Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375620 | XP_013461369.1 | 95.398 | 565 | 26 | 0 | 1 | 565 | 6 | 570 | 0.0 | 1095 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375620 | sp|Q9SDQ3|SCL1_ARATH | 59.933 | 599 | 185 | 14 | 1 | 565 | 16 | 593 | 0.0 | 654 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375620 | A0A072V083 | 95.398 | 565 | 26 | 0 | 1 | 565 | 6 | 570 | 0.0 | 1095 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0375620 | TF | GRAS |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0025570 | Msa0375620 | 0.806146 | 9.477090e-50 | -8.615850e-47 |
| Msa0031650 | Msa0375620 | 0.803123 | 4.051232e-49 | -8.615850e-47 |
| Msa0042210 | Msa0375620 | -0.804659 | 1.942413e-49 | -8.615850e-47 |
| Msa0047660 | Msa0375620 | -0.805168 | 1.520514e-49 | -8.615850e-47 |
| Msa0060410 | Msa0375620 | 0.812615 | 3.878668e-51 | -8.615850e-47 |
| Msa0070120 | Msa0375620 | 0.813470 | 2.518780e-51 | -8.615850e-47 |
| Msa0073110 | Msa0375620 | 0.802105 | 6.570034e-49 | -8.615850e-47 |
| Msa0075080 | Msa0375620 | -0.803093 | 4.109946e-49 | -8.615850e-47 |
| Msa0098380 | Msa0375620 | 0.807778 | 4.280625e-50 | -8.615850e-47 |
| Msa0117650 | Msa0375620 | 0.844970 | 5.433670e-59 | -8.615850e-47 |
| Msa0136000 | Msa0375620 | 0.802143 | 6.451736e-49 | -8.615850e-47 |
| Msa0162170 | Msa0375620 | -0.829283 | 5.613855e-55 | -8.615850e-47 |
| Msa0167570 | Msa0375620 | -0.800711 | 1.267572e-48 | -8.615850e-47 |
| Msa0168470 | Msa0375620 | -0.805252 | 1.459899e-49 | -8.615850e-47 |
| Msa0171740 | Msa0375620 | 0.814555 | 1.451460e-51 | -8.615850e-47 |
| Msa0185040 | Msa0375620 | 0.837435 | 5.206399e-57 | -8.615850e-47 |
| Msa0193950 | Msa0375620 | 0.805919 | 1.058088e-49 | -8.615850e-47 |
| Msa0368190 | Msa0375620 | -0.813520 | 2.455239e-51 | -8.615850e-47 |
| Msa0375620 | Msa0449380 | 0.810670 | 1.027139e-50 | -8.615850e-47 |
| Msa0375620 | Msa0454770 | 0.814438 | 1.540575e-51 | -8.615850e-47 |
| Msa0375620 | Msa0461150 | -0.810242 | 1.270279e-50 | -8.615850e-47 |
| Msa0375620 | Msa0470330 | -0.819154 | 1.347717e-52 | -8.615850e-47 |
| Msa0375620 | Msa0524710 | 0.817206 | 3.719361e-52 | -8.615850e-47 |
| Msa0375620 | Msa0540640 | 0.806155 | 9.434164e-50 | -8.615850e-47 |
| Msa0375620 | Msa0547370 | 0.820230 | 7.656183e-53 | -8.615850e-47 |
| Msa0375620 | Msa0588040 | 0.810700 | 1.011763e-50 | -8.615850e-47 |
| Msa0375620 | Msa0597800 | 0.849622 | 2.873310e-60 | -8.615850e-47 |
| Msa0375620 | Msa0597820 | 0.831736 | 1.409994e-55 | -8.615850e-47 |
| Msa0375620 | Msa0619030 | -0.806490 | 8.018783e-50 | -8.615850e-47 |
| Msa0375620 | Msa0622890 | 0.804895 | 1.734050e-49 | -8.615850e-47 |
| Msa0375620 | Msa0628200 | 0.816530 | 5.274800e-52 | -8.615850e-47 |
| Msa0375620 | Msa0630910 | -0.812338 | 4.457831e-51 | -8.615850e-47 |
| Msa0375620 | Msa0637590 | 0.855593 | 5.683457e-62 | -8.615850e-47 |
| Msa0375620 | Msa0637700 | 0.823040 | 1.715722e-53 | -8.615850e-47 |
| Msa0375620 | Msa0643230 | 0.803901 | 2.794120e-49 | -8.615850e-47 |
| Msa0375620 | Msa0644340 | 0.804278 | 2.332917e-49 | -8.615850e-47 |
| Msa0375620 | Msa0673620 | -0.800967 | 1.124348e-48 | -8.615850e-47 |
| Msa0375620 | Msa0682910 | 0.819188 | 1.324420e-52 | -8.615850e-47 |
| Msa0375620 | Msa0718770 | 0.800396 | 1.470076e-48 | -8.615850e-47 |
| Msa0375620 | Msa0719600 | 0.802564 | 5.283837e-49 | -8.615850e-47 |
| Msa0375620 | Msa0747710 | 0.801368 | 9.307935e-49 | -8.615850e-47 |
| Msa0375620 | Msa0784780 | -0.809388 | 1.939748e-50 | -8.615850e-47 |
| Msa0375620 | Msa0800120 | 0.808165 | 3.542069e-50 | -8.615850e-47 |
| Msa0375620 | Msa0800150 | 0.820196 | 7.794546e-53 | -8.615850e-47 |
| Msa0375620 | Msa0906660 | 0.801641 | 8.179437e-49 | -8.615850e-47 |
| Msa0375620 | Msa0913500 | 0.803907 | 2.786394e-49 | -8.615850e-47 |
| Msa0375620 | Msa0925940 | 0.819961 | 8.820557e-53 | -8.615850e-47 |
| Msa0375620 | Msa0966590 | 0.812369 | 4.388569e-51 | -8.615850e-47 |
| Msa0375620 | Msa1007900 | 0.805751 | 1.147466e-49 | -8.615850e-47 |
| Msa0375620 | Msa1019420 | 0.822302 | 2.547612e-53 | -8.615850e-47 |
| Msa0375620 | Msa1029860 | 0.803172 | 3.957385e-49 | -8.615850e-47 |
| Msa0375620 | Msa1035050 | 0.817878 | 2.624294e-52 | -8.615850e-47 |
| Msa0375620 | Msa1062290 | 0.800118 | 1.674493e-48 | -8.615850e-47 |
| Msa0375620 | Msa1075090 | 0.806194 | 9.259288e-50 | -8.615850e-47 |
| Msa0375620 | Msa1085820 | 0.805314 | 1.417253e-49 | -8.615850e-47 |
| Msa0375620 | Msa1103450 | 0.808450 | 3.079235e-50 | -8.615850e-47 |
| Msa0375620 | Msa1107220 | 0.819664 | 1.031211e-52 | -8.615850e-47 |
| Msa0375620 | Msa1107520 | 0.804452 | 2.145740e-49 | -8.615850e-47 |
| Msa0375620 | Msa1131300 | -0.822856 | 1.893724e-53 | -8.615850e-47 |
| Msa0375620 | Msa1136760 | 0.815388 | 9.483885e-52 | -8.615850e-47 |
| Msa0375620 | Msa1154060 | 0.835674 | 1.462121e-56 | -8.615850e-47 |
| Msa0375620 | Msa1191270 | 0.818218 | 2.198419e-52 | -8.615850e-47 |
| Msa0375620 | Msa1215540 | -0.828115 | 1.075350e-54 | -8.615850e-47 |
| Msa0375620 | Msa1223620 | 0.801004 | 1.104453e-48 | -8.615850e-47 |
| Msa0375620 | Msa1254870 | 0.803256 | 3.801254e-49 | -8.615850e-47 |
| Msa0375620 | Msa1268360 | 0.815656 | 8.265766e-52 | -8.615850e-47 |
| Msa0375620 | Msa1268390 | 0.800215 | 1.599800e-48 | -8.615850e-47 |
| Msa0375620 | Msa1269200 | 0.817762 | 2.786764e-52 | -8.615850e-47 |
| Msa0375620 | Msa1273320 | 0.804595 | 2.003259e-49 | -8.615850e-47 |
| Msa0375620 | Msa1301280 | -0.836416 | 9.476331e-57 | -8.615850e-47 |
| Msa0375620 | Msa1328430 | 0.804772 | 1.840017e-49 | -8.615850e-47 |
| Msa0375620 | Msa1364690 | 0.816103 | 6.571002e-52 | -8.615850e-47 |
| Msa0375620 | Msa1404810 | -0.829375 | 5.332616e-55 | -8.615850e-47 |
| Msa0375620 | Msa1437590 | 0.818660 | 1.745227e-52 | -8.615850e-47 |
| Msa0375620 | Msa1455200 | 0.823219 | 1.558234e-53 | -8.615850e-47 |
| Msa0245660 | Msa0375620 | 0.830927 | 2.228886e-55 | -8.615850e-47 |
| Msa0278960 | Msa0375620 | 0.801985 | 6.953815e-49 | -8.615850e-47 |
| Msa0282830 | Msa0375620 | 0.816544 | 5.236394e-52 | -8.615850e-47 |
| Msa0286360 | Msa0375620 | 0.805530 | 1.277048e-49 | -8.615850e-47 |
| Msa0314240 | Msa0375620 | 0.807421 | 5.096162e-50 | -8.615850e-47 |
