AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0314240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0314240 MtrunA17_Chr2g0284321 95.495 222 2 2 1 220 1 216 1.67e-155 429
Msa0314240 MtrunA17_Chr8g0379461 53.769 199 63 7 11 197 46 227 2.65e-62 194
Msa0314240 MtrunA17_Chr2g0319961 51.980 202 80 6 7 194 47 245 1.24e-59 188
Msa0314240 MtrunA17_Chr7g0248691 60.440 91 30 1 9 99 134 218 2.50e-33 122
Msa0314240 MtrunA17_Chr8g0348311 50.000 126 49 3 4 121 129 248 8.81e-33 120
Msa0314240 MtrunA17_Chr2g0293481 50.769 130 48 3 11 124 239 368 1.32e-32 122
Msa0314240 MtrunA17_Chr7g0270051 52.252 111 48 3 9 116 24 132 5.61e-32 117
Msa0314240 MtrunA17_Chr8g0387501 76.562 64 15 0 36 99 130 193 1.50e-31 116
Msa0314240 MtrunA17_Chr5g0401821 54.945 91 40 1 4 94 169 258 1.35e-28 108
Msa0314240 MtrunA17_Chr1g0147881 54.762 84 37 1 11 94 239 321 8.99e-28 107
Msa0314240 MtrunA17_Chr1g0202461 72.308 65 18 0 35 99 261 325 2.23e-27 107
Msa0314240 MtrunA17_Chr4g0053281 55.172 87 37 2 9 94 240 325 2.26e-27 106
Msa0314240 MtrunA17_Chr4g0071521 56.471 85 36 1 9 93 220 303 2.86e-27 105
Msa0314240 MtrunA17_Chr1g0184691 55.294 85 37 1 12 96 271 354 2.98e-26 103
Msa0314240 MtrunA17_Chr7g0228941 64.407 59 21 0 34 92 51 109 3.97e-25 95.5
Msa0314240 MtrunA17_Chr3g0139021 51.163 86 41 1 11 96 291 375 4.22e-24 98.6
Msa0314240 MtrunA17_Chr2g0289181 59.677 62 25 0 34 95 13 74 3.83e-22 90.5
Msa0314240 MtrunA17_Chr3g0099641 58.065 62 26 0 35 96 251 312 2.70e-19 85.5
Msa0314240 MtrunA17_Chr7g0218081 42.017 119 50 4 11 116 375 487 6.10e-19 84.7
Msa0314240 MtrunA17_Chr7g0218081 43.182 88 47 3 31 118 224 308 1.38e-14 72.0
Msa0314240 MtrunA17_Chr7g0270831 56.452 62 27 0 35 96 216 277 7.20e-19 84.3
Msa0314240 MtrunA17_Chr4g0051881 56.667 60 25 1 36 95 179 237 8.06e-19 83.2
Msa0314240 MtrunA17_Chr5g0443131 55.000 60 26 1 36 95 158 216 1.00e-18 82.8
Msa0314240 MtrunA17_Chr2g0288871 56.452 62 27 0 35 96 305 366 1.13e-18 84.0
Msa0314240 MtrunA17_Chr2g0302391 55.738 61 27 0 36 96 212 272 1.36e-18 83.6
Msa0314240 MtrunA17_Chr7g0263531 53.846 78 30 3 36 113 362 433 4.28e-18 82.0
Msa0314240 MtrunA17_Chr7g0263531 49.206 63 30 2 33 95 187 247 2.08e-14 71.2
Msa0314240 MtrunA17_Chr3g0079691 38.596 114 65 4 32 142 277 388 4.67e-18 82.4
Msa0314240 MtrunA17_Chr3g0079691 41.053 95 46 3 36 121 496 589 1.02e-14 72.4
Msa0314240 MtrunA17_Chr2g0322391 54.839 62 28 0 35 96 349 410 5.76e-18 82.0
Msa0314240 MtrunA17_Chr5g0418191 47.500 80 40 2 36 114 321 399 7.74e-18 81.3
Msa0314240 MtrunA17_Chr5g0418191 32.520 123 80 3 33 155 149 268 1.86e-15 74.3
Msa0314240 MtrunA17_Chr5g0418781 54.688 64 27 2 36 98 125 187 7.86e-18 79.7
Msa0314240 MtrunA17_Chr4g0042831 47.561 82 40 2 36 115 279 359 8.33e-18 80.9
Msa0314240 MtrunA17_Chr4g0042831 35.246 122 68 3 7 126 125 237 1.05e-12 66.2
Msa0314240 MtrunA17_Chr4g0060271 52.459 61 29 0 35 95 255 315 6.81e-17 79.0
Msa0314240 MtrunA17_Chr4g0075201 51.613 62 30 0 35 96 267 328 7.11e-17 78.6
Msa0314240 MtrunA17_Chr4g0025051 52.459 61 29 0 35 95 335 395 7.62e-17 78.6
Msa0314240 MtrunA17_Chr4g0025061 50.000 64 32 0 32 95 357 420 9.95e-17 78.2
Msa0314240 MtrunA17_Chr5g0445311 50.794 63 30 1 36 98 365 426 1.15e-16 78.2
Msa0314240 MtrunA17_Chr5g0445311 32.168 143 94 3 36 178 201 340 2.24e-14 71.6
Msa0314240 MtrunA17_Chr1g0194481 48.333 60 30 1 36 95 159 217 1.85e-16 76.6
Msa0314240 MtrunA17_Chr3g0101131 50.000 64 31 1 36 99 416 478 2.01e-16 77.4
Msa0314240 MtrunA17_Chr3g0101131 34.579 107 66 4 36 142 244 346 8.75e-11 60.8
Msa0314240 MtrunA17_Chr4g0051181 52.459 61 29 0 35 95 243 303 3.13e-16 76.6
Msa0314240 MtrunA17_Chr1g0150281 49.123 57 29 0 36 92 141 197 3.16e-16 75.5
Msa0314240 MtrunA17_Chr3g0106491 43.158 95 51 2 14 106 342 435 5.52e-16 76.3
Msa0314240 MtrunA17_Chr3g0106491 40.909 110 59 5 36 143 199 304 2.15e-13 68.6
Msa0314240 MtrunA17_Chr5g0432161 52.381 63 29 1 36 98 422 483 6.01e-16 76.3
Msa0314240 MtrunA17_Chr5g0432161 48.333 60 29 2 36 95 245 302 1.60e-11 63.2
Msa0314240 MtrunA17_Chr7g0270191 51.667 60 28 1 36 95 146 204 8.64e-16 74.3
Msa0314240 MtrunA17_Chr7g0249301 55.000 60 25 2 36 95 63 120 9.28e-16 75.1
Msa0314240 MtrunA17_Chr7g0249301 50.794 63 30 1 36 98 293 354 7.63e-15 72.4
Msa0314240 MtrunA17_Chr4g0068541 48.333 60 30 1 36 95 209 267 1.39e-15 74.7
Msa0314240 MtrunA17_Chr7g0238921 40.000 105 56 3 36 134 125 228 1.42e-15 73.9
Msa0314240 MtrunA17_Chr7g0216891 53.448 58 27 0 35 92 219 276 1.51e-15 74.7
Msa0314240 MtrunA17_Chr1g0150271 46.667 60 32 0 36 95 102 161 2.79e-15 72.4
Msa0314240 MtrunA17_Chr3g0136961 43.056 72 41 0 36 107 139 210 3.00e-15 72.8
Msa0314240 MtrunA17_Chr7g0249311 48.052 77 34 2 36 112 393 463 3.40e-15 73.9
Msa0314240 MtrunA17_Chr7g0249311 48.611 72 34 3 24 95 169 237 9.55e-15 72.8
Msa0314240 MtrunA17_Chr6g0485431 51.613 62 28 2 35 95 154 214 3.83e-15 73.2
Msa0314240 MtrunA17_Chr4g0001361 42.857 70 40 0 27 96 154 223 4.57e-15 72.8
Msa0314240 MtrunA17_Chr7g0275531 46.479 71 32 2 36 100 119 189 1.59e-14 71.2
Msa0314240 MtrunA17_Chr4g0074001 47.619 63 32 1 36 98 360 421 3.05e-14 70.9
Msa0314240 MtrunA17_Chr2g0294231 46.667 60 31 1 36 95 204 262 3.33e-14 70.5
Msa0314240 MtrunA17_Chr2g0333851 45.000 60 33 0 36 95 170 229 4.01e-14 70.1
Msa0314240 MtrunA17_Chr8g0347251 30.827 133 83 3 9 134 110 240 5.12e-14 70.1
Msa0314240 MtrunA17_Chr3g0126391 50.000 60 28 1 33 90 131 190 5.42e-14 69.7
Msa0314240 MtrunA17_Chr3g0129321 48.333 60 30 1 36 95 119 177 6.27e-14 67.8
Msa0314240 MtrunA17_Chr8g0387981 31.724 145 86 4 9 146 106 244 8.20e-14 69.3
