Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690500 | XP_003607331.1 | 99.187 | 369 | 3 | 0 | 1 | 369 | 1 | 369 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690500 | sp|Q43082|HEM3_PEA | 94.038 | 369 | 22 | 0 | 1 | 369 | 1 | 369 | 0.0 | 667 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690500 | G7JQM6 | 99.187 | 369 | 3 | 0 | 1 | 369 | 1 | 369 | 0.0 | 746 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001540 | Msa0690500 | 0.806471 | 8.096690e-50 | -8.615850e-47 |
| Msa0001950 | Msa0690500 | 0.824393 | 8.272222e-54 | -8.615850e-47 |
| Msa0003470 | Msa0690500 | 0.840787 | 7.044467e-58 | -8.615850e-47 |
| Msa0006580 | Msa0690500 | 0.803951 | 2.728405e-49 | -8.615850e-47 |
| Msa0006870 | Msa0690500 | 0.812757 | 3.611204e-51 | -8.615850e-47 |
| Msa0009210 | Msa0690500 | 0.804787 | 1.826611e-49 | -8.615850e-47 |
| Msa0012460 | Msa0690500 | 0.844084 | 9.413032e-59 | -8.615850e-47 |
| Msa0016110 | Msa0690500 | 0.807369 | 5.228677e-50 | -8.615850e-47 |
| Msa0016160 | Msa0690500 | 0.815624 | 8.405018e-52 | -8.615850e-47 |
| Msa0017120 | Msa0690500 | 0.839315 | 1.705907e-57 | -8.615850e-47 |
| Msa0017940 | Msa0690500 | 0.829570 | 4.780247e-55 | -8.615850e-47 |
| Msa0032350 | Msa0690500 | 0.815109 | 1.093868e-51 | -8.615850e-47 |
| Msa0034320 | Msa0690500 | 0.832987 | 6.906255e-56 | -8.615850e-47 |
| Msa0040520 | Msa0690500 | -0.812898 | 3.363255e-51 | -8.615850e-47 |
| Msa0043680 | Msa0690500 | 0.847277 | 1.280319e-59 | -8.615850e-47 |
| Msa0048020 | Msa0690500 | 0.827164 | 1.820035e-54 | -8.615850e-47 |
| Msa0049990 | Msa0690500 | 0.807927 | 3.980317e-50 | -8.615850e-47 |
| Msa0050580 | Msa0690500 | 0.809935 | 1.479306e-50 | -8.615850e-47 |
| Msa0059590 | Msa0690500 | 0.824384 | 8.311812e-54 | -8.615850e-47 |
| Msa0065390 | Msa0690500 | 0.846966 | 1.557821e-59 | -8.615850e-47 |
| Msa0073390 | Msa0690500 | 0.823032 | 1.722610e-53 | -8.615850e-47 |
| Msa0074250 | Msa0690500 | 0.838442 | 2.868521e-57 | -8.615850e-47 |
| Msa0077910 | Msa0690500 | 0.841199 | 5.492592e-58 | -8.615850e-47 |
| Msa0078090 | Msa0690500 | 0.808259 | 3.381634e-50 | -8.615850e-47 |
| Msa0079530 | Msa0690500 | 0.803959 | 2.717335e-49 | -8.615850e-47 |
| Msa0081300 | Msa0690500 | 0.818545 | 1.853668e-52 | -8.615850e-47 |
| Msa0082820 | Msa0690500 | 0.828639 | 8.041007e-55 | -8.615850e-47 |
| Msa0089210 | Msa0690500 | 0.819010 | 1.453287e-52 | -8.615850e-47 |
| Msa0092180 | Msa0690500 | 0.811318 | 7.432880e-51 | -8.615850e-47 |
| Msa0092660 | Msa0690500 | 0.830318 | 3.141207e-55 | -8.615850e-47 |
| Msa0092680 | Msa0690500 | 0.812588 | 3.931679e-51 | -8.615850e-47 |
| Msa0092730 | Msa0690500 | 0.837072 | 6.450288e-57 | -8.615850e-47 |
| Msa0100570 | Msa0690500 | 0.805011 | 1.640130e-49 | -8.615850e-47 |
| Msa0100860 | Msa0690500 | 0.803665 | 3.128608e-49 | -8.615850e-47 |
| Msa0103780 | Msa0690500 | 0.800559 | 1.361660e-48 | -8.615850e-47 |
| Msa0104420 | Msa0690500 | 0.826981 | 2.012963e-54 | -8.615850e-47 |
| Msa0105210 | Msa0690500 | 0.808287 | 3.335903e-50 | -8.615850e-47 |
| Msa0109870 | Msa0690500 | 0.809613 | 1.735331e-50 | -8.615850e-47 |
| Msa0110710 | Msa0690500 | 0.843357 | 1.472624e-58 | -8.615850e-47 |
| Msa0112290 | Msa0690500 | 0.827260 | 1.725513e-54 | -8.615850e-47 |
| Msa0605670 | Msa0690500 | 0.818648 | 1.756661e-52 | -8.615850e-47 |
| Msa0606140 | Msa0690500 | 0.808360 | 3.218471e-50 | -8.615850e-47 |
| Msa0607300 | Msa0690500 | 0.813455 | 2.537753e-51 | -8.615850e-47 |
| Msa0607480 | Msa0690500 | 0.880465 | 5.368663e-70 | -8.615850e-47 |
| Msa0610860 | Msa0690500 | 0.804374 | 2.227338e-49 | -8.615850e-47 |
| Msa0620090 | Msa0690500 | 0.821134 | 4.743854e-53 | -8.615850e-47 |
| Msa0623760 | Msa0690500 | 0.800510 | 1.393428e-48 | -8.615850e-47 |
| Msa0640880 | Msa0690500 | 0.832344 | 9.971269e-56 | -8.615850e-47 |
| Msa0642650 | Msa0690500 | 0.808972 | 2.381695e-50 | -8.615850e-47 |
| Msa0643800 | Msa0690500 | 0.818318 | 2.087149e-52 | -8.615850e-47 |
| Msa0646710 | Msa0690500 | 0.826155 | 3.167844e-54 | -8.615850e-47 |
| Msa0647110 | Msa0690500 | 0.834151 | 3.538075e-56 | -8.615850e-47 |
| Msa0647460 | Msa0690500 | 0.859079 | 5.298961e-63 | -8.615850e-47 |
| Msa0647750 | Msa0690500 | 0.874192 | 8.185825e-68 | -8.615850e-47 |
| Msa0659920 | Msa0690500 | 0.832669 | 8.285166e-56 | -8.615850e-47 |
| Msa0659960 | Msa0690500 | 0.832311 | 1.016372e-55 | -8.615850e-47 |
| Msa0667970 | Msa0690500 | 0.805722 | 1.163995e-49 | -8.615850e-47 |
| Msa0681890 | Msa0690500 | 0.839552 | 1.479935e-57 | -8.615850e-47 |
| Msa0683650 | Msa0690500 | 0.812100 | 5.024382e-51 | -8.615850e-47 |
| Msa0685520 | Msa0690500 | 0.809160 | 2.171087e-50 | -8.615850e-47 |
| Msa0686240 | Msa0690500 | 0.852537 | 4.326834e-61 | -8.615850e-47 |
| Msa0690500 | Msa0701320 | 0.800691 | 1.280048e-48 | -8.615850e-47 |
| Msa0690500 | Msa0703720 | 0.837340 | 5.508224e-57 | -8.615850e-47 |
| Msa0690500 | Msa0703760 | 0.852299 | 5.057781e-61 | -8.615850e-47 |
| Msa0690500 | Msa0704570 | 0.808885 | 2.486010e-50 | -8.615850e-47 |
| Msa0690500 | Msa0704720 | 0.846742 | 1.794614e-59 | -8.615850e-47 |
| Msa0690500 | Msa0705030 | 0.801823 | 7.506348e-49 | -8.615850e-47 |
| Msa0690500 | Msa0705250 | 0.809994 | 1.437119e-50 | -8.615850e-47 |
| Msa0690500 | Msa0706530 | 0.818462 | 1.935868e-52 | -8.615850e-47 |
| Msa0690500 | Msa0706580 | 0.829918 | 3.933532e-55 | -8.615850e-47 |
| Msa0690500 | Msa0707780 | 0.812468 | 4.176783e-51 | -8.615850e-47 |
| Msa0690500 | Msa0709480 | 0.820959 | 5.205337e-53 | -8.615850e-47 |
| Msa0690500 | Msa0712070 | 0.829408 | 5.235221e-55 | -8.615850e-47 |
| Msa0690500 | Msa0712500 | 0.801694 | 7.980815e-49 | -8.615850e-47 |
| Msa0690500 | Msa0717090 | 0.830101 | 3.550571e-55 | -8.615850e-47 |
| Msa0690500 | Msa0720380 | 0.823391 | 1.420285e-53 | -8.615850e-47 |
| Msa0690500 | Msa0730180 | 0.802063 | 6.699926e-49 | -8.615850e-47 |
| Msa0690500 | Msa0732100 | 0.824545 | 7.618374e-54 | -8.615850e-47 |
| Msa0690500 | Msa0733110 | 0.825373 | 4.856972e-54 | -8.615850e-47 |
| Msa0690500 | Msa0733770 | 0.806222 | 9.134394e-50 | -8.615850e-47 |
| Msa0690500 | Msa0734000 | 0.805637 | 1.212646e-49 | -8.615850e-47 |
| Msa0690500 | Msa0734430 | 0.854636 | 1.078989e-61 | -8.615850e-47 |
| Msa0690500 | Msa0738970 | 0.828163 | 1.047424e-54 | -8.615850e-47 |
| Msa0690500 | Msa0742130 | 0.800107 | 1.682715e-48 | -8.615850e-47 |
| Msa0690500 | Msa0748890 | 0.818399 | 2.000530e-52 | -8.615850e-47 |
| Msa0690500 | Msa0755570 | 0.816801 | 4.586246e-52 | -8.615850e-47 |
| Msa0690500 | Msa0761790 | 0.810572 | 1.078102e-50 | -8.615850e-47 |
| Msa0690500 | Msa0766470 | 0.808717 | 2.699458e-50 | -8.615850e-47 |
| Msa0690500 | Msa0770430 | 0.813109 | 3.023440e-51 | -8.615850e-47 |
| Msa0690500 | Msa0773080 | 0.842294 | 2.822983e-58 | -8.615850e-47 |
| Msa0690500 | Msa0783280 | 0.800605 | 1.332508e-48 | -8.615850e-47 |
| Msa0690500 | Msa0786090 | 0.810570 | 1.079289e-50 | -8.615850e-47 |
| Msa0690500 | Msa0790180 | 0.822133 | 2.787506e-53 | -8.615850e-47 |
| Msa0690500 | Msa0790830 | 0.821112 | 4.801255e-53 | -8.615850e-47 |
| Msa0690500 | Msa0803130 | 0.830464 | 2.894404e-55 | -8.615850e-47 |
| Msa0690500 | Msa0804110 | 0.853583 | 2.171625e-61 | -8.615850e-47 |
| Msa0690500 | Msa0810370 | 0.843604 | 1.264962e-58 | -8.615850e-47 |
| Msa0690500 | Msa0814760 | 0.843486 | 1.360412e-58 | -8.615850e-47 |
| Msa0690500 | Msa0819470 | 0.817887 | 2.611933e-52 | -8.615850e-47 |
| Msa0690500 | Msa0823300 | 0.827972 | 1.164448e-54 | -8.615850e-47 |
| Msa0690500 | Msa0830410 | 0.834506 | 2.881487e-56 | -8.615850e-47 |