| Msa0321240 | Msa0375620 | 0.817981 | 2.487738e-52 | -8.615850e-47 |
| Msa0336640 | Msa0375620 | 0.809066 | 2.273760e-50 | -8.615850e-47 |
| Msa0356240 | Msa0375620 | 0.809184 | 2.144912e-50 | -8.615850e-47 |
| Msa0356270 | Msa0375620 | 0.803659 | 3.137460e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375620 | MtrunA17_Chr3g0125811 | 95.398 | 565 | 26 | 0 | 1 | 565 | 6 | 570 | 0.0 | 1095 |
| Msa0375620 | MtrunA17_Chr1g0159461 | 70.284 | 599 | 137 | 7 | 1 | 565 | 1 | 592 | 0.0 | 804 |
| Msa0375620 | MtrunA17_Chr5g0447691 | 50.721 | 416 | 199 | 1 | 156 | 565 | 129 | 544 | 1.51e-152 | 448 |
| Msa0375620 | MtrunA17_Chr2g0319091 | 54.054 | 370 | 170 | 0 | 196 | 565 | 210 | 579 | 9.69e-145 | 429 |
| Msa0375620 | MtrunA17_Chr3g0101141 | 49.344 | 381 | 192 | 1 | 186 | 565 | 162 | 542 | 5.13e-139 | 414 |
| Msa0375620 | MtrunA17_Chr5g0445331 | 50.777 | 386 | 185 | 3 | 185 | 565 | 147 | 532 | 2.57e-137 | 409 |
| Msa0375620 | MtrunA17_Chr4g0076091 | 47.297 | 370 | 194 | 1 | 196 | 564 | 173 | 542 | 6.73e-126 | 380 |
| Msa0375620 | MtrunA17_Chr2g0290241 | 46.631 | 371 | 197 | 1 | 196 | 565 | 55 | 425 | 2.33e-123 | 369 |
| Msa0375620 | MtrunA17_Chr7g0236851 | 38.546 | 454 | 256 | 10 | 119 | 564 | 218 | 656 | 1.20e-86 | 281 |
| Msa0375620 | MtrunA17_Chr6g0468561 | 40.153 | 391 | 192 | 10 | 196 | 565 | 293 | 662 | 3.20e-80 | 265 |
| Msa0375620 | MtrunA17_Chr7g0224271 | 37.726 | 387 | 211 | 5 | 197 | 565 | 299 | 673 | 1.81e-76 | 255 |
| Msa0375620 | MtrunA17_Chr3g0110971 | 34.465 | 383 | 220 | 8 | 199 | 565 | 220 | 587 | 1.25e-65 | 224 |
| Msa0375620 | MtrunA17_Chr8g0357601 | 34.646 | 381 | 224 | 7 | 199 | 565 | 183 | 552 | 2.40e-64 | 220 |
| Msa0375620 | MtrunA17_Chr8g0376381 | 35.121 | 373 | 216 | 10 | 199 | 565 | 170 | 522 | 2.81e-64 | 219 |
| Msa0375620 | MtrunA17_Chr2g0306641 | 33.617 | 470 | 273 | 18 | 115 | 565 | 38 | 487 | 3.04e-63 | 216 |
| Msa0375620 | MtrunA17_Chr4g0031721 | 31.622 | 370 | 252 | 1 | 196 | 564 | 314 | 683 | 9.08e-63 | 218 |
| Msa0375620 | MtrunA17_Chr7g0245601 | 36.066 | 366 | 219 | 6 | 201 | 565 | 441 | 792 | 6.95e-62 | 218 |
| Msa0375620 | MtrunA17_Chr4g0057891 | 32.461 | 382 | 236 | 5 | 197 | 565 | 148 | 520 | 1.88e-60 | 208 |
| Msa0375620 | MtrunA17_Chr7g0238891 | 30.479 | 397 | 269 | 2 | 176 | 565 | 344 | 740 | 1.90e-59 | 210 |
| Msa0375620 | MtrunA17_Chr4g0031741 | 31.436 | 369 | 248 | 4 | 198 | 564 | 284 | 649 | 1.49e-57 | 203 |
| Msa0375620 | MtrunA17_Chr2g0328381 | 31.016 | 374 | 247 | 6 | 196 | 564 | 273 | 640 | 2.80e-56 | 200 |
| Msa0375620 | MtrunA17_Chr2g0328341 | 30.376 | 372 | 252 | 3 | 196 | 564 | 270 | 637 | 3.96e-56 | 199 |
| Msa0375620 | MtrunA17_Chr4g0038851 | 28.571 | 455 | 254 | 8 | 171 | 565 | 26 | 469 | 8.31e-56 | 195 |
| Msa0375620 | MtrunA17_Chr4g0057291 | 35.864 | 382 | 218 | 14 | 198 | 564 | 292 | 661 | 5.50e-55 | 197 |
| Msa0375620 | MtrunA17_Chr4g0038761 | 35.040 | 371 | 220 | 10 | 201 | 565 | 87 | 442 | 7.52e-55 | 192 |
| Msa0375620 | MtrunA17_Chr4g0031711 | 28.877 | 374 | 261 | 3 | 196 | 564 | 359 | 732 | 9.36e-55 | 197 |
| Msa0375620 | MtrunA17_Chr4g0031701 | 27.828 | 442 | 304 | 5 | 130 | 562 | 188 | 623 | 2.92e-54 | 194 |
| Msa0375620 | MtrunA17_Chr2g0328391 | 30.319 | 376 | 251 | 7 | 196 | 564 | 297 | 668 | 6.31e-54 | 194 |
| Msa0375620 | MtrunA17_Chr4g0031731 | 27.991 | 443 | 304 | 5 | 130 | 563 | 188 | 624 | 6.66e-54 | 193 |
| Msa0375620 | MtrunA17_Chr5g0396491 | 28.372 | 430 | 241 | 7 | 197 | 565 | 55 | 478 | 9.62e-54 | 189 |
| Msa0375620 | MtrunA17_Chr3g0085681 | 27.553 | 421 | 249 | 4 | 195 | 565 | 22 | 436 | 2.07e-51 | 182 |
| Msa0375620 | MtrunA17_Chr4g0039661 | 31.915 | 376 | 233 | 8 | 199 | 565 | 194 | 555 | 1.41e-50 | 182 |
| Msa0375620 | MtrunA17_Chr2g0328411 | 28.125 | 384 | 270 | 4 | 182 | 564 | 275 | 653 | 4.70e-50 | 183 |
| Msa0375620 | MtrunA17_Chr5g0401131 | 31.392 | 395 | 250 | 10 | 185 | 565 | 103 | 490 | 6.83e-50 | 179 |
| Msa0375620 | MtrunA17_Chr2g0328431 | 26.306 | 517 | 348 | 12 | 67 | 564 | 151 | 653 | 6.82e-49 | 179 |
| Msa0375620 | MtrunA17_Chr3g0114841 | 31.618 | 408 | 238 | 12 | 185 | 564 | 105 | 499 | 1.34e-47 | 173 |
| Msa0375620 | MtrunA17_Chr2g0328401 | 29.706 | 340 | 230 | 5 | 198 | 534 | 290 | 623 | 2.24e-46 | 172 |
| Msa0375620 | MtrunA17_Chr1g0200401 | 29.219 | 397 | 237 | 12 | 197 | 565 | 79 | 459 | 6.40e-46 | 167 |
| Msa0375620 | MtrunA17_Chr2g0328361 | 30.027 | 373 | 227 | 8 | 196 | 564 | 272 | 614 | 2.75e-45 | 169 |
| Msa0375620 | MtrunA17_Chr1g0183641 | 32.626 | 377 | 221 | 13 | 198 | 564 | 123 | 476 | 1.26e-44 | 164 |
| Msa0375620 | MtrunA17_Chr5g0401421 | 27.488 | 422 | 244 | 8 | 196 | 564 | 33 | 445 | 3.24e-42 | 157 |
| Msa0375620 | MtrunA17_Chr2g0329591 | 28.792 | 389 | 247 | 8 | 197 | 565 | 73 | 451 | 5.63e-41 | 154 |
| Msa0375620 | MtrunA17_Chr4g0053901 | 26.606 | 436 | 274 | 7 | 174 | 564 | 33 | 467 | 1.07e-38 | 148 |
| Msa0375620 | MtrunA17_Chr5g0424131 | 30.287 | 383 | 248 | 10 | 197 | 564 | 120 | 498 | 2.42e-38 | 147 |
| Msa0375620 | MtrunA17_Chr2g0328371 | 31.474 | 251 | 167 | 2 | 269 | 518 | 2 | 248 | 1.34e-37 | 139 |
| Msa0375620 | MtrunA17_Chr3g0085361 | 26.648 | 349 | 200 | 4 | 266 | 565 | 9 | 350 | 2.95e-37 | 141 |
| Msa0375620 | MtrunA17_Chr2g0294461 | 25.854 | 410 | 264 | 10 | 178 | 565 | 194 | 585 | 3.06e-30 | 125 |
| Msa0375620 | MtrunA17_Chr7g0230731 | 27.688 | 372 | 248 | 8 | 199 | 565 | 373 | 728 | 7.01e-29 | 121 |
| Msa0375620 | MtrunA17_Chr7g0230771 | 27.957 | 372 | 247 | 8 | 199 | 565 | 376 | 731 | 1.80e-28 | 120 |
| Msa0375620 | MtrunA17_Chr7g0270031 | 26.385 | 379 | 257 | 10 | 197 | 565 | 188 | 554 | 1.47e-26 | 114 |
| Msa0375620 | MtrunA17_Chr2g0294471 | 25.195 | 385 | 257 | 10 | 199 | 565 | 205 | 576 | 2.20e-26 | 113 |
| Msa0375620 | MtrunA17_Chr8g0383981 | 27.177 | 379 | 242 | 12 | 198 | 564 | 139 | 495 | 7.21e-25 | 108 |
| Msa0375620 | MtrunA17_Chr4g0012071 | 25.995 | 377 | 247 | 11 | 199 | 565 | 197 | 551 | 7.31e-24 | 105 |
| Msa0375620 | MtrunA17_Chr2g0323111 | 29.310 | 174 | 121 | 2 | 392 | 564 | 133 | 305 | 1.06e-20 | 93.2 |
| Msa0375620 | MtrunA17_Chr1g0194621 | 27.875 | 287 | 185 | 9 | 287 | 565 | 246 | 518 | 7.84e-20 | 92.8 |
