Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781800 | Q40345.1 | 85.230 | 413 | 38 | 2 | 1 | 391 | 22 | 433 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781800 | sp|Q40345|IDHP_MEDSA | 85.230 | 413 | 38 | 2 | 1 | 391 | 22 | 433 | 0.0 | 695 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781800 | G7KFV7 | 84.988 | 413 | 39 | 2 | 1 | 391 | 1 | 412 | 0.0 | 693 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000610 | Msa0781800 | -0.805342 | 1.398104e-49 | -8.615850e-47 |
| Msa0025060 | Msa0781800 | -0.815284 | 1.000130e-51 | -8.615850e-47 |
| Msa0025090 | Msa0781800 | -0.809862 | 1.533833e-50 | -8.615850e-47 |
| Msa0036560 | Msa0781800 | -0.807478 | 4.956434e-50 | -8.615850e-47 |
| Msa0046680 | Msa0781800 | 0.802585 | 5.231596e-49 | -8.615850e-47 |
| Msa0072590 | Msa0781800 | -0.807888 | 4.056211e-50 | -8.615850e-47 |
| Msa0081700 | Msa0781800 | -0.844926 | 5.583822e-59 | -8.615850e-47 |
| Msa0093740 | Msa0781800 | 0.800569 | 1.355403e-48 | -8.615850e-47 |
| Msa0099090 | Msa0781800 | -0.803384 | 3.577546e-49 | -8.615850e-47 |
| Msa0118620 | Msa0781800 | 0.807997 | 3.846155e-50 | -8.615850e-47 |
| Msa0604890 | Msa0781800 | -0.807318 | 5.358646e-50 | -8.615850e-47 |
| Msa0614480 | Msa0781800 | 0.833897 | 4.096678e-56 | -8.615850e-47 |
| Msa0617470 | Msa0781800 | -0.829589 | 4.729948e-55 | -8.615850e-47 |
| Msa0654500 | Msa0781800 | -0.801596 | 8.355030e-49 | -8.615850e-47 |
| Msa0700250 | Msa0781800 | -0.828820 | 7.269887e-55 | -8.615850e-47 |
| Msa0737030 | Msa0781800 | 0.873750 | 1.154716e-67 | -8.615850e-47 |
| Msa0742690 | Msa0781800 | -0.822503 | 2.287258e-53 | -8.615850e-47 |
| Msa0744540 | Msa0781800 | 0.831043 | 2.087406e-55 | -8.615850e-47 |
| Msa0744550 | Msa0781800 | 0.832196 | 1.085236e-55 | -8.615850e-47 |
| Msa0744560 | Msa0781800 | 0.846961 | 1.563204e-59 | -8.615850e-47 |
| Msa0779830 | Msa0781800 | -0.823477 | 1.356294e-53 | -8.615850e-47 |
| Msa0781800 | Msa0815650 | 0.940760 | 1.342934e-100 | -8.615850e-47 |
| Msa0781800 | Msa0826360 | 0.804026 | 2.631683e-49 | -8.615850e-47 |
| Msa0781800 | Msa0826370 | 0.832175 | 1.098274e-55 | -8.615850e-47 |
| Msa0781800 | Msa0826380 | 0.826816 | 2.204167e-54 | -8.615850e-47 |
| Msa0781800 | Msa0826450 | 0.851456 | 8.770647e-61 | -8.615850e-47 |
| Msa0781800 | Msa0827560 | -0.820808 | 5.639232e-53 | -8.615850e-47 |
| Msa0781800 | Msa0856020 | 0.860224 | 2.397156e-63 | -8.615850e-47 |
| Msa0781800 | Msa0862750 | -0.805817 | 1.111506e-49 | -8.615850e-47 |
| Msa0781800 | Msa0865810 | 0.850992 | 1.186088e-60 | -8.615850e-47 |
| Msa0781800 | Msa0865820 | 0.821689 | 3.531957e-53 | -8.615850e-47 |
| Msa0781800 | Msa0865830 | 0.818097 | 2.341720e-52 | -8.615850e-47 |
| Msa0781800 | Msa0870220 | -0.822852 | 1.898151e-53 | -8.615850e-47 |
| Msa0781800 | Msa0903460 | -0.828289 | 9.764787e-55 | -8.615850e-47 |
| Msa0781800 | Msa0906100 | -0.819579 | 1.078755e-52 | -8.615850e-47 |
| Msa0781800 | Msa0930080 | 0.811262 | 7.646374e-51 | -8.615850e-47 |
| Msa0781800 | Msa0933050 | -0.813845 | 2.082574e-51 | -8.615850e-47 |
| Msa0781800 | Msa0934290 | -0.814306 | 1.647962e-51 | -8.615850e-47 |
| Msa0781800 | Msa0935930 | -0.822727 | 2.029062e-53 | -8.615850e-47 |
| Msa0781800 | Msa0947420 | 0.811141 | 8.121766e-51 | -8.615850e-47 |
| Msa0781800 | Msa0970940 | -0.801288 | 9.664329e-49 | -8.615850e-47 |
| Msa0781800 | Msa0971780 | -0.813388 | 2.625794e-51 | -8.615850e-47 |
| Msa0781800 | Msa0972930 | -0.808697 | 2.726465e-50 | -8.615850e-47 |
| Msa0781800 | Msa1018210 | -0.809334 | 1.991956e-50 | -8.615850e-47 |
| Msa0781800 | Msa1022300 | -0.815092 | 1.103773e-51 | -8.615850e-47 |
| Msa0781800 | Msa1039150 | -0.807631 | 4.600686e-50 | -8.615850e-47 |
| Msa0781800 | Msa1045960 | 0.804351 | 2.252334e-49 | -8.615850e-47 |
| Msa0781800 | Msa1046880 | 0.803622 | 3.193273e-49 | -8.615850e-47 |
| Msa0781800 | Msa1057940 | -0.821923 | 3.119461e-53 | -8.615850e-47 |
| Msa0781800 | Msa1104020 | -0.803924 | 2.763551e-49 | -8.615850e-47 |
| Msa0781800 | Msa1106570 | -0.803051 | 4.191836e-49 | -8.615850e-47 |
| Msa0781800 | Msa1110900 | 0.807369 | 5.228870e-50 | -8.615850e-47 |
| Msa0781800 | Msa1157200 | 0.843534 | 1.320979e-58 | -8.615850e-47 |
| Msa0781800 | Msa1174280 | 0.808646 | 2.795481e-50 | -8.615850e-47 |
| Msa0781800 | Msa1192790 | -0.805387 | 1.368391e-49 | -8.615850e-47 |
| Msa0781800 | Msa1194480 | -0.802511 | 5.419449e-49 | -8.615850e-47 |
| Msa0781800 | Msa1235960 | -0.835259 | 1.862419e-56 | -8.615850e-47 |
| Msa0781800 | Msa1235990 | -0.842400 | 2.646718e-58 | -8.615850e-47 |
| Msa0781800 | Msa1299200 | 0.830046 | 3.660244e-55 | -8.615850e-47 |
| Msa0781800 | Msa1299220 | 0.823043 | 1.713254e-53 | -8.615850e-47 |
| Msa0781800 | Msa1313720 | 0.803360 | 3.618702e-49 | -8.615850e-47 |
| Msa0781800 | Msa1316090 | -0.830717 | 2.509806e-55 | -8.615850e-47 |
| Msa0781800 | Msa1327400 | -0.802942 | 4.415709e-49 | -8.615850e-47 |
| Msa0781800 | Msa1327420 | -0.801384 | 9.235410e-49 | -8.615850e-47 |
| Msa0781800 | Msa1344870 | -0.813232 | 2.840781e-51 | -8.615850e-47 |
| Msa0781800 | Msa1381300 | -0.808292 | 3.327664e-50 | -8.615850e-47 |
| Msa0781800 | Msa1453890 | 0.811571 | 6.550059e-51 | -8.615850e-47 |
| Msa0781800 | Msa1459920 | 0.831315 | 1.790138e-55 | -8.615850e-47 |
| Msa0781800 | Msa1459930 | 0.807163 | 5.779636e-50 | -8.615850e-47 |
| Msa0127910 | Msa0781800 | -0.823599 | 1.269917e-53 | -8.615850e-47 |
| Msa0139910 | Msa0781800 | 0.804909 | 1.722689e-49 | -8.615850e-47 |
| Msa0174060 | Msa0781800 | -0.834796 | 2.436575e-56 | -8.615850e-47 |
| Msa0224200 | Msa0781800 | 0.847269 | 1.286447e-59 | -8.615850e-47 |
| Msa0390590 | Msa0781800 | -0.826747 | 2.289861e-54 | -8.615850e-47 |
| Msa0413130 | Msa0781800 | 0.800531 | 1.379449e-48 | -8.615850e-47 |
| Msa0466850 | Msa0781800 | 0.803540 | 3.320593e-49 | -8.615850e-47 |
| Msa0480530 | Msa0781800 | 0.830610 | 2.664859e-55 | -8.615850e-47 |
| Msa0480540 | Msa0781800 | 0.825043 | 5.813593e-54 | -8.615850e-47 |
| Msa0480550 | Msa0781800 | 0.845406 | 4.141716e-59 | -8.615850e-47 |
| Msa0294200 | Msa0781800 | 0.823035 | 1.720053e-53 | -8.615850e-47 |
| Msa0506370 | Msa0781800 | 0.802637 | 5.104532e-49 | -8.615850e-47 |
| Msa0513670 | Msa0781800 | 0.809524 | 1.813853e-50 | -8.615850e-47 |
| Msa0526840 | Msa0781800 | -0.820030 | 8.506847e-53 | -8.615850e-47 |
| Msa0538050 | Msa0781800 | -0.808882 | 2.488852e-50 | -8.615850e-47 |
| Msa0559440 | Msa0781800 | -0.818114 | 2.320456e-52 | -8.615850e-47 |
| Msa0559640 | Msa0781800 | -0.823239 | 1.541612e-53 | -8.615850e-47 |