| Msa0690500 | Msa0835030 | 0.812735 | 3.650385e-51 | -8.615850e-47 |
| Msa0690500 | Msa0841490 | 0.829892 | 3.992479e-55 | -8.615850e-47 |
| Msa0690500 | Msa0842220 | 0.819596 | 1.069140e-52 | -8.615850e-47 |
| Msa0690500 | Msa0844530 | 0.804868 | 1.757303e-49 | -8.615850e-47 |
| Msa0690500 | Msa0851870 | 0.815113 | 1.091501e-51 | -8.615850e-47 |
| Msa0690500 | Msa0859390 | 0.829390 | 5.288918e-55 | -8.615850e-47 |
| Msa0690500 | Msa0862240 | 0.802622 | 5.141496e-49 | -8.615850e-47 |
| Msa0690500 | Msa0862300 | 0.801896 | 7.251500e-49 | -8.615850e-47 |
| Msa0690500 | Msa0863440 | 0.803148 | 4.003105e-49 | -8.615850e-47 |
| Msa0690500 | Msa0893390 | 0.802345 | 5.864161e-49 | -8.615850e-47 |
| Msa0690500 | Msa0900320 | 0.872386 | 3.311018e-67 | -8.615850e-47 |
| Msa0690500 | Msa0910650 | 0.800956 | 1.130045e-48 | -8.615850e-47 |
| Msa0690500 | Msa0926860 | 0.837229 | 5.878443e-57 | -8.615850e-47 |
| Msa0690500 | Msa0946650 | 0.803089 | 4.116596e-49 | -8.615850e-47 |
| Msa0690500 | Msa0958020 | 0.824088 | 9.757115e-54 | -8.615850e-47 |
| Msa0690500 | Msa0965960 | 0.838910 | 2.171113e-57 | -8.615850e-47 |
| Msa0690500 | Msa0972730 | 0.827667 | 1.378454e-54 | -8.615850e-47 |
| Msa0690500 | Msa0988030 | 0.815202 | 1.043312e-51 | -8.615850e-47 |
| Msa0690500 | Msa0990520 | 0.820548 | 6.470786e-53 | -8.615850e-47 |
| Msa0690500 | Msa0992570 | 0.826877 | 2.131112e-54 | -8.615850e-47 |
| Msa0690500 | Msa0992590 | 0.824402 | 8.232621e-54 | -8.615850e-47 |
| Msa0690500 | Msa1000470 | 0.819001 | 1.460507e-52 | -8.615850e-47 |
| Msa0690500 | Msa1002040 | 0.805533 | 1.275181e-49 | -8.615850e-47 |
| Msa0690500 | Msa1002980 | 0.821996 | 2.999786e-53 | -8.615850e-47 |
| Msa0690500 | Msa1009790 | 0.837548 | 4.870494e-57 | -8.615850e-47 |
| Msa0690500 | Msa1011240 | 0.802727 | 4.889589e-49 | -8.615850e-47 |
| Msa0690500 | Msa1013510 | 0.808957 | 2.399383e-50 | -8.615850e-47 |
| Msa0690500 | Msa1022310 | 0.858302 | 9.043571e-63 | -8.615850e-47 |
| Msa0690500 | Msa1022390 | 0.807115 | 5.917569e-50 | -8.615850e-47 |
| Msa0690500 | Msa1027150 | 0.808215 | 3.455028e-50 | -8.615850e-47 |
| Msa0690500 | Msa1027790 | 0.836077 | 1.156217e-56 | -8.615850e-47 |
| Msa0690500 | Msa1032140 | 0.831786 | 1.370399e-55 | -8.615850e-47 |
| Msa0690500 | Msa1033120 | 0.827677 | 1.370633e-54 | -8.615850e-47 |
| Msa0690500 | Msa1037470 | 0.813379 | 2.636936e-51 | -8.615850e-47 |
| Msa0690500 | Msa1040770 | 0.823665 | 1.225733e-53 | -8.615850e-47 |
| Msa0690500 | Msa1045440 | 0.889075 | 3.351582e-73 | -8.615850e-47 |
| Msa0690500 | Msa1061180 | 0.846534 | 2.045171e-59 | -8.615850e-47 |
| Msa0690500 | Msa1067430 | 0.856031 | 4.232852e-62 | -8.615850e-47 |
| Msa0690500 | Msa1070900 | 0.800052 | 1.726523e-48 | -8.615850e-47 |
| Msa0690500 | Msa1072080 | 0.841842 | 3.717076e-58 | -8.615850e-47 |
| Msa0690500 | Msa1075120 | 0.802192 | 6.304868e-49 | -8.615850e-47 |
| Msa0690500 | Msa1084150 | 0.822312 | 2.533497e-53 | -8.615850e-47 |
| Msa0690500 | Msa1084490 | 0.804131 | 2.503349e-49 | -8.615850e-47 |
| Msa0690500 | Msa1085700 | 0.800465 | 1.422737e-48 | -8.615850e-47 |
| Msa0690500 | Msa1090230 | 0.807671 | 4.510821e-50 | -8.615850e-47 |
| Msa0690500 | Msa1097850 | 0.810124 | 1.347492e-50 | -8.615850e-47 |
| Msa0690500 | Msa1106560 | 0.812397 | 4.327594e-51 | -8.615850e-47 |
| Msa0690500 | Msa1106580 | 0.825065 | 5.744642e-54 | -8.615850e-47 |
| Msa0690500 | Msa1112610 | 0.836245 | 1.047853e-56 | -8.615850e-47 |
| Msa0690500 | Msa1118390 | 0.833623 | 4.794516e-56 | -8.615850e-47 |
| Msa0690500 | Msa1126310 | 0.820447 | 6.826357e-53 | -8.615850e-47 |
| Msa0690500 | Msa1127510 | 0.829446 | 5.125205e-55 | -8.615850e-47 |
| Msa0690500 | Msa1128350 | 0.841397 | 4.871857e-58 | -8.615850e-47 |
| Msa0690500 | Msa1130880 | 0.824422 | 8.143991e-54 | -8.615850e-47 |
| Msa0690500 | Msa1130940 | 0.828629 | 8.085401e-55 | -8.615850e-47 |
| Msa0690500 | Msa1137610 | 0.813661 | 2.286323e-51 | -8.615850e-47 |
| Msa0690500 | Msa1149760 | 0.801288 | 9.664752e-49 | -8.615850e-47 |
| Msa0690500 | Msa1149960 | 0.830221 | 3.318910e-55 | -8.615850e-47 |
| Msa0690500 | Msa1154670 | 0.803881 | 2.820897e-49 | -8.615850e-47 |
| Msa0690500 | Msa1156210 | 0.818009 | 2.451507e-52 | -8.615850e-47 |
| Msa0690500 | Msa1157680 | 0.808187 | 3.502378e-50 | -8.615850e-47 |
| Msa0690500 | Msa1159100 | 0.804724 | 1.882908e-49 | -8.615850e-47 |
| Msa0690500 | Msa1166180 | 0.822476 | 2.321422e-53 | -8.615850e-47 |
| Msa0690500 | Msa1166280 | 0.815612 | 8.456964e-52 | -8.615850e-47 |
| Msa0690500 | Msa1167160 | 0.809551 | 1.789701e-50 | -8.615850e-47 |
| Msa0690500 | Msa1171340 | 0.803125 | 4.046091e-49 | -8.615850e-47 |
| Msa0690500 | Msa1175750 | 0.824944 | 6.133792e-54 | -8.615850e-47 |
| Msa0690500 | Msa1180410 | 0.801296 | 9.626595e-49 | -8.615850e-47 |
| Msa0690500 | Msa1183390 | 0.833697 | 4.596269e-56 | -8.615850e-47 |
| Msa0690500 | Msa1183610 | 0.825758 | 3.936568e-54 | -8.615850e-47 |
| Msa0690500 | Msa1183760 | 0.879373 | 1.313963e-69 | -8.615850e-47 |
| Msa0690500 | Msa1189630 | 0.829028 | 6.470866e-55 | -8.615850e-47 |
| Msa0690500 | Msa1196910 | 0.809078 | 2.260091e-50 | -8.615850e-47 |
| Msa0690500 | Msa1197110 | 0.802933 | 4.433411e-49 | -8.615850e-47 |
| Msa0690500 | Msa1200920 | 0.811702 | 6.133354e-51 | -8.615850e-47 |
| Msa0690500 | Msa1207280 | 0.807375 | 5.213789e-50 | -8.615850e-47 |
| Msa0690500 | Msa1208630 | 0.810757 | 9.835804e-51 | -8.615850e-47 |
| Msa0690500 | Msa1208750 | 0.814442 | 1.537728e-51 | -8.615850e-47 |
| Msa0690500 | Msa1215210 | 0.851354 | 9.374613e-61 | -8.615850e-47 |
| Msa0690500 | Msa1215530 | 0.880717 | 4.361711e-70 | -8.615850e-47 |
| Msa0690500 | Msa1215770 | 0.800452 | 1.432017e-48 | -8.615850e-47 |
| Msa0690500 | Msa1219250 | 0.861342 | 1.097397e-63 | -8.615850e-47 |
| Msa0690500 | Msa1222390 | 0.805918 | 1.058608e-49 | -8.615850e-47 |
| Msa0690500 | Msa1224140 | 0.838652 | 2.532171e-57 | -8.615850e-47 |
| Msa0690500 | Msa1224150 | 0.828097 | 1.086439e-54 | -8.615850e-47 |
| Msa0690500 | Msa1228780 | 0.808248 | 3.400442e-50 | -8.615850e-47 |
| Msa0690500 | Msa1228950 | 0.850393 | 1.748289e-60 | -8.615850e-47 |
| Msa0690500 | Msa1229050 | 0.851445 | 8.834430e-61 | -8.615850e-47 |
| Msa0690500 | Msa1232010 | 0.814368 | 1.596444e-51 | -8.615850e-47 |
| Msa0690500 | Msa1235890 | 0.810712 | 1.005918e-50 | -8.615850e-47 |
| Msa0690500 | Msa1244260 | 0.827852 | 1.244080e-54 | -8.615850e-47 |
| Msa0690500 | Msa1250670 | 0.803334 | 3.663032e-49 | -8.615850e-47 |
| Msa0690500 | Msa1252730 | 0.800508 | 1.394435e-48 | -8.615850e-47 |
| Msa0690500 | Msa1254170 | 0.800078 | 1.705764e-48 | -8.615850e-47 |
| Msa0690500 | Msa1264670 | 0.827735 | 1.327404e-54 | -8.615850e-47 |
| Msa0690500 | Msa1271490 | 0.852354 | 4.876601e-61 | -8.615850e-47 |
| Msa0690500 | Msa1271510 | 0.847538 | 1.085446e-59 | -8.615850e-47 |
| Msa0690500 | Msa1271600 | 0.811899 | 5.558103e-51 | -8.615850e-47 |
| Msa0690500 | Msa1274740 | 0.818670 | 1.736388e-52 | -8.615850e-47 |
| Msa0690500 | Msa1279700 | 0.845138 | 4.896000e-59 | -8.615850e-47 |
| Msa0690500 | Msa1293530 | 0.817011 | 4.113788e-52 | -8.615850e-47 |
| Msa0690500 | Msa1300880 | 0.809803 | 1.579584e-50 | -8.615850e-47 |
| Msa0690500 | Msa1301270 | 0.803790 | 2.945823e-49 | -8.615850e-47 |
| Msa0690500 | Msa1302170 | 0.817657 | 2.942902e-52 | -8.615850e-47 |
| Msa0690500 | Msa1302750 | 0.806107 | 9.660415e-50 | -8.615850e-47 |
| Msa0690500 | Msa1305650 | 0.800047 | 1.730681e-48 | -8.615850e-47 |