| Msa0375620 | MtrunA17_Chr8g0344101 | 23.077 | 403 | 266 | 15 | 190 | 565 | 215 | 600 | 1.14e-19 | 92.8 |
| Msa0375620 | MtrunA17_Chr8g0373561 | 21.958 | 378 | 218 | 13 | 222 | 565 | 207 | 541 | 1.58e-12 | 70.1 |
| Msa0375620 | MtrunA17_Chr4g0037781 | 31.977 | 172 | 90 | 6 | 171 | 337 | 39 | 188 | 7.37e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375620 | AT1G21450.1 | 59.933 | 599 | 185 | 14 | 1 | 565 | 16 | 593 | 0.0 | 654 |
| Msa0375620 | AT5G48150.1 | 52.658 | 395 | 184 | 2 | 172 | 565 | 98 | 490 | 6.98e-146 | 430 |
| Msa0375620 | AT5G48150.4 | 52.658 | 395 | 184 | 2 | 172 | 565 | 98 | 490 | 6.98e-146 | 430 |
| Msa0375620 | AT5G48150.2 | 52.658 | 395 | 184 | 2 | 172 | 565 | 98 | 490 | 6.98e-146 | 430 |
| Msa0375620 | AT5G48150.3 | 52.658 | 395 | 184 | 2 | 172 | 565 | 98 | 490 | 6.98e-146 | 430 |
| Msa0375620 | AT1G50600.3 | 51.688 | 385 | 185 | 1 | 182 | 565 | 142 | 526 | 1.55e-141 | 420 |
| Msa0375620 | AT1G50600.2 | 51.688 | 385 | 185 | 1 | 182 | 565 | 217 | 601 | 1.81e-140 | 420 |
| Msa0375620 | AT1G50600.1 | 51.688 | 385 | 185 | 1 | 182 | 565 | 213 | 597 | 2.07e-140 | 419 |
| Msa0375620 | AT2G04890.1 | 51.622 | 370 | 172 | 1 | 196 | 565 | 51 | 413 | 1.11e-134 | 398 |
| Msa0375620 | AT4G17230.1 | 46.757 | 370 | 197 | 0 | 196 | 565 | 156 | 525 | 9.43e-124 | 374 |
| Msa0375620 | AT4G17230.2 | 46.757 | 370 | 197 | 0 | 196 | 565 | 156 | 525 | 9.43e-124 | 374 |
| Msa0375620 | AT5G52510.1 | 39.221 | 385 | 209 | 5 | 196 | 565 | 266 | 640 | 7.88e-85 | 276 |
| Msa0375620 | AT1G66350.1 | 36.559 | 372 | 210 | 9 | 199 | 565 | 156 | 506 | 2.39e-68 | 229 |
| Msa0375620 | AT5G17490.1 | 35.242 | 454 | 246 | 13 | 136 | 565 | 87 | 516 | 1.04e-67 | 228 |
| Msa0375620 | AT3G03450.1 | 36.074 | 377 | 216 | 9 | 199 | 565 | 184 | 545 | 3.48e-67 | 228 |
| Msa0375620 | AT3G54220.1 | 36.585 | 369 | 214 | 8 | 201 | 564 | 296 | 649 | 8.03e-66 | 226 |
| Msa0375620 | AT1G07530.1 | 33.504 | 391 | 255 | 3 | 176 | 564 | 377 | 764 | 5.52e-64 | 224 |
| Msa0375620 | AT5G66770.1 | 36.074 | 377 | 218 | 9 | 199 | 565 | 221 | 584 | 2.76e-60 | 210 |
| Msa0375620 | AT1G14920.1 | 33.780 | 373 | 225 | 10 | 199 | 565 | 173 | 529 | 6.45e-60 | 207 |
| Msa0375620 | AT2G01570.1 | 34.301 | 379 | 215 | 12 | 199 | 565 | 225 | 581 | 9.89e-59 | 206 |
| Msa0375620 | AT2G29060.2 | 31.726 | 394 | 253 | 5 | 179 | 564 | 269 | 654 | 4.84e-57 | 202 |
| Msa0375620 | AT2G29060.1 | 31.726 | 394 | 253 | 5 | 179 | 564 | 306 | 691 | 9.83e-57 | 202 |
| Msa0375620 | AT2G37650.1 | 29.650 | 371 | 258 | 2 | 196 | 565 | 345 | 713 | 3.90e-56 | 201 |
| Msa0375620 | AT2G37650.2 | 29.650 | 371 | 258 | 2 | 196 | 565 | 333 | 701 | 3.96e-56 | 201 |
| Msa0375620 | AT5G59450.1 | 29.529 | 403 | 272 | 5 | 172 | 565 | 199 | 598 | 1.01e-55 | 198 |
| Msa0375620 | AT2G29065.1 | 30.423 | 378 | 254 | 5 | 196 | 564 | 250 | 627 | 1.29e-53 | 192 |
| Msa0375620 | AT3G46600.2 | 29.650 | 371 | 259 | 2 | 196 | 565 | 2 | 371 | 1.94e-53 | 186 |
| Msa0375620 | AT3G46600.1 | 29.650 | 371 | 259 | 2 | 196 | 565 | 210 | 579 | 3.10e-52 | 188 |
| Msa0375620 | AT3G46600.3 | 29.650 | 371 | 259 | 2 | 196 | 565 | 178 | 547 | 3.40e-52 | 187 |
| Msa0375620 | AT5G41920.1 | 32.454 | 379 | 224 | 10 | 198 | 565 | 43 | 400 | 2.92e-51 | 181 |
| Msa0375620 | AT3G50650.1 | 33.705 | 359 | 210 | 7 | 221 | 565 | 198 | 542 | 4.60e-50 | 181 |
| Msa0375620 | AT1G07520.2 | 27.820 | 399 | 272 | 5 | 182 | 564 | 130 | 528 | 1.06e-49 | 180 |
| Msa0375620 | AT1G07520.4 | 27.820 | 399 | 272 | 5 | 182 | 564 | 130 | 528 | 1.06e-49 | 180 |
| Msa0375620 | AT1G07520.3 | 27.820 | 399 | 272 | 5 | 182 | 564 | 295 | 693 | 1.58e-49 | 182 |
| Msa0375620 | AT1G07520.1 | 27.820 | 399 | 272 | 5 | 182 | 564 | 294 | 692 | 1.71e-49 | 182 |
| Msa0375620 | AT4G37650.1 | 28.972 | 428 | 260 | 11 | 165 | 565 | 119 | 529 | 3.23e-48 | 176 |
| Msa0375620 | AT1G63100.1 | 31.620 | 389 | 232 | 8 | 198 | 564 | 252 | 628 | 4.70e-44 | 166 |
| Msa0375620 | AT1G63100.2 | 34.650 | 329 | 195 | 7 | 198 | 518 | 277 | 593 | 8.91e-44 | 166 |
| Msa0375620 | AT4G08250.1 | 29.532 | 342 | 221 | 7 | 233 | 564 | 145 | 476 | 1.05e-41 | 157 |
| Msa0375620 | AT1G55580.1 | 26.877 | 413 | 250 | 9 | 196 | 565 | 42 | 445 | 4.45e-40 | 151 |
| Msa0375620 | AT3G49950.1 | 27.202 | 386 | 258 | 9 | 196 | 564 | 28 | 407 | 6.11e-38 | 145 |
| Msa0375620 | AT1G50420.1 | 32.381 | 210 | 133 | 2 | 197 | 403 | 56 | 259 | 2.47e-30 | 124 |
| Msa0375620 | AT1G50420.1 | 37.748 | 151 | 91 | 2 | 417 | 565 | 330 | 479 | 9.44e-28 | 117 |
| Msa0375620 | AT3G13840.1 | 25.750 | 400 | 268 | 11 | 178 | 565 | 128 | 510 | 1.05e-21 | 99.0 |
| Msa0375620 | AT3G60630.1 | 25.215 | 349 | 230 | 10 | 231 | 565 | 291 | 622 | 7.02e-21 | 97.1 |
| Msa0375620 | AT2G45160.1 | 25.890 | 309 | 203 | 8 | 268 | 565 | 346 | 639 | 1.07e-20 | 96.7 |
| Msa0375620 | AT4G00150.1 | 23.782 | 349 | 235 | 10 | 222 | 565 | 232 | 554 | 1.60e-18 | 89.4 |
| Msa0375620 | AT5G67411.1 | 32.663 | 199 | 121 | 6 | 315 | 502 | 2 | 198 | 5.38e-17 | 80.1 |
| Msa0375620 | AT4G36710.1 | 23.446 | 354 | 243 | 10 | 222 | 565 | 150 | 485 | 6.40e-16 | 80.9 |
Find 114 sgRNAs with CRISPR-Local
Find 258 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTATCAGAATAAGAAATT+TGG | 0.160232 | 3_1:+75402057 | None:intergenic |
| GATACAACCATGTCATTAAT+TGG | 0.223910 | 3_1:-75402164 | None:intergenic |
| CCATGTAGGCTGCAATTCTT+TGG | 0.255636 | 3_1:+75401460 | None:intergenic |
| GAAAAGGGTGCACTTCATTT+TGG | 0.257256 | 3_1:-75400523 | Msa0375620:CDS |
| ATTGAGGAGGAAGAGGAATA+TGG | 0.277716 | 3_1:-75401771 | Msa0375620:CDS |
| CATCGAATCTGATCCGAAAT+TGG | 0.287276 | 3_1:+75401887 | None:intergenic |
| GGTATGAAGTCGCGGGAAAA+TGG | 0.287860 | 3_1:-75400657 | Msa0375620:CDS |
| GCTACTGATGCTGCTAATAT+TGG | 0.307471 | 3_1:+75401629 | None:intergenic |
| TTTATCAGAATAAGAAATTT+GGG | 0.308040 | 3_1:+75402058 | None:intergenic |
| TTGATCCTAACATTATTGAT+TGG | 0.340862 | 3_1:-75401728 | Msa0375620:CDS |
| GAAATTTGGGAGGACAAATC+AGG | 0.343331 | 3_1:+75402071 | None:intergenic |
| GGTGCTGATCAGTCCAATTT+CGG | 0.378562 | 3_1:-75401900 | Msa0375620:CDS |
| TCACTCACATTTGTGCTCAT+TGG | 0.383131 | 3_1:+75400598 | None:intergenic |
| GTACAAGATAAAGGAGGAAA+AGG | 0.383813 | 3_1:-75400539 | Msa0375620:CDS |
| GGCAAGAGATATTGTTAATA+CGG | 0.384298 | 3_1:-75400710 | Msa0375620:CDS |