| Msa0561110 | Msa0781800 | 0.812647 | 3.815383e-51 | -8.615850e-47 |
| Msa0563230 | Msa0781800 | -0.800681 | 1.285932e-48 | -8.615850e-47 |
| Msa0573950 | Msa0781800 | 0.811410 | 7.099005e-51 | -8.615850e-47 |
| Msa0593600 | Msa0781800 | 0.809955 | 1.465215e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781800 | MtrunA17_Chr5g0433901 | 84.988 | 413 | 39 | 2 | 1 | 391 | 1 | 412 | 0.0 | 693 |
| Msa0781800 | MtrunA17_Chr2g0309401 | 73.494 | 415 | 81 | 5 | 1 | 390 | 1 | 411 | 0.0 | 610 |
| Msa0781800 | MtrunA17_Chr6g0449881 | 70.416 | 409 | 91 | 5 | 6 | 389 | 73 | 476 | 0.0 | 568 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0781800 | AT1G65930.1 | 74.279 | 416 | 76 | 5 | 1 | 391 | 1 | 410 | 0.0 | 611 |
| Msa0781800 | AT1G54340.1 | 71.014 | 414 | 90 | 5 | 1 | 389 | 1 | 409 | 0.0 | 593 |
| Msa0781800 | AT5G14590.1 | 68.447 | 412 | 100 | 6 | 2 | 388 | 72 | 478 | 0.0 | 560 |
| Msa0781800 | AT1G54340.2 | 74.419 | 301 | 69 | 4 | 1 | 298 | 1 | 296 | 2.19e-163 | 460 |
Find 134 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCCACTGACTCGGTGATTAA+AGG | 0.234489 | 5_2:-64408367 | Msa0781800:CDS |
| TCATTATAAAAGTAAATAAA+TGG | 0.234928 | 5_2:-64405905 | Msa0781800:three_prime_UTR |
| AAATGCCTTAGAAGTTTAAA+TGG | 0.244047 | 5_2:-64405975 | Msa0781800:three_prime_UTR |
| AATAAAACAGTCAAACAATA+TGG | 0.246275 | 5_2:+64406015 | None:intergenic |
| TTCAATAAATACCAGGAATA+AGG | 0.281383 | 5_2:+64408508 | None:intergenic |
| AAAATCCATTTAAACTTCTA+AGG | 0.281887 | 5_2:+64405970 | None:intergenic |
| AAAACCAGCTTCAGCTTTCC+TGG | 0.287132 | 5_2:+64408343 | None:intergenic |
| ATATGTTGACAGGGCAAAAC+TGG | 0.321227 | 5_2:-64406656 | Msa0781800:intron |
| GATTTGGCACTTATTCTTCA+TGG | 0.329970 | 5_2:-64406550 | Msa0781800:CDS |
| TGGGAAGATGACCAAGGATT+TGG | 0.355308 | 5_2:-64406566 | Msa0781800:CDS |
| GTGGTCTCACCCTGGCCTTC+CGG | 0.358843 | 5_2:+64408229 | None:intergenic |
| GCATGCCTTCCAATACATAT+TGG | 0.365350 | 5_2:+64408409 | None:intergenic |
| ATGAAATGACCCGTATTATC+TGG | 0.366530 | 5_2:-64409481 | Msa0781800:CDS |
| TGTATTGGAGTTGTAGAGTC+TGG | 0.370851 | 5_2:-64406586 | Msa0781800:CDS |
| GAAGCTCGTGTCAAGGAGTT+TGG | 0.371216 | 5_2:-64408777 | Msa0781800:CDS |
| AACATCCCTCGCCTTATTCC+TGG | 0.377795 | 5_2:-64408519 | Msa0781800:intron |
| CCAGGGTGAGACCACCGATT+TGG | 0.378111 | 5_2:-64408221 | Msa0781800:CDS |
| CTGCGTAGATTTGTGATTTG+AGG | 0.379174 | 5_2:-64406334 | Msa0781800:intron |
| ATGTTTCTGATTGTTCCATT+TGG | 0.380317 | 5_2:+64408732 | None:intergenic |
| TCCTTCATTTGTCTTATGGA+TGG | 0.388421 | 5_2:-64406061 | Msa0781800:three_prime_UTR |
| GGATGACAATGCTACACTAT+TGG | 0.389706 | 5_2:-64406635 | Msa0781800:CDS |
| AGTATGAGGCTGCTGGTATA+TGG | 0.391774 | 5_2:-64407793 | Msa0781800:CDS |
| GACTCCTCCACATACTCTTC+AGG | 0.392513 | 5_2:+64408754 | None:intergenic |
| GTCATTTCAGGGTTCACAAA+AGG | 0.407031 | 5_2:-64406845 | Msa0781800:intron |
| TGATATACTTCCAGATAATA+CGG | 0.410893 | 5_2:+64409471 | None:intergenic |
| AAGCTAGAGGCAGCTTGTAT+TGG | 0.414178 | 5_2:-64406601 | Msa0781800:CDS |
| CATAAATAGTGGTTGTTTGT+TGG | 0.421360 | 5_2:-64410911 | Msa0781800:five_prime_UTR |
| CCTTCATTTGTCTTATGGAT+GGG | 0.425188 | 5_2:-64406060 | Msa0781800:three_prime_UTR |
| GCACCGGCTCATTGATGATA+TGG | 0.426422 | 5_2:-64407681 | Msa0781800:CDS |
| CATATTTCAAGAAGTTTATG+AGG | 0.433565 | 5_2:-64407831 | Msa0781800:CDS |
| ATTGAGATATTGAAAACATT+GGG | 0.437297 | 5_2:-64410882 | Msa0781800:five_prime_UTR |
| ATAAAACAGTCAAACAATAT+GGG | 0.438479 | 5_2:+64406016 | None:intergenic |
| CTTTATTGGTTAAAGATTCA+AGG | 0.438587 | 5_2:-64407855 | Msa0781800:intron |
| GGATGCTATGCTATTTGTGC+TGG | 0.446890 | 5_2:+64406813 | None:intergenic |
| CCACTGACTCGGTGATTAAA+GGG | 0.449911 | 5_2:-64408366 | Msa0781800:CDS |
| TTTCAAGAAGTTTATGAGGC+AGG | 0.458695 | 5_2:-64407827 | Msa0781800:CDS |
| AGAGTGAAGGAGGTTATGTA+TGG | 0.460602 | 5_2:-64407643 | Msa0781800:CDS |
| CGCCAATCCCATCGTTGAGA+TGG | 0.461209 | 5_2:-64410700 | Msa0781800:CDS |
| TTCTTGCAACTAGGCTGTCT+AGG | 0.463457 | 5_2:-64406421 | Msa0781800:intron |
| TGGACAAAGCCAATATGTAT+TGG | 0.468376 | 5_2:-64408418 | Msa0781800:CDS |
| TGTATTGGAAGGCATGCTTT+TGG | 0.469894 | 5_2:-64408403 | Msa0781800:CDS |
| AAGAATAAGTGCCAAATCCT+TGG | 0.470345 | 5_2:+64406555 | None:intergenic |
| CCCATCCATAAGACAAATGA+AGG | 0.471039 | 5_2:+64406060 | None:intergenic |
| GGGTTTGATGACTTCTGTAT+TGG | 0.471973 | 5_2:-64407449 | Msa0781800:intron |
| ACAATTCTTAAGAAATATGA+TGG | 0.480666 | 5_2:-64407963 | Msa0781800:CDS |
| TCCCATGGTGGCGGTGGTGA+AGG | 0.482974 | 5_2:+64410740 | None:intergenic |
| TCATTTCAGGGTTCACAAAA+GGG | 0.485235 | 5_2:-64406844 | Msa0781800:intron |
| AAGAAGTTTATGAGGCAGGC+TGG | 0.487955 | 5_2:-64407823 | Msa0781800:CDS |
| CAGAGTGATTTCTTAGCTCA+AGG | 0.489025 | 5_2:-64407593 | Msa0781800:intron |
| TCCATCTTTGCTTGGACAAG+AGG | 0.489775 | 5_2:-64406793 | Msa0781800:CDS |
| ACCTCTTGTCCAAGCAAAGA+TGG | 0.491078 | 5_2:+64406792 | None:intergenic |
| ATCATGATAATCATAAATAG+TGG | 0.491412 | 5_2:-64410922 | Msa0781800:five_prime_UTR |
| TATTGAGATATTGAAAACAT+TGG | 0.492235 | 5_2:-64410883 | Msa0781800:five_prime_UTR |
| CTGGAAGTATATCAAGGATA+AGG | 0.496867 | 5_2:-64409462 | Msa0781800:intron |
| TGGATGGGAATGCAAGGGTT+GGG | 0.497364 | 5_2:-64406045 | Msa0781800:three_prime_UTR |
| CACCTTCACCACCGCCACCA+TGG | 0.502463 | 5_2:-64410742 | Msa0781800:exon |
| CAATGCAACACCTCCTTCAC+CGG | 0.504537 | 5_2:+64408183 | None:intergenic |
| GTCCATCTCAACGATGGGAT+TGG | 0.504713 | 5_2:+64410698 | None:intergenic |
| GTTTATAACTTCACCGGTGA+AGG | 0.506170 | 5_2:-64408196 | Msa0781800:CDS |
| TAAGACAAATGAAGGAAAAG+AGG | 0.509942 | 5_2:+64406068 | None:intergenic |
| CTTTCAAAAGAAATAAGAAA+GGG | 0.511085 | 5_2:-64406112 | Msa0781800:three_prime_UTR |
| GCATAGCATCCATCTTTGCT+TGG | 0.511490 | 5_2:-64406801 | Msa0781800:CDS |
| ATGGATGGGAATGCAAGGGT+TGG | 0.514148 | 5_2:-64406046 | Msa0781800:three_prime_UTR |
| TCTTGCAACTAGGCTGTCTA+GGG | 0.516308 | 5_2:-64406420 | Msa0781800:intron |
| GGGTGAGACCACCGATTTGG+AGG | 0.516484 | 5_2:-64408218 | Msa0781800:CDS |
| GTCTTATGGATGGGAATGCA+AGG | 0.516993 | 5_2:-64406051 | Msa0781800:three_prime_UTR |
| GAAGTTATAAACCTCCAAAT+CGG | 0.520537 | 5_2:+64408207 | None:intergenic |
| GTATTGGAGTTGTAGAGTCT+GGG | 0.522399 | 5_2:-64406585 | Msa0781800:CDS |
| TCATCGGTCTCATCACGATA+AGG | 0.527007 | 5_2:+64409276 | None:intergenic |
| GGGAACGAAGCATTGGCCAC+TGG | 0.529080 | 5_2:-64406091 | Msa0781800:three_prime_UTR |
| TTGGAGGTTTATAACTTCAC+CGG | 0.530673 | 5_2:-64408202 | Msa0781800:CDS |
