Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375330 | XP_003601651.2 | 97.854 | 466 | 10 | 0 | 1 | 466 | 1 | 466 | 0.0 | 943 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375330 | sp|Q93WX6|CNIF1_ARATH | 77.253 | 466 | 103 | 1 | 1 | 466 | 1 | 463 | 0.0 | 729 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375330 | G7JA74 | 97.854 | 466 | 10 | 0 | 1 | 466 | 1 | 466 | 0.0 | 943 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001550 | Msa0375330 | 0.842928 | 1.916105e-58 | -8.615850e-47 |
| Msa0002110 | Msa0375330 | 0.876014 | 1.954757e-68 | -8.615850e-47 |
| Msa0011410 | Msa0375330 | 0.820223 | 7.685098e-53 | -8.615850e-47 |
| Msa0011440 | Msa0375330 | 0.848020 | 7.995904e-60 | -8.615850e-47 |
| Msa0011450 | Msa0375330 | 0.874472 | 6.574200e-68 | -8.615850e-47 |
| Msa0013270 | Msa0375330 | -0.802717 | 4.913631e-49 | -8.615850e-47 |
| Msa0017300 | Msa0375330 | 0.868325 | 7.100807e-66 | -8.615850e-47 |
| Msa0024240 | Msa0375330 | 0.802661 | 5.047157e-49 | -8.615850e-47 |
| Msa0029520 | Msa0375330 | 0.812952 | 3.272596e-51 | -8.615850e-47 |
| Msa0030700 | Msa0375330 | -0.800594 | 1.339495e-48 | -8.615850e-47 |
| Msa0033220 | Msa0375330 | -0.825037 | 5.832008e-54 | -8.615850e-47 |
| Msa0033840 | Msa0375330 | 0.804522 | 2.074580e-49 | -8.615850e-47 |
| Msa0038150 | Msa0375330 | 0.824248 | 8.946895e-54 | -8.615850e-47 |
| Msa0044160 | Msa0375330 | -0.800929 | 1.144267e-48 | -8.615850e-47 |
| Msa0044530 | Msa0375330 | 0.805624 | 1.220049e-49 | -8.615850e-47 |
| Msa0047660 | Msa0375330 | 0.803390 | 3.566815e-49 | -8.615850e-47 |
| Msa0063940 | Msa0375330 | -0.813692 | 2.250218e-51 | -8.615850e-47 |
| Msa0065670 | Msa0375330 | 0.862222 | 5.905675e-64 | -8.615850e-47 |
| Msa0066890 | Msa0375330 | 0.808112 | 3.635073e-50 | -8.615850e-47 |
| Msa0077340 | Msa0375330 | -0.803783 | 2.955708e-49 | -8.615850e-47 |
| Msa0077570 | Msa0375330 | 0.842404 | 2.639821e-58 | -8.615850e-47 |
| Msa0078120 | Msa0375330 | -0.805561 | 1.257742e-49 | -8.615850e-47 |
| Msa0079880 | Msa0375330 | -0.808122 | 3.616044e-50 | -8.615850e-47 |
| Msa0080030 | Msa0375330 | -0.808437 | 3.098844e-50 | -8.615850e-47 |
| Msa0081610 | Msa0375330 | 0.831388 | 1.717537e-55 | -8.615850e-47 |
| Msa0093950 | Msa0375330 | 0.829298 | 5.565968e-55 | -8.615850e-47 |
| Msa0094170 | Msa0375330 | 0.868918 | 4.566588e-66 | -8.615850e-47 |
| Msa0095810 | Msa0375330 | 0.873812 | 1.099577e-67 | -8.615850e-47 |
| Msa0095890 | Msa0375330 | 0.829925 | 3.917322e-55 | -8.615850e-47 |
| Msa0102240 | Msa0375330 | -0.839743 | 1.319958e-57 | -8.615850e-47 |
| Msa0105140 | Msa0375330 | 0.808712 | 2.706158e-50 | -8.615850e-47 |
| Msa0111110 | Msa0375330 | 0.874319 | 7.412495e-68 | -8.615850e-47 |
| Msa0120100 | Msa0375330 | 0.823915 | 1.070745e-53 | -8.615850e-47 |
| Msa0120160 | Msa0375330 | 0.832303 | 1.021096e-55 | -8.615850e-47 |
| Msa0126000 | Msa0375330 | 0.814170 | 1.765999e-51 | -8.615850e-47 |
| Msa0129930 | Msa0375330 | 0.800554 | 1.365079e-48 | -8.615850e-47 |
| Msa0133140 | Msa0375330 | 0.830346 | 3.092613e-55 | -8.615850e-47 |
| Msa0136180 | Msa0375330 | 0.801881 | 7.303521e-49 | -8.615850e-47 |
| Msa0136870 | Msa0375330 | 0.803882 | 2.819091e-49 | -8.615850e-47 |
| Msa0138990 | Msa0375330 | 0.831254 | 1.852430e-55 | -8.615850e-47 |
| Msa0140770 | Msa0375330 | 0.819835 | 9.428046e-53 | -8.615850e-47 |
| Msa0146930 | Msa0375330 | -0.804617 | 1.982022e-49 | -8.615850e-47 |
| Msa0151380 | Msa0375330 | 0.839274 | 1.747308e-57 | -8.615850e-47 |
| Msa0151510 | Msa0375330 | 0.874746 | 5.308419e-68 | -8.615850e-47 |
| Msa0152220 | Msa0375330 | -0.802235 | 6.175882e-49 | -8.615850e-47 |
| Msa0152850 | Msa0375330 | -0.807965 | 3.906837e-50 | -8.615850e-47 |
| Msa0154880 | Msa0375330 | 0.819473 | 1.140117e-52 | -8.615850e-47 |
| Msa0154890 | Msa0375330 | 0.845489 | 3.935060e-59 | -8.615850e-47 |
| Msa0165640 | Msa0375330 | -0.815128 | 1.083190e-51 | -8.615850e-47 |
| Msa0167570 | Msa0375330 | 0.824754 | 6.798983e-54 | -8.615850e-47 |
| Msa0168770 | Msa0375330 | 0.809592 | 1.753860e-50 | -8.615850e-47 |
| Msa0173950 | Msa0375330 | 0.827614 | 1.419200e-54 | -8.615850e-47 |
| Msa0183310 | Msa0375330 | 0.821398 | 4.125028e-53 | -8.615850e-47 |
| Msa0187590 | Msa0375330 | 0.800575 | 1.351428e-48 | -8.615850e-47 |
| Msa0189560 | Msa0375330 | 0.830423 | 2.961728e-55 | -8.615850e-47 |
| Msa0198990 | Msa0375330 | -0.805650 | 1.204887e-49 | -8.615850e-47 |
| Msa0220400 | Msa0375330 | 0.841390 | 4.891196e-58 | -8.615850e-47 |
| Msa0225190 | Msa0375330 | 0.847054 | 1.473533e-59 | -8.615850e-47 |
| Msa0225790 | Msa0375330 | 0.873328 | 1.601597e-67 | -8.615850e-47 |
| Msa0227770 | Msa0375330 | 0.834286 | 3.272969e-56 | -8.615850e-47 |
| Msa0235290 | Msa0375330 | -0.831026 | 2.107112e-55 | -8.615850e-47 |
| Msa0365210 | Msa0375330 | -0.874287 | 7.595783e-68 | -8.615850e-47 |
| Msa0370580 | Msa0375330 | 0.800386 | 1.476683e-48 | -8.615850e-47 |
| Msa0371350 | Msa0375330 | 0.806450 | 8.179979e-50 | -8.615850e-47 |
| Msa0372300 | Msa0375330 | -0.816963 | 4.216316e-52 | -8.615850e-47 |
| Msa0375320 | Msa0375330 | 0.822012 | 2.973698e-53 | -8.615850e-47 |
| Msa0375330 | Msa0380400 | 0.843785 | 1.132015e-58 | -8.615850e-47 |
| Msa0375330 | Msa0380450 | 0.811709 | 6.113944e-51 | -8.615850e-47 |
| Msa0375330 | Msa0382050 | 0.820439 | 6.854599e-53 | -8.615850e-47 |
| Msa0375330 | Msa0385930 | 0.834970 | 2.202976e-56 | -8.615850e-47 |
| Msa0375330 | Msa0386230 | 0.802162 | 6.394382e-49 | -8.615850e-47 |
| Msa0375330 | Msa0386880 | -0.805355 | 1.389634e-49 | -8.615850e-47 |
| Msa0375330 | Msa0389080 | 0.829117 | 6.159052e-55 | -8.615850e-47 |
| Msa0375330 | Msa0397420 | 0.809745 | 1.625445e-50 | -8.615850e-47 |
| Msa0375330 | Msa0401860 | 0.813357 | 2.666258e-51 | -8.615850e-47 |
| Msa0375330 | Msa0402070 | 0.831913 | 1.274827e-55 | -8.615850e-47 |
| Msa0375330 | Msa0405460 | 0.823313 | 1.481224e-53 | -8.615850e-47 |
| Msa0375330 | Msa0405470 | 0.831512 | 1.600341e-55 | -8.615850e-47 |
| Msa0375330 | Msa0405550 | 0.835630 | 1.500878e-56 | -8.615850e-47 |
| Msa0375330 | Msa0412580 | 0.815417 | 9.346058e-52 | -8.615850e-47 |
| Msa0375330 | Msa0412790 | -0.803650 | 3.149809e-49 | -8.615850e-47 |
| Msa0375330 | Msa0417790 | 0.816665 | 4.919284e-52 | -8.615850e-47 |
| Msa0375330 | Msa0420610 | -0.813021 | 3.160149e-51 | -8.615850e-47 |
| Msa0375330 | Msa0437440 | 0.813919 | 2.005779e-51 | -8.615850e-47 |
| Msa0375330 | Msa0444770 | 0.802745 | 4.848785e-49 | -8.615850e-47 |