| GCCGCTCGCCTCGCTGAATC+CGG | 0.387906 | 3_1:-75401426 | Msa0375620:CDS |
| TCCACGACCGTTACAAGCTT+TGG | 0.389612 | 3_1:+75400874 | None:intergenic |
| TGATCCTAACATTATTGATT+GGG | 0.392056 | 3_1:-75401727 | Msa0375620:CDS |
| TCGCCTTGTCGGCACGAAAC+TGG | 0.400630 | 3_1:+75401926 | None:intergenic |
| CGACGAATTGTCTCAATTCA+AGG | 0.402603 | 3_1:-75401492 | Msa0375620:CDS |
| CATTCATAAAGAAGTTGCTT+GGG | 0.414263 | 3_1:+75401573 | None:intergenic |
| AACAGCAGCATATTCTGAAT+TGG | 0.421315 | 3_1:+75401693 | None:intergenic |
| CTGTGATAGGTACAAGATAA+AGG | 0.425096 | 3_1:-75400548 | Msa0375620:CDS |
| TTGAGGAGGAAGAGGAATAT+GGG | 0.430418 | 3_1:-75401770 | Msa0375620:CDS |
| CGAAGCAAGTGTTTGAATCA+TGG | 0.433718 | 3_1:+75401203 | None:intergenic |
| GTGGATTCAATTGAAGTTGA+TGG | 0.434066 | 3_1:-75401849 | Msa0375620:CDS |
| TCAGCCCAATCAATAATGTT+AGG | 0.434921 | 3_1:+75401723 | None:intergenic |
| ACCGTTGAAACGCTCTCGTC+AGG | 0.440496 | 3_1:+75400940 | None:intergenic |
| CCATCACATGTTAGATTGAC+CGG | 0.440788 | 3_1:-75401168 | Msa0375620:CDS |
| TCAGCACCACGTCGCCTTGT+CGG | 0.445887 | 3_1:+75401915 | None:intergenic |
| ATGCTGCTAATATTGGAATC+TGG | 0.446519 | 3_1:+75401636 | None:intergenic |
| CATGTAGGCTGCAATTCTTT+GGG | 0.448246 | 3_1:+75401461 | None:intergenic |
| ATGCAAGGAACCTCCTTCTT+CGG | 0.450058 | 3_1:-75401379 | Msa0375620:CDS |
| AAGTTAAGTTGTACTGTGAT+AGG | 0.450787 | 3_1:-75400561 | Msa0375620:CDS |
| CCAAAGAATTGCAGCCTACA+TGG | 0.451697 | 3_1:-75401460 | Msa0375620:CDS |
| GAGATCAAAACTAGAAGCAT+TGG | 0.459866 | 3_1:-75401820 | Msa0375620:CDS |
| TAGTGACATTGAGGAGGAAG+AGG | 0.468158 | 3_1:-75401778 | Msa0375620:CDS |
| TCTGGAGACGAATACTCCTT+TGG | 0.473491 | 3_1:+75401654 | None:intergenic |
| TGATTCAAACACTTGCTTCG+AGG | 0.476019 | 3_1:-75401200 | Msa0375620:CDS |
| TACTCTTCCTAGAGAGAGCC+AGG | 0.477900 | 3_1:-75400761 | Msa0375620:CDS |
| AGCATATTCTGAATTGGATC+AGG | 0.480387 | 3_1:+75401699 | None:intergenic |
| CGTCAGGCATGTGATGAAGC+TGG | 0.484030 | 3_1:+75400956 | None:intergenic |
| TTGCGTGTGAAGGTGAAGAT+AGG | 0.489717 | 3_1:-75400687 | Msa0375620:CDS |
| TCTCAACATTCATCCTATCC+TGG | 0.491515 | 3_1:+75400743 | None:intergenic |
| GTTGGAGGACTAAAGATCAT+AGG | 0.492091 | 3_1:-75401114 | Msa0375620:CDS |
| AGCGATGCAGATACTGTTCG+AGG | 0.503528 | 3_1:-75401346 | Msa0375620:CDS |
| ACGAGACCAACTTCTTCGCT+TGG | 0.503960 | 3_1:-75400911 | Msa0375620:CDS |
| TTTCGGATCAGATTCGATGA+TGG | 0.505364 | 3_1:-75401883 | Msa0375620:CDS |
| ACATTCATAAAGAAGTTGCT+TGG | 0.509000 | 3_1:+75401572 | None:intergenic |
| ATCCTATCCTGGCTCTCTCT+AGG | 0.512100 | 3_1:+75400754 | None:intergenic |
| TCTTTACCAAGCGAAGAAGT+TGG | 0.520115 | 3_1:+75400905 | None:intergenic |
| TCGCGGGAAAATGGAGAGCT+AGG | 0.521293 | 3_1:-75400648 | Msa0375620:CDS |
| ACGGATCGCTGCACGGACTC+AGG | 0.523145 | 3_1:+75401135 | None:intergenic |
| GAGTCCGTGCAGCGATCCGT+TGG | 0.523823 | 3_1:-75401132 | Msa0375620:CDS |
| GCTGCTAGACGGTCCGAAGA+AGG | 0.532544 | 3_1:+75401366 | None:intergenic |
| GTAGAGATGTCAGAACTAGA+TGG | 0.537559 | 3_1:+75401948 | None:intergenic |
| TCCAAAGCTTGTAACGGTCG+TGG | 0.538799 | 3_1:-75400875 | Msa0375620:CDS |
| TCCGTGCAGCGATCCGTTGG+AGG | 0.540174 | 3_1:-75401129 | Msa0375620:CDS |
| TGGATCTTCTGAGCTACCTC+CGG | 0.544063 | 3_1:-75402144 | Msa0375620:CDS |
| TTATAGAGCTTTGAAATGCA+AGG | 0.546542 | 3_1:-75401394 | Msa0375620:CDS |
| TACAAGATAAAGGAGGAAAA+GGG | 0.547340 | 3_1:-75400538 | Msa0375620:CDS |
| AGAGCTAGGATGACAATGGC+TGG | 0.548519 | 3_1:-75400634 | Msa0375620:CDS |
| GTTCTTCTGTATGCGAGTCA+TGG | 0.548521 | 3_1:+75401979 | None:intergenic |
| CACTAAGCTCTACTCGCTAC+AGG | 0.550442 | 3_1:-75402108 | Msa0375620:CDS |
| CTACCAGTTTCGTGCCGACA+AGG | 0.551302 | 3_1:-75401929 | Msa0375620:CDS |
| ACTTGATTGTTGCTTCAGCA+TGG | 0.554425 | 3_1:-75400486 | Msa0375620:CDS |
| GAGCAACTAGCAGAAGCACT+TGG | 0.557254 | 3_1:-75401081 | Msa0375620:CDS |
| ACTTGATGATAGTGACATTG+AGG | 0.558721 | 3_1:-75401787 | Msa0375620:CDS |
| ATATGGGAATTCTCAAAGCA+TGG | 0.559713 | 3_1:-75401754 | Msa0375620:CDS |
| CCGGTCAATCTAACATGTGA+TGG | 0.566500 | 3_1:+75401168 | None:intergenic |
| CATCACATGTTAGATTGACC+GGG | 0.567991 | 3_1:-75401167 | Msa0375620:CDS |
| AATTGCAGCCTACATGGTGG+AGG | 0.577669 | 3_1:-75401454 | Msa0375620:CDS |
| AAATTTGGGAGGACAAATCA+GGG | 0.579015 | 3_1:+75402072 | None:intergenic |
| TAGGCTGCAATTCTTTGGGA+AGG | 0.583102 | 3_1:+75401465 | None:intergenic |
| TCCTCCAACGGATCGCTGCA+CGG | 0.583327 | 3_1:+75401128 | None:intergenic |
| GAATGTTGAGAGGCAATGCT+TGG | 0.583862 | 3_1:-75400731 | Msa0375620:CDS |
| TGTGCTACTGCAATTTCAGA+AGG | 0.584377 | 3_1:-75401552 | Msa0375620:CDS |
| GCCTGACGAGAGCGTTTCAA+CGG | 0.590858 | 3_1:-75400941 | Msa0375620:CDS |
| TCCGGATTCAGCGAGGCGAG+CGG | 0.592435 | 3_1:+75401425 | None:intergenic |
| GTTAATACGGTTGCGTGTGA+AGG | 0.601943 | 3_1:-75400697 | Msa0375620:CDS |
| AATACTCCTTTGGTGAGTCA+TGG | 0.604923 | 3_1:+75401664 | None:intergenic |
| TATGATCTTTAGTCCTCCAA+CGG | 0.609253 | 3_1:+75401116 | None:intergenic |
| GTATCTGCATCGCTGCTAGA+CGG | 0.609923 | 3_1:+75401355 | None:intergenic |
| ATTCATAAAGAAGTTGCTTG+GGG | 0.610084 | 3_1:+75401574 | None:intergenic |
| ATAGAACGGTATGAAGTCGC+GGG | 0.612894 | 3_1:-75400664 | Msa0375620:CDS |
| GATAGAACGGTATGAAGTCG+CGG | 0.616637 | 3_1:-75400665 | Msa0375620:CDS |
| GGACTCAGGATCATCAATCC+CGG | 0.619156 | 3_1:+75401149 | None:intergenic |
| TCGTCGTGGAGAAGCTCTTG+TGG | 0.619304 | 3_1:-75400992 | Msa0375620:CDS |
| CCTTTGGTGAGTCATGGTCA+TGG | 0.621918 | 3_1:+75401670 | None:intergenic |
| TTTGAATCCAAAGCTTGTAA+CGG | 0.624695 | 3_1:-75400881 | Msa0375620:CDS |
| AAGGTGAAGATAGGATAGAA+CGG | 0.625100 | 3_1:-75400678 | Msa0375620:CDS |
| TTCCTAGAGAGAGCCAGGAT+AGG | 0.625909 | 3_1:-75400756 | Msa0375620:CDS |
| ATCAGAATAAGAAATTTGGG+AGG | 0.632444 | 3_1:+75402061 | None:intergenic |
| TCGATGCTTGATTGTCGTCG+TGG | 0.642078 | 3_1:-75401006 | Msa0375620:CDS |
| AGAAGATCCAATTAATGACA+TGG | 0.650375 | 3_1:+75402157 | None:intergenic |
| ATTGCAGCCTACATGGTGGA+GGG | 0.650477 | 3_1:-75401453 | Msa0375620:CDS |
| GGCGAGTCCCTCCACCATGT+AGG | 0.652264 | 3_1:+75401446 | None:intergenic |
| GCTAGACGGTCCGAAGAAGG+AGG | 0.655079 | 3_1:+75401369 | None:intergenic |