| CTCAACTGTAACTTTATCAT+CGG | 0.532344 | 5_2:+64409260 | None:intergenic |
| CTGGAATCCCATGGTGGCGG+TGG | 0.533958 | 5_2:+64410734 | None:intergenic |
| CATCACGATAAGGAAGGCCT+AGG | 0.534182 | 5_2:+64409286 | None:intergenic |
| AAGAAAGGGGAACGAAGCAT+TGG | 0.538345 | 5_2:-64406098 | Msa0781800:three_prime_UTR |
| TTTGTAGTTCCGGAAGGCCA+GGG | 0.538541 | 5_2:-64408238 | Msa0781800:intron |
| AATGCGGAGAAAGAGAGGTT+AGG | 0.540183 | 5_2:+64410777 | None:intergenic |
| AGGCTGGAAATCAAAGTATG+AGG | 0.540407 | 5_2:-64407807 | Msa0781800:CDS |
| AGGGCCAGGAAAGCTGAAGC+TGG | 0.546183 | 5_2:-64408347 | Msa0781800:CDS |
| TCAATATCGGGCCACTGACT+CGG | 0.546877 | 5_2:-64408377 | Msa0781800:CDS |
| ACCTTCACCACCGCCACCAT+GGG | 0.547682 | 5_2:-64410741 | Msa0781800:exon |
| AGTATGTGGAGGAGTCCAAA+TGG | 0.548669 | 5_2:-64408747 | Msa0781800:CDS |
| AAATCAAAGTATGAGGCTGC+TGG | 0.551069 | 5_2:-64407800 | Msa0781800:CDS |
| ACTTTCAAAAGAAATAAGAA+AGG | 0.555167 | 5_2:-64406113 | Msa0781800:three_prime_UTR |
| GACTCGGTGATTAAAGGGCC+AGG | 0.555372 | 5_2:-64408361 | Msa0781800:CDS |
| GACATCAAGTACTTTGACCT+AGG | 0.560843 | 5_2:-64409303 | Msa0781800:CDS |
| TGGTATTATCAGATGGGAGA+AGG | 0.560849 | 5_2:-64406160 | Msa0781800:intron |
| GAGATATTGAAAACATTGGG+TGG | 0.562265 | 5_2:-64410879 | Msa0781800:five_prime_UTR |
| CCACCATATCATCAATGAGC+CGG | 0.562306 | 5_2:+64407678 | None:intergenic |
| AAGTGTGCAACTATCACTCC+AGG | 0.563401 | 5_2:-64409004 | Msa0781800:intron |
| GGTATTATCAGATGGGAGAA+GGG | 0.563937 | 5_2:-64406159 | Msa0781800:intron |
| TATTATCTGGAAGTATATCA+AGG | 0.565173 | 5_2:-64409468 | Msa0781800:CDS |
| AACCTCGTCAGTGTTGTACA+TGG | 0.567146 | 5_2:+64408159 | None:intergenic |
| CGGTGAAGGAGGTGTTGCAT+TGG | 0.567213 | 5_2:-64408182 | Msa0781800:CDS |
| CCCTTTAATCACCGAGTCAG+TGG | 0.567575 | 5_2:+64408366 | None:intergenic |
| AGTTTGGCCTGAAGAGTATG+TGG | 0.575672 | 5_2:-64408761 | Msa0781800:CDS |
| GATATACTTCCAGATAATAC+GGG | 0.575963 | 5_2:+64409472 | None:intergenic |
| GGAGAAGGGACAAGATTGAA+AGG | 0.577452 | 5_2:-64406145 | Msa0781800:three_prime_UTR |
| CCAAATCGGTGGTCTCACCC+TGG | 0.579651 | 5_2:+64408221 | None:intergenic |
| AATCCCATCGTTGAGATGGA+CGG | 0.579795 | 5_2:-64410696 | Msa0781800:intron |
| ATAAAAGTAAATAAATGGAA+AGG | 0.582270 | 5_2:-64405900 | Msa0781800:three_prime_UTR |
| TAACCGTCCATCTCAACGAT+GGG | 0.583372 | 5_2:+64410693 | None:intergenic |
| CAAAGCCAATATGTATTGGA+AGG | 0.585098 | 5_2:-64408414 | Msa0781800:CDS |
| GACAGATGAAGCTCGTGTCA+AGG | 0.586650 | 5_2:-64408784 | Msa0781800:intron |
| AGATATTGAAAACATTGGGT+GGG | 0.589249 | 5_2:-64410878 | Msa0781800:five_prime_UTR |
| GGACAAGAGGTCTAGCCCAT+AGG | 0.593822 | 5_2:-64406780 | Msa0781800:intron |
| TTCTTAAGAAATATGATGGA+AGG | 0.594992 | 5_2:-64407959 | Msa0781800:intron |
| TAAAACAGTCAAACAATATG+GGG | 0.611454 | 5_2:+64406017 | None:intergenic |
| TAAATACCAGGAATAAGGCG+AGG | 0.613657 | 5_2:+64408513 | None:intergenic |
| CGGTCTCATCACGATAAGGA+AGG | 0.614888 | 5_2:+64409280 | None:intergenic |
| TATAACTTCACCGGTGAAGG+AGG | 0.617817 | 5_2:-64408193 | Msa0781800:CDS |
| GCGGTGGTGAAGGTGATGAT+CGG | 0.618746 | 5_2:+64410750 | None:intergenic |
| GGATTTCACTGAAAAGCTAG+AGG | 0.619439 | 5_2:-64406614 | Msa0781800:CDS |
| GCATATGCACTCAAGAGTGA+AGG | 0.624556 | 5_2:-64407656 | Msa0781800:CDS |
| CCGGCTCATTGATGATATGG+TGG | 0.626860 | 5_2:-64407678 | Msa0781800:CDS |
| TTTCTGGAATCCCATGGTGG+CGG | 0.628826 | 5_2:+64410731 | None:intergenic |
| TTTCAGGGTTCACAAAAGGG+TGG | 0.629209 | 5_2:-64406841 | Msa0781800:intron |
| AAATACCAGGAATAAGGCGA+GGG | 0.630051 | 5_2:+64408514 | None:intergenic |
| GAGTGAAGGAGGTTATGTAT+GGG | 0.638514 | 5_2:-64407642 | Msa0781800:CDS |
| CTTGAGCTAAGAAATCACTC+TGG | 0.639119 | 5_2:+64407594 | None:intergenic |
| TTGATGTCCAACTCCACGAA+GGG | 0.641675 | 5_2:+64409318 | None:intergenic |
| GTTATAAACCTCCAAATCGG+TGG | 0.643639 | 5_2:+64408210 | None:intergenic |
| TCTTATGGATGGGAATGCAA+GGG | 0.644280 | 5_2:-64406050 | Msa0781800:three_prime_UTR |
| GGATCTTTAGGTATGAGCAC+CGG | 0.649060 | 5_2:-64407697 | Msa0781800:intron |
| TATGCACTCAAGAGTGAAGG+AGG | 0.651106 | 5_2:-64407653 | Msa0781800:CDS |
| TTTCAAAAGAAATAAGAAAG+GGG | 0.652860 | 5_2:-64406111 | Msa0781800:three_prime_UTR |
| CTAACCGTCCATCTCAACGA+TGG | 0.685218 | 5_2:+64410692 | None:intergenic |
| GGAGCATTATTTGAACACAG+AGG | 0.687364 | 5_2:-64406399 | Msa0781800:CDS |
| CTTGATGTCCAACTCCACGA+AGG | 0.690252 | 5_2:+64409317 | None:intergenic |
| TTGGCCTGAAGAGTATGTGG+AGG | 0.691036 | 5_2:-64408758 | Msa0781800:CDS |
| AATGAAGGAAAAGAGGCCAG+TGG | 0.701808 | 5_2:+64406075 | None:intergenic |
| CACACCATAAAATAGAGTCG+CGG | 0.707807 | 5_2:-64410846 | Msa0781800:five_prime_UTR |
| GGCCATGTACAACACTGACG+AGG | 0.710277 | 5_2:-64408161 | Msa0781800:intron |
| AGAGTCTGGGAAGATGACCA+AGG | 0.742586 | 5_2:-64406572 | Msa0781800:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAATACTATAACTAAAAAAT+CGG | + | chr5_2:64407729-64407748 | None:intergenic | 10.0% |
| !! | AAAAACTAAAATAATATGTT+AGG | + | chr5_2:64407905-64407924 | None:intergenic | 10.0% |
| !!! | AAAATTGATGTTTTTTTTTT+TGG | - | chr5_2:64410622-64410641 | Msa0781800:intron | 10.0% |
| !! | TCATTATAAAAGTAAATAAA+TGG | - | chr5_2:64410964-64410983 | Msa0781800:five_prime_UTR | 10.0% |
| !! | AATACAATAATACAATACTT+TGG | + | chr5_2:64406883-64406902 | None:intergenic | 15.0% |
| !! | TAAGAAAATTACATAAAATG+TGG | - | chr5_2:64407117-64407136 | Msa0781800:intron | 15.0% |
| !! | AAGAAAATTACATAAAATGT+GGG | - | chr5_2:64407118-64407137 | Msa0781800:intron | 15.0% |
| !!! | GTATAATTTTGAAACAAAAA+AGG | - | chr5_2:64407147-64407166 | Msa0781800:intron | 15.0% |
| !!! | AGTTTCATTTTTTTTTTTCT+GGG | - | chr5_2:64407469-64407488 | Msa0781800:intron | 15.0% |
| !! | TTAAATTAAAACATACTTGA+GGG | + | chr5_2:64407648-64407667 | None:intergenic | 15.0% |
| !! | ATTAAATTAAAACATACTTG+AGG | + | chr5_2:64407649-64407668 | None:intergenic | 15.0% |
| !! | ACAATTAATGAAATTAAGTT+CGG | + | chr5_2:64408175-64408194 | None:intergenic | 15.0% |
| !!! | TTTCTTAAGAATTGTATTTT+TGG | + | chr5_2:64408901-64408920 | None:intergenic | 15.0% |
| !! | AGGAATACAATTAATTAAAT+AGG | + | chr5_2:64408996-64409015 | None:intergenic | 15.0% |
| !! | AATTAATTGTATTCCTTTAT+TGG | - | chr5_2:64409000-64409019 | Msa0781800:intron | 15.0% |
| !! | ATAAAAGTAAATAAATGGAA+AGG | - | chr5_2:64410969-64410988 | Msa0781800:five_prime_UTR | 15.0% |
| !! | ATCATGATAATCATAAATAG+TGG | - | chr5_2:64405947-64405966 | Msa0781800:three_prime_UTR | 20.0% |
| !! | TATTGAGATATTGAAAACAT+TGG | - | chr5_2:64405986-64406005 | Msa0781800:three_prime_UTR | 20.0% |