| Msa0375330 | Msa0457560 | -0.817978 | 2.490632e-52 | -8.615850e-47 |
| Msa0375330 | Msa0457570 | -0.836241 | 1.050084e-56 | -8.615850e-47 |
| Msa0375330 | Msa0461620 | 0.804235 | 2.381027e-49 | -8.615850e-47 |
| Msa0375330 | Msa0469770 | 0.809451 | 1.879602e-50 | -8.615850e-47 |
| Msa0375330 | Msa0474660 | 0.818064 | 2.382127e-52 | -8.615850e-47 |
| Msa0375330 | Msa0476170 | 0.848649 | 5.359137e-60 | -8.615850e-47 |
| Msa0375330 | Msa0476890 | 0.810235 | 1.274832e-50 | -8.615850e-47 |
| Msa0375330 | Msa0479760 | 0.821351 | 4.228447e-53 | -8.615850e-47 |
| Msa0375330 | Msa0483970 | 0.831750 | 1.398126e-55 | -8.615850e-47 |
| Msa0375330 | Msa0506700 | 0.813526 | 2.447964e-51 | -8.615850e-47 |
| Msa0375330 | Msa0512630 | -0.819437 | 1.162192e-52 | -8.615850e-47 |
| Msa0375330 | Msa0513970 | -0.808041 | 3.763957e-50 | -8.615850e-47 |
| Msa0375330 | Msa0523430 | 0.837695 | 4.465910e-57 | -8.615850e-47 |
| Msa0375330 | Msa0523490 | 0.862919 | 3.601518e-64 | -8.615850e-47 |
| Msa0375330 | Msa0525180 | 0.814092 | 1.837367e-51 | -8.615850e-47 |
| Msa0375330 | Msa0543560 | -0.824956 | 6.092600e-54 | -8.615850e-47 |
| Msa0375330 | Msa0548260 | 0.803813 | 2.914061e-49 | -8.615850e-47 |
| Msa0375330 | Msa0550980 | 0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0375330 | Msa0550990 | 0.829878 | 4.023942e-55 | -8.615850e-47 |
| Msa0375330 | Msa0559450 | 0.840438 | 8.694470e-58 | -8.615850e-47 |
| Msa0375330 | Msa0559650 | 0.852688 | 3.918412e-61 | -8.615850e-47 |
| Msa0375330 | Msa0565370 | 0.823096 | 1.665036e-53 | -8.615850e-47 |
| Msa0375330 | Msa0565430 | 0.821297 | 4.351859e-53 | -8.615850e-47 |
| Msa0375330 | Msa0567330 | -0.817246 | 3.641663e-52 | -8.615850e-47 |
| Msa0375330 | Msa0580410 | 0.813835 | 2.093443e-51 | -8.615850e-47 |
| Msa0375330 | Msa0580890 | 0.805830 | 1.104383e-49 | -8.615850e-47 |
| Msa0375330 | Msa0583360 | 0.831396 | 1.708978e-55 | -8.615850e-47 |
| Msa0375330 | Msa0590620 | 0.846169 | 2.571852e-59 | -8.615850e-47 |
| Msa0375330 | Msa0591340 | 0.804419 | 2.180022e-49 | -8.615850e-47 |
| Msa0375330 | Msa0596840 | -0.816591 | 5.111089e-52 | -8.615850e-47 |
| Msa0375330 | Msa0597370 | 0.814667 | 1.370851e-51 | -8.615850e-47 |
| Msa0375330 | Msa0599420 | -0.839514 | 1.513750e-57 | -8.615850e-47 |
| Msa0375330 | Msa0603180 | 0.819170 | 1.336924e-52 | -8.615850e-47 |
| Msa0375330 | Msa0606340 | 0.815097 | 1.100934e-51 | -8.615850e-47 |
| Msa0375330 | Msa0606350 | 0.820064 | 8.355861e-53 | -8.615850e-47 |
| Msa0375330 | Msa0630910 | 0.800838 | 1.194231e-48 | -8.615850e-47 |
| Msa0375330 | Msa0646410 | 0.842651 | 2.270254e-58 | -8.615850e-47 |
| Msa0375330 | Msa0654410 | 0.807620 | 4.623407e-50 | -8.615850e-47 |
| Msa0375330 | Msa0654490 | 0.852173 | 5.493720e-61 | -8.615850e-47 |
| Msa0375330 | Msa0657710 | -0.863762 | 1.975542e-64 | -8.615850e-47 |
| Msa0375330 | Msa0657720 | -0.842182 | 3.023315e-58 | -8.615850e-47 |
| Msa0375330 | Msa0673620 | 0.813768 | 2.165634e-51 | -8.615850e-47 |
| Msa0375330 | Msa0674480 | -0.840206 | 9.995388e-58 | -8.615850e-47 |
| Msa0375330 | Msa0676570 | 0.822487 | 2.307385e-53 | -8.615850e-47 |
| Msa0375330 | Msa0678380 | -0.812231 | 4.704126e-51 | -8.615850e-47 |
| Msa0375330 | Msa0684030 | 0.822379 | 2.445019e-53 | -8.615850e-47 |
| Msa0375330 | Msa0693340 | 0.835753 | 1.396669e-56 | -8.615850e-47 |
| Msa0375330 | Msa0702790 | -0.842538 | 2.431934e-58 | -8.615850e-47 |
| Msa0375330 | Msa0702800 | -0.866112 | 3.617151e-65 | -8.615850e-47 |
| Msa0375330 | Msa0703950 | -0.806785 | 6.948453e-50 | -8.615850e-47 |
| Msa0375330 | Msa0719270 | -0.801510 | 8.704466e-49 | -8.615850e-47 |
| Msa0375330 | Msa0719750 | -0.814428 | 1.548837e-51 | -8.615850e-47 |
| Msa0375330 | Msa0720410 | -0.809352 | 1.974011e-50 | -8.615850e-47 |
| Msa0375330 | Msa0722890 | -0.833208 | 6.083716e-56 | -8.615850e-47 |
| Msa0375330 | Msa0723090 | -0.853166 | 2.859459e-61 | -8.615850e-47 |
| Msa0375330 | Msa0726170 | 0.800937 | 1.140316e-48 | -8.615850e-47 |
| Msa0375330 | Msa0734250 | -0.840145 | 1.037358e-57 | -8.615850e-47 |
| Msa0375330 | Msa0741040 | -0.800434 | 1.444163e-48 | -8.615850e-47 |
| Msa0375330 | Msa0742370 | 0.863393 | 2.570608e-64 | -8.615850e-47 |
| Msa0375330 | Msa0745140 | -0.816300 | 5.937986e-52 | -8.615850e-47 |
| Msa0375330 | Msa0753590 | 0.830759 | 2.450366e-55 | -8.615850e-47 |
| Msa0375330 | Msa0758780 | 0.801037 | 1.087516e-48 | -8.615850e-47 |
| Msa0375330 | Msa0758810 | 0.803251 | 3.810414e-49 | -8.615850e-47 |
| Msa0375330 | Msa0769910 | 0.811476 | 6.870257e-51 | -8.615850e-47 |
| Msa0375330 | Msa0776640 | -0.817309 | 3.525370e-52 | -8.615850e-47 |
| Msa0375330 | Msa0779450 | 0.842407 | 2.635765e-58 | -8.615850e-47 |
| Msa0375330 | Msa0790650 | 0.814030 | 1.896018e-51 | -8.615850e-47 |
| Msa0375330 | Msa0795750 | -0.854179 | 1.462492e-61 | -8.615850e-47 |
| Msa0375330 | Msa0795910 | 0.813843 | 2.084441e-51 | -8.615850e-47 |
| Msa0375330 | Msa0801920 | 0.805312 | 1.418641e-49 | -8.615850e-47 |
| Msa0375330 | Msa0813160 | -0.805066 | 1.597263e-49 | -8.615850e-47 |
| Msa0375330 | Msa0823480 | 0.853984 | 1.664934e-61 | -8.615850e-47 |
| Msa0375330 | Msa0825920 | -0.810724 | 9.997512e-51 | -8.615850e-47 |
| Msa0375330 | Msa0827340 | 0.814685 | 1.358581e-51 | -8.615850e-47 |
| Msa0375330 | Msa0828950 | -0.841030 | 6.081566e-58 | -8.615850e-47 |
| Msa0375330 | Msa0828960 | -0.865895 | 4.235968e-65 | -8.615850e-47 |
| Msa0375330 | Msa0829210 | 0.806451 | 8.174861e-50 | -8.615850e-47 |
| Msa0375330 | Msa0829250 | 0.814375 | 1.590882e-51 | -8.615850e-47 |
| Msa0375330 | Msa0833200 | 0.831082 | 2.042386e-55 | -8.615850e-47 |
| Msa0375330 | Msa0833360 | 0.814000 | 1.925264e-51 | -8.615850e-47 |
| Msa0375330 | Msa0838120 | 0.806442 | 8.211390e-50 | -8.615850e-47 |
| Msa0375330 | Msa0840520 | -0.803772 | 2.971707e-49 | -8.615850e-47 |
| Msa0375330 | Msa0841050 | -0.800384 | 1.477987e-48 | -8.615850e-47 |
| Msa0375330 | Msa0853200 | 0.844291 | 8.280958e-59 | -8.615850e-47 |
| Msa0375330 | Msa0853590 | -0.805011 | 1.640136e-49 | -8.615850e-47 |
| Msa0375330 | Msa0858250 | 0.815255 | 1.015489e-51 | -8.615850e-47 |
| Msa0375330 | Msa0862480 | 0.861421 | 1.038474e-63 | -8.615850e-47 |
| Msa0375330 | Msa0865420 | -0.825528 | 4.461870e-54 | -8.615850e-47 |
| Msa0375330 | Msa0867660 | 0.830088 | 3.575783e-55 | -8.615850e-47 |
| Msa0375330 | Msa0868510 | 0.806906 | 6.550574e-50 | -8.615850e-47 |
| Msa0375330 | Msa0869420 | 0.831015 | 2.120813e-55 | -8.615850e-47 |