| Msa0690500 | Msa1307370 | 0.828625 | 8.103070e-55 | -8.615850e-47 |
| Msa0690500 | Msa1309360 | 0.831202 | 1.907677e-55 | -8.615850e-47 |
| Msa0690500 | Msa1312730 | 0.817655 | 2.945745e-52 | -8.615850e-47 |
| Msa0690500 | Msa1315980 | 0.815969 | 7.038340e-52 | -8.615850e-47 |
| Msa0690500 | Msa1324940 | 0.848324 | 6.588856e-60 | -8.615850e-47 |
| Msa0690500 | Msa1325650 | 0.810195 | 1.300670e-50 | -8.615850e-47 |
| Msa0690500 | Msa1325980 | 0.813560 | 2.405995e-51 | -8.615850e-47 |
| Msa0690500 | Msa1331900 | 0.828951 | 6.755256e-55 | -8.615850e-47 |
| Msa0690500 | Msa1336320 | 0.831411 | 1.694558e-55 | -8.615850e-47 |
| Msa0690500 | Msa1337950 | 0.810080 | 1.376789e-50 | -8.615850e-47 |
| Msa0690500 | Msa1339250 | 0.839508 | 1.519644e-57 | -8.615850e-47 |
| Msa0690500 | Msa1352820 | 0.811270 | 7.614020e-51 | -8.615850e-47 |
| Msa0690500 | Msa1361840 | 0.806446 | 8.194286e-50 | -8.615850e-47 |
| Msa0690500 | Msa1365870 | 0.805608 | 1.229741e-49 | -8.615850e-47 |
| Msa0690500 | Msa1367600 | 0.802088 | 6.623423e-49 | -8.615850e-47 |
| Msa0690500 | Msa1367810 | 0.853647 | 2.080839e-61 | -8.615850e-47 |
| Msa0690500 | Msa1368730 | 0.830065 | 3.623080e-55 | -8.615850e-47 |
| Msa0690500 | Msa1374810 | 0.823472 | 1.360277e-53 | -8.615850e-47 |
| Msa0690500 | Msa1375630 | 0.818985 | 1.473080e-52 | -8.615850e-47 |
| Msa0690500 | Msa1376530 | 0.821544 | 3.816730e-53 | -8.615850e-47 |
| Msa0690500 | Msa1381130 | 0.808301 | 3.312148e-50 | -8.615850e-47 |
| Msa0690500 | Msa1391430 | 0.806333 | 8.657670e-50 | -8.615850e-47 |
| Msa0690500 | Msa1393200 | 0.825122 | 5.567112e-54 | -8.615850e-47 |
| Msa0690500 | Msa1393530 | 0.805772 | 1.135669e-49 | -8.615850e-47 |
| Msa0690500 | Msa1398740 | 0.823146 | 1.620675e-53 | -8.615850e-47 |
| Msa0690500 | Msa1398840 | 0.848307 | 6.661823e-60 | -8.615850e-47 |
| Msa0690500 | Msa1404370 | 0.845105 | 4.998021e-59 | -8.615850e-47 |
| Msa0690500 | Msa1404790 | 0.869385 | 3.220474e-66 | -8.615850e-47 |
| Msa0690500 | Msa1405770 | 0.803391 | 3.564670e-49 | -8.615850e-47 |
| Msa0690500 | Msa1406550 | 0.803162 | 3.976301e-49 | -8.615850e-47 |
| Msa0690500 | Msa1407710 | 0.813911 | 2.013727e-51 | -8.615850e-47 |
| Msa0690500 | Msa1410170 | 0.808430 | 3.108807e-50 | -8.615850e-47 |
| Msa0690500 | Msa1415250 | 0.847887 | 8.703220e-60 | -8.615850e-47 |
| Msa0690500 | Msa1416460 | 0.820194 | 7.803436e-53 | -8.615850e-47 |
| Msa0690500 | Msa1418600 | 0.812618 | 3.872284e-51 | -8.615850e-47 |
| Msa0690500 | Msa1422490 | 0.827525 | 1.490784e-54 | -8.615850e-47 |
| Msa0690500 | Msa1424240 | 0.850257 | 1.908844e-60 | -8.615850e-47 |
| Msa0690500 | Msa1426290 | 0.800797 | 1.217793e-48 | -8.615850e-47 |
| Msa0690500 | Msa1429390 | 0.809063 | 2.277461e-50 | -8.615850e-47 |
| Msa0690500 | Msa1430270 | 0.810849 | 9.395211e-51 | -8.615850e-47 |
| Msa0690500 | Msa1432470 | 0.805812 | 1.114180e-49 | -8.615850e-47 |
| Msa0690500 | Msa1435910 | 0.820588 | 6.336789e-53 | -8.615850e-47 |
| Msa0690500 | Msa1437150 | 0.827509 | 1.504496e-54 | -8.615850e-47 |
| Msa0690500 | Msa1437320 | 0.813173 | 2.926029e-51 | -8.615850e-47 |
| Msa0690500 | Msa1437690 | 0.833793 | 4.348629e-56 | -8.615850e-47 |
| Msa0690500 | Msa1439800 | 0.810171 | 1.316197e-50 | -8.615850e-47 |
| Msa0690500 | Msa1442030 | 0.803020 | 4.255146e-49 | -8.615850e-47 |
| Msa0690500 | Msa1442300 | 0.821796 | 3.337754e-53 | -8.615850e-47 |
| Msa0690500 | Msa1447230 | 0.823451 | 1.375746e-53 | -8.615850e-47 |
| Msa0690500 | Msa1449680 | 0.830681 | 2.560715e-55 | -8.615850e-47 |
| Msa0690500 | Msa1451840 | 0.824049 | 9.965051e-54 | -8.615850e-47 |
| Msa0690500 | Msa1458330 | 0.814255 | 1.690742e-51 | -8.615850e-47 |
| Msa0690500 | Msa1460650 | 0.816213 | 6.208525e-52 | -8.615850e-47 |
| Msa0690500 | Msa1464800 | 0.815377 | 9.538501e-52 | -8.615850e-47 |
| Msa0121650 | Msa0690500 | 0.864734 | 9.827962e-65 | -8.615850e-47 |
| Msa0122210 | Msa0690500 | 0.856438 | 3.216179e-62 | -8.615850e-47 |
| Msa0125800 | Msa0690500 | 0.842078 | 3.220739e-58 | -8.615850e-47 |
| Msa0127080 | Msa0690500 | 0.807820 | 4.193484e-50 | -8.615850e-47 |
| Msa0135980 | Msa0690500 | 0.802865 | 4.579088e-49 | -8.615850e-47 |
| Msa0137600 | Msa0690500 | 0.837704 | 4.442702e-57 | -8.615850e-47 |
| Msa0141430 | Msa0690500 | 0.824556 | 7.569951e-54 | -8.615850e-47 |
| Msa0141830 | Msa0690500 | 0.808044 | 3.758315e-50 | -8.615850e-47 |
| Msa0143490 | Msa0690500 | 0.819368 | 1.205052e-52 | -8.615850e-47 |
| Msa0144340 | Msa0690500 | 0.841238 | 5.363827e-58 | -8.615850e-47 |
| Msa0146470 | Msa0690500 | 0.836159 | 1.102033e-56 | -8.615850e-47 |
| Msa0149070 | Msa0690500 | 0.814583 | 1.431203e-51 | -8.615850e-47 |
| Msa0150210 | Msa0690500 | 0.806878 | 6.642382e-50 | -8.615850e-47 |
| Msa0151790 | Msa0690500 | 0.808110 | 3.637318e-50 | -8.615850e-47 |
| Msa0152380 | Msa0690500 | 0.842589 | 2.358130e-58 | -8.615850e-47 |
| Msa0155550 | Msa0690500 | 0.835155 | 1.978468e-56 | -8.615850e-47 |
| Msa0157020 | Msa0690500 | 0.845401 | 4.156808e-59 | -8.615850e-47 |
| Msa0157350 | Msa0690500 | 0.816698 | 4.835968e-52 | -8.615850e-47 |
| Msa0170440 | Msa0690500 | 0.840928 | 6.469929e-58 | -8.615850e-47 |
| Msa0173610 | Msa0690500 | 0.822626 | 2.142452e-53 | -8.615850e-47 |
| Msa0175280 | Msa0690500 | 0.830568 | 2.729290e-55 | -8.615850e-47 |
| Msa0177280 | Msa0690500 | 0.811056 | 8.471659e-51 | -8.615850e-47 |
| Msa0181010 | Msa0690500 | 0.801756 | 7.750330e-49 | -8.615850e-47 |
| Msa0185390 | Msa0690500 | 0.807158 | 5.795916e-50 | -8.615850e-47 |
| Msa0185550 | Msa0690500 | 0.817110 | 3.907377e-52 | -8.615850e-47 |
| Msa0194400 | Msa0690500 | 0.816495 | 5.370005e-52 | -8.615850e-47 |
| Msa0197900 | Msa0690500 | 0.819761 | 9.801927e-53 | -8.615850e-47 |
| Msa0202630 | Msa0690500 | 0.802045 | 6.757880e-49 | -8.615850e-47 |
| Msa0206080 | Msa0690500 | 0.819167 | 1.339090e-52 | -8.615850e-47 |
| Msa0206970 | Msa0690500 | 0.839211 | 1.814714e-57 | -8.615850e-47 |
| Msa0210840 | Msa0690500 | 0.801423 | 9.069130e-49 | -8.615850e-47 |
| Msa0214730 | Msa0690500 | 0.821318 | 4.302649e-53 | -8.615850e-47 |
| Msa0223280 | Msa0690500 | 0.851100 | 1.105516e-60 | -8.615850e-47 |
| Msa0225010 | Msa0690500 | 0.821692 | 3.526490e-53 | -8.615850e-47 |
| Msa0236130 | Msa0690500 | 0.822500 | 2.291313e-53 | -8.615850e-47 |
| Msa0368430 | Msa0690500 | 0.817781 | 2.759275e-52 | -8.615850e-47 |
| Msa0378000 | Msa0690500 | 0.805521 | 1.282467e-49 | -8.615850e-47 |
| Msa0379110 | Msa0690500 | 0.801125 | 1.043609e-48 | -8.615850e-47 |
| Msa0379390 | Msa0690500 | 0.837423 | 5.242774e-57 | -8.615850e-47 |
| Msa0379450 | Msa0690500 | 0.832369 | 9.833479e-56 | -8.615850e-47 |
| Msa0380420 | Msa0690500 | 0.827579 | 1.447137e-54 | -8.615850e-47 |
| Msa0382290 | Msa0690500 | 0.830085 | 3.580654e-55 | -8.615850e-47 |
| Msa0382500 | Msa0690500 | 0.811610 | 6.422230e-51 | -8.615850e-47 |
| Msa0392450 | Msa0690500 | 0.818276 | 2.133321e-52 | -8.615850e-47 |
| Msa0392480 | Msa0690500 | 0.811302 | 7.495140e-51 | -8.615850e-47 |
| Msa0393540 | Msa0690500 | 0.813908 | 2.016717e-51 | -8.615850e-47 |
| Msa0394010 | Msa0690500 | 0.837138 | 6.201767e-57 | -8.615850e-47 |
| Msa0399180 | Msa0690500 | 0.829728 | 4.374829e-55 | -8.615850e-47 |
| Msa0415050 | Msa0690500 | 0.846734 | 1.803263e-59 | -8.615850e-47 |
| Msa0415930 | Msa0690500 | 0.804593 | 2.005553e-49 | -8.615850e-47 |
| Msa0417630 | Msa0690500 | 0.855077 | 8.032832e-62 | -8.615850e-47 |
| Msa0426480 | Msa0690500 | 0.804603 | 1.995799e-49 | -8.615850e-47 |
| Msa0432680 | Msa0690500 | 0.810699 | 1.012499e-50 | -8.615850e-47 |