Msa0314240 MtrunA17_Chr4g0004911 49.206 63 31 1 36 98 337 398 9.68e-14 69.7
Msa0314240 MtrunA17_Chr5g0447701 50.000 60 29 1 36 95 253 311 1.10e-13 69.3
Msa0314240 MtrunA17_Chr5g0447701 48.333 60 29 2 36 95 93 150 5.81e-11 61.2
Msa0314240 MtrunA17_Chr1g0189391 55.932 59 24 2 36 93 98 155 1.15e-13 68.9
Msa0314240 MtrunA17_Chr1g0188941 38.298 94 48 2 4 97 29 112 1.23e-13 65.1
Msa0314240 MtrunA17_Chr1g0150801 49.123 57 28 1 36 92 103 158 2.46e-13 65.5
Msa0314240 MtrunA17_Chr5g0428351 35.433 127 69 5 36 152 184 307 3.24e-13 67.4
Msa0314240 MtrunA17_Chr7g0243891 47.619 63 32 1 36 98 375 436 3.68e-13 67.8
Msa0314240 MtrunA17_Chr7g0243891 45.588 68 33 3 36 103 217 280 5.83e-12 64.3
Msa0314240 MtrunA17_Chr4g0024391 45.312 64 35 0 32 95 226 289 5.98e-13 67.4
Msa0314240 MtrunA17_Chr8g0383351 46.552 58 30 1 36 93 161 217 1.19e-12 65.1
Msa0314240 MtrunA17_Chr3g0129361 46.552 58 30 1 36 93 145 201 1.57e-12 64.3
Msa0314240 MtrunA17_Chr8g0335811 48.276 58 29 1 36 93 155 211 1.83e-12 64.3
Msa0314240 MtrunA17_Chr8g0383251 45.000 60 32 1 36 95 109 167 2.05e-12 63.5
Msa0314240 MtrunA17_Chr7g0224801 44.068 59 32 1 36 94 94 151 5.11e-12 62.0
Msa0314240 MtrunA17_Chr7g0248721 47.368 57 28 2 36 92 142 196 2.83e-11 60.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0314240 AT1G29280.1 48.214 224 94 7 4 208 38 258 2.59e-57 182
Msa0314240 AT3G58710.2 45.714 210 89 6 11 197 41 248 6.83e-49 161
Msa0314240 AT3G58710.1 45.455 209 89 6 12 197 43 249 2.59e-48 160
Msa0314240 AT2G34830.2 36.709 237 101 5 6 203 185 411 4.43e-33 124
Msa0314240 AT2G34830.1 36.709 237 101 5 6 203 176 402 4.78e-33 123
Msa0314240 AT4G01250.1 44.000 150 69 3 7 155 105 240 3.24e-32 119
Msa0314240 AT1G30650.1 61.290 93 32 1 11 99 189 281 3.35e-31 118
Msa0314240 AT4G23550.1 49.612 129 54 4 16 143 126 244 1.60e-30 114
Msa0314240 AT5G52830.1 49.153 118 50 3 9 125 144 252 6.25e-30 114
Msa0314240 AT2G23320.1 53.488 86 39 1 9 94 215 299 4.41e-29 111
Msa0314240 AT4G24240.1 56.977 86 36 1 9 94 256 340 8.12e-28 108
Msa0314240 AT5G45050.2 55.914 93 36 1 7 99 1129 1216 1.16e-26 107
Msa0314240 AT2G30590.1 56.098 82 35 1 11 92 290 370 1.17e-26 105
Msa0314240 AT5G45050.1 55.914 93 36 1 7 99 1157 1244 1.31e-26 107
Msa0314240 AT5G45050.4 55.914 93 36 1 7 99 1018 1105 1.51e-26 107
Msa0314240 AT4G31550.2 54.878 82 36 1 11 92 222 302 2.50e-26 103
Msa0314240 AT4G31550.1 54.321 81 36 1 12 92 224 303 1.11e-25 102
Msa0314240 AT3G04670.1 51.648 91 43 1 3 93 231 320 2.25e-25 101
Msa0314240 AT2G24570.1 54.321 81 36 1 12 92 221 300 4.27e-25 100
Msa0314240 AT5G28650.1 50.549 91 44 1 3 93 231 320 6.18e-25 100
Msa0314240 AT5G46350.1 51.220 82 39 1 36 117 184 264 1.81e-21 90.9
Msa0314240 AT2G04880.1 44.828 87 45 2 36 120 308 393 1.77e-19 86.7
Msa0314240 AT2G04880.2 44.828 87 45 2 36 120 284 369 1.87e-19 86.3
Msa0314240 AT4G04450.2 56.452 62 27 0 35 96 198 259 5.31e-19 85.1
Msa0314240 AT4G18170.1 56.667 60 25 1 36 95 173 231 5.45e-19 84.0
Msa0314240 AT4G04450.1 56.452 62 27 0 35 96 292 353 7.57e-19 84.7
Msa0314240 AT1G62300.1 54.839 62 28 0 35 96 312 373 1.30e-18 84.3
Msa0314240 AT4G22070.4 54.839 62 28 0 35 96 297 358 2.05e-18 83.6
Msa0314240 AT4G22070.3 54.839 62 28 0 35 96 297 358 2.05e-18 83.6
Msa0314240 AT4G22070.2 54.839 62 28 0 35 96 297 358 2.05e-18 83.6
Msa0314240 AT4G22070.1 54.839 62 28 0 35 96 297 358 2.05e-18 83.6
Msa0314240 AT1G29860.1 53.333 60 27 1 36 95 137 195 2.49e-18 81.6
Msa0314240 AT5G45260.1 45.455 99 43 4 17 113 1197 1286 2.63e-18 83.6
Msa0314240 AT4G01720.1 53.846 65 30 0 32 96 236 300 1.77e-17 80.9
Msa0314240 AT2G40740.1 42.424 99 49 2 1 91 133 231 2.14e-17 79.3
Msa0314240 AT2G40740.3 42.857 98 48 2 1 90 142 239 2.56e-17 79.3
Msa0314240 AT2G03340.1 42.574 101 43 3 11 98 379 477 6.08e-17 79.3
Msa0314240 AT2G03340.1 41.379 87 44 3 28 114 243 322 3.72e-14 71.2
Msa0314240 AT1G68150.1 53.333 60 28 0 36 95 236 295 1.47e-16 77.8
Msa0314240 AT4G31800.2 41.250 80 46 1 16 95 93 171 3.15e-16 75.5
Msa0314240 AT1G18860.1 52.459 61 29 0 35 95 239 299 3.43e-16 77.0
Msa0314240 AT4G31800.1 45.455 66 36 0 30 95 171 236 4.88e-16 75.9
Msa0314240 AT5G15130.1 50.820 61 30 0 35 95 227 287 5.00e-16 76.6
Msa0314240 AT5G15130.2 50.820 61 30 0 35 95 185 245 5.51e-16 76.6
Msa0314240 AT5G07100.2 49.206 63 31 1 36 98 142 203 8.45e-16 73.6
Msa0314240 AT5G07100.2 30.252 119 74 3 27 139 16 131 8.61e-11 60.1
Msa0314240 AT5G07100.4 49.206 63 31 1 36 98 142 203 8.45e-16 73.6
Msa0314240 AT5G07100.4 30.252 119 74 3 27 139 16 131 8.61e-11 60.1
Msa0314240 AT5G07100.5 49.206 63 31 1 36 98 142 203 8.45e-16 73.6
Msa0314240 AT5G07100.5 30.252 119 74 3 27 139 16 131 8.61e-11 60.1
Msa0314240 AT5G07100.3 49.206 63 31 1 36 98 142 203 8.45e-16 73.6
Msa0314240 AT5G07100.3 30.252 119 74 3 27 139 16 131 8.61e-11 60.1
Msa0314240 AT4G26440.1 43.902 82 43 3 33 114 176 254 8.71e-16 75.9
Msa0314240 AT4G26440.1 48.438 64 32 1 36 99 373 435 4.37e-14 70.9
Msa0314240 AT5G26170.1 50.000 58 28 1 36 93 114 170 9.20e-16 72.8
Msa0314240 AT1G13960.1 51.667 60 28 1 36 95 410 468 9.63e-16 75.9
Msa0314240 AT1G13960.1 38.384 99 58 3 10 108 204 299 1.51e-14 72.4
Msa0314240 AT1G13960.2 51.667 60 28 1 36 95 257 315 1.07e-15 75.1
Msa0314240 AT1G13960.2 44.872 78 40 3 31 108 72 146 1.90e-14 71.6
Msa0314240 AT2G25000.2 45.455 66 36 0 30 95 98 163 1.56e-15 73.2
Msa0314240 AT2G25000.4 45.455 66 36 0 30 95 98 163 1.56e-15 73.2
Msa0314240 AT4G30935.1 47.619 63 32 1 36 98 332 393 1.72e-15 75.1
Msa0314240 AT2G37260.2 43.678 87 48 1 8 94 240 325 2.12e-15 74.3