| Msa0375330 | Msa0870460 | 0.868001 | 9.026603e-66 | -8.615850e-47 |
| Msa0375330 | Msa0879930 | -0.802743 | 4.854594e-49 | -8.615850e-47 |
| Msa0375330 | Msa0881880 | 0.801656 | 8.124702e-49 | -8.615850e-47 |
| Msa0375330 | Msa0882480 | 0.828345 | 9.469353e-55 | -8.615850e-47 |
| Msa0375330 | Msa0903590 | 0.818351 | 2.050973e-52 | -8.615850e-47 |
| Msa0375330 | Msa0906660 | -0.807549 | 4.787387e-50 | -8.615850e-47 |
| Msa0375330 | Msa0908260 | 0.821747 | 3.426240e-53 | -8.615850e-47 |
| Msa0375330 | Msa0908270 | 0.817920 | 2.566913e-52 | -8.615850e-47 |
| Msa0375330 | Msa0908280 | 0.811872 | 5.632307e-51 | -8.615850e-47 |
| Msa0375330 | Msa0908350 | 0.804044 | 2.609748e-49 | -8.615850e-47 |
| Msa0375330 | Msa0908470 | 0.829087 | 6.264171e-55 | -8.615850e-47 |
| Msa0375330 | Msa0908500 | 0.804249 | 2.365265e-49 | -8.615850e-47 |
| Msa0375330 | Msa0908510 | 0.827643 | 1.396652e-54 | -8.615850e-47 |
| Msa0375330 | Msa0908630 | 0.831138 | 1.977959e-55 | -8.615850e-47 |
| Msa0375330 | Msa0908690 | 0.821923 | 3.118959e-53 | -8.615850e-47 |
| Msa0375330 | Msa0908700 | 0.826618 | 2.457359e-54 | -8.615850e-47 |
| Msa0375330 | Msa0909260 | -0.815204 | 1.042124e-51 | -8.615850e-47 |
| Msa0375330 | Msa0924900 | 0.823079 | 1.679977e-53 | -8.615850e-47 |
| Msa0375330 | Msa0935840 | 0.819458 | 1.149201e-52 | -8.615850e-47 |
| Msa0375330 | Msa0964400 | 0.827527 | 1.489027e-54 | -8.615850e-47 |
| Msa0375330 | Msa0971690 | 0.822245 | 2.625767e-53 | -8.615850e-47 |
| Msa0375330 | Msa0973080 | 0.827718 | 1.340281e-54 | -8.615850e-47 |
| Msa0375330 | Msa0978550 | 0.807756 | 4.325815e-50 | -8.615850e-47 |
| Msa0375330 | Msa0983600 | 0.831860 | 1.313742e-55 | -8.615850e-47 |
| Msa0375330 | Msa0983610 | 0.830640 | 2.621438e-55 | -8.615850e-47 |
| Msa0375330 | Msa1002550 | 0.818993 | 1.466297e-52 | -8.615850e-47 |
| Msa0375330 | Msa1019420 | -0.802062 | 6.703204e-49 | -8.615850e-47 |
| Msa0375330 | Msa1022420 | -0.802162 | 6.394736e-49 | -8.615850e-47 |
| Msa0375330 | Msa1031190 | 0.808607 | 2.850723e-50 | -8.615850e-47 |
| Msa0375330 | Msa1039440 | 0.833162 | 6.247168e-56 | -8.615850e-47 |
| Msa0375330 | Msa1044250 | -0.863139 | 3.081288e-64 | -8.615850e-47 |
| Msa0375330 | Msa1070370 | 0.806871 | 6.664007e-50 | -8.615850e-47 |
| Msa0375330 | Msa1086490 | 0.814547 | 1.457056e-51 | -8.615850e-47 |
| Msa0375330 | Msa1086670 | 0.815677 | 8.178565e-52 | -8.615850e-47 |
| Msa0375330 | Msa1086760 | 0.831830 | 1.336504e-55 | -8.615850e-47 |
| Msa0375330 | Msa1086770 | 0.834150 | 3.540338e-56 | -8.615850e-47 |
| Msa0375330 | Msa1086940 | 0.827759 | 1.309944e-54 | -8.615850e-47 |
| Msa0375330 | Msa1087070 | 0.826274 | 2.967588e-54 | -8.615850e-47 |
| Msa0375330 | Msa1087080 | 0.815002 | 1.155387e-51 | -8.615850e-47 |
| Msa0375330 | Msa1087090 | 0.832378 | 9.784164e-56 | -8.615850e-47 |
| Msa0375330 | Msa1092310 | -0.823490 | 1.347128e-53 | -8.615850e-47 |
| Msa0375330 | Msa1106590 | -0.872322 | 3.475438e-67 | -8.615850e-47 |
| Msa0375330 | Msa1119420 | 0.809564 | 1.778061e-50 | -8.615850e-47 |
| Msa0375330 | Msa1125250 | -0.823951 | 1.050218e-53 | -8.615850e-47 |
| Msa0375330 | Msa1128520 | 0.821219 | 4.536093e-53 | -8.615850e-47 |
| Msa0375330 | Msa1128610 | 0.823094 | 1.666394e-53 | -8.615850e-47 |
| Msa0375330 | Msa1129120 | 0.822388 | 2.432827e-53 | -8.615850e-47 |
| Msa0375330 | Msa1129200 | 0.843355 | 1.474495e-58 | -8.615850e-47 |
| Msa0375330 | Msa1129880 | 0.803094 | 4.107226e-49 | -8.615850e-47 |
| Msa0375330 | Msa1130060 | -0.813384 | 2.631132e-51 | -8.615850e-47 |
| Msa0375330 | Msa1130150 | 0.808393 | 3.167044e-50 | -8.615850e-47 |
| Msa0375330 | Msa1132880 | 0.812919 | 3.326983e-51 | -8.615850e-47 |
| Msa0375330 | Msa1143370 | 0.818365 | 2.036330e-52 | -8.615850e-47 |
| Msa0375330 | Msa1149910 | -0.833119 | 6.405324e-56 | -8.615850e-47 |
| Msa0375330 | Msa1154320 | -0.836099 | 1.140926e-56 | -8.615850e-47 |
| Msa0375330 | Msa1155170 | 0.802023 | 6.827924e-49 | -8.615850e-47 |
| Msa0375330 | Msa1156120 | 0.802680 | 5.002060e-49 | -8.615850e-47 |
| Msa0375330 | Msa1158180 | 0.808612 | 2.843670e-50 | -8.615850e-47 |
| Msa0375330 | Msa1191530 | 0.805247 | 1.463463e-49 | -8.615850e-47 |
| Msa0375330 | Msa1192360 | -0.803319 | 3.688842e-49 | -8.615850e-47 |
| Msa0375330 | Msa1199540 | 0.801966 | 7.017720e-49 | -8.615850e-47 |
| Msa0375330 | Msa1203650 | -0.805125 | 1.552169e-49 | -8.615850e-47 |
| Msa0375330 | Msa1207920 | 0.834651 | 2.649817e-56 | -8.615850e-47 |
| Msa0375330 | Msa1225860 | 0.827645 | 1.395679e-54 | -8.615850e-47 |
| Msa0375330 | Msa1228580 | -0.808658 | 2.779286e-50 | -8.615850e-47 |
| Msa0375330 | Msa1238660 | -0.802131 | 6.490002e-49 | -8.615850e-47 |
| Msa0375330 | Msa1247200 | 0.803566 | 3.278919e-49 | -8.615850e-47 |
| Msa0375330 | Msa1255210 | -0.801844 | 7.433843e-49 | -8.615850e-47 |
| Msa0375330 | Msa1266120 | 0.809602 | 1.745141e-50 | -8.615850e-47 |
| Msa0375330 | Msa1267340 | 0.804223 | 2.395108e-49 | -8.615850e-47 |
| Msa0375330 | Msa1273620 | 0.828839 | 7.193398e-55 | -8.615850e-47 |
| Msa0375330 | Msa1283930 | -0.817573 | 3.075207e-52 | -8.615850e-47 |
| Msa0375330 | Msa1283960 | -0.802327 | 5.914405e-49 | -8.615850e-47 |
| Msa0375330 | Msa1287100 | 0.823027 | 1.727730e-53 | -8.615850e-47 |
| Msa0375330 | Msa1295480 | 0.846533 | 2.046568e-59 | -8.615850e-47 |
| Msa0375330 | Msa1301280 | 0.842179 | 3.028971e-58 | -8.615850e-47 |
| Msa0375330 | Msa1303690 | 0.800744 | 1.248290e-48 | -8.615850e-47 |
| Msa0375330 | Msa1311600 | 0.829288 | 5.598200e-55 | -8.615850e-47 |
| Msa0375330 | Msa1322960 | -0.820424 | 6.911092e-53 | -8.615850e-47 |
| Msa0375330 | Msa1326710 | -0.813863 | 2.064097e-51 | -8.615850e-47 |
| Msa0375330 | Msa1331570 | 0.809502 | 1.833156e-50 | -8.615850e-47 |
| Msa0375330 | Msa1341710 | 0.805993 | 1.020565e-49 | -8.615850e-47 |
| Msa0375330 | Msa1341840 | -0.815748 | 7.886921e-52 | -8.615850e-47 |
| Msa0375330 | Msa1342960 | 0.828875 | 7.048814e-55 | -8.615850e-47 |
| Msa0375330 | Msa1348170 | 0.988011 | 2.242940e-172 | -8.615850e-47 |
| Msa0375330 | Msa1352600 | 0.819209 | 1.309840e-52 | -8.615850e-47 |
| Msa0375330 | Msa1354360 | 0.827225 | 1.759402e-54 | -8.615850e-47 |
| Msa0375330 | Msa1354370 | 0.805312 | 1.418641e-49 | -8.615850e-47 |
| Msa0375330 | Msa1354400 | 0.827143 | 1.840628e-54 | -8.615850e-47 |
| Msa0375330 | Msa1354520 | 0.828646 | 8.008666e-55 | -8.615850e-47 |
| Msa0375330 | Msa1354530 | 0.825510 | 4.507508e-54 | -8.615850e-47 |
| Msa0375330 | Msa1354650 | 0.827680 | 1.368725e-54 | -8.615850e-47 |