| !! | ATTGAGATATTGAAAACATT+GGG | - | chr5_2:64405987-64406006 | Msa0781800:three_prime_UTR | 20.0% |
| !!! | TTGTTTCAGATATTTTTTTG+TGG | - | chr5_2:64406366-64406385 | Msa0781800:CDS | 20.0% |
| !! | AAATAAAAACGATCGAAAAA+TGG | + | chr5_2:64406464-64406483 | None:intergenic | 20.0% |
| !!! | GATTTTGTTGTTTTTTTGTT+TGG | - | chr5_2:64406631-64406650 | Msa0781800:CDS | 20.0% |
| !!! | TTAAATTTCACACTTTTTAC+CGG | + | chr5_2:64406722-64406741 | None:intergenic | 20.0% |
| !! | GTATTGTATTATTGTATTGT+TGG | - | chr5_2:64406885-64406904 | Msa0781800:intron | 20.0% |
| !! | TTCATTCATATTAATTTCCT+TGG | - | chr5_2:64407277-64407296 | Msa0781800:intron | 20.0% |
| !!! | CAGTTTCATTTTTTTTTTTC+TGG | - | chr5_2:64407468-64407487 | Msa0781800:intron | 20.0% |
| !! | TAACTCAACATTATATCATA+TGG | + | chr5_2:64407756-64407775 | None:intergenic | 20.0% |
| !! | GATATAATGTTGAGTTAAAT+CGG | - | chr5_2:64407759-64407778 | Msa0781800:intron | 20.0% |
| !!! | TTCTTATCATTGTTTTCTAA+TGG | - | chr5_2:64407804-64407823 | Msa0781800:CDS | 20.0% |
| !! | TTGTATTCAGCATTAAATAT+TGG | - | chr5_2:64408037-64408056 | Msa0781800:CDS | 20.0% |
| !! | ATATGAGTAGAGATATATAT+TGG | - | chr5_2:64408266-64408285 | Msa0781800:intron | 20.0% |
| !!! | ATATATTGGTTTCTTATTTG+CGG | - | chr5_2:64408280-64408299 | Msa0781800:intron | 20.0% |
| !! | AGAAAAATTCAATAAATACC+AGG | + | chr5_2:64408371-64408390 | None:intergenic | 20.0% |
| !!! | TTATTTTGTTTTTGTAGTTC+CGG | - | chr5_2:64408621-64408640 | Msa0781800:intron | 20.0% |
| !!! | TGTCTTTTATTAATTTTGGT+TGG | - | chr5_2:64408743-64408762 | Msa0781800:CDS | 20.0% |
| !! | AATATTTCAATGAAATATGC+TGG | - | chr5_2:64408772-64408791 | Msa0781800:CDS | 20.0% |
| !! | ACAATTCTTAAGAAATATGA+TGG | - | chr5_2:64408906-64408925 | Msa0781800:intron | 20.0% |
| !! | TGTTTATACTTCTATCTAAA+TGG | - | chr5_2:64409151-64409170 | Msa0781800:intron | 20.0% |
| !!! | TGAATAGATATTAGTTTTGA+GGG | + | chr5_2:64409376-64409395 | None:intergenic | 20.0% |
| !! | ATTAAGTATGTATCAGATTA+TGG | + | chr5_2:64409671-64409690 | None:intergenic | 20.0% |
| !! | TAATCTGATACATACTTAAT+TGG | - | chr5_2:64409671-64409690 | Msa0781800:intron | 20.0% |
| !! | TTGAATTATTGTATGATTTC+AGG | - | chr5_2:64409947-64409966 | Msa0781800:intron | 20.0% |
| !! | ATTTGTATAGTTGAGTATTA+TGG | - | chr5_2:64410125-64410144 | Msa0781800:intron | 20.0% |
| !! | TATAATATAATCAAGATACC+AGG | - | chr5_2:64410176-64410195 | Msa0781800:intron | 20.0% |
| !! | ATAATATAATCAAGATACCA+GGG | - | chr5_2:64410177-64410196 | Msa0781800:intron | 20.0% |
| !! | TTAACTTATCAGTTATCATT+GGG | - | chr5_2:64410353-64410372 | Msa0781800:intron | 20.0% |
| !!! | TTTTTTTTTTTGGTGTCAAA+TGG | - | chr5_2:64410632-64410651 | Msa0781800:intron | 20.0% |
| !! | ATAAGAAGCAAGATAAATTA+TGG | + | chr5_2:64410664-64410683 | None:intergenic | 20.0% |
| !!! | CAAACAAAAAAATTCCTTTT+AGG | + | chr5_2:64410688-64410707 | None:intergenic | 20.0% |
| !!! | CTAAAAGGAATTTTTTTGTT+TGG | - | chr5_2:64410686-64410705 | Msa0781800:intron | 20.0% |
| !! | ACTTTCAAAAGAAATAAGAA+AGG | - | chr5_2:64410756-64410775 | Msa0781800:five_prime_UTR | 20.0% |
| !! | CTTTCAAAAGAAATAAGAAA+GGG | - | chr5_2:64410757-64410776 | Msa0781800:five_prime_UTR | 20.0% |
| !! | TTTCAAAAGAAATAAGAAAG+GGG | - | chr5_2:64410758-64410777 | Msa0781800:five_prime_UTR | 20.0% |
| !! | ATAAAACAGTCAAACAATAT+GGG | + | chr5_2:64410856-64410875 | None:intergenic | 20.0% |
| !! | AATAAAACAGTCAAACAATA+TGG | + | chr5_2:64410857-64410876 | None:intergenic | 20.0% |
| !! | AAAATCCATTTAAACTTCTA+AGG | + | chr5_2:64410902-64410921 | None:intergenic | 20.0% |
| ! | TGAACAAAAATAACGAAACA+CGG | + | chr5_2:64406398-64406417 | None:intergenic | 25.0% |
| ! | AACAACGTGATTCTATAAAA+TGG | + | chr5_2:64406538-64406557 | None:intergenic | 25.0% |
| !!! | TGTTTTTATTACACTTTTCC+CGG | - | chr5_2:64406700-64406719 | Msa0781800:intron | 25.0% |
| !!! | TAAATTTCACACTTTTTACC+GGG | + | chr5_2:64406721-64406740 | None:intergenic | 25.0% |
| ! | CCAAACATAAACTCAATATT+TGG | + | chr5_2:64406762-64406781 | None:intergenic | 25.0% |
| ! | CCAAATATTGAGTTTATGTT+TGG | - | chr5_2:64406759-64406778 | Msa0781800:intron | 25.0% |
| !! | AATGAAGTATTTCAGAATCA+TGG | + | chr5_2:64406854-64406873 | None:intergenic | 25.0% |
| !! | TTCTCTGCTTTGTAATTTTA+AGG | - | chr5_2:64407053-64407072 | Msa0781800:intron | 25.0% |
| !! | TCTCTGCTTTGTAATTTTAA+GGG | - | chr5_2:64407054-64407073 | Msa0781800:intron | 25.0% |
| ! | TTAACCAAAAGATGATGAAA+TGG | - | chr5_2:64407244-64407263 | Msa0781800:intron | 25.0% |
| !! | TATTCCATTTCATCATCTTT+TGG | + | chr5_2:64407251-64407270 | None:intergenic | 25.0% |
| !!! | TTTTTTTTTTACTGCATTGC+AGG | - | chr5_2:64407363-64407382 | Msa0781800:intron | 25.0% |
| ! | TGATATACTTCCAGATAATA+CGG | + | chr5_2:64407401-64407420 | None:intergenic | 25.0% |
| !! | TATTATCTGGAAGTATATCA+AGG | - | chr5_2:64407401-64407420 | Msa0781800:intron | 25.0% |
| !!! | ATATGCAGAGTTTTTGTTTT+AGG | - | chr5_2:64407669-64407688 | Msa0781800:CDS | 25.0% |
| !! | ACAATCAGAAACATTTTGAA+TGG | - | chr5_2:64408146-64408165 | Msa0781800:intron | 25.0% |
| !! | ACTAGTTAGTTTACATATTC+TGG | - | chr5_2:64408217-64408236 | Msa0781800:CDS | 25.0% |
| ! | TTCAATAAATACCAGGAATA+AGG | + | chr5_2:64408364-64408383 | None:intergenic | 25.0% |
| !!! | TTTGGTATGCTTCTTTATTT+TGG | - | chr5_2:64408547-64408566 | Msa0781800:CDS | 25.0% |
| ! | ACATAAAAATAACCTTCAGT+TGG | + | chr5_2:64408600-64408619 | None:intergenic | 25.0% |
| !! | GCGTTGTCTTTTATTAATTT+TGG | - | chr5_2:64408739-64408758 | Msa0781800:CDS | 25.0% |
| !! | TTCTTAAGAAATATGATGGA+AGG | - | chr5_2:64408910-64408929 | Msa0781800:intron | 25.0% |
| ! | AATAGGAATTAATACAGCAA+AGG | + | chr5_2:64408979-64408998 | None:intergenic | 25.0% |
| ! | CTTGAATCTTTAACCAATAA+AGG | + | chr5_2:64409016-64409035 | None:intergenic | 25.0% |
| !! | CTTTATTGGTTAAAGATTCA+AGG | - | chr5_2:64409014-64409033 | Msa0781800:CDS | 25.0% |
| ! | CATATTTCAAGAAGTTTATG+AGG | - | chr5_2:64409038-64409057 | Msa0781800:intron | 25.0% |
| ! | TTCTATCTAAATGGATCTTT+AGG | - | chr5_2:64409160-64409179 | Msa0781800:intron | 25.0% |
| !!! | GTGAATAGATATTAGTTTTG+AGG | + | chr5_2:64409377-64409396 | None:intergenic | 25.0% |
| ! | ATATCTATTCACACTTGTAT+AGG | - | chr5_2:64409385-64409404 | Msa0781800:intron | 25.0% |
| !! | CTGACAAAAAGTATGTTTAA+AGG | + | chr5_2:64409463-64409482 | None:intergenic | 25.0% |
| !! | AGAGGATTTTCAATAAATGT+GGG | + | chr5_2:64409500-64409519 | None:intergenic | 25.0% |
| !! | TAGAGGATTTTCAATAAATG+TGG | + | chr5_2:64409501-64409520 | None:intergenic | 25.0% |