Msa0314240 AT2G37260.2 48.333 60 29 2 36 95 84 141 1.40e-11 63.2
Msa0314240 AT2G37260.3 43.678 87 48 1 8 94 242 327 2.19e-15 74.3
Msa0314240 AT2G37260.3 48.333 60 29 2 36 95 86 143 1.45e-11 63.2
Msa0314240 AT4G23810.1 32.847 137 86 2 6 140 129 261 2.34e-15 73.9
Msa0314240 AT2G47260.1 48.333 60 30 1 36 95 175 233 2.47e-15 73.9
Msa0314240 AT2G37260.1 43.678 87 48 1 8 94 322 407 2.75e-15 74.3
Msa0314240 AT2G37260.1 48.333 60 29 2 36 95 166 223 1.28e-11 63.5
Msa0314240 AT5G49520.1 50.000 60 29 1 36 95 222 280 2.79e-15 74.3
Msa0314240 AT5G07100.1 49.206 63 31 1 36 98 235 296 2.91e-15 73.6
Msa0314240 AT2G38470.1 50.794 63 30 1 36 98 363 424 3.03e-15 74.3
Msa0314240 AT2G38470.1 46.667 60 30 2 36 95 185 242 2.09e-11 63.2
Msa0314240 AT3G01080.2 51.667 60 28 1 36 95 345 403 3.15e-15 74.3
Msa0314240 AT3G01080.2 47.059 68 34 2 31 98 201 266 1.39e-13 69.3
Msa0314240 AT4G11070.2 40.426 94 52 2 8 97 82 175 3.36e-15 73.2
Msa0314240 AT4G11070.1 40.426 94 52 2 8 97 114 207 3.56e-15 73.2
Msa0314240 AT2G25000.3 45.455 66 36 0 30 95 120 185 3.65e-15 72.4
Msa0314240 AT3G01080.1 51.667 60 28 1 36 95 307 365 3.97e-15 73.9
Msa0314240 AT3G01080.1 47.059 68 34 2 31 98 163 228 1.46e-13 69.3
Msa0314240 AT2G25000.1 45.455 66 36 0 30 95 141 206 4.18e-15 72.8
Msa0314240 AT4G26640.5 50.000 60 29 1 36 95 206 264 4.19e-15 73.6
Msa0314240 AT4G26640.5 45.161 62 32 2 36 97 36 95 5.40e-11 61.6
Msa0314240 AT4G26640.6 50.000 60 29 1 36 95 206 264 4.19e-15 73.6
Msa0314240 AT4G26640.6 45.161 62 32 2 36 97 36 95 5.40e-11 61.6
Msa0314240 AT4G26640.4 50.000 60 29 1 36 95 206 264 4.19e-15 73.6
Msa0314240 AT4G26640.4 45.161 62 32 2 36 97 36 95 5.40e-11 61.6
Msa0314240 AT4G26640.3 50.000 60 29 1 36 95 206 264 4.19e-15 73.6
Msa0314240 AT4G26640.3 45.161 62 32 2 36 97 36 95 5.40e-11 61.6
Msa0314240 AT4G26640.2 50.000 60 29 1 36 95 382 440 4.26e-15 73.9
Msa0314240 AT4G26640.2 45.161 62 32 2 36 97 212 271 5.90e-11 62.0
Msa0314240 AT4G26640.1 50.000 60 29 1 36 95 310 368 4.36e-15 73.9
Msa0314240 AT4G26640.1 45.161 62 32 2 36 97 140 199 6.10e-11 61.6
Msa0314240 AT4G26640.7 50.000 60 29 1 36 95 342 400 4.67e-15 73.9
Msa0314240 AT4G26640.7 45.161 62 32 2 36 97 172 231 6.81e-11 61.6
Msa0314240 AT2G21900.1 41.860 86 43 2 16 95 84 168 5.06e-15 71.2
Msa0314240 AT3G62340.1 45.455 77 38 2 36 109 119 194 5.30e-15 72.4
Msa0314240 AT1G80840.1 34.615 104 67 1 15 117 125 228 6.23e-15 72.4
Msa0314240 AT1G69310.4 49.153 59 29 1 36 94 148 205 6.89e-15 72.4
Msa0314240 AT1G69310.2 49.153 59 29 1 36 94 148 205 6.89e-15 72.4
Msa0314240 AT1G69310.1 49.153 59 29 1 36 94 148 205 6.89e-15 72.4
Msa0314240 AT1G69810.1 50.000 62 30 1 35 95 203 264 7.01e-15 73.2
Msa0314240 AT1G69810.2 50.000 62 30 1 35 95 145 206 1.06e-14 72.0
Msa0314240 AT5G56270.1 49.206 63 31 1 36 98 488 549 4.29e-14 71.2
Msa0314240 AT5G56270.1 47.692 65 32 2 33 97 271 333 1.74e-13 69.3
Msa0314240 AT3G01970.1 46.774 62 32 1 36 97 66 126 1.28e-13 66.2
Msa0314240 AT3G01080.3 47.692 65 32 2 31 95 201 263 1.31e-13 68.9
Msa0314240 AT1G64000.1 49.123 57 28 1 36 92 115 170 2.54e-13 66.6
Msa0314240 AT1G55600.1 36.782 87 50 2 10 96 286 367 5.85e-13 67.8
Msa0314240 AT2G30250.1 48.333 60 30 1 36 95 329 387 6.18e-13 67.4
Msa0314240 AT5G41570.1 49.123 57 28 1 36 92 99 154 9.48e-13 64.7
Msa0314240 AT1G66560.1 52.542 59 26 1 34 90 102 160 1.01e-12 65.9
Msa0314240 AT2G46130.1 47.368 57 29 1 36 92 31 86 1.65e-12 62.4
Msa0314240 AT2G46400.1 40.000 80 45 2 28 104 97 176 1.74e-12 65.5
Msa0314240 AT2G44745.1 49.123 57 28 1 36 92 146 201 2.36e-12 64.3
Msa0314240 AT5G13080.1 44.068 59 32 1 36 94 68 125 2.51e-12 62.8
Msa0314240 AT1G80590.1 39.130 92 50 2 5 90 51 142 2.73e-12 64.3
Msa0314240 AT5G43290.1 38.542 96 48 2 1 96 90 174 5.57e-12 63.9
Msa0314240 AT3G56400.1 35.802 81 48 2 12 90 99 177 5.68e-12 63.9
Msa0314240 AT5G01900.1 40.244 82 46 2 12 90 86 167 1.23e-11 62.8
Msa0314240 AT5G24110.1 43.750 64 34 1 29 90 107 170 1.35e-11 63.2
Msa0314240 AT4G39410.1 46.552 58 30 1 36 93 224 280 2.27e-11 62.4
Msa0314240 AT1G66550.2 32.374 139 84 5 5 136 70 205 2.66e-11 61.6
Msa0314240 AT1G66550.1 37.383 107 60 4 34 136 107 210 8.35e-11 60.5

Find 97 sgRNAs with CRISPR-Local

Find 274 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCATTATCATTTGTTTATT+AGG 0.129965 2_4:-9946048 None:intergenic
TCATTATCATTTGTTTATTA+GGG 0.180992 2_4:-9946047 None:intergenic
GACCCTTAATCACTCTTAAA+AGG 0.221949 2_4:-9946234 None:intergenic
GGAGCTTTGTGGAGACTTAT+TGG 0.236522 2_4:-9946089 None:intergenic
CACTCTCTTCTTCTGCTAAA+AGG 0.248402 2_4:+9946362 Msa0314240:CDS
CATGAAATTAAGAACTTAAT+AGG 0.259309 2_4:-9947729 None:intergenic
ACCTCTTTCTATGCTTAATT+AGG 0.267112 2_4:+9946180 Msa0314240:five_prime_UTR
TCGGGTTCTTGTTCTTGTTC+TGG 0.268469 2_4:-9947227 None:intergenic
TCTTGTTCTTGTTCTGGTTC+AGG 0.273307 2_4:-9947221 None:intergenic
CTGGTGTTGCGGTAGTTTCT+TGG 0.299051 2_4:-9947161 None:intergenic
CGGAGTGTTCGACGGTGTTT+TGG 0.329073 2_4:+9947435 Msa0314240:CDS
CGGGTTTGTTGGGTTTAGTT+TGG 0.344993 2_4:+9947565 Msa0314240:three_prime_UTR
TGGATAAGGGGAACCTTTGA+TGG 0.364500 2_4:-9946705 None:intergenic
GTTTGATGCGGTGTTGTTGC+TGG 0.368100 2_4:-9947180 None:intergenic
TTGAAGAAGATTATAAAGAT+TGG 0.368130 2_4:-9946131 None:intergenic
GTCCCTTCCACATTCTTCAT+TGG 0.371466 2_4:-9946632 None:intergenic
TGCCGATCTCGGAGAGTTGC+CGG 0.372131 2_4:+9947415 Msa0314240:CDS
TGATGATCTTTCCATGTTAG+AGG 0.376413 2_4:-9946341 None:intergenic
TCATGGGCTTGGAGAAAGTA+TGG 0.382534 2_4:+9946674 Msa0314240:CDS
GAGAATGAATACCTTGGATA+AGG 0.400647 2_4:-9946719 None:intergenic