| Msa0375330 | Msa1354660 | 0.829671 | 4.517963e-55 | -8.615850e-47 |
| Msa0375330 | Msa1354780 | 0.821652 | 3.602971e-53 | -8.615850e-47 |
| Msa0375330 | Msa1354790 | 0.829174 | 5.967510e-55 | -8.615850e-47 |
| Msa0375330 | Msa1354960 | 0.831533 | 1.582157e-55 | -8.615850e-47 |
| Msa0375330 | Msa1356600 | 0.932180 | 1.254272e-94 | -8.615850e-47 |
| Msa0375330 | Msa1361670 | 0.824296 | 8.718152e-54 | -8.615850e-47 |
| Msa0375330 | Msa1363170 | 0.802499 | 5.451176e-49 | -8.615850e-47 |
| Msa0375330 | Msa1365990 | 0.822022 | 2.957756e-53 | -8.615850e-47 |
| Msa0375330 | Msa1366020 | 0.827048 | 1.940309e-54 | -8.615850e-47 |
| Msa0375330 | Msa1366030 | 0.825728 | 4.002105e-54 | -8.615850e-47 |
| Msa0375330 | Msa1366060 | 0.828658 | 7.952725e-55 | -8.615850e-47 |
| Msa0375330 | Msa1368260 | 0.824584 | 7.457079e-54 | -8.615850e-47 |
| Msa0375330 | Msa1368390 | -0.826878 | 2.130701e-54 | -8.615850e-47 |
| Msa0375330 | Msa1372770 | 0.804578 | 2.020095e-49 | -8.615850e-47 |
| Msa0375330 | Msa1375610 | 0.843060 | 1.766913e-58 | -8.615850e-47 |
| Msa0375330 | Msa1376550 | 0.839803 | 1.273167e-57 | -8.615850e-47 |
| Msa0375330 | Msa1385360 | 0.822691 | 2.068594e-53 | -8.615850e-47 |
| Msa0375330 | Msa1385390 | 0.829158 | 6.018086e-55 | -8.615850e-47 |
| Msa0375330 | Msa1387450 | 0.818389 | 2.011072e-52 | -8.615850e-47 |
| Msa0375330 | Msa1388030 | 0.812185 | 4.815136e-51 | -8.615850e-47 |
| Msa0375330 | Msa1388720 | 0.822682 | 2.079080e-53 | -8.615850e-47 |
| Msa0375330 | Msa1389900 | -0.819673 | 1.026250e-52 | -8.615850e-47 |
| Msa0375330 | Msa1391130 | 0.824022 | 1.010671e-53 | -8.615850e-47 |
| Msa0375330 | Msa1391140 | 0.829493 | 4.990299e-55 | -8.615850e-47 |
| Msa0375330 | Msa1391260 | 0.824628 | 7.280930e-54 | -8.615850e-47 |
| Msa0375330 | Msa1395430 | 0.864127 | 1.520094e-64 | -8.615850e-47 |
| Msa0375330 | Msa1396200 | 0.804003 | 2.660597e-49 | -8.615850e-47 |
| Msa0375330 | Msa1404810 | 0.808311 | 3.296947e-50 | -8.615850e-47 |
| Msa0375330 | Msa1407810 | -0.811040 | 8.541147e-51 | -8.615850e-47 |
| Msa0375330 | Msa1408230 | 0.804851 | 1.771375e-49 | -8.615850e-47 |
| Msa0375330 | Msa1408390 | -0.808887 | 2.482940e-50 | -8.615850e-47 |
| Msa0375330 | Msa1412330 | 0.832132 | 1.125387e-55 | -8.615850e-47 |
| Msa0375330 | Msa1417370 | -0.830582 | 2.707334e-55 | -8.615850e-47 |
| Msa0375330 | Msa1417380 | -0.813456 | 2.535957e-51 | -8.615850e-47 |
| Msa0375330 | Msa1422860 | -0.850213 | 1.963450e-60 | -8.615850e-47 |
| Msa0375330 | Msa1428230 | 0.829545 | 4.848135e-55 | -8.615850e-47 |
| Msa0375330 | Msa1431510 | 0.824282 | 8.783766e-54 | -8.615850e-47 |
| Msa0375330 | Msa1432730 | 0.803716 | 3.052699e-49 | -8.615850e-47 |
| Msa0375330 | Msa1433360 | -0.829427 | 5.177960e-55 | -8.615850e-47 |
| Msa0375330 | Msa1433570 | -0.822534 | 2.250084e-53 | -8.615850e-47 |
| Msa0375330 | Msa1436620 | -0.805935 | 1.049849e-49 | -8.615850e-47 |
| Msa0375330 | Msa1437780 | -0.811623 | 6.381863e-51 | -8.615850e-47 |
| Msa0375330 | Msa1440140 | 0.819703 | 1.010184e-52 | -8.615850e-47 |
| Msa0375330 | Msa1440990 | 0.844122 | 9.191609e-59 | -8.615850e-47 |
| Msa0375330 | Msa1445530 | -0.812788 | 3.554485e-51 | -8.615850e-47 |
| Msa0375330 | Msa1445910 | 0.820008 | 8.603468e-53 | -8.615850e-47 |
| Msa0375330 | Msa1451910 | 0.832019 | 1.200383e-55 | -8.615850e-47 |
| Msa0375330 | Msa1454500 | -0.807384 | 5.190751e-50 | -8.615850e-47 |
| Msa0375330 | Msa1457390 | 0.801362 | 9.331543e-49 | -8.615850e-47 |
| Msa0375330 | Msa1457770 | -0.806394 | 8.404422e-50 | -8.615850e-47 |
| Msa0375330 | Msa1461370 | -0.809220 | 2.107275e-50 | -8.615850e-47 |
| Msa0241750 | Msa0375330 | -0.843911 | 1.047313e-58 | -8.615850e-47 |
| Msa0253230 | Msa0375330 | 0.800556 | 1.363466e-48 | -8.615850e-47 |
| Msa0260580 | Msa0375330 | 0.874985 | 4.400122e-68 | -8.615850e-47 |
| Msa0260640 | Msa0375330 | 0.864130 | 1.517348e-64 | -8.615850e-47 |
| Msa0260870 | Msa0375330 | 0.826628 | 2.443796e-54 | -8.615850e-47 |
| Msa0261350 | Msa0375330 | 0.822626 | 2.142452e-53 | -8.615850e-47 |
| Msa0261660 | Msa0375330 | 0.830565 | 2.733570e-55 | -8.615850e-47 |
| Msa0262350 | Msa0375330 | 0.826752 | 2.283317e-54 | -8.615850e-47 |
| Msa0263230 | Msa0375330 | -0.800189 | 1.619879e-48 | -8.615850e-47 |
| Msa0267450 | Msa0375330 | 0.804403 | 2.197218e-49 | -8.615850e-47 |
| Msa0267510 | Msa0375330 | 0.811944 | 5.433137e-51 | -8.615850e-47 |
| Msa0269170 | Msa0375330 | 0.833661 | 4.691460e-56 | -8.615850e-47 |
| Msa0269220 | Msa0375330 | 0.805769 | 1.137539e-49 | -8.615850e-47 |
| Msa0284800 | Msa0375330 | -0.813895 | 2.030289e-51 | -8.615850e-47 |
| Msa0293060 | Msa0375330 | 0.801127 | 1.042683e-48 | -8.615850e-47 |
| Msa0298670 | Msa0375330 | 0.832567 | 8.784242e-56 | -8.615850e-47 |
| Msa0299130 | Msa0375330 | 0.820467 | 6.754986e-53 | -8.615850e-47 |
| Msa0299530 | Msa0375330 | 0.852703 | 3.879680e-61 | -8.615850e-47 |
| Msa0300130 | Msa0375330 | 0.816776 | 4.644668e-52 | -8.615850e-47 |
| Msa0300840 | Msa0375330 | -0.809449 | 1.881720e-50 | -8.615850e-47 |
| Msa0308470 | Msa0375330 | -0.801283 | 9.685410e-49 | -8.615850e-47 |
| Msa0313900 | Msa0375330 | -0.840908 | 6.548802e-58 | -8.615850e-47 |
| Msa0326170 | Msa0375330 | 0.846033 | 2.800648e-59 | -8.615850e-47 |
| Msa0330520 | Msa0375330 | -0.823514 | 1.329879e-53 | -8.615850e-47 |
| Msa0338340 | Msa0375330 | -0.800614 | 1.326882e-48 | -8.615850e-47 |
| Msa0340700 | Msa0375330 | 0.826692 | 2.359051e-54 | -8.615850e-47 |
| Msa0355080 | Msa0375330 | 0.805541 | 1.270195e-49 | -8.615850e-47 |
| Msa0358300 | Msa0375330 | -0.816662 | 4.926108e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375330 | MtrunA17_Chr3g0121581 | 97.854 | 466 | 10 | 0 | 1 | 466 | 1 | 466 | 0.0 | 943 |
| Msa0375330 | MtrunA17_Chr5g0400751 | 25.258 | 388 | 257 | 9 | 77 | 453 | 56 | 421 | 1.12e-24 | 106 |
| Msa0375330 | MtrunA17_Chr7g0271361 | 24.603 | 252 | 161 | 9 | 74 | 307 | 48 | 288 | 1.73e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0375330 | AT1G08490.1 | 77.253 | 466 | 103 | 1 | 1 | 466 | 1 | 463 | 0.0 | 729 |
| Msa0375330 | AT5G65720.3 | 25.700 | 393 | 249 | 10 | 77 | 453 | 55 | 420 | 2.85e-21 | 96.7 |
| Msa0375330 | AT5G65720.1 | 25.700 | 393 | 249 | 10 | 77 | 453 | 55 | 420 | 2.85e-21 | 96.7 |
| Msa0375330 | AT5G65720.2 | 23.920 | 301 | 188 | 8 | 169 | 453 | 17 | 292 | 3.69e-13 | 70.9 |
Find 152 sgRNAs with CRISPR-Local
Find 376 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACTGATCTTGCAACATTTC+TGG | 0.138943 | 3_1:-75030098 | Msa0375330:CDS |