| TTCATAAAGAAGTTGCTTGG+GGG | 0.656482 | 3_1:+75401575 | None:intergenic |
| AGGATAGGATGAATGTTGAG+AGG | 0.660140 | 3_1:-75400741 | Msa0375620:CDS |
| TGATGATAGTGACATTGAGG+AGG | 0.661914 | 3_1:-75401784 | Msa0375620:CDS |
| AATTTCAGAAGGAAATGAAG+AGG | 0.662867 | 3_1:-75401541 | Msa0375620:CDS |
| ATGGAGAGCTAGGATGACAA+TGG | 0.667953 | 3_1:-75400638 | Msa0375620:CDS |
| CCATGACCATGACTCACCAA+AGG | 0.671972 | 3_1:-75401670 | Msa0375620:CDS |
| CTTGAATTGAGACAATTCGT+CGG | 0.672967 | 3_1:+75401493 | None:intergenic |
| AATTTCGAGCGGTCTCATCG+AGG | 0.679065 | 3_1:-75401047 | Msa0375620:CDS |
| TTTGTCATTTGAATTTCGAG+CGG | 0.680630 | 3_1:-75401058 | Msa0375620:CDS |
| ATAAACCCAAATTTAAAACA+CGG | 0.682127 | 3_1:+75401318 | None:intergenic |
| AAGAATTGCAGCCTACATGG+TGG | 0.682524 | 3_1:-75401457 | Msa0375620:CDS |
| TTCGTGCCGACAAGGCGACG+TGG | 0.686779 | 3_1:-75401921 | Msa0375620:CDS |
| TGATAGGTACAAGATAAAGG+AGG | 0.692576 | 3_1:-75400545 | Msa0375620:CDS |
| ACGACAATCAAGCATCGATG+AGG | 0.692866 | 3_1:+75401011 | None:intergenic |
| GATGATGGAAAATCGAAACG+TGG | 0.720441 | 3_1:-75401868 | Msa0375620:CDS |
| TGATTGTTGCTTCAGCATGG+AGG | 0.748962 | 3_1:-75400483 | Msa0375620:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATCAGAATAAGAAATTT+GGG | + | chr3_1:75400580-75400599 | None:intergenic | 15.0% |
| !!! | AGAAATTTTTGTTATTTCTT+TGG | + | chr3_1:75401036-75401055 | None:intergenic | 15.0% |
| !! | AAGAAATAACAAAAATTTCT+AGG | - | chr3_1:75401036-75401055 | Msa0375620:CDS | 15.0% |
| !! | TTTATCAGAATAAGAAATTT+GGG | + | chr3_1:75400580-75400599 | None:intergenic | 15.0% |
| !!! | AGAAATTTTTGTTATTTCTT+TGG | + | chr3_1:75401036-75401055 | None:intergenic | 15.0% |
| !! | AAGAAATAACAAAAATTTCT+AGG | - | chr3_1:75401036-75401055 | Msa0375620:CDS | 15.0% |
| !! | GTTTATCAGAATAAGAAATT+TGG | + | chr3_1:75400581-75400600 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTATTTCTTTGG+TGG | + | chr3_1:75401033-75401052 | None:intergenic | 20.0% |
| !!! | ATAAACCCAAATTTAAAACA+CGG | + | chr3_1:75401320-75401339 | None:intergenic | 20.0% |
| !!! | ATAGATTTTGATATCAATCA+AGG | - | chr3_1:75401395-75401414 | Msa0375620:CDS | 20.0% |
| !! | GTTTATCAGAATAAGAAATT+TGG | + | chr3_1:75400581-75400600 | None:intergenic | 20.0% |
| !!! | AATTTTTGTTATTTCTTTGG+TGG | + | chr3_1:75401033-75401052 | None:intergenic | 20.0% |
| !!! | ATAAACCCAAATTTAAAACA+CGG | + | chr3_1:75401320-75401339 | None:intergenic | 20.0% |
| !!! | ATAGATTTTGATATCAATCA+AGG | - | chr3_1:75401395-75401414 | Msa0375620:CDS | 20.0% |
| ! | TTGATCCTAACATTATTGAT+TGG | - | chr3_1:75400907-75400926 | Msa0375620:CDS | 25.0% |
| !! | TGATCCTAACATTATTGATT+GGG | - | chr3_1:75400908-75400927 | Msa0375620:CDS | 25.0% |
| !!! | AGCTCTATAAATACTTTTTC+CGG | + | chr3_1:75401231-75401250 | None:intergenic | 25.0% |
| !!! | TTTGTCCGTGTTTTAAATTT+GGG | - | chr3_1:75401312-75401331 | Msa0375620:CDS | 25.0% |
| !!! | AGTACAACTTAACTTGTTTT+CGG | + | chr3_1:75402069-75402088 | None:intergenic | 25.0% |
| ! | TTGATCCTAACATTATTGAT+TGG | - | chr3_1:75400907-75400926 | Msa0375620:CDS | 25.0% |
| !! | TGATCCTAACATTATTGATT+GGG | - | chr3_1:75400908-75400927 | Msa0375620:CDS | 25.0% |
| !!! | AGCTCTATAAATACTTTTTC+CGG | + | chr3_1:75401231-75401250 | None:intergenic | 25.0% |
| !!! | TTTGTCCGTGTTTTAAATTT+GGG | - | chr3_1:75401312-75401331 | Msa0375620:CDS | 25.0% |
| !!! | AGTACAACTTAACTTGTTTT+CGG | + | chr3_1:75402069-75402088 | None:intergenic | 25.0% |
| !! | TTAGTGTTTTTATGTGATGC+CGG | + | chr3_1:75400513-75400532 | None:intergenic | 30.0% |
| ATCAGAATAAGAAATTTGGG+AGG | + | chr3_1:75400577-75400596 | None:intergenic | 30.0% | |
| ATTCATAAAGAAGTTGCTTG+GGG | + | chr3_1:75401064-75401083 | None:intergenic | 30.0% | |
| CATTCATAAAGAAGTTGCTT+GGG | + | chr3_1:75401065-75401084 | None:intergenic | 30.0% | |
| ACATTCATAAAGAAGTTGCT+TGG | + | chr3_1:75401066-75401085 | None:intergenic | 30.0% | |
| AATTTCAGAAGGAAATGAAG+AGG | - | chr3_1:75401094-75401113 | Msa0375620:CDS | 30.0% | |
| !! | TTATAGAGCTTTGAAATGCA+AGG | - | chr3_1:75401241-75401260 | Msa0375620:CDS | 30.0% |
| !! | GTTTGTCCGTGTTTTAAATT+TGG | - | chr3_1:75401311-75401330 | Msa0375620:CDS | 30.0% |
| ! | TTTGTCATTTGAATTTCGAG+CGG | - | chr3_1:75401577-75401596 | Msa0375620:CDS | 30.0% |
| TTTGAATCCAAAGCTTGTAA+CGG | - | chr3_1:75401754-75401773 | Msa0375620:CDS | 30.0% | |
| TCAACAAATCTCTGCAAAAA+CGG | + | chr3_1:75401812-75401831 | None:intergenic | 30.0% | |
| GGCAAGAGATATTGTTAATA+CGG | - | chr3_1:75401925-75401944 | Msa0375620:CDS | 30.0% | |
| ! | AAGTTAAGTTGTACTGTGAT+AGG | - | chr3_1:75402074-75402093 | Msa0375620:CDS | 30.0% |
| TACAAGATAAAGGAGGAAAA+GGG | - | chr3_1:75402097-75402116 | Msa0375620:CDS | 30.0% | |
| !! | TTAGTGTTTTTATGTGATGC+CGG | + | chr3_1:75400513-75400532 | None:intergenic | 30.0% |
| ATCAGAATAAGAAATTTGGG+AGG | + | chr3_1:75400577-75400596 | None:intergenic | 30.0% | |
| ATTCATAAAGAAGTTGCTTG+GGG | + | chr3_1:75401064-75401083 | None:intergenic | 30.0% | |
| CATTCATAAAGAAGTTGCTT+GGG | + | chr3_1:75401065-75401084 | None:intergenic | 30.0% | |
| ACATTCATAAAGAAGTTGCT+TGG | + | chr3_1:75401066-75401085 | None:intergenic | 30.0% | |
| AATTTCAGAAGGAAATGAAG+AGG | - | chr3_1:75401094-75401113 | Msa0375620:CDS | 30.0% | |
| !! | TTATAGAGCTTTGAAATGCA+AGG | - | chr3_1:75401241-75401260 | Msa0375620:CDS | 30.0% |
| !! | GTTTGTCCGTGTTTTAAATT+TGG | - | chr3_1:75401311-75401330 | Msa0375620:CDS | 30.0% |
| ! | TTTGTCATTTGAATTTCGAG+CGG | - | chr3_1:75401577-75401596 | Msa0375620:CDS | 30.0% |
| TTTGAATCCAAAGCTTGTAA+CGG | - | chr3_1:75401754-75401773 | Msa0375620:CDS | 30.0% | |
| TCAACAAATCTCTGCAAAAA+CGG | + | chr3_1:75401812-75401831 | None:intergenic | 30.0% | |
| GGCAAGAGATATTGTTAATA+CGG | - | chr3_1:75401925-75401944 | Msa0375620:CDS | 30.0% | |
| ! | AAGTTAAGTTGTACTGTGAT+AGG | - | chr3_1:75402074-75402093 | Msa0375620:CDS | 30.0% |
| TACAAGATAAAGGAGGAAAA+GGG | - | chr3_1:75402097-75402116 | Msa0375620:CDS | 30.0% | |
| AAATTTGGGAGGACAAATCA+GGG | + | chr3_1:75400566-75400585 | None:intergenic | 35.0% | |
| GTGGATTCAATTGAAGTTGA+TGG | - | chr3_1:75400786-75400805 | Msa0375620:CDS | 35.0% | |
| ! | GAGATCAAAACTAGAAGCAT+TGG | - | chr3_1:75400815-75400834 | Msa0375620:CDS | 35.0% |