CACCGTCTGATTCATGGGCT+TGG 0.402885 2_4:+9946663 Msa0314240:CDS
CACTCCACCGTCTGATTCAT+GGG 0.406966 2_4:+9946658 Msa0314240:CDS
ACACTCCACCGTCTGATTCA+TGG 0.409389 2_4:+9946657 Msa0314240:CDS
CATAAGATGCGGTACTCAAC+GGG 0.411200 2_4:+9946018 None:intergenic
AGAATGAATACCTTGGATAA+GGG 0.413010 2_4:-9946718 None:intergenic
TAGGCGAGGTATAAAGAAAA+GGG 0.417404 2_4:+9946598 Msa0314240:intron
ATGTCGTTGTTTGCCGATCT+CGG 0.427384 2_4:+9947404 Msa0314240:CDS
AGTGTCTATGTTGGGAGAAG+AGG 0.434526 2_4:+9947379 Msa0314240:CDS
GATGAGTTAGGCGGATGGTT+TGG 0.439520 2_4:+9947296 Msa0314240:CDS
CTCTAAAACTAGGAGCTTTG+TGG 0.442692 2_4:-9946100 None:intergenic
ATAGGCGAGGTATAAAGAAA+AGG 0.449369 2_4:+9946597 Msa0314240:intron
AGGAGGAGTGGTGCCGGCGC+CGG 0.456828 2_4:+9947464 Msa0314240:CDS
AGGCGGATGGTTTGGAGATG+TGG 0.458894 2_4:+9947304 Msa0314240:CDS
TTTCATGCTTGATTCATAGC+TGG 0.481465 2_4:+9947745 Msa0314240:three_prime_UTR
TTGCGGTAGTTTCTTGGTGG+TGG 0.484307 2_4:-9947155 None:intergenic
GATATTCGTAAACGTTTCAT+CGG 0.485537 2_4:-9947246 None:intergenic
GAGAAGGAAGTGTCTATGTT+GGG 0.500215 2_4:+9947371 Msa0314240:CDS
ATATTCGTAAACGTTTCATC+GGG 0.505400 2_4:-9947245 None:intergenic
TGGCACGGCGTGGTTGTGAT+CGG 0.521456 2_4:-9947135 None:intergenic
TTCTGAGTCTTTGTTTGATG+CGG 0.524236 2_4:-9947192 None:intergenic
ATCGGACACTCCAACACTGC+CGG 0.524605 2_4:-9947341 None:intergenic
TGATTCAATTCCCTCTAACA+TGG 0.528817 2_4:+9946330 Msa0314240:exon
GATCGGATCGCCGGCAGTGT+TGG 0.529018 2_4:+9947331 Msa0314240:CDS
ATTGCCACCGGTGATGAGTT+AGG 0.530483 2_4:+9947284 Msa0314240:CDS
AACAAGTGGATATATGCAGT+TGG 0.530968 2_4:+9947609 Msa0314240:three_prime_UTR
AGGAGTGGTGCCGGCGCCGG+TGG 0.532501 2_4:+9947467 Msa0314240:CDS
GTAGTTTCTTGGTGGTGGCA+CGG 0.532781 2_4:-9947150 None:intergenic
GGAGAAGGAAGTGTCTATGT+TGG 0.533402 2_4:+9947370 Msa0314240:CDS
ACAAGTGGATATATGCAGTT+GGG 0.536520 2_4:+9947610 Msa0314240:three_prime_UTR
AGAGGTAGGAGGAGTGGTGC+CGG 0.538061 2_4:+9947458 Msa0314240:CDS
GTGATATGATATTTATAAAG+TGG 0.545047 2_4:-9946206 None:intergenic
GGATAAGGGGAACCTTTGAT+GGG 0.548989 2_4:-9946704 None:intergenic
GTGTTGCGGTAGTTTCTTGG+TGG 0.552712 2_4:-9947158 None:intergenic
CCATAAGATGCGGTACTCAA+CGG 0.558079 2_4:+9946017 None:intergenic
GATGATCTTTCCATGTTAGA+GGG 0.558105 2_4:-9946340 None:intergenic
ATTCCAATGAAGAATGTGGA+AGG 0.559865 2_4:+9946629 Msa0314240:CDS
TGTGGAGGCGATCGGATCGC+CGG 0.565940 2_4:+9947322 Msa0314240:CDS
CATTATCATTTGTTTATTAG+GGG 0.567478 2_4:-9946046 None:intergenic
GGAGAGTGCCCTCTAAAACT+AGG 0.567912 2_4:-9946110 None:intergenic
GAATGAATACCTTGGATAAG+GGG 0.571511 2_4:-9946717 None:intergenic
CGGTGTTGTTGCTGGTGTTG+CGG 0.572453 2_4:-9947172 None:intergenic
TAATCACTCTTAAAAGGTGT+CGG 0.573234 2_4:-9946228 None:intergenic
CGCCGGTGGTGATGTTAGTG+TGG 0.574656 2_4:+9947481 Msa0314240:CDS
CTCCGGCAACTCTCCGAGAT+CGG 0.577094 2_4:-9947417 None:intergenic
CAAACTAAACCCAACAAACC+CGG 0.579370 2_4:-9947564 None:intergenic
TTTGGAGATGTGGAGGCGAT+CGG 0.579590 2_4:+9947314 Msa0314240:CDS
TCCCACACTAACATCACCAC+CGG 0.582238 2_4:-9947483 None:intergenic
GCTTTGTGGAGACTTATTGG+TGG 0.582983 2_4:-9946086 None:intergenic
AGAAATTCCAATGAAGAATG+TGG 0.583073 2_4:+9946625 Msa0314240:CDS
GATCGGAGGTGTATGTTACA+AGG 0.587899 2_4:-9947118 None:intergenic
TATGTTACAAGGAGAACGGT+GGG 0.590777 2_4:-9947107 None:intergenic
ACCTAATTAAGCATAGAAAG+AGG 0.591509 2_4:-9946181 None:intergenic
GAAAATTCAATGATTGCCAC+CGG 0.593733 2_4:+9947272 Msa0314240:CDS
ACTAACATCACCACCGGCGC+CGG 0.599715 2_4:-9947477 None:intergenic
CTCCAAGCCCATGAATCAGA+CGG 0.600001 2_4:-9946665 None:intergenic
GCCGGTGGTGATGTTAGTGT+GGG 0.605737 2_4:+9947482 Msa0314240:CDS
AGAGTTGCCGGAGTGTTCGA+CGG 0.606059 2_4:+9947427 Msa0314240:CDS
TTCCAATGAAGAATGTGGAA+GGG 0.616216 2_4:+9946630 Msa0314240:CDS
CAAAACACCGTCGAACACTC+CGG 0.616354 2_4:-9947434 None:intergenic
CACGGCGTGGTTGTGATCGG+AGG 0.619714 2_4:-9947132 None:intergenic
TCAAAGGTTCCCCTTATCCA+AGG 0.623779 2_4:+9946708 Msa0314240:CDS
CGGATGGTTTGGAGATGTGG+AGG 0.626281 2_4:+9947307 Msa0314240:CDS
GAGCAATTAGCTTCAACTAG+TGG 0.632709 2_4:-9947506 None:intergenic
ACTTCCTTCTCCGAAAACAT+CGG 0.637465 2_4:-9947359 None:intergenic
CCGGTGATGAGTTAGGCGGA+TGG 0.641308 2_4:+9947291 Msa0314240:CDS
GGTGTATGTTACAAGGAGAA+CGG 0.648738 2_4:-9947111 None:intergenic
CTATAGCTCGAAATTGACAG+TGG 0.649288 2_4:+9946265 Msa0314240:five_prime_UTR
TTCTTGGTGGTGGCACGGCG+TGG 0.655603 2_4:-9947145 None:intergenic
CCATCCGCCTAACTCATCAC+CGG 0.656119 2_4:-9947291 None:intergenic
GGAGAACGGTGGGGTCCATG+TGG 0.658885 2_4:-9947097 None:intergenic
TGATAATAATTACAAGCACG+TGG 0.659338 2_4:-9947644 None:intergenic
ACAAGTAGAAAGAAACCACA+TGG 0.663213 2_4:+9947082 Msa0314240:CDS
TCCGCCTAACTCATCACCGG+TGG 0.676396 2_4:-9947288 None:intergenic
GTATGTTACAAGGAGAACGG+TGG 0.715629 2_4:-9947108 None:intergenic
GCCACCGGTGATGAGTTAGG+CGG 0.726711 2_4:+9947287 Msa0314240:CDS
CAAGCCCATGAATCAGACGG+TGG 0.730326 2_4:-9946662 None:intergenic
ATGTTACAAGGAGAACGGTG+GGG 0.778163 2_4:-9947106 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATGTAAATATGTATAAT+AGG + chr2_4:9946579-9946598 Msa0314240:intron 10.0%
!!! TTTTATTTTTTTAATTTTCC+GGG + chr2_4:9947546-9947565 Msa0314240:three_prime_UTR 10.0%
!! AAAATGTAAATATGTATAAT+AGG + chr2_4:9946579-9946598 Msa0314240:intron 10.0%
!!! TTTTATTTTTTTAATTTTCC+GGG + chr2_4:9947546-9947565 Msa0314240:three_prime_UTR 10.0%
!! TCATTATCATTTGTTTATTA+GGG - chr2_4:9946050-9946069 None:intergenic 15.0%
!! ATCATTATCATTTGTTTATT+AGG - chr2_4:9946051-9946070 None:intergenic 15.0%
!! TCAAACTATATTAATATTGA+TGG - chr2_4:9946401-9946420 None:intergenic 15.0%