| GGCCCATAGATGCGAATATT+TGG | 0.178379 | 3_1:+75030184 | None:intergenic |
| CAACCCCTCCATCGGTATTT+AGG | 0.187810 | 3_1:-75029620 | Msa0375330:CDS |
| AACTCTTAGTTCTCCCTCTT+TGG | 0.194746 | 3_1:-75034165 | Msa0375330:CDS |
| TCCTTCAATTTGTCTATATC+TGG | 0.214976 | 3_1:+75033280 | None:intergenic |
| AATGATTTCAGATGTATATT+TGG | 0.234059 | 3_1:-75032184 | Msa0375330:CDS |
| TGGATTCTTATATGGTAAAA+TGG | 0.237622 | 3_1:-75032417 | Msa0375330:CDS |
| GTCCCAAATATTCGCATCTA+TGG | 0.258743 | 3_1:-75030187 | Msa0375330:CDS |
| GACATGTTATTCCACAATTA+AGG | 0.283706 | 3_1:+75029354 | None:intergenic |
| ACAGGCATTGGATTCTTATA+TGG | 0.290323 | 3_1:-75032425 | Msa0375330:CDS |
| TCAATCTAGTAGCTTATTCT+TGG | 0.296895 | 3_1:-75033776 | Msa0375330:CDS |
| AATTTATACTCGCAATAGTA+TGG | 0.307512 | 3_1:-75029245 | Msa0375330:three_prime_UTR |
| ACTCTTAGTTCTCCCTCTTT+GGG | 0.324312 | 3_1:-75034164 | Msa0375330:CDS |
| TTACTTCCTGGTGAAGTATA+GGG | 0.324627 | 3_1:+75034120 | None:intergenic |
| AACCCCTCCATCGGTATTTA+GGG | 0.335796 | 3_1:-75029619 | Msa0375330:CDS |
| AGTGATTGAACAGCAATAAC+TGG | 0.340667 | 3_1:+75034280 | None:intergenic |
| TTAGGATTGGTTCAATTGAT+AGG | 0.340879 | 3_1:-75029441 | Msa0375330:three_prime_UTR |
| GCAGCAATTGATTACTTGTC+TGG | 0.346961 | 3_1:-75031598 | Msa0375330:CDS |
| ATACTTCACCAGGAAGTAAA+TGG | 0.354665 | 3_1:-75034116 | Msa0375330:CDS |
| TCCATCGCCATTGGTTGGGT+TGG | 0.374008 | 3_1:-75034782 | Msa0375330:five_prime_UTR |
| TTTACTTCCTGGTGAAGTAT+AGG | 0.375419 | 3_1:+75034119 | None:intergenic |
| ATTGGTGAAGCAATTGGATT+AGG | 0.377119 | 3_1:-75031622 | Msa0375330:CDS |
| ATTGATTACTTGTCTGGGAT+TGG | 0.379311 | 3_1:-75031592 | Msa0375330:CDS |
| CCATCGCCATTGGTTGGGTT+GGG | 0.379491 | 3_1:-75034781 | Msa0375330:five_prime_UTR |
| ATGAGATCAGCAAGAGGAAT+TGG | 0.385117 | 3_1:+75029404 | None:intergenic |
| CCAGCTATTGGTGAAGCAAT+TGG | 0.385593 | 3_1:-75031628 | Msa0375330:CDS |
| CCTGGTGAAGTATAGGGAAA+TGG | 0.386768 | 3_1:+75034126 | None:intergenic |
| TAACTGGGGCTTGGAAGTTT+CGG | 0.386871 | 3_1:+75034296 | None:intergenic |
| CAGTGTGCAATATCTCTAAT+AGG | 0.390967 | 3_1:+75032653 | None:intergenic |
| TCTGACAAGTGATGTGGTTC+TGG | 0.397087 | 3_1:+75034256 | None:intergenic |
| GCAAGTATGCAACTGTTAAC+TGG | 0.400568 | 3_1:+75034751 | None:intergenic |
| GCCCATAGATGCGAATATTT+GGG | 0.403525 | 3_1:+75030185 | None:intergenic |
| CTGGTGAAGTATAGGGAAAT+GGG | 0.406014 | 3_1:+75034127 | None:intergenic |
| CTATATCTGGAATTTCATCT+TGG | 0.406188 | 3_1:+75033293 | None:intergenic |
| ATAGGAGAATTCCAAAATCT+TGG | 0.408694 | 3_1:+75034347 | None:intergenic |
| TTACAATTCAAACGTGCATC+GGG | 0.418015 | 3_1:-75034009 | Msa0375330:CDS |
| CAATCTAGTAGCTTATTCTT+GGG | 0.419995 | 3_1:-75033775 | Msa0375330:CDS |
| GGTTTCCATCGCCATTGGTT+GGG | 0.422201 | 3_1:-75034786 | Msa0375330:five_prime_UTR |
| GAGGCTGGAACACCAGCTAT+TGG | 0.422236 | 3_1:-75031640 | Msa0375330:CDS |
| TTGATTACTTGTCTGGGATT+GGG | 0.425333 | 3_1:-75031591 | Msa0375330:CDS |
| TTGACGGTTGATGCACGAAC+AGG | 0.429519 | 3_1:+75034206 | None:intergenic |
| TTGACTTCTTTCGAAGGGGC+TGG | 0.434464 | 3_1:+75030163 | None:intergenic |
| CACAAACCTGGACGGAGGTT+CGG | 0.435387 | 3_1:+75032146 | None:intergenic |
| TGCAACATTTCTGGACCAAC+AGG | 0.438009 | 3_1:-75030089 | Msa0375330:intron |
| AATGCCTTCACAACAGCTGC+AGG | 0.442651 | 3_1:+75034050 | None:intergenic |
| CTCGTTTGACTTCTTTCGAA+GGG | 0.444579 | 3_1:+75030158 | None:intergenic |
| TTACAGATGTGTGGGCCTAC+AGG | 0.456863 | 3_1:-75032443 | Msa0375330:intron |
| TTCAGCTACTGCTTGATTGA+CGG | 0.459909 | 3_1:+75034190 | None:intergenic |
| CCTTAGTGTTGTAGAAATAG+AGG | 0.461757 | 3_1:+75029573 | None:intergenic |
| AAGTATAGGGAAATGGGGTC+TGG | 0.471495 | 3_1:+75034133 | None:intergenic |
| CAAATGGTTTCCATCGCCAT+TGG | 0.471565 | 3_1:-75034791 | Msa0375330:five_prime_UTR |
| TAAATACCGATGGAGGGGTT+GGG | 0.473325 | 3_1:+75029622 | None:intergenic |
| CATGGAGTGGCAATCAGATC+AGG | 0.475274 | 3_1:-75029656 | Msa0375330:CDS |
| TTAAGGCCTACTGTAATTAG+TGG | 0.475990 | 3_1:+75029371 | None:intergenic |
| TCCAGATATAGACAAATTGA+AGG | 0.478567 | 3_1:-75033281 | Msa0375330:CDS |
| CTTCAATTCATTCAAGTAGT+CGG | 0.482994 | 3_1:-75029504 | Msa0375330:exon |
| GACTGTACATCAGTTAGGAT+TGG | 0.484410 | 3_1:-75029454 | Msa0375330:three_prime_UTR |
| AAAATGGAGGCATGGAAGAC+AGG | 0.487304 | 3_1:+75032390 | None:intergenic |
| ACCACATCACTTGTCAGACT+TGG | 0.489997 | 3_1:-75034251 | Msa0375330:CDS |
| GTGGAGAACAGCGGCGGCGA+GGG | 0.491164 | 3_1:+75034654 | None:intergenic |
| TCCATTGCTAACCACCCAAT+AGG | 0.493901 | 3_1:+75034329 | None:intergenic |
| GAACAGCAATAACTGGGGCT+TGG | 0.497888 | 3_1:+75034287 | None:intergenic |
| ATTTATGTGTTACAAAATGC+CGG | 0.499401 | 3_1:-75029319 | Msa0375330:three_prime_UTR |
| TGGTTTCCATCGCCATTGGT+TGG | 0.499995 | 3_1:-75034787 | Msa0375330:five_prime_UTR |
| TCCTATTGGGTGGTTAGCAA+TGG | 0.500044 | 3_1:-75034330 | Msa0375330:exon |
| CTCTTGCTGATCTCATAGAT+AGG | 0.500389 | 3_1:-75029397 | Msa0375330:three_prime_UTR |
| ACTCACCTCATACTCATGTA+TGG | 0.501136 | 3_1:+75031561 | None:intergenic |
| AGAAATGTTGCAAGATCAGT+AGG | 0.504435 | 3_1:+75030100 | None:intergenic |
| CAGCAATTGATTACTTGTCT+GGG | 0.508847 | 3_1:-75031597 | Msa0375330:CDS |
| TACCATACTAGATTTGAGGC+TGG | 0.512947 | 3_1:-75031655 | Msa0375330:intron |
| GCAAGCCATACATGAGTATG+AGG | 0.513803 | 3_1:-75031566 | Msa0375330:intron |
| CTGACAGAAGCCTTTCATAC+AGG | 0.515663 | 3_1:+75030209 | None:intergenic |
| ATGTGTGGGCCTACAGGCAT+TGG | 0.516246 | 3_1:-75032437 | Msa0375330:CDS |
| CATCATGTTTCAAATGTGCT+TGG | 0.517203 | 3_1:-75033223 | Msa0375330:intron |
| CTAAATACCGATGGAGGGGT+TGG | 0.521306 | 3_1:+75029621 | None:intergenic |
| CCATTTCCCTATACTTCACC+AGG | 0.523096 | 3_1:-75034126 | Msa0375330:CDS |
| GATATTGCACACTGGGCACA+TGG | 0.530497 | 3_1:-75032644 | Msa0375330:CDS |
| TCCCAAATATTCGCATCTAT+GGG | 0.531604 | 3_1:-75030186 | Msa0375330:CDS |
| CCAATTGCTTCACCAATAGC+TGG | 0.533136 | 3_1:+75031628 | None:intergenic |
| GTGATTGAACAGCAATAACT+GGG | 0.535039 | 3_1:+75034281 | None:intergenic |
| CACGTGTCGGATCAAGCAAA+TGG | 0.535997 | 3_1:-75034807 | Msa0375330:five_prime_UTR |
| GCACACTGGGCACATGGGGT+TGG | 0.536529 | 3_1:-75032638 | Msa0375330:CDS |
| TTATGATGATCAGAGCTTAG+TGG | 0.536844 | 3_1:+75034635 | None:intergenic |
| GAACAGGGAGATAAGTTAAA+CGG | 0.538325 | 3_1:+75034222 | None:intergenic |
| TGAACATCAACCACCATGTG+TGG | 0.542670 | 3_1:+75032581 | None:intergenic |
| GTTACAATTCAAACGTGCAT+CGG | 0.544500 | 3_1:-75034010 | Msa0375330:CDS |