| ! | AACATCAAGATATATTGCAA+AGG | + | chr5_2:64409648-64409667 | None:intergenic | 25.0% |
| !!! | ACTATTGACTTAGCAATTAA+AGG | - | chr5_2:64409739-64409758 | Msa0781800:intron | 25.0% |
| !!! | CTATTGACTTAGCAATTAAA+GGG | - | chr5_2:64409740-64409759 | Msa0781800:intron | 25.0% |
| ! | AAAATAACCATACAAAAGTG+AGG | + | chr5_2:64409835-64409854 | None:intergenic | 25.0% |
| ! | ATTACACAGTAATTACCTAT+GGG | + | chr5_2:64410107-64410126 | None:intergenic | 25.0% |
| ! | AATTACACAGTAATTACCTA+TGG | + | chr5_2:64410108-64410127 | None:intergenic | 25.0% |
| ! | TAGAAAAATCTCTGATACAA+CGG | + | chr5_2:64410156-64410175 | None:intergenic | 25.0% |
| !!! | ATATATGCATTTTAATTCCC+TGG | + | chr5_2:64410197-64410216 | None:intergenic | 25.0% |
| ! | TAAAATGCATATATGTTGAC+AGG | - | chr5_2:64410203-64410222 | Msa0781800:intron | 25.0% |
| ! | AAAATGCATATATGTTGACA+GGG | - | chr5_2:64410204-64410223 | Msa0781800:intron | 25.0% |
| ! | GTTAACTTATCAGTTATCAT+TGG | - | chr5_2:64410352-64410371 | Msa0781800:intron | 25.0% |
| ! | TAACTTATCAGTTATCATTG+GGG | - | chr5_2:64410354-64410373 | Msa0781800:intron | 25.0% |
| ! | TAGTAGAAAAACAAATGCTT+TGG | + | chr5_2:64410397-64410416 | None:intergenic | 25.0% |
| !!! | AAAGGAATTTTTTTGTTTGG+TGG | - | chr5_2:64410689-64410708 | Msa0781800:intron | 25.0% |
| ! | TAAAACAGTCAAACAATATG+GGG | + | chr5_2:64410855-64410874 | None:intergenic | 25.0% |
| ! | AAATGCCTTAGAAGTTTAAA+TGG | - | chr5_2:64410894-64410913 | Msa0781800:five_prime_UTR | 25.0% |
| CATAAATAGTGGTTGTTTGT+TGG | - | chr5_2:64405958-64405977 | Msa0781800:three_prime_UTR | 30.0% | |
| AGATATTGAAAACATTGGGT+GGG | - | chr5_2:64405991-64406010 | Msa0781800:three_prime_UTR | 30.0% | |
| ATCGATGAAATCAAAGATGA+AGG | + | chr5_2:64406233-64406252 | None:intergenic | 30.0% | |
| AAAAATAACGAAACACGGAA+TGG | + | chr5_2:64406393-64406412 | None:intergenic | 30.0% | |
| ATAACGATAAAAGCTACAAC+TGG | + | chr5_2:64406600-64406619 | None:intergenic | 30.0% | |
| ! | TGTTTGGTTAAAAGAAGCAT+TGG | - | chr5_2:64406647-64406666 | Msa0781800:CDS | 30.0% |
| ! | TTTGAGATATGTCAGAATCA+TGG | - | chr5_2:64406785-64406804 | Msa0781800:CDS | 30.0% |
| TTGAGATATGTCAGAATCAT+GGG | - | chr5_2:64406786-64406805 | Msa0781800:CDS | 30.0% | |
| ! | TAGCTTTTGCAAAATCACAA+CGG | - | chr5_2:64406824-64406843 | Msa0781800:CDS | 30.0% |
| ! | ACTTGTAGCTAGTTTGTATT+GGG | - | chr5_2:64406949-64406968 | Msa0781800:intron | 30.0% |
| !! | GTTGACTTTATGAGTTTTTG+TGG | - | chr5_2:64406977-64406996 | Msa0781800:intron | 30.0% |
| ! | TTATGAGTTTTTGTGGTTTG+TGG | - | chr5_2:64406984-64407003 | Msa0781800:intron | 30.0% |
| ! | CTTGTTCAGACAATTTTATG+TGG | - | chr5_2:64407029-64407048 | Msa0781800:intron | 30.0% |
| ATTCCTAATCATAGTCATCA+CGG | - | chr5_2:64407201-64407220 | Msa0781800:intron | 30.0% | |
| ! | TGTTTATGACTTCATGCTTT+TGG | - | chr5_2:64407304-64407323 | Msa0781800:intron | 30.0% |
| ! | GTTTATGACTTCATGCTTTT+GGG | - | chr5_2:64407305-64407324 | Msa0781800:intron | 30.0% |
| GATATACTTCCAGATAATAC+GGG | + | chr5_2:64407400-64407419 | None:intergenic | 30.0% | |
| CTCAACTGTAACTTTATCAT+CGG | + | chr5_2:64407612-64407631 | None:intergenic | 30.0% | |
| ACGTTTCATGAGTAAGAAAT+AGG | - | chr5_2:64407955-64407974 | Msa0781800:intron | 30.0% | |
| CGTTTCATGAGTAAGAAATA+GGG | - | chr5_2:64407956-64407975 | Msa0781800:intron | 30.0% | |
| GTTTCATGAGTAAGAAATAG+GGG | - | chr5_2:64407957-64407976 | Msa0781800:intron | 30.0% | |
| TTCATGAACAAGCAATACAT+AGG | + | chr5_2:64407987-64408006 | None:intergenic | 30.0% | |
| TTCAGCATTAAATATTGGCA+TGG | - | chr5_2:64408042-64408061 | Msa0781800:CDS | 30.0% | |
| ! | ATGTTTCTGATTGTTCCATT+TGG | + | chr5_2:64408140-64408159 | None:intergenic | 30.0% |
| ! | AATTGATTAGCTACCAATGA+TGG | + | chr5_2:64408244-64408263 | None:intergenic | 30.0% |
| !! | GGGATGTTTTTGCAAATAAT+TGG | + | chr5_2:64408338-64408357 | None:intergenic | 30.0% |
| TTGAATATCTCAACATTTCC+AGG | - | chr5_2:64408427-64408446 | Msa0781800:intron | 30.0% | |
| !! | ATGCTTTTGGTGATCAATAT+CGG | - | chr5_2:64408479-64408498 | Msa0781800:intron | 30.0% |
| TAATTTATGTTGCCAACTGA+AGG | - | chr5_2:64408585-64408604 | Msa0781800:intron | 30.0% | |
| GAAGTTATAAACCTCCAAAT+CGG | + | chr5_2:64408665-64408684 | None:intergenic | 30.0% | |
| !!! | TTTTTGGTGCTAAGATAAAG+TGG | + | chr5_2:64408885-64408904 | None:intergenic | 30.0% |
| !! | GTTTATCAGTCACTTTCTTT+TGG | - | chr5_2:64409316-64409335 | Msa0781800:CDS | 30.0% |
| ! | ATTCACACTTGTATAGGTTT+TGG | - | chr5_2:64409391-64409410 | Msa0781800:intron | 30.0% |
| !!! | TTGTATAGGTTTTGGATCAT+TGG | - | chr5_2:64409399-64409418 | Msa0781800:intron | 30.0% |
| !!! | TGTATAGGTTTTGGATCATT+GGG | - | chr5_2:64409400-64409419 | Msa0781800:intron | 30.0% |
| ! | ATTTTTCCATGTCACACTAT+CGG | + | chr5_2:64409862-64409881 | None:intergenic | 30.0% |
| TGTTTGACACATACAATGTA+TGG | - | chr5_2:64409913-64409932 | Msa0781800:intron | 30.0% | |
| AGAAAAATCTCTGATACAAC+GGG | + | chr5_2:64410155-64410174 | None:intergenic | 30.0% | |
| AACTGATAAGTTAACGTACT+TGG | + | chr5_2:64410347-64410366 | None:intergenic | 30.0% | |
| GCTATATTATTCTTGCAACT+AGG | - | chr5_2:64410439-64410458 | Msa0781800:intron | 30.0% | |
| TTTGTGTGCTCAAATATGAA+TGG | + | chr5_2:64410604-64410623 | None:intergenic | 30.0% | |
| TCTTGCTTCTTATACCTAAA+AGG | - | chr5_2:64410671-64410690 | Msa0781800:intron | 30.0% | |
| TAAGACAAATGAAGGAAAAG+AGG | + | chr5_2:64410804-64410823 | None:intergenic | 30.0% | |
| ! | CTTTTCCTTCATTTGTCTTA+TGG | - | chr5_2:64410804-64410823 | Msa0781800:five_prime_UTR | 30.0% |
| GAGATATTGAAAACATTGGG+TGG | - | chr5_2:64405990-64406009 | Msa0781800:three_prime_UTR | 35.0% | |
| !!! | TTTGATTTTCTGGAATCCCA+TGG | + | chr5_2:64406147-64406166 | None:intergenic | 35.0% |
| TTCCTCTGCTTTGATTCAAT+TGG | - | chr5_2:64406338-64406357 | Msa0781800:exon | 35.0% | |
| ATCCAATTGAATCAAAGCAG+AGG | + | chr5_2:64406343-64406362 | None:intergenic | 35.0% | |
| TGAGATATGTCAGAATCATG+GGG | - | chr5_2:64406787-64406806 | Msa0781800:CDS | 35.0% | |
| ! | AGCTTTTGCAAAATCACAAC+GGG | - | chr5_2:64406825-64406844 | Msa0781800:CDS | 35.0% |
| ! | CACTTGTAGCTAGTTTGTAT+TGG | - | chr5_2:64406948-64406967 | Msa0781800:intron | 35.0% |
| TTACATAAAATGTGGGAGTC+AGG | - | chr5_2:64407125-64407144 | Msa0781800:intron | 35.0% | |
| GAAGTCATAAACATAGACCA+AGG | + | chr5_2:64407297-64407316 | None:intergenic | 35.0% | |
| ATGAAATGACCCGTATTATC+TGG | - | chr5_2:64407388-64407407 | Msa0781800:intron | 35.0% | |
| ! | CTGGAAGTATATCAAGGATA+AGG | - | chr5_2:64407407-64407426 | Msa0781800:intron | 35.0% |
| TAGGATTTAACTACGATACC+TGG | + | chr5_2:64407886-64407905 | None:intergenic | 35.0% | |