!! TCATTATCATTTGTTTATTA+GGG - chr2_4:9946050-9946069 None:intergenic 15.0%
!! ATCATTATCATTTGTTTATT+AGG - chr2_4:9946051-9946070 None:intergenic 15.0%
!! TCAAACTATATTAATATTGA+TGG - chr2_4:9946401-9946420 None:intergenic 15.0%
!! CATTATCATTTGTTTATTAG+GGG - chr2_4:9946049-9946068 None:intergenic 20.0%
!! TTGAAGAAGATTATAAAGAT+TGG - chr2_4:9946134-9946153 None:intergenic 20.0%
!! GTGATATGATATTTATAAAG+TGG - chr2_4:9946209-9946228 None:intergenic 20.0%
!! AATCTTATAAGAATTGCATA+CGG - chr2_4:9946990-9947009 None:intergenic 20.0%
!! TCTTATAAGATTTACTCATA+TGG + chr2_4:9946998-9947017 Msa0314240:intron 20.0%
!! CTTATAAGATTTACTCATAT+GGG + chr2_4:9946999-9947018 Msa0314240:intron 20.0%
!! TTATAAGATTTACTCATATG+GGG + chr2_4:9947000-9947019 Msa0314240:intron 20.0%
!!! TTTTTTTGACGATACTTAAT+AGG - chr2_4:9947692-9947711 None:intergenic 20.0%
!! CATGAAATTAAGAACTTAAT+AGG - chr2_4:9947732-9947751 None:intergenic 20.0%
!! CAAAAAAAAAAGGATAACTA+TGG - chr2_4:9947775-9947794 None:intergenic 20.0%
!! ATGTTATCTGCAAAAAAAAA+AGG - chr2_4:9947785-9947804 None:intergenic 20.0%
!! CATTATCATTTGTTTATTAG+GGG - chr2_4:9946049-9946068 None:intergenic 20.0%
!! TTGAAGAAGATTATAAAGAT+TGG - chr2_4:9946134-9946153 None:intergenic 20.0%
!! GTGATATGATATTTATAAAG+TGG - chr2_4:9946209-9946228 None:intergenic 20.0%
!! AATCTTATAAGAATTGCATA+CGG - chr2_4:9946990-9947009 None:intergenic 20.0%
!! TCTTATAAGATTTACTCATA+TGG + chr2_4:9946998-9947017 Msa0314240:intron 20.0%
!! CTTATAAGATTTACTCATAT+GGG + chr2_4:9946999-9947018 Msa0314240:intron 20.0%
!! TTATAAGATTTACTCATATG+GGG + chr2_4:9947000-9947019 Msa0314240:intron 20.0%
!!! TTTTTTTGACGATACTTAAT+AGG - chr2_4:9947692-9947711 None:intergenic 20.0%
!! CATGAAATTAAGAACTTAAT+AGG - chr2_4:9947732-9947751 None:intergenic 20.0%
!! CAAAAAAAAAAGGATAACTA+TGG - chr2_4:9947775-9947794 None:intergenic 20.0%
!! ATGTTATCTGCAAAAAAAAA+AGG - chr2_4:9947785-9947804 None:intergenic 20.0%
!! ACACTCAAATTTTGCTTAAA+AGG - chr2_4:9946479-9946498 None:intergenic 25.0%
!! TTTTTGTGACATGAATGTAA+GGG - chr2_4:9946748-9946767 None:intergenic 25.0%
!!! TTTTTTGTGACATGAATGTA+AGG - chr2_4:9946749-9946768 None:intergenic 25.0%
! AGGACAATGTTTCAATAATT+TGG - chr2_4:9946838-9946857 None:intergenic 25.0%
!!! TATTAGGGCTTTAAATTGAA+AGG - chr2_4:9946858-9946877 None:intergenic 25.0%
! CAAAAATGAAATACAACAAG+TGG + chr2_4:9947595-9947614 Msa0314240:three_prime_UTR 25.0%
!! ACACTCAAATTTTGCTTAAA+AGG - chr2_4:9946479-9946498 None:intergenic 25.0%
!! TTTTTGTGACATGAATGTAA+GGG - chr2_4:9946748-9946767 None:intergenic 25.0%
!!! TTTTTTGTGACATGAATGTA+AGG - chr2_4:9946749-9946768 None:intergenic 25.0%
! AGGACAATGTTTCAATAATT+TGG - chr2_4:9946838-9946857 None:intergenic 25.0%
!!! TATTAGGGCTTTAAATTGAA+AGG - chr2_4:9946858-9946877 None:intergenic 25.0%
! CAAAAATGAAATACAACAAG+TGG + chr2_4:9947595-9947614 Msa0314240:three_prime_UTR 25.0%
ACCTCTTTCTATGCTTAATT+AGG + chr2_4:9946180-9946199 Msa0314240:five_prime_UTR 30.0%
ACCTAATTAAGCATAGAAAG+AGG - chr2_4:9946184-9946203 None:intergenic 30.0%
! TAATCACTCTTAAAAGGTGT+CGG - chr2_4:9946231-9946250 None:intergenic 30.0%
!! ACACCTTTTAAGAGTGATTA+AGG + chr2_4:9946231-9946250 Msa0314240:five_prime_UTR 30.0%
!! CACCTTTTAAGAGTGATTAA+GGG + chr2_4:9946232-9946251 Msa0314240:five_prime_UTR 30.0%
GTAAATATGTATAATAGGCG+AGG + chr2_4:9946584-9946603 Msa0314240:intron 30.0%
AGAAATTCCAATGAAGAATG+TGG + chr2_4:9946625-9946644 Msa0314240:CDS 30.0%
AGAATGAATACCTTGGATAA+GGG - chr2_4:9946721-9946740 None:intergenic 30.0%
! TTTTGTGACATGAATGTAAG+GGG - chr2_4:9946747-9946766 None:intergenic 30.0%
! GGCTTTTATGCAAAATTCAA+AGG - chr2_4:9946817-9946836 None:intergenic 30.0%
CCTCGATCTCTAATATATTA+GGG - chr2_4:9946873-9946892 None:intergenic 30.0%
ACCTCGATCTCTAATATATT+AGG - chr2_4:9946874-9946893 None:intergenic 30.0%
! TTACTCATATGGGGAAATTT+TGG + chr2_4:9947009-9947028 Msa0314240:intron 30.0%
ATATTCGTAAACGTTTCATC+GGG - chr2_4:9947248-9947267 None:intergenic 30.0%
GATATTCGTAAACGTTTCAT+CGG - chr2_4:9947249-9947268 None:intergenic 30.0%
!!! TTTTAATTTTCCGGGTTTGT+TGG + chr2_4:9947554-9947573 Msa0314240:three_prime_UTR 30.0%
!! TTTAATTTTCCGGGTTTGTT+GGG + chr2_4:9947555-9947574 Msa0314240:three_prime_UTR 30.0%
TGATAATAATTACAAGCACG+TGG - chr2_4:9947647-9947666 None:intergenic 30.0%
ACCTCTTTCTATGCTTAATT+AGG + chr2_4:9946180-9946199 Msa0314240:five_prime_UTR 30.0%
ACCTAATTAAGCATAGAAAG+AGG - chr2_4:9946184-9946203 None:intergenic 30.0%
! TAATCACTCTTAAAAGGTGT+CGG - chr2_4:9946231-9946250 None:intergenic 30.0%
!! ACACCTTTTAAGAGTGATTA+AGG + chr2_4:9946231-9946250 Msa0314240:five_prime_UTR 30.0%
!! CACCTTTTAAGAGTGATTAA+GGG + chr2_4:9946232-9946251 Msa0314240:five_prime_UTR 30.0%
GTAAATATGTATAATAGGCG+AGG + chr2_4:9946584-9946603 Msa0314240:intron 30.0%
AGAAATTCCAATGAAGAATG+TGG + chr2_4:9946625-9946644 Msa0314240:CDS 30.0%
AGAATGAATACCTTGGATAA+GGG - chr2_4:9946721-9946740 None:intergenic 30.0%
! TTTTGTGACATGAATGTAAG+GGG - chr2_4:9946747-9946766 None:intergenic 30.0%
! GGCTTTTATGCAAAATTCAA+AGG - chr2_4:9946817-9946836 None:intergenic 30.0%
CCTCGATCTCTAATATATTA+GGG - chr2_4:9946873-9946892 None:intergenic 30.0%
ACCTCGATCTCTAATATATT+AGG - chr2_4:9946874-9946893 None:intergenic 30.0%
! TTACTCATATGGGGAAATTT+TGG + chr2_4:9947009-9947028 Msa0314240:intron 30.0%
ATATTCGTAAACGTTTCATC+GGG - chr2_4:9947248-9947267 None:intergenic 30.0%
GATATTCGTAAACGTTTCAT+CGG - chr2_4:9947249-9947268 None:intergenic 30.0%
!!! TTTTAATTTTCCGGGTTTGT+TGG + chr2_4:9947554-9947573 Msa0314240:three_prime_UTR 30.0%
!! TTTAATTTTCCGGGTTTGTT+GGG + chr2_4:9947555-9947574 Msa0314240:three_prime_UTR 30.0%