| CTTATGCCGAACCTCCGTCC+AGG | 0.545005 | 3_1:-75032152 | Msa0375330:intron |
| ATCATAATTCAATTCATACT+AGG | 0.547474 | 3_1:-75034619 | Msa0375330:intron |
| GGAAATGGGGTCTGGTAGTG+TGG | 0.550619 | 3_1:+75034141 | None:intergenic |
| TGGGTACATACCTGTATGAA+AGG | 0.550622 | 3_1:-75030219 | Msa0375330:CDS |
| GCATTGCAAGACTATTATGA+AGG | 0.553126 | 3_1:-75034032 | Msa0375330:CDS |
| TATTAGAGATATTGCACACT+GGG | 0.555135 | 3_1:-75032651 | Msa0375330:CDS |
| CCTCTATTTCTACAACACTA+AGG | 0.555763 | 3_1:-75029573 | Msa0375330:CDS |
| TCTTGTTGCTTCTTCTCACA+AGG | 0.556164 | 3_1:-75032540 | Msa0375330:intron |
| AATCTAGTAGCTTATTCTTG+GGG | 0.557727 | 3_1:-75033774 | Msa0375330:CDS |
| CAACAAGAAAATCAGCATCA+AGG | 0.558160 | 3_1:+75032555 | None:intergenic |
| CCCAACCCAACCAATGGCGA+TGG | 0.558816 | 3_1:+75034781 | None:intergenic |
| AGAAGTTGACCGTGTCATGA+AGG | 0.561968 | 3_1:+75029525 | None:intergenic |
| CATTTGCTTGATCCGACACG+TGG | 0.567329 | 3_1:+75034808 | None:intergenic |
| GAAGTTGACCGTGTCATGAA+GGG | 0.567742 | 3_1:+75029526 | None:intergenic |
| TATGGTGTACTCTTTCACAC+TGG | 0.567865 | 3_1:-75029227 | Msa0375330:three_prime_UTR |
| GAAGCCTGCAGCTGTTGTGA+AGG | 0.567977 | 3_1:-75034054 | Msa0375330:CDS |
| GCTCGTTTGACTTCTTTCGA+AGG | 0.577103 | 3_1:+75030157 | None:intergenic |
| GTGTTGCAGCAAATGTATAC+CGG | 0.577878 | 3_1:+75029300 | None:intergenic |
| CTGGTAGTGTGGCCCAAAGA+GGG | 0.578324 | 3_1:+75034152 | None:intergenic |
| ATTACAGTAGGCCTTAATTG+TGG | 0.580967 | 3_1:-75029365 | Msa0375330:three_prime_UTR |
| TGACCCCTAAATACCGATGG+AGG | 0.582901 | 3_1:+75029615 | None:intergenic |
| TTTGGAATTCTCCTATTGGG+TGG | 0.589480 | 3_1:-75034340 | Msa0375330:five_prime_UTR |
| ACCCCTAAATACCGATGGAG+GGG | 0.591422 | 3_1:+75029617 | None:intergenic |
| CATGTGTGGAACACTCTGGC+AGG | 0.593828 | 3_1:+75032595 | None:intergenic |
| GGCTTGTCAAATTTAAAACA+AGG | 0.594239 | 3_1:-75033753 | Msa0375330:CDS |
| GACCCCTAAATACCGATGGA+GGG | 0.595603 | 3_1:+75029616 | None:intergenic |
| ATCACAGCGCAATTGTTCCA+TGG | 0.596198 | 3_1:-75033366 | Msa0375330:CDS |
| CTGCCAGAGTGTTCCACACA+TGG | 0.600132 | 3_1:-75032594 | Msa0375330:CDS |
| TCTGGTAGTGTGGCCCAAAG+AGG | 0.600966 | 3_1:+75034151 | None:intergenic |
| TGACCGTGTCATGAAGGGCA+TGG | 0.603142 | 3_1:+75029531 | None:intergenic |
| CATTGACCCCTAAATACCGA+TGG | 0.603227 | 3_1:+75029612 | None:intergenic |
| TATCCATGCCCTTCATGACA+CGG | 0.605173 | 3_1:-75029534 | Msa0375330:CDS |
| TCGTTTGACTTCTTTCGAAG+GGG | 0.606212 | 3_1:+75030159 | None:intergenic |
| AACCTGTCTTACAGATGTGT+GGG | 0.606697 | 3_1:-75032451 | Msa0375330:intron |
| GAACCTGTCTTACAGATGTG+TGG | 0.607400 | 3_1:-75032452 | Msa0375330:intron |
| ATTGTGCCCAACCCCTCCAT+CGG | 0.607814 | 3_1:-75029628 | Msa0375330:CDS |
| AGTGGAGAACAGCGGCGGCG+AGG | 0.608765 | 3_1:+75034653 | None:intergenic |
| AAAGAGGGAGAACTAAGAGT+TGG | 0.613517 | 3_1:+75034167 | None:intergenic |
| TATTGCACACTGGGCACATG+GGG | 0.615050 | 3_1:-75032642 | Msa0375330:CDS |
| CCACCATGTGTGGAACACTC+TGG | 0.619780 | 3_1:+75032591 | None:intergenic |
| AGGCATCCACTAATTACAGT+AGG | 0.623139 | 3_1:-75029377 | Msa0375330:three_prime_UTR |
| TGACGGTTGATGCACGAACA+GGG | 0.628972 | 3_1:+75034207 | None:intergenic |
| GATGGAGGGGTTGGGCACAA+TGG | 0.630626 | 3_1:+75029630 | None:intergenic |
| AAATTTAAAACAAGGAGATG+AGG | 0.633993 | 3_1:-75033745 | Msa0375330:intron |
| TATTTATGGATGTAGTGCAA+AGG | 0.635359 | 3_1:-75033898 | Msa0375330:intron |
| CTATTAGAGATATTGCACAC+TGG | 0.643145 | 3_1:-75032652 | Msa0375330:CDS |
| ATATTGCACACTGGGCACAT+GGG | 0.643244 | 3_1:-75032643 | Msa0375330:CDS |
| GCCAAGTCTGACAAGTGATG+TGG | 0.644516 | 3_1:+75034250 | None:intergenic |
| AGCTGATTCATACTCGTCTG+TGG | 0.647061 | 3_1:+75033875 | None:intergenic |
| ACGAGTATGAATCAGCTAGA+CGG | 0.649988 | 3_1:-75033869 | Msa0375330:CDS |
| CTATCTATGAGATCAGCAAG+AGG | 0.652182 | 3_1:+75029398 | None:intergenic |
| AGCTTAGTGGAGAACAGCGG+CGG | 0.652892 | 3_1:+75034648 | None:intergenic |
| ATCGGGGCATACATTACTTG+AGG | 0.654297 | 3_1:-75033992 | Msa0375330:intron |
| TGGTGAAGTATAGGGAAATG+GGG | 0.664059 | 3_1:+75034128 | None:intergenic |
| TATAAGAATCCAATGCCTGT+AGG | 0.671673 | 3_1:+75032428 | None:intergenic |
| GTATGAATCAGCTAGACGGA+AGG | 0.672338 | 3_1:-75033865 | Msa0375330:CDS |
| ACCCCTCCATCGGTATTTAG+GGG | 0.674227 | 3_1:-75029618 | Msa0375330:CDS |
| CTATTTCTACAACACTAAGG+AGG | 0.678567 | 3_1:-75029570 | Msa0375330:CDS |
| GAAATGTTGCAAGATCAGTA+GGG | 0.688737 | 3_1:+75030101 | None:intergenic |
| ATGGAGGCATGGAAGACAGG+AGG | 0.692069 | 3_1:+75032393 | None:intergenic |
| CCAGAGTGTTCCACACATGG+TGG | 0.696122 | 3_1:-75032591 | Msa0375330:CDS |
| AAGTTCACAAACCTGGACGG+AGG | 0.708907 | 3_1:+75032141 | None:intergenic |
| TACAATTCAAACGTGCATCG+GGG | 0.710508 | 3_1:-75034008 | Msa0375330:CDS |
| CAGAGCTTAGTGGAGAACAG+CGG | 0.747768 | 3_1:+75034645 | None:intergenic |
| CAGGGAGATAAGTTAAACGG+CGG | 0.749242 | 3_1:+75034225 | None:intergenic |
| TGATTGAACAGCAATAACTG+GGG | 0.771247 | 3_1:+75034282 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATTTTTATTTAATTCCATTT+TGG | - | chr3_1:75029463-75029482 | Msa0375330:three_prime_UTR | 10.0% |
| !!! | TAAACAATTTTTTATGAAAA+AGG | - | chr3_1:75034049-75034068 | Msa0375330:CDS | 10.0% |
| !!! | TTATTCATAAACTTTTATAT+AGG | - | chr3_1:75034134-75034153 | Msa0375330:CDS | 10.0% |
| !! | AATAAATAGCCAATAAAAAT+TGG | - | chr3_1:75029200-75029219 | Msa0375330:three_prime_UTR | 15.0% |
| !!! | ATTATTGTGTTTGTTAAATT+TGG | - | chr3_1:75030080-75030099 | Msa0375330:intron | 15.0% |
| !! | TCATGTTTAAAAATTTAGAT+GGG | + | chr3_1:75030423-75030442 | None:intergenic | 15.0% |
| !! | ATCATGTTTAAAAATTTAGA+TGG | + | chr3_1:75030424-75030443 | None:intergenic | 15.0% |
| !! | TATAATAACTTACCTAAAAA+TGG | + | chr3_1:75031673-75031692 | None:intergenic | 15.0% |
| !! | AAAACAAAATCTTATTAACA+TGG | + | chr3_1:75031786-75031805 | None:intergenic | 15.0% |
| !!! | TGTATATCATTTTTAAGATA+AGG | + | chr3_1:75031951-75031970 | None:intergenic | 15.0% |
| !! | ATCTTAAAAATGATATACAT+TGG | - | chr3_1:75031952-75031971 | Msa0375330:intron | 15.0% |
| !! | GGTTATATTAAATTTAGAAA+AGG | + | chr3_1:75032255-75032274 | None:intergenic | 15.0% |
| !! | ATCATAATTCAATTCATACT+AGG | - | chr3_1:75029425-75029444 | Msa0375330:three_prime_UTR | 20.0% |
| !!! | TGTTAAATTTGGAATTACAT+TGG | - | chr3_1:75030091-75030110 | Msa0375330:CDS | 20.0% |
| !! | TTTATGTGCACAATTATTTA+TGG | - | chr3_1:75030132-75030151 | Msa0375330:CDS | 20.0% |
| !! | CATGTTTAAAAATTTAGATG+GGG | + | chr3_1:75030422-75030441 | None:intergenic | 20.0% |