| TACATATTCTGGTCCATCAT+TGG | - | chr5_2:64408228-64408247 | Msa0781800:CDS | 35.0% | |
| TTTGCGGTCTGAAAAATTTC+AGG | - | chr5_2:64408296-64408315 | Msa0781800:intron | 35.0% | |
| ! | TACTCCTTTTCCTTGATGAA+CGG | - | chr5_2:64408398-64408417 | Msa0781800:CDS | 35.0% |
| ATATCTCAACATTTCCAGGT+TGG | - | chr5_2:64408431-64408450 | Msa0781800:intron | 35.0% | |
| TGGACAAAGCCAATATGTAT+TGG | - | chr5_2:64408451-64408470 | Msa0781800:intron | 35.0% | |
| CAAAGCCAATATGTATTGGA+AGG | - | chr5_2:64408455-64408474 | Msa0781800:intron | 35.0% | |
| !! | TGCTTTTGGTGATCAATATC+GGG | - | chr5_2:64408480-64408499 | Msa0781800:intron | 35.0% |
| !!! | TTTGTTTTTGTAGTTCCGGA+AGG | - | chr5_2:64408625-64408644 | Msa0781800:intron | 35.0% |
| TTGGAGGTTTATAACTTCAC+CGG | - | chr5_2:64408667-64408686 | Msa0781800:intron | 35.0% | |
| !! | GCAGTTGCTTTAGAGAAAAA+TGG | - | chr5_2:64408859-64408878 | Msa0781800:intron | 35.0% |
| TTTCAAGAAGTTTATGAGGC+AGG | - | chr5_2:64409042-64409061 | Msa0781800:intron | 35.0% | |
| GGAAAAAAAATCCACCTATC+TGG | + | chr5_2:64409355-64409374 | None:intergenic | 35.0% | |
| AGAATACTAAATATGCCTCG+AGG | + | chr5_2:64409697-64409716 | None:intergenic | 35.0% | |
| CGAGGCATATTTAGTATTCT+TGG | - | chr5_2:64409697-64409716 | Msa0781800:intron | 35.0% | |
| GATAGTGTGACATGGAAAAA+TGG | - | chr5_2:64409861-64409880 | Msa0781800:intron | 35.0% | |
| ! | TTTTGTGAACCCTGAAATGA+CGG | + | chr5_2:64410025-64410044 | None:intergenic | 35.0% |
| TCATTTCAGGGTTCACAAAA+GGG | - | chr5_2:64410025-64410044 | Msa0781800:intron | 35.0% | |
| AAGAATAAGTGCCAAATCCT+TGG | + | chr5_2:64410317-64410336 | None:intergenic | 35.0% | |
| GATTTGGCACTTATTCTTCA+TGG | - | chr5_2:64410319-64410338 | Msa0781800:intron | 35.0% | |
| ! | GTAGATTTGTGATTTGAGGT+AGG | - | chr5_2:64410539-64410558 | Msa0781800:intron | 35.0% |
| ! | TTTGAGGTAGGTGATTACTT+CGG | - | chr5_2:64410551-64410570 | Msa0781800:intron | 35.0% |
| TGCTCAAATATGAATGGAAC+CGG | + | chr5_2:64410598-64410617 | None:intergenic | 35.0% | |
| ! | TGTTTGGTGGTATTATCAGA+TGG | - | chr5_2:64410702-64410721 | Msa0781800:CDS | 35.0% |
| ! | GTTTGGTGGTATTATCAGAT+GGG | - | chr5_2:64410703-64410722 | Msa0781800:CDS | 35.0% |
| TCCTTCATTTGTCTTATGGA+TGG | - | chr5_2:64410808-64410827 | Msa0781800:five_prime_UTR | 35.0% | |
| CCTTCATTTGTCTTATGGAT+GGG | - | chr5_2:64410809-64410828 | Msa0781800:five_prime_UTR | 35.0% | |
| CACACCATAAAATAGAGTCG+CGG | - | chr5_2:64406023-64406042 | Msa0781800:three_prime_UTR | 40.0% | |
| ! | TATGCCGCGACTCTATTTTA+TGG | + | chr5_2:64406030-64406049 | None:intergenic | 40.0% |
| GAAAAAATGCGGAGAAAGAG+AGG | + | chr5_2:64406100-64406119 | None:intergenic | 40.0% | |
| GGTGATGATCGGAAAAAATG+CGG | + | chr5_2:64406111-64406130 | None:intergenic | 40.0% | |
| !! | GATTGGCGACTTTGATTTTC+TGG | + | chr5_2:64406157-64406176 | None:intergenic | 40.0% |
| GGAATGATAGATCAGATCGA+AGG | + | chr5_2:64406212-64406231 | None:intergenic | 40.0% | |
| TGACCGTGATGACTATGATT+AGG | + | chr5_2:64407207-64407226 | None:intergenic | 40.0% | |
| GTCAGAAGCAAGATAAAGAC+TGG | + | chr5_2:64407336-64407355 | None:intergenic | 40.0% | |
| !! | ATAGCTCATTTTTCCCTTCG+TGG | - | chr5_2:64407538-64407557 | Msa0781800:intron | 40.0% |
| GACATCAAGTACTTTGACCT+AGG | - | chr5_2:64407566-64407585 | Msa0781800:intron | 40.0% | |
| ACTAACACAAGTCTGCATGA+AGG | + | chr5_2:64407929-64407948 | None:intergenic | 40.0% | |
| ! | GTGCTGATCAAATTGTTGCA+TGG | - | chr5_2:64408009-64408028 | Msa0781800:CDS | 40.0% |
| AAATACCAGGAATAAGGCGA+GGG | + | chr5_2:64408358-64408377 | None:intergenic | 40.0% | |
| TAAATACCAGGAATAAGGCG+AGG | + | chr5_2:64408359-64408378 | None:intergenic | 40.0% | |
| ATCTCCGTTCATCAAGGAAA+AGG | + | chr5_2:64408405-64408424 | None:intergenic | 40.0% | |
| TCAAACATCTCCGTTCATCA+AGG | + | chr5_2:64408411-64408430 | None:intergenic | 40.0% | |
| GCATGCCTTCCAATACATAT+TGG | + | chr5_2:64408463-64408482 | None:intergenic | 40.0% | |
| !! | TGTATTGGAAGGCATGCTTT+TGG | - | chr5_2:64408466-64408485 | Msa0781800:intron | 40.0% |
| GTTATAAACCTCCAAATCGG+TGG | + | chr5_2:64408662-64408681 | None:intergenic | 40.0% | |
| GTTTATAACTTCACCGGTGA+AGG | - | chr5_2:64408673-64408692 | Msa0781800:intron | 40.0% | |
| ! | GTCTATTCGTTCTTTTGCTG+AGG | - | chr5_2:64408828-64408847 | Msa0781800:intron | 40.0% |
| AGGCTGGAAATCAAAGTATG+AGG | - | chr5_2:64409062-64409081 | Msa0781800:intron | 40.0% | |
| AAATCAAAGTATGAGGCTGC+TGG | - | chr5_2:64409069-64409088 | Msa0781800:intron | 40.0% | |
| AGAGTGAAGGAGGTTATGTA+TGG | - | chr5_2:64409226-64409245 | Msa0781800:intron | 40.0% | |
| GAGTGAAGGAGGTTATGTAT+GGG | - | chr5_2:64409227-64409246 | Msa0781800:intron | 40.0% | |
| TGGGCATGCAAAAACTATGA+TGG | - | chr5_2:64409246-64409265 | Msa0781800:CDS | 40.0% | |
| CTTGAGCTAAGAAATCACTC+TGG | + | chr5_2:64409278-64409297 | None:intergenic | 40.0% | |
| CAGAGTGATTTCTTAGCTCA+AGG | - | chr5_2:64409276-64409295 | Msa0781800:CDS | 40.0% | |
| GCAATTTCTTAGCTCCAGAT+AGG | - | chr5_2:64409338-64409357 | Msa0781800:intron | 40.0% | |
| ATTTCTTAGCTCCAGATAGG+TGG | - | chr5_2:64409341-64409360 | Msa0781800:intron | 40.0% | |
| ! | GGGTTTGATGACTTCTGTAT+TGG | - | chr5_2:64409420-64409439 | Msa0781800:intron | 40.0% |
| ACAGCAACTGAGAGATATAG+AGG | + | chr5_2:64409518-64409537 | None:intergenic | 40.0% | |
| ! | TACATACTTAATTGGCCTCG+AGG | - | chr5_2:64409679-64409698 | Msa0781800:intron | 40.0% |
| !! | TGCAACACCTCACTTTTGTA+TGG | - | chr5_2:64409825-64409844 | Msa0781800:intron | 40.0% |
| TTGAAACCGATAGTGTGACA+TGG | - | chr5_2:64409853-64409872 | Msa0781800:intron | 40.0% | |
| AGTGTGACATGGAAAAATGG+TGG | - | chr5_2:64409864-64409883 | Msa0781800:intron | 40.0% | |
| AATGGTGGCTTCTCATTGAT+TGG | - | chr5_2:64409879-64409898 | Msa0781800:intron | 40.0% | |
| CTTCTATGGTCTTTCCATCA+GGG | + | chr5_2:64409977-64409996 | None:intergenic | 40.0% | |
| TTTGTGAACCCTGAAATGAC+GGG | + | chr5_2:64410024-64410043 | None:intergenic | 40.0% | |
| GTCATTTCAGGGTTCACAAA+AGG | - | chr5_2:64410024-64410043 | Msa0781800:intron | 40.0% | |
| ATATGTTGACAGGGCAAAAC+TGG | - | chr5_2:64410213-64410232 | Msa0781800:intron | 40.0% | |
| GGATGACAATGCTACACTAT+TGG | - | chr5_2:64410234-64410253 | Msa0781800:intron | 40.0% | |
| GGATTTCACTGAAAAGCTAG+AGG | - | chr5_2:64410255-64410274 | Msa0781800:intron | 40.0% | |
| TGTATTGGAGTTGTAGAGTC+TGG | - | chr5_2:64410283-64410302 | Msa0781800:intron | 40.0% | |
| GTATTGGAGTTGTAGAGTCT+GGG | - | chr5_2:64410284-64410303 | Msa0781800:intron | 40.0% | |