TGATAATAATTACAAGCACG+TGG - chr2_4:9947647-9947666 None:intergenic 30.0%
!!! ACAAAGCTCCTAGTTTTAGA+GGG + chr2_4:9946102-9946121 Msa0314240:five_prime_UTR 35.0%
GACCCTTAATCACTCTTAAA+AGG - chr2_4:9946237-9946256 None:intergenic 35.0%
TGATTCAATTCCCTCTAACA+TGG + chr2_4:9946330-9946349 Msa0314240:exon 35.0%
GATGATCTTTCCATGTTAGA+GGG - chr2_4:9946343-9946362 None:intergenic 35.0%
TGATGATCTTTCCATGTTAG+AGG - chr2_4:9946344-9946363 None:intergenic 35.0%
ATAGGCGAGGTATAAAGAAA+AGG + chr2_4:9946597-9946616 Msa0314240:intron 35.0%
TAGGCGAGGTATAAAGAAAA+GGG + chr2_4:9946598-9946617 Msa0314240:intron 35.0%
ATTCCAATGAAGAATGTGGA+AGG + chr2_4:9946629-9946648 Msa0314240:CDS 35.0%
TTCCAATGAAGAATGTGGAA+GGG + chr2_4:9946630-9946649 Msa0314240:CDS 35.0%
TATGGTCAAAAACCCATCAA+AGG + chr2_4:9946692-9946711 Msa0314240:CDS 35.0%
GAATGAATACCTTGGATAAG+GGG - chr2_4:9946720-9946739 None:intergenic 35.0%
GAGAATGAATACCTTGGATA+AGG - chr2_4:9946722-9946741 None:intergenic 35.0%
CCCTAATATATTAGAGATCG+AGG + chr2_4:9946870-9946889 Msa0314240:intron 35.0%
!! CTTTCTACTTGTTTTCTTGC+TGG - chr2_4:9947074-9947093 None:intergenic 35.0%
ACAAGTAGAAAGAAACCACA+TGG + chr2_4:9947082-9947101 Msa0314240:CDS 35.0%
! TTCTGAGTCTTTGTTTGATG+CGG - chr2_4:9947195-9947214 None:intergenic 35.0%
GAAAATTCAATGATTGCCAC+CGG + chr2_4:9947272-9947291 Msa0314240:CDS 35.0%
AACAAGTGGATATATGCAGT+TGG + chr2_4:9947609-9947628 Msa0314240:three_prime_UTR 35.0%
ACAAGTGGATATATGCAGTT+GGG + chr2_4:9947610-9947629 Msa0314240:three_prime_UTR 35.0%
TTTCATGCTTGATTCATAGC+TGG + chr2_4:9947745-9947764 Msa0314240:three_prime_UTR 35.0%
!!! ACAAAGCTCCTAGTTTTAGA+GGG + chr2_4:9946102-9946121 Msa0314240:five_prime_UTR 35.0%
GACCCTTAATCACTCTTAAA+AGG - chr2_4:9946237-9946256 None:intergenic 35.0%
TGATTCAATTCCCTCTAACA+TGG + chr2_4:9946330-9946349 Msa0314240:exon 35.0%
GATGATCTTTCCATGTTAGA+GGG - chr2_4:9946343-9946362 None:intergenic 35.0%
TGATGATCTTTCCATGTTAG+AGG - chr2_4:9946344-9946363 None:intergenic 35.0%
ATAGGCGAGGTATAAAGAAA+AGG + chr2_4:9946597-9946616 Msa0314240:intron 35.0%
TAGGCGAGGTATAAAGAAAA+GGG + chr2_4:9946598-9946617 Msa0314240:intron 35.0%
ATTCCAATGAAGAATGTGGA+AGG + chr2_4:9946629-9946648 Msa0314240:CDS 35.0%
TTCCAATGAAGAATGTGGAA+GGG + chr2_4:9946630-9946649 Msa0314240:CDS 35.0%
TATGGTCAAAAACCCATCAA+AGG + chr2_4:9946692-9946711 Msa0314240:CDS 35.0%
GAATGAATACCTTGGATAAG+GGG - chr2_4:9946720-9946739 None:intergenic 35.0%
GAGAATGAATACCTTGGATA+AGG - chr2_4:9946722-9946741 None:intergenic 35.0%
CCCTAATATATTAGAGATCG+AGG + chr2_4:9946870-9946889 Msa0314240:intron 35.0%
!! CTTTCTACTTGTTTTCTTGC+TGG - chr2_4:9947074-9947093 None:intergenic 35.0%
ACAAGTAGAAAGAAACCACA+TGG + chr2_4:9947082-9947101 Msa0314240:CDS 35.0%
! TTCTGAGTCTTTGTTTGATG+CGG - chr2_4:9947195-9947214 None:intergenic 35.0%
GAAAATTCAATGATTGCCAC+CGG + chr2_4:9947272-9947291 Msa0314240:CDS 35.0%
AACAAGTGGATATATGCAGT+TGG + chr2_4:9947609-9947628 Msa0314240:three_prime_UTR 35.0%
ACAAGTGGATATATGCAGTT+GGG + chr2_4:9947610-9947629 Msa0314240:three_prime_UTR 35.0%
TTTCATGCTTGATTCATAGC+TGG + chr2_4:9947745-9947764 Msa0314240:three_prime_UTR 35.0%
!! CTCTAAAACTAGGAGCTTTG+TGG - chr2_4:9946103-9946122 None:intergenic 40.0%
!!! CACAAAGCTCCTAGTTTTAG+AGG + chr2_4:9946101-9946120 Msa0314240:five_prime_UTR 40.0%
CTATAGCTCGAAATTGACAG+TGG + chr2_4:9946265-9946284 Msa0314240:five_prime_UTR 40.0%
CACTCTCTTCTTCTGCTAAA+AGG + chr2_4:9946362-9946381 Msa0314240:CDS 40.0%
GCGATGAAATATGTATGCTG+CGG + chr2_4:9946899-9946918 Msa0314240:intron 40.0%
!!! ATGGGGAAATTTTGGAACAG+AGG + chr2_4:9947017-9947036 Msa0314240:intron 40.0%
TATGTTACAAGGAGAACGGT+GGG - chr2_4:9947110-9947129 None:intergenic 40.0%
GGTGTATGTTACAAGGAGAA+CGG - chr2_4:9947114-9947133 None:intergenic 40.0%
!! TCTTGTTCTTGTTCTGGTTC+AGG - chr2_4:9947224-9947243 None:intergenic 40.0%
ACTTCCTTCTCCGAAAACAT+CGG - chr2_4:9947362-9947381 None:intergenic 40.0%
!! GAGAAGGAAGTGTCTATGTT+GGG + chr2_4:9947371-9947390 Msa0314240:CDS 40.0%
! GAGCAATTAGCTTCAACTAG+TGG - chr2_4:9947509-9947528 None:intergenic 40.0%
CAAACTAAACCCAACAAACC+CGG - chr2_4:9947567-9947586 None:intergenic 40.0%
!! CTCTAAAACTAGGAGCTTTG+TGG - chr2_4:9946103-9946122 None:intergenic 40.0%
!!! CACAAAGCTCCTAGTTTTAG+AGG + chr2_4:9946101-9946120 Msa0314240:five_prime_UTR 40.0%
CTATAGCTCGAAATTGACAG+TGG + chr2_4:9946265-9946284 Msa0314240:five_prime_UTR 40.0%
CACTCTCTTCTTCTGCTAAA+AGG + chr2_4:9946362-9946381 Msa0314240:CDS 40.0%
GCGATGAAATATGTATGCTG+CGG + chr2_4:9946899-9946918 Msa0314240:intron 40.0%
!!! ATGGGGAAATTTTGGAACAG+AGG + chr2_4:9947017-9947036 Msa0314240:intron 40.0%
TATGTTACAAGGAGAACGGT+GGG - chr2_4:9947110-9947129 None:intergenic 40.0%
GGTGTATGTTACAAGGAGAA+CGG - chr2_4:9947114-9947133 None:intergenic 40.0%
!! TCTTGTTCTTGTTCTGGTTC+AGG - chr2_4:9947224-9947243 None:intergenic 40.0%
ACTTCCTTCTCCGAAAACAT+CGG - chr2_4:9947362-9947381 None:intergenic 40.0%
!! GAGAAGGAAGTGTCTATGTT+GGG + chr2_4:9947371-9947390 Msa0314240:CDS 40.0%
! GAGCAATTAGCTTCAACTAG+TGG - chr2_4:9947509-9947528 None:intergenic 40.0%
CAAACTAAACCCAACAAACC+CGG - chr2_4:9947567-9947586 None:intergenic 40.0%
GCTTTGTGGAGACTTATTGG+TGG - chr2_4:9946089-9946108 None:intergenic 45.0%
! GGAGCTTTGTGGAGACTTAT+TGG - chr2_4:9946092-9946111 None:intergenic 45.0%
GTCCCTTCCACATTCTTCAT+TGG - chr2_4:9946635-9946654 None:intergenic 45.0%
TCATGGGCTTGGAGAAAGTA+TGG + chr2_4:9946674-9946693 Msa0314240:CDS 45.0%
GGATAAGGGGAACCTTTGAT+GGG - chr2_4:9946707-9946726 None:intergenic 45.0%
TGGATAAGGGGAACCTTTGA+TGG - chr2_4:9946708-9946727 None:intergenic 45.0%