| Msa0434630 | Msa0690500 | 0.836686 | 8.089968e-57 | -8.615850e-47 |
| Msa0436450 | Msa0690500 | 0.800675 | 1.289575e-48 | -8.615850e-47 |
| Msa0438990 | Msa0690500 | 0.825886 | 3.669667e-54 | -8.615850e-47 |
| Msa0444340 | Msa0690500 | 0.823465 | 1.364908e-53 | -8.615850e-47 |
| Msa0448160 | Msa0690500 | 0.802387 | 5.747386e-49 | -8.615850e-47 |
| Msa0455200 | Msa0690500 | 0.800785 | 1.224298e-48 | -8.615850e-47 |
| Msa0463980 | Msa0690500 | 0.800833 | 1.197063e-48 | -8.615850e-47 |
| Msa0467880 | Msa0690500 | 0.801267 | 9.761093e-49 | -8.615850e-47 |
| Msa0476150 | Msa0690500 | 0.819133 | 1.362762e-52 | -8.615850e-47 |
| Msa0476180 | Msa0690500 | 0.801822 | 7.510840e-49 | -8.615850e-47 |
| Msa0239660 | Msa0690500 | 0.825930 | 3.582994e-54 | -8.615850e-47 |
| Msa0247310 | Msa0690500 | 0.851981 | 6.229053e-61 | -8.615850e-47 |
| Msa0251110 | Msa0690500 | 0.801142 | 1.035408e-48 | -8.615850e-47 |
| Msa0257130 | Msa0690500 | 0.821431 | 4.052439e-53 | -8.615850e-47 |
| Msa0259980 | Msa0690500 | 0.841161 | 5.620984e-58 | -8.615850e-47 |
| Msa0261440 | Msa0690500 | 0.818110 | 2.325794e-52 | -8.615850e-47 |
| Msa0266080 | Msa0690500 | 0.813144 | 2.969972e-51 | -8.615850e-47 |
| Msa0269830 | Msa0690500 | 0.832766 | 7.835970e-56 | -8.615850e-47 |
| Msa0277640 | Msa0690500 | 0.821682 | 3.545458e-53 | -8.615850e-47 |
| Msa0280120 | Msa0690500 | 0.824463 | 7.962142e-54 | -8.615850e-47 |
| Msa0280140 | Msa0690500 | 0.815672 | 8.198753e-52 | -8.615850e-47 |
| Msa0284260 | Msa0690500 | 0.815523 | 8.851484e-52 | -8.615850e-47 |
| Msa0296000 | Msa0690500 | 0.804200 | 2.421641e-49 | -8.615850e-47 |
| Msa0304870 | Msa0690500 | 0.821684 | 3.543082e-53 | -8.615850e-47 |
| Msa0307460 | Msa0690500 | 0.850976 | 1.198760e-60 | -8.615850e-47 |
| Msa0308430 | Msa0690500 | 0.829886 | 4.004088e-55 | -8.615850e-47 |
| Msa0313550 | Msa0690500 | 0.824642 | 7.226423e-54 | -8.615850e-47 |
| Msa0314640 | Msa0690500 | 0.821406 | 4.107708e-53 | -8.615850e-47 |
| Msa0314790 | Msa0690500 | 0.805847 | 1.095498e-49 | -8.615850e-47 |
| Msa0317260 | Msa0690500 | 0.826050 | 3.356114e-54 | -8.615850e-47 |
| Msa0334020 | Msa0690500 | 0.801071 | 1.070535e-48 | -8.615850e-47 |
| Msa0334780 | Msa0690500 | 0.833551 | 4.996526e-56 | -8.615850e-47 |
| Msa0335740 | Msa0690500 | 0.816383 | 5.690397e-52 | -8.615850e-47 |
| Msa0339860 | Msa0690500 | 0.816679 | 4.883785e-52 | -8.615850e-47 |
| Msa0341260 | Msa0690500 | 0.823378 | 1.430913e-53 | -8.615850e-47 |
| Msa0342620 | Msa0690500 | 0.813373 | 2.644773e-51 | -8.615850e-47 |
| Msa0343920 | Msa0690500 | 0.837934 | 3.876530e-57 | -8.615850e-47 |
| Msa0347400 | Msa0690500 | 0.816291 | 5.966367e-52 | -8.615850e-47 |
| Msa0349000 | Msa0690500 | 0.801188 | 1.012919e-48 | -8.615850e-47 |
| Msa0353890 | Msa0690500 | 0.800513 | 1.391145e-48 | -8.615850e-47 |
| Msa0354490 | Msa0690500 | 0.825493 | 4.548397e-54 | -8.615850e-47 |
| Msa0362840 | Msa0690500 | 0.807804 | 4.225674e-50 | -8.615850e-47 |
| Msa0485280 | Msa0690500 | 0.811643 | 6.317798e-51 | -8.615850e-47 |
| Msa0486200 | Msa0690500 | 0.807453 | 5.017797e-50 | -8.615850e-47 |
| Msa0487560 | Msa0690500 | 0.808898 | 2.470028e-50 | -8.615850e-47 |
| Msa0487620 | Msa0690500 | 0.817009 | 4.118599e-52 | -8.615850e-47 |
| Msa0488830 | Msa0690500 | 0.802256 | 6.114894e-49 | -8.615850e-47 |
| Msa0504740 | Msa0690500 | 0.806212 | 9.178547e-50 | -8.615850e-47 |
| Msa0510230 | Msa0690500 | 0.800314 | 1.527755e-48 | -8.615850e-47 |
| Msa0512130 | Msa0690500 | 0.801925 | 7.153534e-49 | -8.615850e-47 |
| Msa0519200 | Msa0690500 | 0.815254 | 1.015989e-51 | -8.615850e-47 |
| Msa0521780 | Msa0690500 | -0.824881 | 6.346127e-54 | -8.615850e-47 |
| Msa0524020 | Msa0690500 | 0.816269 | 6.033737e-52 | -8.615850e-47 |
| Msa0526130 | Msa0690500 | 0.817178 | 3.773515e-52 | -8.615850e-47 |
| Msa0526700 | Msa0690500 | 0.813540 | 2.430849e-51 | -8.615850e-47 |
| Msa0528870 | Msa0690500 | 0.810752 | 9.857175e-51 | -8.615850e-47 |
| Msa0532840 | Msa0690500 | 0.812371 | 4.384844e-51 | -8.615850e-47 |
| Msa0533010 | Msa0690500 | 0.813770 | 2.163757e-51 | -8.615850e-47 |
| Msa0536170 | Msa0690500 | 0.801985 | 6.952048e-49 | -8.615850e-47 |
| Msa0546740 | Msa0690500 | 0.806058 | 9.890383e-50 | -8.615850e-47 |
| Msa0550280 | Msa0690500 | 0.802299 | 5.992514e-49 | -8.615850e-47 |
| Msa0550720 | Msa0690500 | 0.812895 | 3.367926e-51 | -8.615850e-47 |
| Msa0567290 | Msa0690500 | 0.837142 | 6.187026e-57 | -8.615850e-47 |
| Msa0577110 | Msa0690500 | 0.853151 | 2.888806e-61 | -8.615850e-47 |
| Msa0578900 | Msa0690500 | 0.807627 | 4.608704e-50 | -8.615850e-47 |
| Msa0581460 | Msa0690500 | 0.830492 | 2.848419e-55 | -8.615850e-47 |
| Msa0598980 | Msa0690500 | 0.810690 | 1.016954e-50 | -8.615850e-47 |
| Msa0600390 | Msa0690500 | 0.806664 | 7.369823e-50 | -8.615850e-47 |
| Msa0602670 | Msa0690500 | 0.800872 | 1.175609e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690500 | MtrunA17_Chr4g0039081 | 99.187 | 369 | 3 | 0 | 1 | 369 | 1 | 369 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0690500 | AT5G08280.1 | 80.645 | 341 | 55 | 2 | 37 | 369 | 45 | 382 | 0.0 | 565 |
Find 124 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGGCAGCCTTGGCATTT+TGG | 0.148106 | 4_4:-58313730 | Msa0690500:three_prime_UTR |
| ATTGCAATTGGCAATGTAAT+TGG | 0.182846 | 4_4:-58317111 | Msa0690500:five_prime_UTR |
| CTTCCTTTCAACATCCTTCT+TGG | 0.231769 | 4_4:-58313747 | Msa0690500:three_prime_UTR |
| ATAGATGAAGCACTCATAAA+TGG | 0.266891 | 4_4:-58315830 | Msa0690500:CDS |
| GAAATTTCAATAGGTGATTC+TGG | 0.276568 | 4_4:-58313995 | Msa0690500:three_prime_UTR |
| CTACCAGCTGGAAGTGTTAT+TGG | 0.287418 | 4_4:-58315671 | Msa0690500:CDS |
| TTTCAACTGAACTCCTTATC+AGG | 0.292726 | 4_4:-58314116 | Msa0690500:three_prime_UTR |
| AATTCTAATAATCGCAGTTT+TGG | 0.297866 | 4_4:+58316760 | None:intergenic |
| GGTTGTCAAAGCTACCTTAT+TGG | 0.316380 | 4_4:-58315078 | Msa0690500:CDS |
| CTGATACGACATTTGGAAAA+AGG | 0.322162 | 4_4:+58316818 | None:intergenic |
| CTCTAAAACTTCACTATTGC+AGG | 0.327602 | 4_4:+58314033 | None:intergenic |
| TCTTGCCGAACGCCTATTGC+GGG | 0.331921 | 4_4:-58314512 | Msa0690500:CDS |
| GGCTATTCCAATTGCACCTT+GGG | 0.335647 | 4_4:+58314974 | None:intergenic |
| GATGGAAATTGCTTGTTTAG+AGG | 0.343657 | 4_4:-58314470 | Msa0690500:CDS |
| GAAGGATTGGAAGGTGTAGA+AGG | 0.351735 | 4_4:+58316890 | None:intergenic |
| GTGAGAATATATAATGAATA+AGG | 0.352661 | 4_4:+58313769 | None:intergenic |
| AGTGTTGAAACTTATAATCT+AGG | 0.369974 | 4_4:+58314214 | None:intergenic |
| CAGTCCAGCTAGAGCCAATA+AGG | 0.371368 | 4_4:+58315064 | None:intergenic |
| AACATCCTTCTTGGCAGCCT+TGG | 0.372897 | 4_4:-58313738 | Msa0690500:three_prime_UTR |
| TAGGAGTAATGATGATAAAA+TGG | 0.379356 | 4_4:-58314949 | Msa0690500:intron |
| AAAACTGCGATTATTAGAAT+TGG | 0.380075 | 4_4:-58316758 | Msa0690500:CDS |
| CTTCTTTCTCGAGCTGGACC+TGG | 0.382803 | 4_4:-58314256 | Msa0690500:CDS |
| GAGAAGGAAAGGGGAAGGAT+TGG | 0.401621 | 4_4:+58316877 | None:intergenic |
| ATAAGCATAAGGACCGATTC+TGG | 0.403424 | 4_4:+58314318 | None:intergenic |
| AGAAAGAATATCAATAAATC+TGG | 0.405275 | 4_4:-58313652 | Msa0690500:three_prime_UTR |
| CTTAACACGGAAATTTCAAT+AGG | 0.406635 | 4_4:-58314004 | Msa0690500:three_prime_UTR |
| TTAGAGCAGTCCACTAGCTT+TGG | 0.407368 | 4_4:-58316008 | Msa0690500:intron |
| TTGCAATTGGCAATGTAATT+GGG | 0.414516 | 4_4:-58317110 | Msa0690500:five_prime_UTR |
| AAGAGCCTTCCTTACGACTT+TGG | 0.415933 | 4_4:-58314540 | Msa0690500:CDS |
| GCTGTTGCCCAAGGTGCAAT+TGG | 0.417047 | 4_4:-58314981 | Msa0690500:CDS |
| TAGATGAAGCACTCATAAAT+GGG | 0.423935 | 4_4:-58315829 | Msa0690500:CDS |