| ! | ACTTGATGATAGTGACATTG+AGG | - | chr3_1:75400848-75400867 | Msa0375620:CDS | 35.0% |
| ATATGGGAATTCTCAAAGCA+TGG | - | chr3_1:75400881-75400900 | Msa0375620:CDS | 35.0% | |
| TCAGCCCAATCAATAATGTT+AGG | + | chr3_1:75400915-75400934 | None:intergenic | 35.0% | |
| AGCATATTCTGAATTGGATC+AGG | + | chr3_1:75400939-75400958 | None:intergenic | 35.0% | |
| AACAGCAGCATATTCTGAAT+TGG | + | chr3_1:75400945-75400964 | None:intergenic | 35.0% | |
| ATGCTGCTAATATTGGAATC+TGG | + | chr3_1:75401002-75401021 | None:intergenic | 35.0% | |
| TTCATAAAGAAGTTGCTTGG+GGG | + | chr3_1:75401063-75401082 | None:intergenic | 35.0% | |
| CTTGAATTGAGACAATTCGT+CGG | + | chr3_1:75401145-75401164 | None:intergenic | 35.0% | |
| TATGATCTTTAGTCCTCCAA+CGG | + | chr3_1:75401522-75401541 | None:intergenic | 35.0% | |
| AACAAATCTCTGCAAAAACG+GGG | + | chr3_1:75401810-75401829 | None:intergenic | 35.0% | |
| CAACAAATCTCTGCAAAAAC+GGG | + | chr3_1:75401811-75401830 | None:intergenic | 35.0% | |
| AAGGTGAAGATAGGATAGAA+CGG | - | chr3_1:75401957-75401976 | Msa0375620:CDS | 35.0% | |
| CTGTGATAGGTACAAGATAA+AGG | - | chr3_1:75402087-75402106 | Msa0375620:CDS | 35.0% | |
| TGATAGGTACAAGATAAAGG+AGG | - | chr3_1:75402090-75402109 | Msa0375620:CDS | 35.0% | |
| GTACAAGATAAAGGAGGAAA+AGG | - | chr3_1:75402096-75402115 | Msa0375620:CDS | 35.0% | |
| AAATTTGGGAGGACAAATCA+GGG | + | chr3_1:75400566-75400585 | None:intergenic | 35.0% | |
| GTGGATTCAATTGAAGTTGA+TGG | - | chr3_1:75400786-75400805 | Msa0375620:CDS | 35.0% | |
| ! | GAGATCAAAACTAGAAGCAT+TGG | - | chr3_1:75400815-75400834 | Msa0375620:CDS | 35.0% |
| ! | ACTTGATGATAGTGACATTG+AGG | - | chr3_1:75400848-75400867 | Msa0375620:CDS | 35.0% |
| ATATGGGAATTCTCAAAGCA+TGG | - | chr3_1:75400881-75400900 | Msa0375620:CDS | 35.0% | |
| TCAGCCCAATCAATAATGTT+AGG | + | chr3_1:75400915-75400934 | None:intergenic | 35.0% | |
| AGCATATTCTGAATTGGATC+AGG | + | chr3_1:75400939-75400958 | None:intergenic | 35.0% | |
| AACAGCAGCATATTCTGAAT+TGG | + | chr3_1:75400945-75400964 | None:intergenic | 35.0% | |
| ATGCTGCTAATATTGGAATC+TGG | + | chr3_1:75401002-75401021 | None:intergenic | 35.0% | |
| TTCATAAAGAAGTTGCTTGG+GGG | + | chr3_1:75401063-75401082 | None:intergenic | 35.0% | |
| CTTGAATTGAGACAATTCGT+CGG | + | chr3_1:75401145-75401164 | None:intergenic | 35.0% | |
| TATGATCTTTAGTCCTCCAA+CGG | + | chr3_1:75401522-75401541 | None:intergenic | 35.0% | |
| AACAAATCTCTGCAAAAACG+GGG | + | chr3_1:75401810-75401829 | None:intergenic | 35.0% | |
| CAACAAATCTCTGCAAAAAC+GGG | + | chr3_1:75401811-75401830 | None:intergenic | 35.0% | |
| AAGGTGAAGATAGGATAGAA+CGG | - | chr3_1:75401957-75401976 | Msa0375620:CDS | 35.0% | |
| CTGTGATAGGTACAAGATAA+AGG | - | chr3_1:75402087-75402106 | Msa0375620:CDS | 35.0% | |
| TGATAGGTACAAGATAAAGG+AGG | - | chr3_1:75402090-75402109 | Msa0375620:CDS | 35.0% | |
| GTACAAGATAAAGGAGGAAA+AGG | - | chr3_1:75402096-75402115 | Msa0375620:CDS | 35.0% | |
| GAAATTTGGGAGGACAAATC+AGG | + | chr3_1:75400567-75400586 | None:intergenic | 40.0% | |
| GTAGAGATGTCAGAACTAGA+TGG | + | chr3_1:75400690-75400709 | None:intergenic | 40.0% | |
| CATCGAATCTGATCCGAAAT+TGG | + | chr3_1:75400751-75400770 | None:intergenic | 40.0% | |
| TTTCGGATCAGATTCGATGA+TGG | - | chr3_1:75400752-75400771 | Msa0375620:CDS | 40.0% | |
| !! | GATGATGGAAAATCGAAACG+TGG | - | chr3_1:75400767-75400786 | Msa0375620:CDS | 40.0% |
| ! | TGATGATAGTGACATTGAGG+AGG | - | chr3_1:75400851-75400870 | Msa0375620:CDS | 40.0% |
| ATTGAGGAGGAAGAGGAATA+TGG | - | chr3_1:75400864-75400883 | Msa0375620:CDS | 40.0% | |
| TTGAGGAGGAAGAGGAATAT+GGG | - | chr3_1:75400865-75400884 | Msa0375620:CDS | 40.0% | |
| AATACTCCTTTGGTGAGTCA+TGG | + | chr3_1:75400974-75400993 | None:intergenic | 40.0% | |
| GCTACTGATGCTGCTAATAT+TGG | + | chr3_1:75401009-75401028 | None:intergenic | 40.0% | |
| ! | TGTGCTACTGCAATTTCAGA+AGG | - | chr3_1:75401083-75401102 | Msa0375620:CDS | 40.0% |
| CGACGAATTGTCTCAATTCA+AGG | - | chr3_1:75401143-75401162 | Msa0375620:CDS | 40.0% | |
| CATGTAGGCTGCAATTCTTT+GGG | + | chr3_1:75401177-75401196 | None:intergenic | 40.0% | |
| CGAAGCAAGTGTTTGAATCA+TGG | + | chr3_1:75401435-75401454 | None:intergenic | 40.0% | |
| TGATTCAAACACTTGCTTCG+AGG | - | chr3_1:75401435-75401454 | Msa0375620:CDS | 40.0% | |
| CCATCACATGTTAGATTGAC+CGG | - | chr3_1:75401467-75401486 | Msa0375620:CDS | 40.0% | |
| CATCACATGTTAGATTGACC+GGG | - | chr3_1:75401468-75401487 | Msa0375620:CDS | 40.0% | |
| GTTGGAGGACTAAAGATCAT+AGG | - | chr3_1:75401521-75401540 | Msa0375620:CDS | 40.0% | |
| TCTTTACCAAGCGAAGAAGT+TGG | + | chr3_1:75401733-75401752 | None:intergenic | 40.0% | |
| TCTCAACATTCATCCTATCC+TGG | + | chr3_1:75401895-75401914 | None:intergenic | 40.0% | |
| AGGATAGGATGAATGTTGAG+AGG | - | chr3_1:75401894-75401913 | Msa0375620:CDS | 40.0% | |
| TCACTCACATTTGTGCTCAT+TGG | + | chr3_1:75402040-75402059 | None:intergenic | 40.0% | |
| !! | GAAAAGGGTGCACTTCATTT+TGG | - | chr3_1:75402112-75402131 | Msa0375620:CDS | 40.0% |
| ! | ACTTGATTGTTGCTTCAGCA+TGG | - | chr3_1:75402149-75402168 | Msa0375620:CDS | 40.0% |
| GAAATTTGGGAGGACAAATC+AGG | + | chr3_1:75400567-75400586 | None:intergenic | 40.0% | |
| GTAGAGATGTCAGAACTAGA+TGG | + | chr3_1:75400690-75400709 | None:intergenic | 40.0% | |
| CATCGAATCTGATCCGAAAT+TGG | + | chr3_1:75400751-75400770 | None:intergenic | 40.0% | |
| TTTCGGATCAGATTCGATGA+TGG | - | chr3_1:75400752-75400771 | Msa0375620:CDS | 40.0% | |
| !! | GATGATGGAAAATCGAAACG+TGG | - | chr3_1:75400767-75400786 | Msa0375620:CDS | 40.0% |
| ! | TGATGATAGTGACATTGAGG+AGG | - | chr3_1:75400851-75400870 | Msa0375620:CDS | 40.0% |
| ATTGAGGAGGAAGAGGAATA+TGG | - | chr3_1:75400864-75400883 | Msa0375620:CDS | 40.0% | |
| TTGAGGAGGAAGAGGAATAT+GGG | - | chr3_1:75400865-75400884 | Msa0375620:CDS | 40.0% | |
| AATACTCCTTTGGTGAGTCA+TGG | + | chr3_1:75400974-75400993 | None:intergenic | 40.0% | |
| GCTACTGATGCTGCTAATAT+TGG | + | chr3_1:75401009-75401028 | None:intergenic | 40.0% | |
| ! | TGTGCTACTGCAATTTCAGA+AGG | - | chr3_1:75401083-75401102 | Msa0375620:CDS | 40.0% |
| CGACGAATTGTCTCAATTCA+AGG | - | chr3_1:75401143-75401162 | Msa0375620:CDS | 40.0% | |
| CATGTAGGCTGCAATTCTTT+GGG | + | chr3_1:75401177-75401196 | None:intergenic | 40.0% | |