TCAAAGGTTCCCCTTATCCA+AGG + chr2_4:9946708-9946727 Msa0314240:CDS 45.0%
GGGGATGAGAATGAATACCT+TGG - chr2_4:9946728-9946747 None:intergenic 45.0%
CAAAACTACGTGCAGTTCTG+CGG - chr2_4:9946966-9946985 None:intergenic 45.0%
ATGTTACAAGGAGAACGGTG+GGG - chr2_4:9947109-9947128 None:intergenic 45.0%
GTATGTTACAAGGAGAACGG+TGG - chr2_4:9947111-9947130 None:intergenic 45.0%
! GATCGGAGGTGTATGTTACA+AGG - chr2_4:9947121-9947140 None:intergenic 45.0%
TCGGGTTCTTGTTCTTGTTC+TGG - chr2_4:9947230-9947249 None:intergenic 45.0%
!! GTTGGAGTGTCCGATGTTTT+CGG + chr2_4:9947349-9947368 Msa0314240:CDS 45.0%
!! GGAGAAGGAAGTGTCTATGT+TGG + chr2_4:9947370-9947389 Msa0314240:CDS 45.0%
AGTGTCTATGTTGGGAGAAG+AGG + chr2_4:9947379-9947398 Msa0314240:CDS 45.0%
ATGTCGTTGTTTGCCGATCT+CGG + chr2_4:9947404-9947423 Msa0314240:CDS 45.0%
!! CGGGTTTGTTGGGTTTAGTT+TGG + chr2_4:9947565-9947584 Msa0314240:three_prime_UTR 45.0%
GCTTTGTGGAGACTTATTGG+TGG - chr2_4:9946089-9946108 None:intergenic 45.0%
! GGAGCTTTGTGGAGACTTAT+TGG - chr2_4:9946092-9946111 None:intergenic 45.0%
GTCCCTTCCACATTCTTCAT+TGG - chr2_4:9946635-9946654 None:intergenic 45.0%
TCATGGGCTTGGAGAAAGTA+TGG + chr2_4:9946674-9946693 Msa0314240:CDS 45.0%
GGATAAGGGGAACCTTTGAT+GGG - chr2_4:9946707-9946726 None:intergenic 45.0%
TGGATAAGGGGAACCTTTGA+TGG - chr2_4:9946708-9946727 None:intergenic 45.0%
TCAAAGGTTCCCCTTATCCA+AGG + chr2_4:9946708-9946727 Msa0314240:CDS 45.0%
GGGGATGAGAATGAATACCT+TGG - chr2_4:9946728-9946747 None:intergenic 45.0%
CAAAACTACGTGCAGTTCTG+CGG - chr2_4:9946966-9946985 None:intergenic 45.0%
ATGTTACAAGGAGAACGGTG+GGG - chr2_4:9947109-9947128 None:intergenic 45.0%
GTATGTTACAAGGAGAACGG+TGG - chr2_4:9947111-9947130 None:intergenic 45.0%
! GATCGGAGGTGTATGTTACA+AGG - chr2_4:9947121-9947140 None:intergenic 45.0%
TCGGGTTCTTGTTCTTGTTC+TGG - chr2_4:9947230-9947249 None:intergenic 45.0%
!! GTTGGAGTGTCCGATGTTTT+CGG + chr2_4:9947349-9947368 Msa0314240:CDS 45.0%
!! GGAGAAGGAAGTGTCTATGT+TGG + chr2_4:9947370-9947389 Msa0314240:CDS 45.0%
AGTGTCTATGTTGGGAGAAG+AGG + chr2_4:9947379-9947398 Msa0314240:CDS 45.0%
ATGTCGTTGTTTGCCGATCT+CGG + chr2_4:9947404-9947423 Msa0314240:CDS 45.0%
!! CGGGTTTGTTGGGTTTAGTT+TGG + chr2_4:9947565-9947584 Msa0314240:three_prime_UTR 45.0%
!!! TTTTTATTTTTTTAATTTTC+CGG + chr2_4:9947545-9947564 Msa0314240:three_prime_UTR 5.0%
!!! TTTTTATTTTTTTAATTTTC+CGG + chr2_4:9947545-9947564 Msa0314240:three_prime_UTR 5.0%
!! GGAGAGTGCCCTCTAAAACT+AGG - chr2_4:9946113-9946132 None:intergenic 50.0%
ACACTCCACCGTCTGATTCA+TGG + chr2_4:9946657-9946676 Msa0314240:CDS 50.0%
CACTCCACCGTCTGATTCAT+GGG + chr2_4:9946658-9946677 Msa0314240:CDS 50.0%
CTCCAAGCCCATGAATCAGA+CGG - chr2_4:9946668-9946687 None:intergenic 50.0%
!! GTAGTTTCTTGGTGGTGGCA+CGG - chr2_4:9947153-9947172 None:intergenic 50.0%
TTGCGGTAGTTTCTTGGTGG+TGG - chr2_4:9947158-9947177 None:intergenic 50.0%
GTGTTGCGGTAGTTTCTTGG+TGG - chr2_4:9947161-9947180 None:intergenic 50.0%
!! CTGGTGTTGCGGTAGTTTCT+TGG - chr2_4:9947164-9947183 None:intergenic 50.0%
!! GTTTGATGCGGTGTTGTTGC+TGG - chr2_4:9947183-9947202 None:intergenic 50.0%
ATTGCCACCGGTGATGAGTT+AGG + chr2_4:9947284-9947303 Msa0314240:CDS 50.0%
GATGAGTTAGGCGGATGGTT+TGG + chr2_4:9947296-9947315 Msa0314240:CDS 50.0%
TTTGGAGATGTGGAGGCGAT+CGG + chr2_4:9947314-9947333 Msa0314240:CDS 50.0%
! GTGTCCGATGTTTTCGGAGA+AGG + chr2_4:9947355-9947374 Msa0314240:CDS 50.0%
CAAAACACCGTCGAACACTC+CGG - chr2_4:9947437-9947456 None:intergenic 50.0%
!!! TGTTCGACGGTGTTTTGGAG+AGG + chr2_4:9947440-9947459 Msa0314240:CDS 50.0%
!! TTTTGGAGAGGTAGGAGGAG+TGG + chr2_4:9947452-9947471 Msa0314240:CDS 50.0%
TCCCACACTAACATCACCAC+CGG - chr2_4:9947486-9947505 None:intergenic 50.0%
!! GGAGAGTGCCCTCTAAAACT+AGG - chr2_4:9946113-9946132 None:intergenic 50.0%
ACACTCCACCGTCTGATTCA+TGG + chr2_4:9946657-9946676 Msa0314240:CDS 50.0%
CACTCCACCGTCTGATTCAT+GGG + chr2_4:9946658-9946677 Msa0314240:CDS 50.0%
CTCCAAGCCCATGAATCAGA+CGG - chr2_4:9946668-9946687 None:intergenic 50.0%
!! GTAGTTTCTTGGTGGTGGCA+CGG - chr2_4:9947153-9947172 None:intergenic 50.0%
TTGCGGTAGTTTCTTGGTGG+TGG - chr2_4:9947158-9947177 None:intergenic 50.0%
GTGTTGCGGTAGTTTCTTGG+TGG - chr2_4:9947161-9947180 None:intergenic 50.0%
!! CTGGTGTTGCGGTAGTTTCT+TGG - chr2_4:9947164-9947183 None:intergenic 50.0%
!! GTTTGATGCGGTGTTGTTGC+TGG - chr2_4:9947183-9947202 None:intergenic 50.0%
ATTGCCACCGGTGATGAGTT+AGG + chr2_4:9947284-9947303 Msa0314240:CDS 50.0%
GATGAGTTAGGCGGATGGTT+TGG + chr2_4:9947296-9947315 Msa0314240:CDS 50.0%
TTTGGAGATGTGGAGGCGAT+CGG + chr2_4:9947314-9947333 Msa0314240:CDS 50.0%
! GTGTCCGATGTTTTCGGAGA+AGG + chr2_4:9947355-9947374 Msa0314240:CDS 50.0%
CAAAACACCGTCGAACACTC+CGG - chr2_4:9947437-9947456 None:intergenic 50.0%
!!! TGTTCGACGGTGTTTTGGAG+AGG + chr2_4:9947440-9947459 Msa0314240:CDS 50.0%
!! TTTTGGAGAGGTAGGAGGAG+TGG + chr2_4:9947452-9947471 Msa0314240:CDS 50.0%
TCCCACACTAACATCACCAC+CGG - chr2_4:9947486-9947505 None:intergenic 50.0%
CAAGCCCATGAATCAGACGG+TGG - chr2_4:9946665-9946684 None:intergenic 55.0%
CACCGTCTGATTCATGGGCT+TGG + chr2_4:9946663-9946682 Msa0314240:CDS 55.0%
!! CGGTGTTGTTGCTGGTGTTG+CGG - chr2_4:9947175-9947194 None:intergenic 55.0%
CCATCCGCCTAACTCATCAC+CGG - chr2_4:9947294-9947313 None:intergenic 55.0%
! AGGCGGATGGTTTGGAGATG+TGG + chr2_4:9947304-9947323 Msa0314240:CDS 55.0%
! CGGATGGTTTGGAGATGTGG+AGG + chr2_4:9947307-9947326 Msa0314240:CDS 55.0%
ATCGGACACTCCAACACTGC+CGG - chr2_4:9947344-9947363 None:intergenic 55.0%
! AGAGTTGCCGGAGTGTTCGA+CGG + chr2_4:9947427-9947446 Msa0314240:CDS 55.0%