| !!! | TTGTGCATATTTTTAAGATT+CGG | - | chr3_1:75030450-75030469 | Msa0375330:intron | 20.0% |
| !! | ATCAAATGTGATATTGAAAT+AGG | - | chr3_1:75030498-75030517 | Msa0375330:intron | 20.0% |
| !!! | TTTTACATGAGCATATTTAT+TGG | + | chr3_1:75030611-75030630 | None:intergenic | 20.0% |
| !!! | TTTATAGGTTTTGACATTAA+CGG | - | chr3_1:75030925-75030944 | Msa0375330:intron | 20.0% |
| !! | ATTTCCAATATTCAACTATA+AGG | - | chr3_1:75031089-75031108 | Msa0375330:intron | 20.0% |
| !! | TTTCCAATATTCAACTATAA+GGG | - | chr3_1:75031090-75031109 | Msa0375330:intron | 20.0% |
| !!! | ACCAAGTTTAAATGTTTTTA+GGG | + | chr3_1:75031198-75031217 | None:intergenic | 20.0% |
| !! | TTTAGGTAAGTTATTATACA+CGG | - | chr3_1:75031675-75031694 | Msa0375330:intron | 20.0% |
| !! | AATGATTTCAGATGTATATT+TGG | - | chr3_1:75031860-75031879 | Msa0375330:intron | 20.0% |
| !! | GTATCTTATTATTATATCTG+AGG | - | chr3_1:75032360-75032379 | Msa0375330:intron | 20.0% |
| !! | ATTATAACGATAACATTGAA+GGG | + | chr3_1:75033418-75033437 | None:intergenic | 20.0% |
| !! | AATTATAACGATAACATTGA+AGG | + | chr3_1:75033419-75033438 | None:intergenic | 20.0% |
| !! | AAAATCATTAATTTAGCTAG+TGG | + | chr3_1:75033446-75033465 | None:intergenic | 20.0% |
| !!! | ATTTCTCTAGAATAACTTAA+AGG | + | chr3_1:75034104-75034123 | None:intergenic | 20.0% |
| !!! | TTTGTAACACATAAATTTTC+AGG | + | chr3_1:75034721-75034740 | None:intergenic | 20.0% |
| !! | AAAGTCGAACCAATTTTTAT+TGG | + | chr3_1:75029212-75029231 | None:intergenic | 25.0% |
| !! | TCAATGAATTTAGAGTAGAA+AGG | + | chr3_1:75029496-75029515 | None:intergenic | 25.0% |
| !!! | TTTTTTCTTAGCCAAGATTT+TGG | - | chr3_1:75029686-75029705 | Msa0375330:intron | 25.0% |
| !! | TTGGAATTACATTGGTAATT+TGG | - | chr3_1:75030099-75030118 | Msa0375330:CDS | 25.0% |
| ! | TAATTGTGCACATAAACATT+TGG | + | chr3_1:75030128-75030147 | None:intergenic | 25.0% |
| !! | AAATTTAAAACAAGGAGATG+AGG | - | chr3_1:75030299-75030318 | Msa0375330:intron | 25.0% |
| ! | AAGTTCTATTCCTTTATGTT+TGG | - | chr3_1:75030572-75030591 | Msa0375330:intron | 25.0% |
| ! | TAATGACAATCCAAACATAA+AGG | + | chr3_1:75030585-75030604 | None:intergenic | 25.0% |
| ! | TTACATACACTCATATAAAG+AGG | - | chr3_1:75031066-75031085 | Msa0375330:intron | 25.0% |
| ! | ACCCTAAAAACATTTAAACT+TGG | - | chr3_1:75031194-75031213 | Msa0375330:intron | 25.0% |
| !! | CACCAAGTTTAAATGTTTTT+AGG | + | chr3_1:75031199-75031218 | None:intergenic | 25.0% |
| ! | AAAAACCATTGAAACAATTG+GGG | + | chr3_1:75031254-75031273 | None:intergenic | 25.0% |
| ! | GAAAAACCATTGAAACAATT+GGG | + | chr3_1:75031255-75031274 | None:intergenic | 25.0% |
| ! | TGAAAAACCATTGAAACAAT+TGG | + | chr3_1:75031256-75031275 | None:intergenic | 25.0% |
| ! | TGGATTCTTATATGGTAAAA+TGG | - | chr3_1:75031627-75031646 | Msa0375330:CDS | 25.0% |
| ! | AATAACTTACCTAAAAATGG+AGG | + | chr3_1:75031670-75031689 | None:intergenic | 25.0% |
| ! | ACATGAACAACTAGTTAAAA+TGG | - | chr3_1:75031723-75031742 | Msa0375330:intron | 25.0% |
| ! | AGAAAAAATCCTGTTTGTTT+AGG | - | chr3_1:75031758-75031777 | Msa0375330:intron | 25.0% |
| !! | TTTTGTAGCTAATACATTTC+CGG | - | chr3_1:75031802-75031821 | Msa0375330:intron | 25.0% |
| !! | AAAAATGATATACATTGGCT+TGG | - | chr3_1:75031957-75031976 | Msa0375330:intron | 25.0% |
| !!! | AAAATGATATACATTGGCTT+GGG | - | chr3_1:75031958-75031977 | Msa0375330:intron | 25.0% |
| !!! | TTTTGGTTATAGAATCCTAT+GGG | + | chr3_1:75032130-75032149 | None:intergenic | 25.0% |
| !!! | TTTTTGGTTATAGAATCCTA+TGG | + | chr3_1:75032131-75032150 | None:intergenic | 25.0% |
| !!! | TGGTAGATCGAATAATTTTT+TGG | + | chr3_1:75032147-75032166 | None:intergenic | 25.0% |
| ! | ATTGACAACGATCATTTAAA+TGG | + | chr3_1:75032167-75032186 | None:intergenic | 25.0% |
| ! | GATACAATACAAGTAATTGA+TGG | + | chr3_1:75032345-75032364 | None:intergenic | 25.0% |
| !! | ATTTTACCATACTAGATTTG+AGG | - | chr3_1:75032385-75032404 | Msa0375330:intron | 25.0% |
| ! | TTTATAGTCAATAAGACTGA+AGG | + | chr3_1:75032512-75032531 | None:intergenic | 25.0% |
| ! | AAGAGGATAGTAAAGTAAAT+GGG | + | chr3_1:75032601-75032620 | None:intergenic | 25.0% |
| ! | AAATCAACTAAATCATAACG+AGG | + | chr3_1:75032720-75032739 | None:intergenic | 25.0% |
| ! | AAATACAAGAATAAACCACA+GGG | + | chr3_1:75032925-75032944 | None:intergenic | 25.0% |
| ! | TAAATACAAGAATAAACCAC+AGG | + | chr3_1:75032926-75032945 | None:intergenic | 25.0% |
| ! | AAGATTCACTTCTAATCATT+TGG | - | chr3_1:75032976-75032995 | Msa0375330:intron | 25.0% |
| ! | AGATTCACTTCTAATCATTT+GGG | - | chr3_1:75032977-75032996 | Msa0375330:intron | 25.0% |
| !! | AGCTTAACTACAAGTTATTT+TGG | + | chr3_1:75033150-75033169 | None:intergenic | 25.0% |
| ! | AATATACATTAATGAGGTTG+AGG | + | chr3_1:75033368-75033387 | None:intergenic | 25.0% |
| !! | GCTTTGAATATACATTAATG+AGG | + | chr3_1:75033374-75033393 | None:intergenic | 25.0% |
| ! | TTATTAGGTGAAAACAATGT+AGG | - | chr3_1:75033594-75033613 | Msa0375330:intron | 25.0% |
| !! | TATGACATCCAAATTTTCAA+AGG | - | chr3_1:75033796-75033815 | Msa0375330:CDS | 25.0% |
| ! | AATAAGTTAAAAACAACCCA+TGG | - | chr3_1:75034157-75034176 | Msa0375330:CDS | 25.0% |
| ! | TAATTGATTACAGACTAAGA+AGG | + | chr3_1:75034273-75034292 | None:intergenic | 25.0% |
| !! | ACTAAATTGCCCAAATTTTT+CGG | - | chr3_1:75034292-75034311 | Msa0375330:CDS | 25.0% |
| ! | CAATTACTACCGAAAAATTT+GGG | + | chr3_1:75034304-75034323 | None:intergenic | 25.0% |
| ! | ATTTATGTGTTACAAAATGC+CGG | - | chr3_1:75034725-75034744 | Msa0375330:five_prime_UTR | 25.0% |
| ! | AATTTATACTCGCAATAGTA+TGG | - | chr3_1:75034799-75034818 | Msa0375330:five_prime_UTR | 25.0% |
| ! | AATTTAGAGTAGAAAGGAGA+GGG | + | chr3_1:75029490-75029509 | None:intergenic | 30.0% |
| GAAGAGAAACATTAAAGAGT+CGG | + | chr3_1:75029648-75029667 | None:intergenic | 30.0% | |
| ATAGGAGAATTCCAAAATCT+TGG | + | chr3_1:75029700-75029719 | None:intergenic | 30.0% | |
| !!! | AGATTTTGGAATTCTCCTAT+TGG | - | chr3_1:75029700-75029719 | Msa0375330:intron | 30.0% |
| !!! | GATTTTGGAATTCTCCTATT+GGG | - | chr3_1:75029701-75029720 | Msa0375330:intron | 30.0% |
| ! | GAATTACATTGGTAATTTGG+AGG | - | chr3_1:75030102-75030121 | Msa0375330:CDS | 30.0% |
| TATTTATGGATGTAGTGCAA+AGG | - | chr3_1:75030146-75030165 | Msa0375330:CDS | 30.0% | |
| TCAATCTAGTAGCTTATTCT+TGG | - | chr3_1:75030268-75030287 | Msa0375330:intron | 30.0% | |
| CAATCTAGTAGCTTATTCTT+GGG | - | chr3_1:75030269-75030288 | Msa0375330:intron | 30.0% | |
| AATCTAGTAGCTTATTCTTG+GGG | - | chr3_1:75030270-75030289 | Msa0375330:intron | 30.0% | |