| ! | GGAGCATTATTTGAACACAG+AGG | - | chr5_2:64410470-64410489 | Msa0781800:intron | 40.0% |
| CTGCGTAGATTTGTGATTTG+AGG | - | chr5_2:64410535-64410554 | Msa0781800:intron | 40.0% | |
| TCCTTCATATTTGAGCACAC+CGG | - | chr5_2:64410576-64410595 | Msa0781800:intron | 40.0% | |
| TGGTATTATCAGATGGGAGA+AGG | - | chr5_2:64410709-64410728 | Msa0781800:CDS | 40.0% | |
| GGTATTATCAGATGGGAGAA+GGG | - | chr5_2:64410710-64410729 | Msa0781800:CDS | 40.0% | |
| CCCATCCATAAGACAAATGA+AGG | + | chr5_2:64410812-64410831 | None:intergenic | 40.0% | |
| TCTTATGGATGGGAATGCAA+GGG | - | chr5_2:64410819-64410838 | Msa0781800:five_prime_UTR | 40.0% | |
| AATGCGGAGAAAGAGAGGTT+AGG | + | chr5_2:64406095-64406114 | None:intergenic | 45.0% | |
| !!! | GATTTTCTGGAATCCCATGG+TGG | + | chr5_2:64406144-64406163 | None:intergenic | 45.0% |
| AATCCCATCGTTGAGATGGA+CGG | - | chr5_2:64406173-64406192 | Msa0781800:intron | 45.0% | |
| TAACCGTCCATCTCAACGAT+GGG | + | chr5_2:64406179-64406198 | None:intergenic | 45.0% | |
| GGTTTGTGGTCGTAATTCAG+AGG | - | chr5_2:64406998-64407017 | Msa0781800:intron | 45.0% | |
| TTATCTTGCTTCTGACGTCG+TGG | - | chr5_2:64407340-64407359 | Msa0781800:intron | 45.0% | |
| ! | CATTTTTCCCTTCGTGGAGT+TGG | - | chr5_2:64407544-64407563 | Msa0781800:intron | 45.0% |
| TTGATGTCCAACTCCACGAA+GGG | + | chr5_2:64407554-64407573 | None:intergenic | 45.0% | |
| TCATCGGTCTCATCACGATA+AGG | + | chr5_2:64407596-64407615 | None:intergenic | 45.0% | |
| TTGCACTTGCACTGCTATGT+AGG | - | chr5_2:64407827-64407846 | Msa0781800:CDS | 45.0% | |
| AAGTGTGCAACTATCACTCC+AGG | - | chr5_2:64407865-64407884 | Msa0781800:intron | 45.0% | |
| ! | AGTTTGGCCTGAAGAGTATG+TGG | - | chr5_2:64408108-64408127 | Msa0781800:intron | 45.0% |
| AGTATGTGGAGGAGTCCAAA+TGG | - | chr5_2:64408122-64408141 | Msa0781800:intron | 45.0% | |
| !! | CATATTGGCTTTGTCCAACC+TGG | + | chr5_2:64408448-64408467 | None:intergenic | 45.0% |
| !! | CCACTGACTCGGTGATTAAA+GGG | - | chr5_2:64408503-64408522 | Msa0781800:intron | 45.0% |
| AAAACCAGCTTCAGCTTTCC+TGG | + | chr5_2:64408529-64408548 | None:intergenic | 45.0% | |
| !!! | GGAAAGCTGAAGCTGGTTTT+TGG | - | chr5_2:64408529-64408548 | Msa0781800:CDS | 45.0% |
| TATAACTTCACCGGTGAAGG+AGG | - | chr5_2:64408676-64408695 | Msa0781800:intron | 45.0% | |
| AACCTCGTCAGTGTTGTACA+TGG | + | chr5_2:64408713-64408732 | None:intergenic | 45.0% | |
| ATGTACAACACTGACGAGGT+TGG | - | chr5_2:64408712-64408731 | Msa0781800:intron | 45.0% | |
| !! | TTCTTTTGCTGAGGCGTCTA+TGG | - | chr5_2:64408837-64408856 | Msa0781800:intron | 45.0% |
| AAGAAGTTTATGAGGCAGGC+TGG | - | chr5_2:64409046-64409065 | Msa0781800:intron | 45.0% | |
| AGTATGAGGCTGCTGGTATA+TGG | - | chr5_2:64409076-64409095 | Msa0781800:intron | 45.0% | |
| GGATCTTTAGGTATGAGCAC+CGG | - | chr5_2:64409172-64409191 | Msa0781800:intron | 45.0% | |
| CCACCATATCATCAATGAGC+CGG | + | chr5_2:64409194-64409213 | None:intergenic | 45.0% | |
| GCATATGCACTCAAGAGTGA+AGG | - | chr5_2:64409213-64409232 | Msa0781800:intron | 45.0% | |
| TATGCACTCAAGAGTGAAGG+AGG | - | chr5_2:64409216-64409235 | Msa0781800:intron | 45.0% | |
| GTAGACTGTAGTGCTTCGTT+AGG | - | chr5_2:64409536-64409555 | Msa0781800:intron | 45.0% | |
| !! | TATTCTTGGTGTCTTCCTGC+TGG | - | chr5_2:64409711-64409730 | Msa0781800:intron | 45.0% |
| AGTCAATAGTACCAACCAGC+AGG | + | chr5_2:64409729-64409748 | None:intergenic | 45.0% | |
| !! | TGATTTCAGGTTTGCCCTGA+TGG | - | chr5_2:64409960-64409979 | Msa0781800:intron | 45.0% |
| GCTTCTATGGTCTTTCCATC+AGG | + | chr5_2:64409978-64409997 | None:intergenic | 45.0% | |
| GACAGTTACCCGTCATTTCA+GGG | - | chr5_2:64410013-64410032 | Msa0781800:intron | 45.0% | |
| TTTCAGGGTTCACAAAAGGG+TGG | - | chr5_2:64410028-64410047 | Msa0781800:intron | 45.0% | |
| ! | GGATGCTATGCTATTTGTGC+TGG | + | chr5_2:64410059-64410078 | None:intergenic | 45.0% |
| GCATAGCATCCATCTTTGCT+TGG | - | chr5_2:64410068-64410087 | Msa0781800:intron | 45.0% | |
| TCCATCTTTGCTTGGACAAG+AGG | - | chr5_2:64410076-64410095 | Msa0781800:intron | 45.0% | |
| ACCTCTTGTCCAAGCAAAGA+TGG | + | chr5_2:64410080-64410099 | None:intergenic | 45.0% | |
| AAGCTAGAGGCAGCTTGTAT+TGG | - | chr5_2:64410268-64410287 | Msa0781800:intron | 45.0% | |
| TGGGAAGATGACCAAGGATT+TGG | - | chr5_2:64410303-64410322 | Msa0781800:intron | 45.0% | |
| TTCTTGCAACTAGGCTGTCT+AGG | - | chr5_2:64410448-64410467 | Msa0781800:intron | 45.0% | |
| TCTTGCAACTAGGCTGTCTA+GGG | - | chr5_2:64410449-64410468 | Msa0781800:intron | 45.0% | |
| ACCGGTGTGCTCAAATATGA+AGG | + | chr5_2:64410580-64410599 | None:intergenic | 45.0% | |
| GGAGAAGGGACAAGATTGAA+AGG | - | chr5_2:64410724-64410743 | Msa0781800:CDS | 45.0% | |
| AAGAAAGGGGAACGAAGCAT+TGG | - | chr5_2:64410771-64410790 | Msa0781800:five_prime_UTR | 45.0% | |
| AATGAAGGAAAAGAGGCCAG+TGG | + | chr5_2:64410797-64410816 | None:intergenic | 45.0% | |
| GTCTTATGGATGGGAATGCA+AGG | - | chr5_2:64410818-64410837 | Msa0781800:five_prime_UTR | 45.0% | |
| !! | TTTCTGGAATCCCATGGTGG+CGG | + | chr5_2:64406141-64406160 | None:intergenic | 50.0% |
| GTCCATCTCAACGATGGGAT+TGG | + | chr5_2:64406174-64406193 | None:intergenic | 50.0% | |
| CTAACCGTCCATCTCAACGA+TGG | + | chr5_2:64406180-64406199 | None:intergenic | 50.0% | |
| CTTGATGTCCAACTCCACGA+AGG | + | chr5_2:64407555-64407574 | None:intergenic | 50.0% | |
| CATCACGATAAGGAAGGCCT+AGG | + | chr5_2:64407586-64407605 | None:intergenic | 50.0% | |
| CGGTCTCATCACGATAAGGA+AGG | + | chr5_2:64407592-64407611 | None:intergenic | 50.0% | |
| GACAGATGAAGCTCGTGTCA+AGG | - | chr5_2:64408085-64408104 | Msa0781800:intron | 50.0% | |
| GAAGCTCGTGTCAAGGAGTT+TGG | - | chr5_2:64408092-64408111 | Msa0781800:intron | 50.0% | |
| ! | TTGGCCTGAAGAGTATGTGG+AGG | - | chr5_2:64408111-64408130 | Msa0781800:intron | 50.0% |
| GACTCCTCCACATACTCTTC+AGG | + | chr5_2:64408118-64408137 | None:intergenic | 50.0% | |
| ! | AACATCCCTCGCCTTATTCC+TGG | - | chr5_2:64408350-64408369 | Msa0781800:CDS | 50.0% |
| ! | TCAATATCGGGCCACTGACT+CGG | - | chr5_2:64408492-64408511 | Msa0781800:intron | 50.0% |
| !! | GCCACTGACTCGGTGATTAA+AGG | - | chr5_2:64408502-64408521 | Msa0781800:intron | 50.0% |
| CCCTTTAATCACCGAGTCAG+TGG | + | chr5_2:64408506-64408525 | None:intergenic | 50.0% | |
| ! | TTTTGTAGTTCCGGAAGGCC+AGG | - | chr5_2:64408630-64408649 | Msa0781800:intron | 50.0% |
| TTTGTAGTTCCGGAAGGCCA+GGG | - | chr5_2:64408631-64408650 | Msa0781800:intron | 50.0% | |
| CAATGCAACACCTCCTTCAC+CGG | + | chr5_2:64408689-64408708 | None:intergenic | 50.0% | |
| !! | GCACCGGCTCATTGATGATA+TGG | - | chr5_2:64409188-64409207 | Msa0781800:intron | 50.0% |
