGGAAGGAGATG+CGG + chr8_1:19142067-19142086 None:intergenic 60.0%
! GAAGGTCGTGGATGATGGCG+CGG + chr8_1:19142101-19142120 None:intergenic 60.0%
TTCGGCGCGTGTTAAGGTGG+AGG + chr8_1:19142145-19142164 None:intergenic 60.0%
GACTTCGGCGCGTGTTAAGG+TGG + chr8_1:19142148-19142167 None:intergenic 60.0%
AAAACCGGCCGAGCACGTCA+GGG - chr8_1:19142201-19142220 Msa1183760:three_prime_UTR 60.0%
GACTGGAACCCTGACGTGCT+CGG + chr8_1:19142212-19142231 None:intergenic 60.0%
AGTCGTACACCTCTCCGACC+CGG - chr8_1:19142228-19142247 Msa1183760:three_prime_UTR 60.0%
AAATCACACCACCGCCGGGT+CGG + chr8_1:19142245-19142264 None:intergenic 60.0%
! CCCGGCGGTGGTGTGATTTT+TGG - chr8_1:19142246-19142265 Msa1183760:three_prime_UTR 60.0%
GCTTGCGATTTCGACTGCGG+TGG - chr8_1:19142317-19142336 Msa1183760:three_prime_UTR 60.0%
GGCGAGTGCAGCGGTGAATA+CGG - chr8_1:19142338-19142357 Msa1183760:three_prime_UTR 60.0%
TCTGCGACCGAGATTTGGGC+AGG + chr8_1:19143135-19143154 None:intergenic 60.0%
GAAATAGCCGTGCCGGGAAG+AGG - chr8_1:19146749-19146768 Msa1183760:intron 60.0%
AATAGCCGTGCCGGGAAGAG+GGG - chr8_1:19146751-19146770 Msa1183760:intron 60.0%
AGGCAGGCTCAAGCACAAGC+TGG - chr8_1:19147573-19147592 Msa1183760:intron 60.0%
TCACCTCACGCTCAGTCGCA+AGG - chr8_1:19147813-19147832 Msa1183760:intron 60.0%
CACCTCACGCTCAGTCGCAA+GGG - chr8_1:19147814-19147833 Msa1183760:intron 60.0%
GAAGGAGAGGAGTGGGAGGG+TGG + chr8_1:19142004-19142023 None:intergenic 65.0%
CGGAGAAGGAGAGGAGTGGG+AGG + chr8_1:19142008-19142027 None:intergenic 65.0%
CGCCGGAGAAGGAGAGGAGT+GGG + chr8_1:19142011-19142030 None:intergenic 65.0%
TCGCCGGAGAAGGAGAGGAG+TGG + chr8_1:19142012-19142031 None:intergenic 65.0%
! GATGATGGCGCGGTGGACGA+CGG + chr8_1:19142091-19142110 None:intergenic 65.0%
! TTAAGGTGGAGGCGGTGCCG+CGG + chr8_1:19142134-19142153 None:intergenic 65.0%
GGCGCGTGTTAAGGTGGAGG+CGG + chr8_1:19142142-19142161 None:intergenic 65.0%
ACACGCGCCGAAGTCAGAGG+TGG - chr8_1:19142153-19142172 Msa1183760:three_prime_UTR 65.0%
GAAAACCGGCCGAGCACGTC+AGG - chr8_1:19142200-19142219 Msa1183760:three_prime_UTR 65.0%
! GGGTCGGAGAGGTGTACGAC+TGG + chr8_1:19142229-19142248 None:intergenic 65.0%
CTCTACCCCTCTTCCCGGCA+CGG + chr8_1:19146759-19146778 None:intergenic 65.0%
!! GGTTGATGAGGCCGAGGGTG+AGG - chr8_1:19147134-19147153 Msa1183760:intron 65.0%
!! GGTTGATGAGGCCGAGGGTG+AGG - chr8_1:19147134-19147153 Msa1183760:intron 65.0%
ACGACGGCGCGTGAGGTGGA+AGG + chr8_1:19142075-19142094 None:intergenic 70.0%
! GGTCGTGGATGATGGCGCGG+TGG + chr8_1:19142098-19142117 None:intergenic 70.0%
CGCGCCGAAGTCAGAGGTGG+TGG - chr8_1:19142156-19142175 Msa1183760:three_prime_UTR 70.0%
GGAACCCTGACGTGCTCGGC+CGG + chr8_1:19142208-19142227 None:intergenic 70.0%
CGTACACCTCTCCGACCCGG+CGG - chr8_1:19142231-19142250 Msa1183760:three_prime_UTR 70.0%
GACTGCGGTGGCGAGTGCAG+CGG - chr8_1:19142329-19142348 Msa1183760:three_prime_UTR 70.0%
GGCCCTTGCGACTGAGCGTG+AGG + chr8_1:19147819-19147838 None:intergenic 70.0%
GTGGACGACGGCGCGTGAGG+TGG + chr8_1:19142079-19142098 None:intergenic 75.0%
ACACCTCTCCGACCCGGCGG+TGG - chr8_1:19142234-19142253 Msa1183760:three_prime_UTR 75.0%
ACACCACCGCCGGGTCGGAG+AGG + chr8_1:19142240-19142259 None:intergenic 75.0%
! GCGGTGGACGACGGCGCGTG+AGG + chr8_1:19142082-19142101 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19141841 19150187 19141841 ID=Msa1183760;Name=Msa1183760
chr8_1 mRNA 19141841 19150187 19141841 ID=Msa1183760-mRNA-1;Parent=Msa1183760;Name=Msa1183760-mRNA-1;_AED=0.17;_eAED=0.17;_QI=0|0.33|0.28|1|0.33|0|7|2040|262
chr8_1 exon 19141841 19142760 19141841 ID=Msa1183760-mRNA-1:exon:7405;Parent=Msa1183760-mRNA-1
chr8_1 exon 19144115 19145288 19144115 ID=Msa1183760-mRNA-1:exon:7404;Parent=Msa1183760-mRNA-1
chr8_1 exon 19147688 19147693 19147688 ID=Msa1183760-mRNA-1:exon:7403;Parent=Msa1183760-mRNA-1
chr8_1 exon 19147944 19147972 19147944 ID=Msa1183760-mRNA-1:exon:7402;Parent=Msa1183760-mRNA-1
chr8_1 exon 19149335 19149548 19149335 ID=Msa1183760-mRNA-1:exon:7401;Parent=Msa1183760-mRNA-1
chr8_1 exon 19149570 19149806 19149570 ID=Msa1183760-mRNA-1:exon:7400;Parent=Msa1183760-mRNA-1
chr8_1 exon 19149939 19150187 19149939 ID=Msa1183760-mRNA-1:exon:7399;Parent=Msa1183760-mRNA-1
chr8_1 CDS 19149939 19150187 19149939 ID=Msa1183760-mRNA-1:cds;Parent=Msa1183760-mRNA-1
chr8_1 CDS 19149570 19149806 19149570 ID=Msa1183760-mRNA-1:cds;Parent=Msa1183760-mRNA-1
chr8_1 CDS 19149335 19149548 19149335 ID=Msa1183760-mRNA-1:cds;Parent=Msa1183760-mRNA-1
chr8_1 CDS 19147944 19147972 19147944 ID=Msa1183760-mRNA-1:cds;Parent=Msa1183760-mRNA-1
chr8_1 CDS 19147688 19147693 19147688 ID=Msa1183760-mRNA-1:cds;Parent=Msa1183760-mRNA-1
chr8_1 CDS 19145235 19145288 19145235 ID=Msa1183760-mRNA-1:cds;Parent=Msa1183760-mRNA-1
chr8_1 three_prime_UTR 19144115 19145234 19144115 ID=Msa1183760-mRNA-1:three_prime_utr;Parent=Msa1183760-mRNA-1
chr8_1 three_prime_UTR 19141841 19142760 19141841 ID=Msa1183760-mRNA-1:three_prime_utr;Parent=Msa1183760-mRNA-1
Gene Sequence