!! CGGAGTGTTCGACGGTGTTT+TGG + chr2_4:9947435-9947454 Msa0314240:CDS 55.0%
!!! CGACGGTGTTTTGGAGAGGT+AGG + chr2_4:9947444-9947463 Msa0314240:CDS 55.0%
!!! CGGTGTTTTGGAGAGGTAGG+AGG + chr2_4:9947447-9947466 Msa0314240:CDS 55.0%
! GCCGGTGGTGATGTTAGTGT+GGG + chr2_4:9947482-9947501 Msa0314240:CDS 55.0%
CAAGCCCATGAATCAGACGG+TGG - chr2_4:9946665-9946684 None:intergenic 55.0%
CACCGTCTGATTCATGGGCT+TGG + chr2_4:9946663-9946682 Msa0314240:CDS 55.0%
!! CGGTGTTGTTGCTGGTGTTG+CGG - chr2_4:9947175-9947194 None:intergenic 55.0%
CCATCCGCCTAACTCATCAC+CGG - chr2_4:9947294-9947313 None:intergenic 55.0%
! AGGCGGATGGTTTGGAGATG+TGG + chr2_4:9947304-9947323 Msa0314240:CDS 55.0%
! CGGATGGTTTGGAGATGTGG+AGG + chr2_4:9947307-9947326 Msa0314240:CDS 55.0%
ATCGGACACTCCAACACTGC+CGG - chr2_4:9947344-9947363 None:intergenic 55.0%
! AGAGTTGCCGGAGTGTTCGA+CGG + chr2_4:9947427-9947446 Msa0314240:CDS 55.0%
!! CGGAGTGTTCGACGGTGTTT+TGG + chr2_4:9947435-9947454 Msa0314240:CDS 55.0%
!!! CGACGGTGTTTTGGAGAGGT+AGG + chr2_4:9947444-9947463 Msa0314240:CDS 55.0%
!!! CGGTGTTTTGGAGAGGTAGG+AGG + chr2_4:9947447-9947466 Msa0314240:CDS 55.0%
! GCCGGTGGTGATGTTAGTGT+GGG + chr2_4:9947482-9947501 Msa0314240:CDS 55.0%
TGGCACGGCGTGGTTGTGAT+CGG - chr2_4:9947138-9947157 None:intergenic 60.0%
GCCACCGGTGATGAGTTAGG+CGG + chr2_4:9947287-9947306 Msa0314240:CDS 60.0%
TCCGCCTAACTCATCACCGG+TGG - chr2_4:9947291-9947310 None:intergenic 60.0%
CCGGTGATGAGTTAGGCGGA+TGG + chr2_4:9947291-9947310 Msa0314240:CDS 60.0%
TGCCGATCTCGGAGAGTTGC+CGG + chr2_4:9947415-9947434 Msa0314240:CDS 60.0%
CTCCGGCAACTCTCCGAGAT+CGG - chr2_4:9947420-9947439 None:intergenic 60.0%
AGAGGTAGGAGGAGTGGTGC+CGG + chr2_4:9947458-9947477 Msa0314240:CDS 60.0%
ACTAACATCACCACCGGCGC+CGG - chr2_4:9947480-9947499 None:intergenic 60.0%
! CGCCGGTGGTGATGTTAGTG+TGG + chr2_4:9947481-9947500 Msa0314240:CDS 60.0%
TGGCACGGCGTGGTTGTGAT+CGG - chr2_4:9947138-9947157 None:intergenic 60.0%
GCCACCGGTGATGAGTTAGG+CGG + chr2_4:9947287-9947306 Msa0314240:CDS 60.0%
TCCGCCTAACTCATCACCGG+TGG - chr2_4:9947291-9947310 None:intergenic 60.0%
CCGGTGATGAGTTAGGCGGA+TGG + chr2_4:9947291-9947310 Msa0314240:CDS 60.0%
TGCCGATCTCGGAGAGTTGC+CGG + chr2_4:9947415-9947434 Msa0314240:CDS 60.0%
CTCCGGCAACTCTCCGAGAT+CGG - chr2_4:9947420-9947439 None:intergenic 60.0%
AGAGGTAGGAGGAGTGGTGC+CGG + chr2_4:9947458-9947477 Msa0314240:CDS 60.0%
ACTAACATCACCACCGGCGC+CGG - chr2_4:9947480-9947499 None:intergenic 60.0%
! CGCCGGTGGTGATGTTAGTG+TGG + chr2_4:9947481-9947500 Msa0314240:CDS 60.0%
GGAGAACGGTGGGGTCCATG+TGG - chr2_4:9947100-9947119 None:intergenic 65.0%
CACGGCGTGGTTGTGATCGG+AGG - chr2_4:9947135-9947154 None:intergenic 65.0%
!! TTCTTGGTGGTGGCACGGCG+TGG - chr2_4:9947148-9947167 None:intergenic 65.0%
TGTGGAGGCGATCGGATCGC+CGG + chr2_4:9947322-9947341 Msa0314240:CDS 65.0%
GATCGGATCGCCGGCAGTGT+TGG + chr2_4:9947331-9947350 Msa0314240:CDS 65.0%
GGAGAACGGTGGGGTCCATG+TGG - chr2_4:9947100-9947119 None:intergenic 65.0%
CACGGCGTGGTTGTGATCGG+AGG - chr2_4:9947135-9947154 None:intergenic 65.0%
!! TTCTTGGTGGTGGCACGGCG+TGG - chr2_4:9947148-9947167 None:intergenic 65.0%
TGTGGAGGCGATCGGATCGC+CGG + chr2_4:9947322-9947341 Msa0314240:CDS 65.0%
GATCGGATCGCCGGCAGTGT+TGG + chr2_4:9947331-9947350 Msa0314240:CDS 65.0%
!! AGGAGGAGTGGTGCCGGCGC+CGG + chr2_4:9947464-9947483 Msa0314240:CDS 75.0%
!! AGGAGGAGTGGTGCCGGCGC+CGG + chr2_4:9947464-9947483 Msa0314240:CDS 75.0%
!!! AGGAGTGGTGCCGGCGCCGG+TGG + chr2_4:9947467-9947486 Msa0314240:CDS 80.0%
!!! AGGAGTGGTGCCGGCGCCGG+TGG + chr2_4:9947467-9947486 Msa0314240:CDS 80.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 9946032 9947813 9946032 ID=Msa0314240;Name=Msa0314240
chr2_4 mRNA 9946032 9947813 9946032 ID=Msa0314240-mRNA-1;Parent=Msa0314240;Name=Msa0314240-mRNA-1;_AED=0.02;_eAED=0.02;_QI=317|1|1|1|1|1|3|278|220
chr2_4 exon 9946032 9946383 9946032 ID=Msa0314240-mRNA-1:exon:3822;Parent=Msa0314240-mRNA-1
chr2_4 exon 9946601 9946729 9946601 ID=Msa0314240-mRNA-1:exon:3823;Parent=Msa0314240-mRNA-1
chr2_4 exon 9947037 9947813 9947037 ID=Msa0314240-mRNA-1:exon:3824;Parent=Msa0314240-mRNA-1
chr2_4 five_prime_UTR 9946032 9946348 9946032 ID=Msa0314240-mRNA-1:five_prime_utr;Parent=Msa0314240-mRNA-1
chr2_4 CDS 9946349 9946383 9946349 ID=Msa0314240-mRNA-1:cds;Parent=Msa0314240-mRNA-1
chr2_4 CDS 9946601 9946729 9946601 ID=Msa0314240-mRNA-1:cds;Parent=Msa0314240-mRNA-1
chr2_4 CDS 9947037 9947535 9947037 ID=Msa0314240-mRNA-1:cds;Parent=Msa0314240-mRNA-1
chr2_4 three_prime_UTR 9947536 9947813 9947536 ID=Msa0314240-mRNA-1:three_prime_utr;Parent=Msa0314240-mRNA-1
Gene Sequence

>Msa0314240

ATGGAAAGATCATCACTCTCTTCTTCTGCTAAAAGGCGAGGTATAAAGAAAAGGGTAGTAGAAATTCCAATGAAGAATGTGGAAGGGACTAACACTCCACCGTCTGATTCATGGGCTTGGAGAAAGTATGGTCAAAAACCCATCAAAGGTTCCCCTTATCCAAGAGGATACTATAGATGTAGCAGTTCAAAGAATTGTCCAGCAAGAAAACAAGTAGAAAGAAACCACATGGACCCCACCGTTCTCCTTGTAACATACACCTCCGATCACAACCACGCCGTGCCACCACCAAGAAACTACCGCAACACCAGCAACAACACCGCATCAAACAAAGACTCAGAATCAGAACCTGAACCAGAACAAGAACAAGAACCCGATGAAACGTTTACGAATATCGAAGAAAATTCAATGATTGCCACCGGTGATGAGTTAGGCGGATGGTTTGGAGATGTGGAGGCGATCGGATCGCCGGCAGTGTTGGAGTGTCCGATGTTTTCGGAGAAGGAAGTGTCTATGTTGGGAGAAGAGGAGATGTCGTTGTTTGCCGATCTCGGAGAGTTGCCGGAGTGTTCGACGGTGTTTTGGAGAGGTAGGAGGAGTGGTGCCGGCGCCGGTGGTGATGTTAGTGTGGGACCACTAGTTGAAGCTAATTGCTCGTTGTGA
Protein sequence

>Msa0314240

MERSSLSSSAKRRGIKKRVVEIPMKNVEGTNTPPSDSWAWRKYGQKPIKGSPYPRGYYRCSSSKNCPARKQVERNHMDPTVLLVTYTSDHNHAVPPPRNYRNTSNNTASNKDSESEPEPEQEQEPDETFTNIEENSMIATGDELGGWFGDVEAIGSPAVLECPMFSEKEVSMLGEEEMSLFADLGELPECSTVFWRGRRSGAGAGGDVSVGPLVEANCSL*