| TTTATCATCATTACTCCTAC+AGG | 0.431013 | 4_4:+58314953 | None:intergenic |
| TTCATACCACGGGTTCCATC+GGG | 0.433712 | 4_4:+58314434 | None:intergenic |
| TTGAAATTTCCGTGTTAAGC+GGG | 0.445242 | 4_4:+58314008 | None:intergenic |
| GGAAGCTCTGATACGACATT+TGG | 0.445537 | 4_4:+58316811 | None:intergenic |
| TGAACTATTTCACACTCAAA+TGG | 0.448638 | 4_4:-58316948 | Msa0690500:exon |
| ACATATAATAAGATTGCAAT+TGG | 0.449693 | 4_4:-58317123 | None:intergenic |
| CTGCTAGCATACCCCGCAAT+AGG | 0.459589 | 4_4:+58314500 | None:intergenic |
| AGAATGCAGAAGAGGAAGAA+AGG | 0.466442 | 4_4:+58316918 | None:intergenic |
| AATCTGAATAGCCCCTTCTT+CGG | 0.467642 | 4_4:+58315934 | None:intergenic |
| GAGGAGCTTCTTTCTCGAGC+TGG | 0.476446 | 4_4:-58314262 | Msa0690500:CDS |
| CATACAGAGTTAGCCGAAGA+AGG | 0.479546 | 4_4:-58315947 | Msa0690500:CDS |
| GCCTTCCTTACGACTTTGGA+TGG | 0.480690 | 4_4:-58314536 | Msa0690500:CDS |
| ACAACAATTTGATCCTGATA+AGG | 0.485056 | 4_4:+58314103 | None:intergenic |
| ATCATATCATCATAAGCATA+AGG | 0.485218 | 4_4:+58314307 | None:intergenic |
| GTGCTTGAAACTTCCAGAAT+CGG | 0.486575 | 4_4:-58314331 | Msa0690500:CDS |
| TATAAGTTTCAACACTCAAT+CGG | 0.487974 | 4_4:-58314207 | Msa0690500:three_prime_UTR |
| CAATAGGTGATTCTGGACTC+TGG | 0.489496 | 4_4:-58313988 | Msa0690500:three_prime_UTR |
| ATTGCACCTTGGGCAACAGC+TGG | 0.489725 | 4_4:+58314984 | None:intergenic |
| GTTCATACCACGGGTTCCAT+CGG | 0.490215 | 4_4:+58314433 | None:intergenic |
| GAATGCAGAAGAGGAAGAAA+GGG | 0.492559 | 4_4:+58316919 | None:intergenic |
| GATGGGTAAGGATGCGGGTG+AGG | 0.498552 | 4_4:-58314281 | Msa0690500:CDS |
| GCTACCTTATTGGCTCTAGC+TGG | 0.499498 | 4_4:-58315068 | Msa0690500:CDS |
| ATGAAGATGGGTAAGGATGC+GGG | 0.500619 | 4_4:-58314286 | Msa0690500:CDS |
| CAAGAAGAACTGAGAAGGAA+AGG | 0.502363 | 4_4:+58316866 | None:intergenic |
| AAGAAGAACTGAGAAGGAAA+GGG | 0.502979 | 4_4:+58316867 | None:intergenic |
| AGGAAGAGAGAATGCAGAAG+AGG | 0.515566 | 4_4:+58316910 | None:intergenic |
| ATTGGCAATGTAATTGGGTA+AGG | 0.515612 | 4_4:-58317105 | Msa0690500:five_prime_UTR |
| AAATGCCAAGGCTGCCAAGA+AGG | 0.516842 | 4_4:+58313733 | None:intergenic |
| AGGAAAGGGGAAGGATTGGA+AGG | 0.521629 | 4_4:+58316881 | None:intergenic |
| ATCTCTAAGATAGAGCTTGT+GGG | 0.525074 | 4_4:+58317077 | None:intergenic |
| TCCTCTCGTGGAAGGTTGCA+TGG | 0.526187 | 4_4:+58315740 | None:intergenic |
| AGGCTATTCCAATTGCACCT+TGG | 0.526245 | 4_4:+58314973 | None:intergenic |
| CGTAAGGAAGGCTCTTTCAC+AGG | 0.530222 | 4_4:+58314547 | None:intergenic |
| TTCTTGCCGAACGCCTATTG+CGG | 0.530390 | 4_4:-58314513 | Msa0690500:CDS |
| GATCTCTAAGATAGAGCTTG+TGG | 0.534871 | 4_4:+58317076 | None:intergenic |
| GAACTGAGAAGGAAAGGGGA+AGG | 0.541355 | 4_4:+58316872 | None:intergenic |
| TCCGTGGAAATGTGCAAACA+AGG | 0.548138 | 4_4:-58315121 | Msa0690500:CDS |
| CTCTGACATCCTCTCGTGGA+AGG | 0.548713 | 4_4:+58315732 | None:intergenic |
| TCACTAGCTGATCTACCAGC+TGG | 0.549246 | 4_4:-58315683 | Msa0690500:CDS |
| TCGCAACCGCTTGCAGACAT+AGG | 0.549665 | 4_4:-58315878 | Msa0690500:CDS |
| GCCTTGTTTGCACATTTCCA+CGG | 0.551589 | 4_4:+58315120 | None:intergenic |
| CTCAATCGGTAACACAGGTA+TGG | 0.555070 | 4_4:-58314193 | Msa0690500:three_prime_UTR |
| TTAGAATTGGTACTAGAGGA+AGG | 0.555106 | 4_4:-58316745 | Msa0690500:intron |
| GCAACAATTAAAATATATGT+TGG | 0.555727 | 4_4:-58313956 | Msa0690500:three_prime_UTR |
| ATACAGAGTTAGCCGAAGAA+GGG | 0.556716 | 4_4:-58315946 | Msa0690500:CDS |
| GATGAAGATGGGTAAGGATG+CGG | 0.558385 | 4_4:-58314287 | Msa0690500:CDS |
| CAGTCCACTAGCTTTGGCTC+AGG | 0.560597 | 4_4:-58316002 | Msa0690500:CDS |
| CAACCGCTTGCAGACATAGG+TGG | 0.565596 | 4_4:-58315875 | Msa0690500:CDS |
| TATGATGATATGATGAAGAT+GGG | 0.565615 | 4_4:-58314298 | Msa0690500:CDS |
| TTATGATGATATGATGAAGA+TGG | 0.567786 | 4_4:-58314299 | Msa0690500:CDS |
| CATACCCCGCAATAGGCGTT+CGG | 0.571732 | 4_4:+58314507 | None:intergenic |
| CACGAGCTTACACTTAGAGA+TGG | 0.571883 | 4_4:+58315605 | None:intergenic |
| GCCATGCAACCTTCCACGAG+AGG | 0.571886 | 4_4:-58315741 | Msa0690500:CDS |
| ATGGTAGGTTGTATTATCAG+AGG | 0.575091 | 4_4:-58314174 | Msa0690500:three_prime_UTR |
| GCAATGTAATTGGGTAAGGT+AGG | 0.575938 | 4_4:-58317101 | Msa0690500:five_prime_UTR |
| TGTGCCTGAGCCAAAGCTAG+TGG | 0.577115 | 4_4:+58315998 | None:intergenic |
| ACCATCCAAAGTCGTAAGGA+AGG | 0.584751 | 4_4:+58314535 | None:intergenic |
| ATTATTAGAATTGGTACTAG+AGG | 0.585168 | 4_4:-58316749 | Msa0690500:CDS |
| AACCGCTTGCAGACATAGGT+GGG | 0.586462 | 4_4:-58315874 | Msa0690500:CDS |
| AGAATATATAATGAATAAGG+AGG | 0.587601 | 4_4:+58313772 | None:intergenic |
| GACAATATGTAGCATTCTGT+AGG | 0.589574 | 4_4:-58313812 | Msa0690500:three_prime_UTR |
| AAGAACCATCCAAAGTCGTA+AGG | 0.589630 | 4_4:+58314531 | None:intergenic |
| GCTTGCAGACATAGGTGGGA+AGG | 0.591309 | 4_4:-58315870 | Msa0690500:CDS |
| TTTAGAGTTCCCGCTTAACA+CGG | 0.601179 | 4_4:-58314017 | Msa0690500:three_prime_UTR |
| CGTCTGTTGCTCAACAGCAA+CGG | 0.602185 | 4_4:+58316790 | None:intergenic |
| AGGCTTAGAAAACTAAGTGA+GGG | 0.602676 | 4_4:-58315101 | Msa0690500:CDS |
| ATGCTTCCAGCTGTTGCCCA+AGG | 0.607443 | 4_4:-58314990 | Msa0690500:CDS |
| AGGGACAAGAAGAACTGAGA+AGG | 0.608902 | 4_4:+58316861 | None:intergenic |
| GGCTTAGAAAACTAAGTGAG+GGG | 0.614093 | 4_4:-58315100 | Msa0690500:CDS |
| TGATATGATGAAGATGGGTA+AGG | 0.614306 | 4_4:-58314293 | Msa0690500:CDS |
| GCATCTCTGACATCCTCTCG+TGG | 0.614964 | 4_4:+58315728 | None:intergenic |
| TTCCCACCTATGTCTGCAAG+CGG | 0.617157 | 4_4:+58315872 | None:intergenic |
| CACTTAGAGATGGATATCTG+TGG | 0.621615 | 4_4:+58315615 | None:intergenic |
| AGAAGAACTGAGAAGGAAAG+GGG | 0.621960 | 4_4:+58316868 | None:intergenic |
| TACAGAGTTAGCCGAAGAAG+GGG | 0.622163 | 4_4:-58315945 | Msa0690500:CDS |
| CTTGCAGACATAGGTGGGAA+GGG | 0.623209 | 4_4:-58315869 | Msa0690500:CDS |
| CATACCACGGGTTCCATCGG+GGG | 0.623605 | 4_4:+58314436 | None:intergenic |
| CTTGCCGAACGCCTATTGCG+GGG | 0.633673 | 4_4:-58314511 | Msa0690500:CDS |
| CTGCCAAGAAGGATGTTGAA+AGG | 0.634850 | 4_4:+58313744 | None:intergenic |
| GTACCAATAACACTTCCAGC+TGG | 0.636804 | 4_4:+58315668 | None:intergenic |
| AAGGCTTAGAAAACTAAGTG+AGG | 0.637139 | 4_4:-58315102 | Msa0690500:CDS |
| CAACACTCAATCGGTAACAC+AGG | 0.641417 | 4_4:-58314198 | Msa0690500:three_prime_UTR |
| ATTGAAATTTCCGTGTTAAG+CGG | 0.643902 | 4_4:+58314007 | None:intergenic |
| CAGGTGCAAGATAATTTCCG+TGG | 0.647977 | 4_4:-58315137 | Msa0690500:CDS |
| ATACAACAGCCAAAATGCCA+AGG | 0.650484 | 4_4:+58313721 | None:intergenic |
| ATCGGTAACACAGGTATGGT+AGG | 0.650681 | 4_4:-58314189 | Msa0690500:three_prime_UTR |
| GTGCAATTGGAATAGCCTGT+AGG | 0.651535 | 4_4:-58314968 | Msa0690500:CDS |
| TATGCTAGCAGAGACAAGGA+TGG | 0.659151 | 4_4:-58314488 | Msa0690500:CDS |
| AGATGAAGCACTCATAAATG+GGG | 0.661644 | 4_4:-58315828 | Msa0690500:CDS |
| GGGGTATGCTAGCAGAGACA+AGG | 0.662362 | 4_4:-58314492 | Msa0690500:CDS |
| TTAGAGATGGATATCTGTGG+AGG | 0.669578 | 4_4:+58315618 | None:intergenic |
| TCATACCACGGGTTCCATCG+GGG | 0.679110 | 4_4:+58314435 | None:intergenic |
| GCTTAGAAAACTAAGTGAGG+GGG | 0.696029 | 4_4:-58315099 | Msa0690500:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAAATATTACAAAAATT+TGG | + | chr4_4:58316618-58316637 | None:intergenic | 10.0% |
| !!! | TTTTTTGGCATTTATTTTAA+TGG | - | chr4_4:58314169-58314188 | Msa0690500:three_prime_UTR | 15.0% |
| !!! | TTTTTGGCATTTATTTTAAT+GGG | - | chr4_4:58314170-58314189 | Msa0690500:three_prime_UTR | 15.0% |
| !! | TAAAACAAAATACTGATATA+TGG | + | chr4_4:58314358-58314377 | None:intergenic | 15.0% |