| CGAAGCAAGTGTTTGAATCA+TGG | + | chr3_1:75401435-75401454 | None:intergenic | 40.0% | |
| TGATTCAAACACTTGCTTCG+AGG | - | chr3_1:75401435-75401454 | Msa0375620:CDS | 40.0% | |
| CCATCACATGTTAGATTGAC+CGG | - | chr3_1:75401467-75401486 | Msa0375620:CDS | 40.0% | |
| CATCACATGTTAGATTGACC+GGG | - | chr3_1:75401468-75401487 | Msa0375620:CDS | 40.0% | |
| GTTGGAGGACTAAAGATCAT+AGG | - | chr3_1:75401521-75401540 | Msa0375620:CDS | 40.0% | |
| TCTTTACCAAGCGAAGAAGT+TGG | + | chr3_1:75401733-75401752 | None:intergenic | 40.0% | |
| TCTCAACATTCATCCTATCC+TGG | + | chr3_1:75401895-75401914 | None:intergenic | 40.0% | |
| AGGATAGGATGAATGTTGAG+AGG | - | chr3_1:75401894-75401913 | Msa0375620:CDS | 40.0% | |
| TCACTCACATTTGTGCTCAT+TGG | + | chr3_1:75402040-75402059 | None:intergenic | 40.0% | |
| !! | GAAAAGGGTGCACTTCATTT+TGG | - | chr3_1:75402112-75402131 | Msa0375620:CDS | 40.0% |
| ! | ACTTGATTGTTGCTTCAGCA+TGG | - | chr3_1:75402149-75402168 | Msa0375620:CDS | 40.0% |
| !! | GTGTTTTTATGTGATGCCGG+AGG | + | chr3_1:75400510-75400529 | None:intergenic | 45.0% |
| GTTCTTCTGTATGCGAGTCA+TGG | + | chr3_1:75400659-75400678 | None:intergenic | 45.0% | |
| !! | GGTGCTGATCAGTCCAATTT+CGG | - | chr3_1:75400735-75400754 | Msa0375620:CDS | 45.0% |
| TAGTGACATTGAGGAGGAAG+AGG | - | chr3_1:75400857-75400876 | Msa0375620:CDS | 45.0% | |
| TCTGGAGACGAATACTCCTT+TGG | + | chr3_1:75400984-75401003 | None:intergenic | 45.0% | |
| ! | TAGGCTGCAATTCTTTGGGA+AGG | + | chr3_1:75401173-75401192 | None:intergenic | 45.0% |
| CCATGTAGGCTGCAATTCTT+TGG | + | chr3_1:75401178-75401197 | None:intergenic | 45.0% | |
| CCAAAGAATTGCAGCCTACA+TGG | - | chr3_1:75401175-75401194 | Msa0375620:CDS | 45.0% | |
| AAGAATTGCAGCCTACATGG+TGG | - | chr3_1:75401178-75401197 | Msa0375620:CDS | 45.0% | |
| !!! | TACTTTTTCCGGATTCAGCG+AGG | + | chr3_1:75401220-75401239 | None:intergenic | 45.0% |
| ATGCAAGGAACCTCCTTCTT+CGG | - | chr3_1:75401256-75401275 | Msa0375620:CDS | 45.0% | |
| CCGGTCAATCTAACATGTGA+TGG | + | chr3_1:75401470-75401489 | None:intergenic | 45.0% | |
| !! | ACGACAATCAAGCATCGATG+AGG | + | chr3_1:75401627-75401646 | None:intergenic | 45.0% |
| GAATGTTGAGAGGCAATGCT+TGG | - | chr3_1:75401904-75401923 | Msa0375620:CDS | 45.0% | |
| GTTAATACGGTTGCGTGTGA+AGG | - | chr3_1:75401938-75401957 | Msa0375620:CDS | 45.0% | |
| TTGCGTGTGAAGGTGAAGAT+AGG | - | chr3_1:75401948-75401967 | Msa0375620:CDS | 45.0% | |
| GATAGAACGGTATGAAGTCG+CGG | - | chr3_1:75401970-75401989 | Msa0375620:CDS | 45.0% | |
| ATAGAACGGTATGAAGTCGC+GGG | - | chr3_1:75401971-75401990 | Msa0375620:CDS | 45.0% | |
| ATGGAGAGCTAGGATGACAA+TGG | - | chr3_1:75401997-75402016 | Msa0375620:CDS | 45.0% | |
| !! | AGGGTGCACTTCATTTTGGT+TGG | - | chr3_1:75402116-75402135 | Msa0375620:CDS | 45.0% |
| !!! | GGGTGCACTTCATTTTGGTT+GGG | - | chr3_1:75402117-75402136 | Msa0375620:CDS | 45.0% |
| ! | TGATTGTTGCTTCAGCATGG+AGG | - | chr3_1:75402152-75402171 | Msa0375620:CDS | 45.0% |
| !! | GTGTTTTTATGTGATGCCGG+AGG | + | chr3_1:75400510-75400529 | None:intergenic | 45.0% |
| GTTCTTCTGTATGCGAGTCA+TGG | + | chr3_1:75400659-75400678 | None:intergenic | 45.0% | |
| !! | GGTGCTGATCAGTCCAATTT+CGG | - | chr3_1:75400735-75400754 | Msa0375620:CDS | 45.0% |
| TAGTGACATTGAGGAGGAAG+AGG | - | chr3_1:75400857-75400876 | Msa0375620:CDS | 45.0% | |
| TCTGGAGACGAATACTCCTT+TGG | + | chr3_1:75400984-75401003 | None:intergenic | 45.0% | |
| ! | TAGGCTGCAATTCTTTGGGA+AGG | + | chr3_1:75401173-75401192 | None:intergenic | 45.0% |
| CCATGTAGGCTGCAATTCTT+TGG | + | chr3_1:75401178-75401197 | None:intergenic | 45.0% | |
| CCAAAGAATTGCAGCCTACA+TGG | - | chr3_1:75401175-75401194 | Msa0375620:CDS | 45.0% | |
| AAGAATTGCAGCCTACATGG+TGG | - | chr3_1:75401178-75401197 | Msa0375620:CDS | 45.0% | |
| !!! | TACTTTTTCCGGATTCAGCG+AGG | + | chr3_1:75401220-75401239 | None:intergenic | 45.0% |
| ATGCAAGGAACCTCCTTCTT+CGG | - | chr3_1:75401256-75401275 | Msa0375620:CDS | 45.0% | |
| CCGGTCAATCTAACATGTGA+TGG | + | chr3_1:75401470-75401489 | None:intergenic | 45.0% | |
| !! | ACGACAATCAAGCATCGATG+AGG | + | chr3_1:75401627-75401646 | None:intergenic | 45.0% |
| GAATGTTGAGAGGCAATGCT+TGG | - | chr3_1:75401904-75401923 | Msa0375620:CDS | 45.0% | |
| GTTAATACGGTTGCGTGTGA+AGG | - | chr3_1:75401938-75401957 | Msa0375620:CDS | 45.0% | |
| TTGCGTGTGAAGGTGAAGAT+AGG | - | chr3_1:75401948-75401967 | Msa0375620:CDS | 45.0% | |
| GATAGAACGGTATGAAGTCG+CGG | - | chr3_1:75401970-75401989 | Msa0375620:CDS | 45.0% | |
| ATAGAACGGTATGAAGTCGC+GGG | - | chr3_1:75401971-75401990 | Msa0375620:CDS | 45.0% | |
| ATGGAGAGCTAGGATGACAA+TGG | - | chr3_1:75401997-75402016 | Msa0375620:CDS | 45.0% | |
| !! | AGGGTGCACTTCATTTTGGT+TGG | - | chr3_1:75402116-75402135 | Msa0375620:CDS | 45.0% |
| !!! | GGGTGCACTTCATTTTGGTT+GGG | - | chr3_1:75402117-75402136 | Msa0375620:CDS | 45.0% |
| ! | TGATTGTTGCTTCAGCATGG+AGG | - | chr3_1:75402152-75402171 | Msa0375620:CDS | 45.0% |
| TGGATCTTCTGAGCTACCTC+CGG | - | chr3_1:75400491-75400510 | Msa0375620:CDS | 50.0% | |
| CACTAAGCTCTACTCGCTAC+AGG | - | chr3_1:75400527-75400546 | Msa0375620:CDS | 50.0% | |
| CCTTTGGTGAGTCATGGTCA+TGG | + | chr3_1:75400968-75400987 | None:intergenic | 50.0% | |
| CCATGACCATGACTCACCAA+AGG | - | chr3_1:75400965-75400984 | Msa0375620:CDS | 50.0% | |
| AATTGCAGCCTACATGGTGG+AGG | - | chr3_1:75401181-75401200 | Msa0375620:CDS | 50.0% | |
| ! | ATTGCAGCCTACATGGTGGA+GGG | - | chr3_1:75401182-75401201 | Msa0375620:CDS | 50.0% |
| GTATCTGCATCGCTGCTAGA+CGG | + | chr3_1:75401283-75401302 | None:intergenic | 50.0% | |
| AGCGATGCAGATACTGTTCG+AGG | - | chr3_1:75401289-75401308 | Msa0375620:CDS | 50.0% | |
| GGACTCAGGATCATCAATCC+CGG | + | chr3_1:75401489-75401508 | None:intergenic | 50.0% | |
| !! | GAGCAACTAGCAGAAGCACT+TGG | - | chr3_1:75401554-75401573 | Msa0375620:CDS | 50.0% |
| AATTTCGAGCGGTCTCATCG+AGG | - | chr3_1:75401588-75401607 | Msa0375620:CDS | 50.0% | |
| TCGATGCTTGATTGTCGTCG+TGG | - | chr3_1:75401629-75401648 | Msa0375620:CDS | 50.0% | |
| ACGAGACCAACTTCTTCGCT+TGG | - | chr3_1:75401724-75401743 | Msa0375620:CDS | 50.0% | |
| TCCAAAGCTTGTAACGGTCG+TGG | - | chr3_1:75401760-75401779 | Msa0375620:CDS | 50.0% | |