>Msa1183760

ATGGCTTCACTCTCTTCAACACTAACACCCACTTCAACTTCTCTTTCTTTCTTCTCTTCTTCAATTTTCATCTCTAATTCAATTCCCAAAATCAAATTCACTCCAAATTCAAATTCAAATTCACATTCTAGTAATTCACTTTCCATTTCTTGCAAACTCGCCACCCTCCCACTCCTCTCCTTCTCCGGCGAGAAAATCGGCGAATCAACTCTCGACGTTAAATCCGCATCTCCTTCCACCTCACGCGCCGGTTCCAGTCGTACACCTCTCCGACCCGGCGGTGGTGTGATTTTTGGCCCCAAACCAAGGGATTGGAGTATTAAGATTAATAAGAAGGAGAAGAGGCTTGCGATTTCGACTGCGGTGGCGAGTGCAGCGGTGAATACGGTTGTGGTGGAGGAATTTGGGGATGAGTTTGAGGGGAATGCGAAGACGAAGGAGTTTATTGCAGCGATGAAAAGATGGGGATTGGATCCGACGGAGAAAGTGAAGGAGAAAGTGTTGTTGGCTAGTAGGAATATTGGGACGTTGAAGATTTTGACGCCGAGGACGTTGAATTTGTATGATGTTTTGAATGCTGATAAGATTGTTCTTACTCCTGATGCGGTGGATTATTTGAATGGTAGGTATGGGGATAGTGAACAAGATGATGATGGTGATTATGATGAAGAAGTAATAGTTGTAGAAGATGGTGAAGAAGGACCAGACGCAGAAGAAAGTGCCGATGGGATGCATAAATGGAAAGAAATAGCCGTGCCGGGAAGAGGGGTAGAGAGTTGTATTATTTGA

Protein sequence

>Msa1183760

MASLSSTLTPTSTSLSFFSSSIFISNSIPKIKFTPNSNSNSHSSNSLSISCKLATLPLLSFSGEKIGESTLDVKSASPSTSRAGSSRTPLRPGGGVIFGPKPRDWSIKINKKEKRLAISTAVASAAVNTVVVEEFGDEFEGNAKTKEFIAAMKRWGLDPTEKVKEKVLLASRNIGTLKILTPRTLNLYDVLNADKIVLTPDAVDYLNGRYGDSEQDDDGDYDEEVIVVEDGEEGPDAEESADGMHKWKEIAVPGRGVESCII*