| !!! | TTAGAAGATAATTTTAGAAA+GGG | - | chr4_4:58314431-58314450 | Msa0690500:intron | 15.0% |
| !! | AATCATTTAACTAATAGTAT+AGG | + | chr4_4:58314601-58314620 | None:intergenic | 15.0% |
| !! | ATTGTAATAATAAAAACAAC+CGG | - | chr4_4:58314759-58314778 | Msa0690500:intron | 15.0% |
| !!! | AAACCATAATCATTTTTTAT+TGG | - | chr4_4:58315141-58315160 | Msa0690500:intron | 15.0% |
| !!! | AACCATAATCATTTTTTATT+GGG | - | chr4_4:58315142-58315161 | Msa0690500:intron | 15.0% |
| !! | AATATAAATTCTCAGATATT+GGG | + | chr4_4:58315947-58315966 | None:intergenic | 15.0% |
| !!! | TCAAATTGTTGTATTTTATT+AGG | - | chr4_4:58316581-58316600 | Msa0690500:intron | 15.0% |
| !!! | TTTGCAATTTCAAAATTTTT+AGG | + | chr4_4:58316793-58316812 | None:intergenic | 15.0% |
| !!! | AATTTTGAAATTGCAAAAAA+AGG | - | chr4_4:58316796-58316815 | Msa0690500:CDS | 15.0% |
| !!! | ATTTTGAAATTGCAAAAAAA+GGG | - | chr4_4:58316797-58316816 | Msa0690500:CDS | 15.0% |
| !!! | CTCAAATTTGCATTTTTTTT+TGG | - | chr4_4:58314154-58314173 | Msa0690500:three_prime_UTR | 20.0% |
| !!! | ATTGTTATTGTCAAAAGAAA+AGG | - | chr4_4:58314279-58314298 | Msa0690500:CDS | 20.0% |
| !!! | TTGTTATTGTCAAAAGAAAA+GGG | - | chr4_4:58314280-58314299 | Msa0690500:CDS | 20.0% |
| !!! | CTTAGAAGATAATTTTAGAA+AGG | - | chr4_4:58314430-58314449 | Msa0690500:intron | 20.0% |
| !! | TAACAAAAGAAACCAAATAT+GGG | + | chr4_4:58314548-58314567 | None:intergenic | 20.0% |
| !! | ATAACAAAAGAAACCAAATA+TGG | + | chr4_4:58314549-58314568 | None:intergenic | 20.0% |
| !!! | ATATTTGGTTTCTTTTGTTA+TGG | - | chr4_4:58314548-58314567 | Msa0690500:CDS | 20.0% |
| !! | ACAAGAAAAATAAAGAAAGA+AGG | + | chr4_4:58315397-58315416 | None:intergenic | 20.0% |
| !!! | CACTTTTTGTGTTTAAATTT+TGG | - | chr4_4:58315799-58315818 | Msa0690500:CDS | 20.0% |
| !! | ATATAAATTCTCAGATATTG+GGG | + | chr4_4:58315946-58315965 | None:intergenic | 20.0% |
| !! | CAATATAAATTCTCAGATAT+TGG | + | chr4_4:58315948-58315967 | None:intergenic | 20.0% |
| !!! | ATCTGAAATATTTCAATTCA+AGG | - | chr4_4:58315983-58316002 | Msa0690500:CDS | 20.0% |
| !! | TATTAACTATTGAAAAAACC+AGG | + | chr4_4:58316438-58316457 | None:intergenic | 20.0% |
| !!! | TATTATCAGAGGTTTTAAAA+TGG | - | chr4_4:58316510-58316529 | Msa0690500:intron | 20.0% |
| !!! | ATTATCAGAGGTTTTAAAAT+GGG | - | chr4_4:58316511-58316530 | Msa0690500:intron | 20.0% |
| !! | TTGAAAAAGAATAACAAACT+AGG | + | chr4_4:58316543-58316562 | None:intergenic | 20.0% |
| !! | GCAACAATTAAAATATATGT+TGG | - | chr4_4:58316717-58316736 | Msa0690500:intron | 20.0% |
| !!! | CTTCAATAGATAACATTTTT+GGG | + | chr4_4:58316832-58316851 | None:intergenic | 20.0% |
| !!! | TCTTCAATAGATAACATTTT+TGG | + | chr4_4:58316833-58316852 | None:intergenic | 20.0% |
| !! | AGAATATATAATGAATAAGG+AGG | + | chr4_4:58316904-58316923 | None:intergenic | 20.0% |
| !! | GTGAGAATATATAATGAATA+AGG | + | chr4_4:58316907-58316926 | None:intergenic | 20.0% |
| !! | AGAAAGAATATCAATAAATC+TGG | - | chr4_4:58317021-58317040 | Msa0690500:five_prime_UTR | 20.0% |
| !!! | GAATTTATTTTTTTCAAGCA+AGG | - | chr4_4:58317086-58317105 | Msa0690500:five_prime_UTR | 20.0% |
| !! | AATTCTAATAATCGCAGTTT+TGG | + | chr4_4:58313916-58313935 | None:intergenic | 25.0% |
| ! | AAAACTGCGATTATTAGAAT+TGG | - | chr4_4:58313915-58313934 | Msa0690500:three_prime_UTR | 25.0% |
| ! | ATTATTAGAATTGGTACTAG+AGG | - | chr4_4:58313924-58313943 | Msa0690500:three_prime_UTR | 25.0% |
| !!! | TTTGACTTTTTTTATGCTTC+TGG | - | chr4_4:58314024-58314043 | Msa0690500:three_prime_UTR | 25.0% |
| !!! | TTGACTTTTTTTATGCTTCT+GGG | - | chr4_4:58314025-58314044 | Msa0690500:three_prime_UTR | 25.0% |
| ! | TGTTATTGTCAAAAGAAAAG+GGG | - | chr4_4:58314281-58314300 | Msa0690500:CDS | 25.0% |
| ! | AAGAAAATCAATCCCATATT+TGG | - | chr4_4:58314533-58314552 | Msa0690500:CDS | 25.0% |
| ! | ATTATGAATGCTTTCATTGT+TGG | - | chr4_4:58314618-58314637 | Msa0690500:intron | 25.0% |
| ! | GTTTGATGTAAAAACCAATA+TGG | + | chr4_4:58315125-58315144 | None:intergenic | 25.0% |
| ! | AGCCCAATAAAAAATGATTA+TGG | + | chr4_4:58315147-58315166 | None:intergenic | 25.0% |
| !!! | ATAATCATTTTTTATTGGGC+TGG | - | chr4_4:58315146-58315165 | Msa0690500:intron | 25.0% |
| ! | AGCATTTAATGCATTCATAA+TGG | - | chr4_4:58315184-58315203 | Msa0690500:intron | 25.0% |
| ! | ACAGACAATAGCTATATAAA+AGG | + | chr4_4:58315360-58315379 | None:intergenic | 25.0% |
| !! | AAAATAAAGAAAGAAGGCAT+GGG | + | chr4_4:58315391-58315410 | None:intergenic | 25.0% |
| ! | AAAAATAAAGAAAGAAGGCA+TGG | + | chr4_4:58315392-58315411 | None:intergenic | 25.0% |
| !!! | ATTTCTGTCATTTAGCTTTA+TGG | - | chr4_4:58315464-58315483 | Msa0690500:intron | 25.0% |
| ! | AAAAATCAATAAGAATCCGT+CGG | + | chr4_4:58315494-58315513 | None:intergenic | 25.0% |
| ! | CAACCTATAATTATAATCTC+AGG | - | chr4_4:58315517-58315536 | Msa0690500:intron | 25.0% |
| ! | TAGGAGTAATGATGATAAAA+TGG | - | chr4_4:58315724-58315743 | Msa0690500:CDS | 25.0% |
| !! | CAATCAAAAGTTAGAAGTAT+AGG | - | chr4_4:58315863-58315882 | Msa0690500:CDS | 25.0% |
| !!! | CAGTTTAGTTTTACCATATT+TGG | - | chr4_4:58316037-58316056 | Msa0690500:intron | 25.0% |
| ! | ATCATATCATCATAAGCATA+AGG | + | chr4_4:58316369-58316388 | None:intergenic | 25.0% |
| ! | TTATGATGATATGATGAAGA+TGG | - | chr4_4:58316374-58316393 | Msa0690500:intron | 25.0% |
| ! | TATGATGATATGATGAAGAT+GGG | - | chr4_4:58316375-58316394 | Msa0690500:intron | 25.0% |
| !! | AGTGTTGAAACTTATAATCT+AGG | + | chr4_4:58316462-58316481 | None:intergenic | 25.0% |
| ! | TATAAGTTTCAACACTCAAT+CGG | - | chr4_4:58316466-58316485 | Msa0690500:intron | 25.0% |
| !! | GTTGTATTTTATTAGGTGAT+TGG | - | chr4_4:58316588-58316607 | Msa0690500:intron | 25.0% |
| ATTGCAATTGGCAATGTAAT+TGG | - | chr4_4:58313562-58313581 | Msa0690500:three_prime_UTR | 30.0% | |
| TTGCAATTGGCAATGTAATT+GGG | - | chr4_4:58313563-58313582 | Msa0690500:three_prime_UTR | 30.0% | |
| TGAACTATTTCACACTCAAA+TGG | - | chr4_4:58313725-58313744 | Msa0690500:three_prime_UTR | 30.0% | |
| !!! | AATTCACTCTTTTTTGCTTC+TGG | - | chr4_4:58313952-58313971 | Msa0690500:three_prime_UTR | 30.0% |
| !!! | ATTCACTCTTTTTTGCTTCT+GGG | - | chr4_4:58313953-58313972 | Msa0690500:three_prime_UTR | 30.0% |
| ! | CTTCTGGGTTCTTTTTATAT+TGG | - | chr4_4:58314040-58314059 | Msa0690500:three_prime_UTR | 30.0% |
| ! | ATTTCATTCTTTTCTGCTTC+TGG | - | chr4_4:58314095-58314114 | Msa0690500:three_prime_UTR | 30.0% |
| ! | TTTCATTCTTTTCTGCTTCT+GGG | - | chr4_4:58314096-58314115 | Msa0690500:three_prime_UTR | 30.0% |
| ATGCAAATTTGAGCTAAAGT+TGG | + | chr4_4:58314147-58314166 | None:intergenic | 30.0% | |
| !!! | TGGCATTTATTTTAATGGGT+TGG | - | chr4_4:58314174-58314193 | Msa0690500:three_prime_UTR | 30.0% |
| TTAAATGCTTGCAATCATCT+TGG | - | chr4_4:58314471-58314490 | Msa0690500:CDS | 30.0% | |
| ! | ACTGCTCTAAATGTAAACAT+AGG | + | chr4_4:58314655-58314674 | None:intergenic | 30.0% |
| ! | ATAGATGAAGCACTCATAAA+TGG | - | chr4_4:58314843-58314862 | Msa0690500:intron | 30.0% |
| ! | TAGATGAAGCACTCATAAAT+GGG | - | chr4_4:58314844-58314863 | Msa0690500:intron | 30.0% |
| ATATGGAAGACACTAAACAA+TGG | + | chr4_4:58315108-58315127 | None:intergenic | 30.0% | |
| TTGTTTAGTGTCTTCCATAT+TGG | - | chr4_4:58315108-58315127 | Msa0690500:CDS | 30.0% | |
| ACCATTAACAACATGGATAA+TGG | - | chr4_4:58315253-58315272 | Msa0690500:intron | 30.0% | |
| ACCATTATCCATGTTGTTAA+TGG | + | chr4_4:58315257-58315276 | None:intergenic | 30.0% | |
| GCACCTGAGATTATAATTAT+AGG | + | chr4_4:58315523-58315542 | None:intergenic | 30.0% | |
| TTTATCATCATTACTCCTAC+AGG | + | chr4_4:58315723-58315742 | None:intergenic | 30.0% | |
| ! | TTTTCAACAAGTCAGACAAT+AGG | + | chr4_4:58315779-58315798 | None:intergenic | 30.0% |