| ! | CCGGCTCATTGATGATATGG+TGG | - | chr5_2:64409191-64409210 | Msa0781800:intron | 50.0% |
| !! | GAGGTGTTGCAGCAACATAG+TGG | + | chr5_2:64409816-64409835 | None:intergenic | 50.0% |
| ! | ATGGGCTGCTTCTGCTTCTA+TGG | + | chr5_2:64409991-64410010 | None:intergenic | 50.0% |
| ATAGAAGCAGAAGCAGCCCA+TGG | - | chr5_2:64409990-64410009 | Msa0781800:intron | 50.0% | |
| TAGAAGCAGAAGCAGCCCAT+GGG | - | chr5_2:64409991-64410010 | Msa0781800:intron | 50.0% | |
| !! | ATGACGGGTAACTGTCCCAT+GGG | + | chr5_2:64410009-64410028 | None:intergenic | 50.0% |
| !! | AATGACGGGTAACTGTCCCA+TGG | + | chr5_2:64410010-64410029 | None:intergenic | 50.0% |
| GGACAGTTACCCGTCATTTC+AGG | - | chr5_2:64410012-64410031 | Msa0781800:intron | 50.0% | |
| AGAGTCTGGGAAGATGACCA+AGG | - | chr5_2:64410297-64410316 | Msa0781800:intron | 50.0% | |
| ATGGATGGGAATGCAAGGGT+TGG | - | chr5_2:64410823-64410842 | Msa0781800:five_prime_UTR | 50.0% | |
| TGGATGGGAATGCAAGGGTT+GGG | - | chr5_2:64410824-64410843 | Msa0781800:five_prime_UTR | 50.0% | |
| GCGGTGGTGAAGGTGATGAT+CGG | + | chr5_2:64406122-64406141 | None:intergenic | 55.0% | |
| CGCCAATCCCATCGTTGAGA+TGG | - | chr5_2:64406169-64406188 | Msa0781800:intron | 55.0% | |
| !! | GACTCGGTGATTAAAGGGCC+AGG | - | chr5_2:64408508-64408527 | Msa0781800:intron | 55.0% |
| !! | CGGTGAAGGAGGTGTTGCAT+TGG | - | chr5_2:64408687-64408706 | Msa0781800:intron | 55.0% |
| GGCCATGTACAACACTGACG+AGG | - | chr5_2:64408708-64408727 | Msa0781800:intron | 55.0% | |
| !! | CTTGGTGTCTTCCTGCTGGT+TGG | - | chr5_2:64409715-64409734 | Msa0781800:intron | 55.0% |
| GGACAAGAGGTCTAGCCCAT+AGG | - | chr5_2:64410089-64410108 | Msa0781800:intron | 55.0% | |
| ACCTTCACCACCGCCACCAT+GGG | - | chr5_2:64406128-64406147 | Msa0781800:three_prime_UTR | 60.0% | |
| ATCATGGGGACTCGCTGCGA+TGG | - | chr5_2:64406801-64406820 | Msa0781800:CDS | 60.0% | |
| AGGGCCAGGAAAGCTGAAGC+TGG | - | chr5_2:64408522-64408541 | Msa0781800:CDS | 60.0% | |
| CCAAATCGGTGGTCTCACCC+TGG | + | chr5_2:64408651-64408670 | None:intergenic | 60.0% | |
| ! | CCAGGGTGAGACCACCGATT+TGG | - | chr5_2:64408648-64408667 | Msa0781800:intron | 60.0% |
| !! | GGGTGAGACCACCGATTTGG+AGG | - | chr5_2:64408651-64408670 | Msa0781800:intron | 60.0% |
| !! | GGGAACGAAGCATTGGCCAC+TGG | - | chr5_2:64410778-64410797 | Msa0781800:five_prime_UTR | 60.0% |
| CACCTTCACCACCGCCACCA+TGG | - | chr5_2:64406127-64406146 | Msa0781800:three_prime_UTR | 65.0% | |
| !! | TCCCATGGTGGCGGTGGTGA+AGG | + | chr5_2:64406132-64406151 | None:intergenic | 65.0% |
| !! | CTGGAATCCCATGGTGGCGG+TGG | + | chr5_2:64406138-64406157 | None:intergenic | 65.0% |
| ! | GTGGTCTCACCCTGGCCTTC+CGG | + | chr5_2:64408643-64408662 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 64405890 | 64411001 | 64405890 | ID=Msa0781800;Name=Msa0781800 |
| chr5_2 | mRNA | 64405890 | 64411001 | 64405890 | ID=Msa0781800-mRNA-1;Parent=Msa0781800;Name=Msa0781800-mRNA-1;_AED=0.16;_eAED=0.17;_QI=256|0.86|0.87|1|0.8|0.87|16|295|391 |
| chr5_2 | exon | 64405890 | 64406170 | 64405890 | ID=Msa0781800-mRNA-1:exon:19296;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64406335 | 64406430 | 64406335 | ID=Msa0781800-mRNA-1:exon:19295;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64406544 | 64406666 | 64406544 | ID=Msa0781800-mRNA-1:exon:19294;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64406781 | 64406857 | 64406781 | ID=Msa0781800-mRNA-1:exon:19293;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64407450 | 64407484 | 64407450 | ID=Msa0781800-mRNA-1:exon:19292;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64407594 | 64407709 | 64407594 | ID=Msa0781800-mRNA-1:exon:19291;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64407790 | 64407862 | 64407790 | ID=Msa0781800-mRNA-1:exon:19290;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64407960 | 64408062 | 64407960 | ID=Msa0781800-mRNA-1:exon:19289;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64408162 | 64408253 | 64408162 | ID=Msa0781800-mRNA-1:exon:19288;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64408341 | 64408442 | 64408341 | ID=Msa0781800-mRNA-1:exon:19287;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64408520 | 64408573 | 64408520 | ID=Msa0781800-mRNA-1:exon:19286;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64408724 | 64408801 | 64408724 | ID=Msa0781800-mRNA-1:exon:19285;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64409005 | 64409042 | 64409005 | ID=Msa0781800-mRNA-1:exon:19284;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64409240 | 64409349 | 64409240 | ID=Msa0781800-mRNA-1:exon:19283;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64409463 | 64409506 | 64409463 | ID=Msa0781800-mRNA-1:exon:19282;Parent=Msa0781800-mRNA-1 |
| chr5_2 | exon | 64410697 | 64411001 | 64410697 | ID=Msa0781800-mRNA-1:exon:19281;Parent=Msa0781800-mRNA-1 |
| chr5_2 | five_prime_UTR | 64410746 | 64411001 | 64410746 | ID=Msa0781800-mRNA-1:five_prime_utr;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64410697 | 64410745 | 64410697 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64409463 | 64409506 | 64409463 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64409240 | 64409349 | 64409240 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64409005 | 64409042 | 64409005 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64408724 | 64408801 | 64408724 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64408520 | 64408573 | 64408520 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64408341 | 64408442 | 64408341 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64408162 | 64408253 | 64408162 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64407960 | 64408062 | 64407960 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64407790 | 64407862 | 64407790 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64407594 | 64407709 | 64407594 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64407450 | 64407484 | 64407450 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64406781 | 64406857 | 64406781 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64406544 | 64406666 | 64406544 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | CDS | 64406349 | 64406430 | 64406349 | ID=Msa0781800-mRNA-1:cds;Parent=Msa0781800-mRNA-1 |
| chr5_2 | three_prime_UTR | 64406335 | 64406348 | 64406335 | ID=Msa0781800-mRNA-1:three_prime_utr;Parent=Msa0781800-mRNA-1 |
| chr5_2 | three_prime_UTR | 64405890 | 64406170 | 64405890 | ID=Msa0781800-mRNA-1:three_prime_utr;Parent=Msa0781800-mRNA-1 |
| Gene Sequence |
| Protein sequence |