| TCCACGACCGTTACAAGCTT+TGG | + | chr3_1:75401764-75401783 | None:intergenic | 50.0% | |
| CTGCAAAAACGGGGCAGTAT+TGG | + | chr3_1:75401801-75401820 | None:intergenic | 50.0% | |
| TACTCTTCCTAGAGAGAGCC+AGG | - | chr3_1:75401874-75401893 | Msa0375620:CDS | 50.0% | |
| TTCCTAGAGAGAGCCAGGAT+AGG | - | chr3_1:75401879-75401898 | Msa0375620:CDS | 50.0% | |
| ! | ATCCTATCCTGGCTCTCTCT+AGG | + | chr3_1:75401884-75401903 | None:intergenic | 50.0% |
| GGTATGAAGTCGCGGGAAAA+TGG | - | chr3_1:75401978-75401997 | Msa0375620:CDS | 50.0% | |
| AGAGCTAGGATGACAATGGC+TGG | - | chr3_1:75402001-75402020 | Msa0375620:CDS | 50.0% | |
| TGGATCTTCTGAGCTACCTC+CGG | - | chr3_1:75400491-75400510 | Msa0375620:CDS | 50.0% | |
| CACTAAGCTCTACTCGCTAC+AGG | - | chr3_1:75400527-75400546 | Msa0375620:CDS | 50.0% | |
| CCTTTGGTGAGTCATGGTCA+TGG | + | chr3_1:75400968-75400987 | None:intergenic | 50.0% | |
| CCATGACCATGACTCACCAA+AGG | - | chr3_1:75400965-75400984 | Msa0375620:CDS | 50.0% | |
| AATTGCAGCCTACATGGTGG+AGG | - | chr3_1:75401181-75401200 | Msa0375620:CDS | 50.0% | |
| ! | ATTGCAGCCTACATGGTGGA+GGG | - | chr3_1:75401182-75401201 | Msa0375620:CDS | 50.0% |
| GTATCTGCATCGCTGCTAGA+CGG | + | chr3_1:75401283-75401302 | None:intergenic | 50.0% | |
| AGCGATGCAGATACTGTTCG+AGG | - | chr3_1:75401289-75401308 | Msa0375620:CDS | 50.0% | |
| GGACTCAGGATCATCAATCC+CGG | + | chr3_1:75401489-75401508 | None:intergenic | 50.0% | |
| !! | GAGCAACTAGCAGAAGCACT+TGG | - | chr3_1:75401554-75401573 | Msa0375620:CDS | 50.0% |
| AATTTCGAGCGGTCTCATCG+AGG | - | chr3_1:75401588-75401607 | Msa0375620:CDS | 50.0% | |
| TCGATGCTTGATTGTCGTCG+TGG | - | chr3_1:75401629-75401648 | Msa0375620:CDS | 50.0% | |
| ACGAGACCAACTTCTTCGCT+TGG | - | chr3_1:75401724-75401743 | Msa0375620:CDS | 50.0% | |
| TCCAAAGCTTGTAACGGTCG+TGG | - | chr3_1:75401760-75401779 | Msa0375620:CDS | 50.0% | |
| TCCACGACCGTTACAAGCTT+TGG | + | chr3_1:75401764-75401783 | None:intergenic | 50.0% | |
| CTGCAAAAACGGGGCAGTAT+TGG | + | chr3_1:75401801-75401820 | None:intergenic | 50.0% | |
| TACTCTTCCTAGAGAGAGCC+AGG | - | chr3_1:75401874-75401893 | Msa0375620:CDS | 50.0% | |
| TTCCTAGAGAGAGCCAGGAT+AGG | - | chr3_1:75401879-75401898 | Msa0375620:CDS | 50.0% | |
| ! | ATCCTATCCTGGCTCTCTCT+AGG | + | chr3_1:75401884-75401903 | None:intergenic | 50.0% |
| GGTATGAAGTCGCGGGAAAA+TGG | - | chr3_1:75401978-75401997 | Msa0375620:CDS | 50.0% | |
| AGAGCTAGGATGACAATGGC+TGG | - | chr3_1:75402001-75402020 | Msa0375620:CDS | 50.0% | |
| ! | CTACCAGTTTCGTGCCGACA+AGG | - | chr3_1:75400706-75400725 | Msa0375620:CDS | 55.0% |
| TCGTCGTGGAGAAGCTCTTG+TGG | - | chr3_1:75401643-75401662 | Msa0375620:CDS | 55.0% | |
| CGTCAGGCATGTGATGAAGC+TGG | + | chr3_1:75401682-75401701 | None:intergenic | 55.0% | |
| !! | GCCTGACGAGAGCGTTTCAA+CGG | - | chr3_1:75401694-75401713 | Msa0375620:CDS | 55.0% |
| ACCGTTGAAACGCTCTCGTC+AGG | + | chr3_1:75401698-75401717 | None:intergenic | 55.0% | |
| TCGCGGGAAAATGGAGAGCT+AGG | - | chr3_1:75401987-75402006 | Msa0375620:CDS | 55.0% | |
| ! | CTACCAGTTTCGTGCCGACA+AGG | - | chr3_1:75400706-75400725 | Msa0375620:CDS | 55.0% |
| TCGTCGTGGAGAAGCTCTTG+TGG | - | chr3_1:75401643-75401662 | Msa0375620:CDS | 55.0% | |
| CGTCAGGCATGTGATGAAGC+TGG | + | chr3_1:75401682-75401701 | None:intergenic | 55.0% | |
| !! | GCCTGACGAGAGCGTTTCAA+CGG | - | chr3_1:75401694-75401713 | Msa0375620:CDS | 55.0% |
| ACCGTTGAAACGCTCTCGTC+AGG | + | chr3_1:75401698-75401717 | None:intergenic | 55.0% | |
| TCGCGGGAAAATGGAGAGCT+AGG | - | chr3_1:75401987-75402006 | Msa0375620:CDS | 55.0% | |
| TCGCCTTGTCGGCACGAAAC+TGG | + | chr3_1:75400712-75400731 | None:intergenic | 60.0% | |
| TCAGCACCACGTCGCCTTGT+CGG | + | chr3_1:75400723-75400742 | None:intergenic | 60.0% | |
| GCTAGACGGTCCGAAGAAGG+AGG | + | chr3_1:75401269-75401288 | None:intergenic | 60.0% | |
| GCTGCTAGACGGTCCGAAGA+AGG | + | chr3_1:75401272-75401291 | None:intergenic | 60.0% | |
| TCCTCCAACGGATCGCTGCA+CGG | + | chr3_1:75401510-75401529 | None:intergenic | 60.0% | |
| TCGCCTTGTCGGCACGAAAC+TGG | + | chr3_1:75400712-75400731 | None:intergenic | 60.0% | |
| TCAGCACCACGTCGCCTTGT+CGG | + | chr3_1:75400723-75400742 | None:intergenic | 60.0% | |
| GCTAGACGGTCCGAAGAAGG+AGG | + | chr3_1:75401269-75401288 | None:intergenic | 60.0% | |
| GCTGCTAGACGGTCCGAAGA+AGG | + | chr3_1:75401272-75401291 | None:intergenic | 60.0% | |
| TCCTCCAACGGATCGCTGCA+CGG | + | chr3_1:75401510-75401529 | None:intergenic | 60.0% | |
| ! | TTCGTGCCGACAAGGCGACG+TGG | - | chr3_1:75400714-75400733 | Msa0375620:CDS | 65.0% |
| GGCGAGTCCCTCCACCATGT+AGG | + | chr3_1:75401192-75401211 | None:intergenic | 65.0% | |
| TCCGGATTCAGCGAGGCGAG+CGG | + | chr3_1:75401213-75401232 | None:intergenic | 65.0% | |
| ACGGATCGCTGCACGGACTC+AGG | + | chr3_1:75401503-75401522 | None:intergenic | 65.0% | |
| GAGTCCGTGCAGCGATCCGT+TGG | - | chr3_1:75401503-75401522 | Msa0375620:CDS | 65.0% | |
| TCCGTGCAGCGATCCGTTGG+AGG | - | chr3_1:75401506-75401525 | Msa0375620:CDS | 65.0% | |
| ! | TTCGTGCCGACAAGGCGACG+TGG | - | chr3_1:75400714-75400733 | Msa0375620:CDS | 65.0% |
| GGCGAGTCCCTCCACCATGT+AGG | + | chr3_1:75401192-75401211 | None:intergenic | 65.0% | |
| TCCGGATTCAGCGAGGCGAG+CGG | + | chr3_1:75401213-75401232 | None:intergenic | 65.0% | |
| ACGGATCGCTGCACGGACTC+AGG | + | chr3_1:75401503-75401522 | None:intergenic | 65.0% | |
| GAGTCCGTGCAGCGATCCGT+TGG | - | chr3_1:75401503-75401522 | Msa0375620:CDS | 65.0% | |
| TCCGTGCAGCGATCCGTTGG+AGG | - | chr3_1:75401506-75401525 | Msa0375620:CDS | 65.0% | |
| GCCGCTCGCCTCGCTGAATC+CGG | - | chr3_1:75401209-75401228 | Msa0375620:CDS | 70.0% | |
| GCCGCTCGCCTCGCTGAATC+CGG | - | chr3_1:75401209-75401228 | Msa0375620:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 75400480 | 75402177 | 75400480 | ID=Msa0375620;Name=Msa0375620 |
| chr3_1 | mRNA | 75400480 | 75402177 | 75400480 | ID=Msa0375620-mRNA-1;Parent=Msa0375620;Name=Msa0375620-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|565 |
| chr3_1 | exon | 75400480 | 75402177 | 75400480 | ID=Msa0375620-mRNA-1:exon:17694;Parent=Msa0375620-mRNA-1 |
| chr3_1 | CDS | 75400480 | 75402177 | 75400480 | ID=Msa0375620-mRNA-1:cds;Parent=Msa0375620-mRNA-1 |
| Gene Sequence |
| Protein sequence |