| TTGACTATATTGTGAGCTAT+TGG | - | chr4_4:58315833-58315852 | Msa0690500:CDS | 30.0% | |
| AATTTATTCGAACCATGCAA+TGG | - | chr4_4:58315912-58315931 | Msa0690500:CDS | 30.0% | |
| TCTGAGAATTTATATTGACG+AGG | - | chr4_4:58315951-58315970 | Msa0690500:CDS | 30.0% | |
| TATTTCAATTCAAGGAGCAA+AGG | - | chr4_4:58315991-58316010 | Msa0690500:CDS | 30.0% | |
| ACAACAATTTGATCCTGATA+AGG | + | chr4_4:58316573-58316592 | None:intergenic | 30.0% | |
| ATTGAAATTTCCGTGTTAAG+CGG | + | chr4_4:58316669-58316688 | None:intergenic | 30.0% | |
| CTTAACACGGAAATTTCAAT+AGG | - | chr4_4:58316669-58316688 | Msa0690500:intron | 30.0% | |
| GAAATTTCAATAGGTGATTC+TGG | - | chr4_4:58316678-58316697 | Msa0690500:intron | 30.0% | |
| TGAAATTGCAAAAAAAGGGT+TGG | - | chr4_4:58316801-58316820 | Msa0690500:CDS | 30.0% | |
| ATTGGCAATGTAATTGGGTA+AGG | - | chr4_4:58313568-58313587 | Msa0690500:three_prime_UTR | 35.0% | |
| !! | ATCTCTAAGATAGAGCTTGT+GGG | + | chr4_4:58313599-58313618 | None:intergenic | 35.0% |
| AAGAAGAACTGAGAAGGAAA+GGG | + | chr4_4:58313809-58313828 | None:intergenic | 35.0% | |
| TACGACATTTGGAAAAAGGT+GGG | + | chr4_4:58313854-58313873 | None:intergenic | 35.0% | |
| ATACGACATTTGGAAAAAGG+TGG | + | chr4_4:58313855-58313874 | None:intergenic | 35.0% | |
| CTGATACGACATTTGGAAAA+AGG | + | chr4_4:58313858-58313877 | None:intergenic | 35.0% | |
| TTAGAATTGGTACTAGAGGA+AGG | - | chr4_4:58313928-58313947 | Msa0690500:three_prime_UTR | 35.0% | |
| ! | AGTTGTTTCACATGTTGACT+TGG | - | chr4_4:58314229-58314248 | Msa0690500:exon | 35.0% |
| ! | GATAGTGTGTTGTTGACATT+TGG | - | chr4_4:58314254-58314273 | Msa0690500:CDS | 35.0% |
| GTTTGATGTTTCGTCATTCA+AGG | - | chr4_4:58314326-58314345 | Msa0690500:CDS | 35.0% | |
| ! | TTGCGACAGTATTTTATCAC+CGG | + | chr4_4:58314781-58314800 | None:intergenic | 35.0% |
| ! | AGATGAAGCACTCATAAATG+GGG | - | chr4_4:58314845-58314864 | Msa0690500:intron | 35.0% |
| ! | CATGGCAAAATTGTTTTCTC+GGG | + | chr4_4:58314918-58314937 | None:intergenic | 35.0% |
| ! | GCATGGCAAAATTGTTTTCT+CGG | + | chr4_4:58314919-58314938 | None:intergenic | 35.0% |
| ! | TGATTTTCGTCTAAGTGATG+CGG | + | chr4_4:58315030-58315049 | None:intergenic | 35.0% |
| TCTTGTCACCATTAACAACA+TGG | - | chr4_4:58315246-58315265 | Msa0690500:intron | 35.0% | |
| ATGGTTGAGTGTAGAGTAAT+AGG | - | chr4_4:58315272-58315291 | Msa0690500:intron | 35.0% | |
| AAGGCTAACTCTTAAAACAC+AGG | + | chr4_4:58315341-58315360 | None:intergenic | 35.0% | |
| !! | TTAGCTTTATGGAAAACCGA+CGG | - | chr4_4:58315475-58315494 | Msa0690500:intron | 35.0% |
| AAGGCTTAGAAAACTAAGTG+AGG | - | chr4_4:58315571-58315590 | Msa0690500:intron | 35.0% | |
| AGGCTTAGAAAACTAAGTGA+GGG | - | chr4_4:58315572-58315591 | Msa0690500:intron | 35.0% | |
| ATTCTCAGATATTGGGGAAA+GGG | + | chr4_4:58315940-58315959 | None:intergenic | 35.0% | |
| AATTCTCAGATATTGGGGAA+AGG | + | chr4_4:58315941-58315960 | None:intergenic | 35.0% | |
| AGAAATCAGACGACCAAATA+TGG | + | chr4_4:58316053-58316072 | None:intergenic | 35.0% | |
| GATGGAAATTGCTTGTTTAG+AGG | - | chr4_4:58316203-58316222 | Msa0690500:intron | 35.0% | |
| TGATATGATGAAGATGGGTA+AGG | - | chr4_4:58316380-58316399 | Msa0690500:intron | 35.0% | |
| ATGGTAGGTTGTATTATCAG+AGG | - | chr4_4:58316499-58316518 | Msa0690500:intron | 35.0% | |
| TTTCAACTGAACTCCTTATC+AGG | - | chr4_4:58316557-58316576 | Msa0690500:intron | 35.0% | |
| !! | CTCTAAAACTTCACTATTGC+AGG | + | chr4_4:58316643-58316662 | None:intergenic | 35.0% |
| TTGAAATTTCCGTGTTAAGC+GGG | + | chr4_4:58316668-58316687 | None:intergenic | 35.0% | |
| GACAATATGTAGCATTCTGT+AGG | - | chr4_4:58316861-58316880 | Msa0690500:CDS | 35.0% | |
| GCAATGTAATTGGGTAAGGT+AGG | - | chr4_4:58313572-58313591 | Msa0690500:three_prime_UTR | 40.0% | |
| !! | GATCTCTAAGATAGAGCTTG+TGG | + | chr4_4:58313600-58313619 | None:intergenic | 40.0% |
| GAATGCAGAAGAGGAAGAAA+GGG | + | chr4_4:58313757-58313776 | None:intergenic | 40.0% | |
| AGAATGCAGAAGAGGAAGAA+AGG | + | chr4_4:58313758-58313777 | None:intergenic | 40.0% | |
| AGAAGAACTGAGAAGGAAAG+GGG | + | chr4_4:58313808-58313827 | None:intergenic | 40.0% | |
| CAAGAAGAACTGAGAAGGAA+AGG | + | chr4_4:58313810-58313829 | None:intergenic | 40.0% | |
| !! | ATGGGTTGGTGCTATATGTT+AGG | - | chr4_4:58314188-58314207 | Msa0690500:three_prime_UTR | 40.0% |
| !! | TGTTTCACATGTTGACTTGG+TGG | - | chr4_4:58314232-58314251 | Msa0690500:exon | 40.0% |
| ATACAGAGTTAGCCGAAGAA+GGG | - | chr4_4:58314727-58314746 | Msa0690500:intron | 40.0% | |
| AATCTGAATAGCCCCTTCTT+CGG | + | chr4_4:58314742-58314761 | None:intergenic | 40.0% | |
| ! | GTTTTCTCGGGCAAATAAGT+AGG | + | chr4_4:58314906-58314925 | None:intergenic | 40.0% |
| TTAGAGATGGATATCTGTGG+AGG | + | chr4_4:58315058-58315077 | None:intergenic | 40.0% | |
| CACTTAGAGATGGATATCTG+TGG | + | chr4_4:58315061-58315080 | None:intergenic | 40.0% | |
| TATCCTCGAGTATGATTCTC+AGG | + | chr4_4:58315308-58315327 | None:intergenic | 40.0% | |
| AGAATCATACTCGAGGATAC+TGG | - | chr4_4:58315309-58315328 | Msa0690500:intron | 40.0% | |
| GAATCATACTCGAGGATACT+GGG | - | chr4_4:58315310-58315329 | Msa0690500:intron | 40.0% | |
| GGCTTAGAAAACTAAGTGAG+GGG | - | chr4_4:58315573-58315592 | Msa0690500:intron | 40.0% | |
| GCTTAGAAAACTAAGTGAGG+GGG | - | chr4_4:58315574-58315593 | Msa0690500:intron | 40.0% | |
| GGTTGTCAAAGCTACCTTAT+TGG | - | chr4_4:58315595-58315614 | Msa0690500:intron | 40.0% | |
| TTCTCAGATATTGGGGAAAG+GGG | + | chr4_4:58315939-58315958 | None:intergenic | 40.0% | |
| AAGAACCATCCAAAGTCGTA+AGG | + | chr4_4:58316145-58316164 | None:intergenic | 40.0% | |
| TGCAAAGATGTTCATACCAC+GGG | + | chr4_4:58316252-58316271 | None:intergenic | 40.0% | |
| CTGCAAAGATGTTCATACCA+CGG | + | chr4_4:58316253-58316272 | None:intergenic | 40.0% | |
| ! | AGTTTCAAGCACTGCACAAA+CGG | + | chr4_4:58316334-58316353 | None:intergenic | 40.0% |
| GTGCTTGAAACTTCCAGAAT+CGG | - | chr4_4:58316342-58316361 | Msa0690500:intron | 40.0% | |
| ! | ATAAGCATAAGGACCGATTC+TGG | + | chr4_4:58316358-58316377 | None:intergenic | 40.0% |
| ! | TTTAGAGTTCCCGCTTAACA+CGG | - | chr4_4:58316656-58316675 | Msa0690500:intron | 40.0% |
| ! | TCTGTAGGCATGTTTTGTAG+AGG | - | chr4_4:58316876-58316895 | Msa0690500:CDS | 40.0% |
| CTTCCTTTCAACATCCTTCT+TGG | - | chr4_4:58316926-58316945 | Msa0690500:CDS | 40.0% | |
| ATACAACAGCCAAAATGCCA+AGG | + | chr4_4:58316955-58316974 | None:intergenic | 40.0% | |
| AGGAAGAGAGAATGCAGAAG+AGG | + | chr4_4:58313766-58313785 | None:intergenic | 45.0% | |
| ! | GAAGGATTGGAAGGTGTAGA+AGG | + | chr4_4:58313786-58313805 | None:intergenic | 45.0% |
| AGGGACAAGAAGAACTGAGA+AGG | + | chr4_4:58313815-58313834 | None:intergenic | 45.0% | |
| !! | GGGATTTTGAAAGACGCGAA+GGG | + | chr4_4:58313834-58313853 | None:intergenic | 45.0% |
| !! | TGGGATTTTGAAAGACGCGA+AGG | + | chr4_4:58313835-58313854 | None:intergenic | 45.0% |
| ! | GGAAGCTCTGATACGACATT+TGG | + | chr4_4:58313865-58313884 | None:intergenic | 45.0% |
| ! | TTAGAGCAGTCCACTAGCTT+TGG | - | chr4_4:58314665-58314684 | Msa0690500:intron | 45.0% |
| CATACAGAGTTAGCCGAAGA+AGG | - | chr4_4:58314726-58314745 | Msa0690500:intron | 45.0% | |
| TACAGAGTTAGCCGAAGAAG+GGG | - | chr4_4:58314728-58314747 | Msa0690500:intron | 45.0% | |
| !! | CTACCAGCTGGAAGTGTTAT+TGG | - | chr4_4:58315002-58315021 | Msa0690500:CDS | 45.0% |
| GTACCAATAACACTTCCAGC+TGG | + | chr4_4:58315008-58315027 | None:intergenic | 45.0% | |
| CACGAGCTTACACTTAGAGA+TGG | + | chr4_4:58315071-58315090 | None:intergenic | 45.0% | |
| ATGCCTGAGAATCATACTCG+AGG | - | chr4_4:58315302-58315321 | Msa0690500:intron | 45.0% | |
| CAGGTGCAAGATAATTTCCG+TGG | - | chr4_4:58315536-58315555 | Msa0690500:intron | 45.0% | |
| TCCGTGGAAATGTGCAAACA+AGG | - | chr4_4:58315552-58315571 | Msa0690500:intron | 45.0% | |
| !! | GCCTTGTTTGCACATTTCCA+CGG | + | chr4_4:58315556-58315575 | None:intergenic | 45.0% |
| GGCTATTCCAATTGCACCTT+GGG | + | chr4_4:58315702-58315721 | None:intergenic | 45.0% | |
| AGGCTATTCCAATTGCACCT+TGG | + | chr4_4:58315703-58315722 | None:intergenic | 45.0% | |
| GTGCAATTGGAATAGCCTGT+AGG | - | chr4_4:58315705-58315724 | Msa0690500:CDS | 45.0% | |
| TCTCAGATATTGGGGAAAGG+GGG | + | chr4_4:58315938-58315957 | None:intergenic | 45.0% | |
| TTTGGTCGTCTGATTTCTGC+AGG | - | chr4_4:58316055-58316074 | Msa0690500:intron | 45.0% | |
| AAGAGCCTTCCTTACGACTT+TGG | - | chr4_4:58316133-58316152 | Msa0690500:intron | 45.0% | |
| ACCATCCAAAGTCGTAAGGA+AGG | + | chr4_4:58316141-58316160 | None:intergenic | 45.0% | |
| TATGCTAGCAGAGACAAGGA+TGG | - | chr4_4:58316185-58316204 | Msa0690500:intron | 45.0% | |
| ! | CACTGCACAAACGGAGTTTT+GGG | + | chr4_4:58316325-58316344 | None:intergenic | 45.0% |
| GATGAAGATGGGTAAGGATG+CGG | - | chr4_4:58316386-58316405 | Msa0690500:intron | 45.0% | |
| ATGAAGATGGGTAAGGATGC+GGG | - | chr4_4:58316387-58316406 | Msa0690500:intron | 45.0% | |
| CAACACTCAATCGGTAACAC+AGG | - | chr4_4:58316475-58316494 | Msa0690500:intron | 45.0% | |
| CTCAATCGGTAACACAGGTA+TGG | - | chr4_4:58316480-58316499 | Msa0690500:intron | 45.0% | |
| ATCGGTAACACAGGTATGGT+AGG | - | chr4_4:58316484-58316503 | Msa0690500:intron | 45.0% | |
| CAATAGGTGATTCTGGACTC+TGG | - | chr4_4:58316685-58316704 | Msa0690500:intron | 45.0% | |
| CTGCCAAGAAGGATGTTGAA+AGG | + | chr4_4:58316932-58316951 | None:intergenic | 45.0% | |
| AGGAAAGGGGAAGGATTGGA+AGG | + | chr4_4:58313795-58313814 | None:intergenic | 50.0% | |
| GAGAAGGAAAGGGGAAGGAT+TGG | + | chr4_4:58313799-58313818 | None:intergenic | 50.0% | |
| GAACTGAGAAGGAAAGGGGA+AGG | + | chr4_4:58313804-58313823 | None:intergenic | 50.0% | |
| CGTCTGTTGCTCAACAGCAA+CGG | + | chr4_4:58313886-58313905 | None:intergenic | 50.0% | |
| AACCGCTTGCAGACATAGGT+GGG | - | chr4_4:58314799-58314818 | Msa0690500:intron | 50.0% | |
| TTCCCACCTATGTCTGCAAG+CGG | + | chr4_4:58314804-58314823 | None:intergenic | 50.0% | |
| CTTGCAGACATAGGTGGGAA+GGG | - | chr4_4:58314804-58314823 | Msa0690500:intron | 50.0% | |
| TCACTAGCTGATCTACCAGC+TGG | - | chr4_4:58314990-58315009 | Msa0690500:CDS | 50.0% | |
| !! | GCTACCTTATTGGCTCTAGC+TGG | - | chr4_4:58315605-58315624 | Msa0690500:intron | 50.0% |
| CAGTCCAGCTAGAGCCAATA+AGG | + | chr4_4:58315612-58315631 | None:intergenic | 50.0% | |
| CGTAAGGAAGGCTCTTTCAC+AGG | + | chr4_4:58316129-58316148 | None:intergenic | 50.0% | |
| GCCTTCCTTACGACTTTGGA+TGG | - | chr4_4:58316137-58316156 | Msa0690500:intron | 50.0% | |
| TTCTTGCCGAACGCCTATTG+CGG | - | chr4_4:58316160-58316179 | Msa0690500:intron | 50.0% | |
| TTCATACCACGGGTTCCATC+GGG | + | chr4_4:58316242-58316261 | None:intergenic | 50.0% | |
| GTTCATACCACGGGTTCCAT+CGG | + | chr4_4:58316243-58316262 | None:intergenic | 50.0% | |
| ! | GCACTGCACAAACGGAGTTT+TGG | + | chr4_4:58316326-58316345 | None:intergenic | 50.0% |
| AACATCCTTCTTGGCAGCCT+TGG | - | chr4_4:58316935-58316954 | Msa0690500:exon | 50.0% | |
| AAATGCCAAGGCTGCCAAGA+AGG | + | chr4_4:58316943-58316962 | None:intergenic | 50.0% | |
| ! | TCTTGGCAGCCTTGGCATTT+TGG | - | chr4_4:58316943-58316962 | Msa0690500:exon | 50.0% |
| !! | CAGTCCACTAGCTTTGGCTC+AGG | - | chr4_4:58314671-58314690 | Msa0690500:intron | 55.0% |
| TGTGCCTGAGCCAAAGCTAG+TGG | + | chr4_4:58314678-58314697 | None:intergenic | 55.0% | |
| TCGCAACCGCTTGCAGACAT+AGG | - | chr4_4:58314795-58314814 | Msa0690500:intron | 55.0% | |
| CAACCGCTTGCAGACATAGG+TGG | - | chr4_4:58314798-58314817 | Msa0690500:intron | 55.0% | |
| GCTTGCAGACATAGGTGGGA+AGG | - | chr4_4:58314803-58314822 | Msa0690500:intron | 55.0% | |
| TCCTCTCGTGGAAGGTTGCA+TGG | + | chr4_4:58314936-58314955 | None:intergenic | 55.0% | |
| CTCTGACATCCTCTCGTGGA+AGG | + | chr4_4:58314944-58314963 | None:intergenic | 55.0% | |
| GCATCTCTGACATCCTCTCG+TGG | + | chr4_4:58314948-58314967 | None:intergenic | 55.0% | |
| ATGCTTCCAGCTGTTGCCCA+AGG | - | chr4_4:58315683-58315702 | Msa0690500:CDS | 55.0% | |
| ATTGCACCTTGGGCAACAGC+TGG | + | chr4_4:58315692-58315711 | None:intergenic | 55.0% | |
| GCTGTTGCCCAAGGTGCAAT+TGG | - | chr4_4:58315692-58315711 | Msa0690500:CDS | 55.0% | |
| TCTTGCCGAACGCCTATTGC+GGG | - | chr4_4:58316161-58316180 | Msa0690500:intron | 55.0% | |
| CATACCCCGCAATAGGCGTT+CGG | + | chr4_4:58316169-58316188 | None:intergenic | 55.0% | |
| CTGCTAGCATACCCCGCAAT+AGG | + | chr4_4:58316176-58316195 | None:intergenic | 55.0% | |
| GGGGTATGCTAGCAGAGACA+AGG | - | chr4_4:58316181-58316200 | Msa0690500:intron | 55.0% | |
| !! | GGATTAGTTGCTTCCCCCGA+TGG | - | chr4_4:58316224-58316243 | Msa0690500:intron | 55.0% |
| TCATACCACGGGTTCCATCG+GGG | + | chr4_4:58316241-58316260 | None:intergenic | 55.0% | |
| GAGGAGCTTCTTTCTCGAGC+TGG | - | chr4_4:58316411-58316430 | Msa0690500:intron | 55.0% | |
| CTTCTTTCTCGAGCTGGACC+TGG | - | chr4_4:58316417-58316436 | Msa0690500:intron | 55.0% | |
| GCCATGCAACCTTCCACGAG+AGG | - | chr4_4:58314932-58314951 | Msa0690500:intron | 60.0% | |
| CTTGCCGAACGCCTATTGCG+GGG | - | chr4_4:58316162-58316181 | Msa0690500:intron | 60.0% | |
| CATACCACGGGTTCCATCGG+GGG | + | chr4_4:58316240-58316259 | None:intergenic | 60.0% | |
| GATGGGTAAGGATGCGGGTG+AGG | - | chr4_4:58316392-58316411 | Msa0690500:intron | 60.0% | |
| GGGGAAAGGGGGCCATTGCA+TGG | + | chr4_4:58315927-58315946 | None:intergenic | 65.0% | |
| GCTTCCCCCGATGGAACCCG+TGG | - | chr4_4:58316233-58316252 | Msa0690500:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 58313562 | 58317133 | 58313562 | ID=Msa0690500;Name=Msa0690500 |
| chr4_4 | mRNA | 58313562 | 58317133 | 58313562 | ID=Msa0690500-mRNA-1;Parent=Msa0690500;Name=Msa0690500-mRNA-1;_AED=0.35;_eAED=0.35;_QI=182|1|1|1|0.8|0.66|6|647|369 |
| chr4_4 | exon | 58313562 | 58313841 | 58313562 | ID=Msa0690500-mRNA-1:exon:15669;Parent=Msa0690500-mRNA-1 |
| chr4_4 | exon | 58313873 | 58314352 | 58313873 | ID=Msa0690500-mRNA-1:exon:15668;Parent=Msa0690500-mRNA-1 |
| chr4_4 | exon | 58314441 | 58314618 | 58314441 | ID=Msa0690500-mRNA-1:exon:15667;Parent=Msa0690500-mRNA-1 |
| chr4_4 | exon | 58314950 | 58315156 | 58314950 | ID=Msa0690500-mRNA-1:exon:15666;Parent=Msa0690500-mRNA-1 |
| chr4_4 | exon | 58315616 | 58316021 | 58315616 | ID=Msa0690500-mRNA-1:exon:15665;Parent=Msa0690500-mRNA-1 |
| chr4_4 | exon | 58316746 | 58317133 | 58316746 | ID=Msa0690500-mRNA-1:exon:15664;Parent=Msa0690500-mRNA-1 |
| chr4_4 | five_prime_UTR | 58316952 | 58317133 | 58316952 | ID=Msa0690500-mRNA-1:five_prime_utr;Parent=Msa0690500-mRNA-1 |
| chr4_4 | CDS | 58316746 | 58316951 | 58316746 | ID=Msa0690500-mRNA-1:cds;Parent=Msa0690500-mRNA-1 |
| chr4_4 | CDS | 58315616 | 58316021 | 58315616 | ID=Msa0690500-mRNA-1:cds;Parent=Msa0690500-mRNA-1 |
| chr4_4 | CDS | 58314950 | 58315156 | 58314950 | ID=Msa0690500-mRNA-1:cds;Parent=Msa0690500-mRNA-1 |
| chr4_4 | CDS | 58314441 | 58314618 | 58314441 | ID=Msa0690500-mRNA-1:cds;Parent=Msa0690500-mRNA-1 |
| chr4_4 | CDS | 58314240 | 58314352 | 58314240 | ID=Msa0690500-mRNA-1:cds;Parent=Msa0690500-mRNA-1 |
| chr4_4 | three_prime_UTR | 58313873 | 58314239 | 58313873 | ID=Msa0690500-mRNA-1:three_prime_utr;Parent=Msa0690500-mRNA-1 |
| chr4_4 | three_prime_UTR | 58313562 | 58313841 | 58313562 | ID=Msa0690500-mRNA-1:three_prime_utr;Parent=Msa0690500-mRNA-1 |
| Gene Sequence |
| Protein sequence |