| ! | GGCTTGTCAAATTTAAAACA+AGG | - | chr3_1:75030291-75030310 | Msa0375330:intron | 30.0% |
| !!! | ATGTTTGGATTAGCGTATTT+TGG | - | chr3_1:75030365-75030384 | Msa0375330:intron | 30.0% |
| !! | GAAATAGGAGTTTTAATACC+AGG | - | chr3_1:75030513-75030532 | Msa0375330:intron | 30.0% |
| TAAAGGAATAGAACTTCAAC+CGG | + | chr3_1:75030568-75030587 | None:intergenic | 30.0% | |
| CAATTAGTAGCTCAAAAAGT+TGG | - | chr3_1:75030701-75030720 | Msa0375330:intron | 30.0% | |
| ! | CTATATCTGGAATTTCATCT+TGG | + | chr3_1:75030754-75030773 | None:intergenic | 30.0% |
| TCCAGATATAGACAAATTGA+AGG | - | chr3_1:75030763-75030782 | Msa0375330:intron | 30.0% | |
| TCCTTCAATTTGTCTATATC+TGG | + | chr3_1:75030767-75030786 | None:intergenic | 30.0% | |
| ! | GGATTGTACATTTTTGTGAA+TGG | - | chr3_1:75030858-75030877 | Msa0375330:intron | 30.0% |
| AGTCCCTTATAGTTGAATAT+TGG | + | chr3_1:75031096-75031115 | None:intergenic | 30.0% | |
| AAAACCATTGAAACAATTGG+GGG | + | chr3_1:75031253-75031272 | None:intergenic | 30.0% | |
| CTATCATTGTGGAAAATAAG+AGG | + | chr3_1:75031287-75031306 | None:intergenic | 30.0% | |
| !! | GAGTAAAAGTACTATCATTG+TGG | + | chr3_1:75031298-75031317 | None:intergenic | 30.0% |
| TATTAGAGATATTGCACACT+GGG | - | chr3_1:75031393-75031412 | Msa0375330:intron | 30.0% | |
| ACTAGTTGTTCATGTTTGAT+AGG | + | chr3_1:75031718-75031737 | None:intergenic | 30.0% | |
| GAAAAAAAAGTTCACAAACC+TGG | + | chr3_1:75031913-75031932 | None:intergenic | 30.0% | |
| TTTGGTTATAGAATCCTATG+GGG | + | chr3_1:75032129-75032148 | None:intergenic | 30.0% | |
| AGAGTTTCCATTTCTTATCT+TGG | - | chr3_1:75032206-75032225 | Msa0375330:intron | 30.0% | |
| GAGTTTCCATTTCTTATCTT+GGG | - | chr3_1:75032207-75032226 | Msa0375330:intron | 30.0% | |
| AAATGACTGTAGGTTATGAA+TGG | + | chr3_1:75032276-75032295 | None:intergenic | 30.0% | |
| AGAAAACTAGAGTAATTCAC+AGG | - | chr3_1:75032531-75032550 | Msa0375330:intron | 30.0% | |
| GAAGAGGATAGTAAAGTAAA+TGG | + | chr3_1:75032602-75032621 | None:intergenic | 30.0% | |
| !! | GGTATCATCTTTTGAAAATC+TGG | - | chr3_1:75032791-75032810 | Msa0375330:intron | 30.0% |
| CATTAGATGGTTAAGCAAAT+TGG | + | chr3_1:75032821-75032840 | None:intergenic | 30.0% | |
| !! | TTGGCTTTATTGTCATTAGA+TGG | + | chr3_1:75032834-75032853 | None:intergenic | 30.0% |
| CAATCAATACATTAAGTGCT+TGG | + | chr3_1:75032853-75032872 | None:intergenic | 30.0% | |
| CTGATCAAGTTAAACATTGT+CGG | + | chr3_1:75033205-75033224 | None:intergenic | 30.0% | |
| GAAGAAGTAAAACAACAATC+AGG | + | chr3_1:75033302-75033321 | None:intergenic | 30.0% | |
| ! | CAAAATCAGTTTTCATACAG+AGG | - | chr3_1:75033524-75033543 | Msa0375330:intron | 30.0% |
| CTAACACTCACTTTCTTATT+AGG | - | chr3_1:75033579-75033598 | Msa0375330:intron | 30.0% | |
| TTGTTGGGTTAAATCAATGT+AGG | + | chr3_1:75033660-75033679 | None:intergenic | 30.0% | |
| CTAACACTTATTCTCTTGTT+GGG | + | chr3_1:75033675-75033694 | None:intergenic | 30.0% | |
| TCTAACACTTATTCTCTTGT+TGG | + | chr3_1:75033676-75033695 | None:intergenic | 30.0% | |
| TATTTCATCTTCTTACCTGT+TGG | + | chr3_1:75033973-75033992 | None:intergenic | 30.0% | |
| AACAAGAAAATGCATATAGC+TGG | + | chr3_1:75034002-75034021 | None:intergenic | 30.0% | |
| AGTGTCTATGTCATGAAATA+AGG | - | chr3_1:75034226-75034245 | Msa0375330:CDS | 30.0% | |
| CCAATTACTACCGAAAAATT+TGG | + | chr3_1:75034305-75034324 | None:intergenic | 30.0% | |
| !! | CCAAATTTTTCGGTAGTAAT+TGG | - | chr3_1:75034302-75034321 | Msa0375330:CDS | 30.0% |
| ACATCATCGAAATTCAAGAA+AGG | + | chr3_1:75034357-75034376 | None:intergenic | 30.0% | |
| ! | ATGATGTATCATTTTCAGCA+TGG | - | chr3_1:75034370-75034389 | Msa0375330:five_prime_UTR | 30.0% |
| CTTCAATTCATTCAAGTAGT+CGG | - | chr3_1:75034540-75034559 | Msa0375330:intron | 30.0% | |
| !!! | ATTTTGACTGTACATCAGTT+AGG | - | chr3_1:75034585-75034604 | Msa0375330:intron | 30.0% |
| !! | TTAGGATTGGTTCAATTGAT+AGG | - | chr3_1:75034603-75034622 | Msa0375330:intron | 30.0% |
| GACATGTTATTCCACAATTA+AGG | + | chr3_1:75034693-75034712 | None:intergenic | 30.0% | |
| !! | GTAACACATAAATTTTCAGG+AGG | + | chr3_1:75034718-75034737 | None:intergenic | 30.0% |
| TTATGATGATCAGAGCTTAG+TGG | + | chr3_1:75029412-75029431 | None:intergenic | 35.0% | |
| ! | GAATTTAGAGTAGAAAGGAG+AGG | + | chr3_1:75029491-75029510 | None:intergenic | 35.0% |
| !! | ATAAAAGTTTTGACCAGGGT+GGG | + | chr3_1:75029540-75029559 | None:intergenic | 35.0% |
| !! | AGCCATAAAAGTTTTGACCA+GGG | + | chr3_1:75029544-75029563 | None:intergenic | 35.0% |
| !! | TAGCCATAAAAGTTTTGACC+AGG | + | chr3_1:75029545-75029564 | None:intergenic | 35.0% |
| AATCATGCAACAAACACCAT+CGG | + | chr3_1:75029601-75029620 | None:intergenic | 35.0% | |
| TGATTGAACAGCAATAACTG+GGG | + | chr3_1:75029765-75029784 | None:intergenic | 35.0% | |
| GTGATTGAACAGCAATAACT+GGG | + | chr3_1:75029766-75029785 | None:intergenic | 35.0% | |
| AGTGATTGAACAGCAATAAC+TGG | + | chr3_1:75029767-75029786 | None:intergenic | 35.0% | |
| GAACAGGGAGATAAGTTAAA+CGG | + | chr3_1:75029825-75029844 | None:intergenic | 35.0% | |
| TTACTTCCTGGTGAAGTATA+GGG | + | chr3_1:75029927-75029946 | None:intergenic | 35.0% | |
| TTTACTTCCTGGTGAAGTAT+AGG | + | chr3_1:75029928-75029947 | None:intergenic | 35.0% | |
| ATACTTCACCAGGAAGTAAA+TGG | - | chr3_1:75029928-75029947 | Msa0375330:intron | 35.0% | |
| GCATTGCAAGACTATTATGA+AGG | - | chr3_1:75030012-75030031 | Msa0375330:intron | 35.0% | |
| GTTACAATTCAAACGTGCAT+CGG | - | chr3_1:75030034-75030053 | Msa0375330:intron | 35.0% | |
| TTACAATTCAAACGTGCATC+GGG | - | chr3_1:75030035-75030054 | Msa0375330:intron | 35.0% | |
| !! | ATTTCAACTTGCTGCATGTT+TGG | - | chr3_1:75030350-75030369 | Msa0375330:intron | 35.0% |
| !! | TTAAGATTCGGAGAGTGTTA+AGG | - | chr3_1:75030462-75030481 | Msa0375330:intron | 35.0% |
| !! | ATAGGAGTTTTAATACCAGG+AGG | - | chr3_1:75030516-75030535 | Msa0375330:intron | 35.0% |
| AAAGGAATAGAACTTCAACC+GGG | + | chr3_1:75030567-75030586 | None:intergenic | 35.0% | |
| ! | TTTTGAGCTACTAATTGCCA+TGG | + | chr3_1:75030698-75030717 | None:intergenic | 35.0% |
| CATCATGTTTCAAATGTGCT+TGG | - | chr3_1:75030821-75030840 | Msa0375330:intron | 35.0% | |
| ! | TTTTGACATTAACGGTCTTC+TGG | - | chr3_1:75030933-75030952 | Msa0375330:intron | 35.0% |
| GAAAGTTTCTGTATTCGTAC+TGG | + | chr3_1:75031009-75031028 | None:intergenic | 35.0% | |
| ! | CATGTTTGCTAAGTACTAGT+CGG | + | chr3_1:75031137-75031156 | None:intergenic | 35.0% |
| TATTGGGTCTCAATATGCAT+AGG | + | chr3_1:75031165-75031184 | None:intergenic | 35.0% | |
| !!! | AATGTTTTTAGGGTCACGTT+GGG | + | chr3_1:75031188-75031207 | None:intergenic | 35.0% |
| !!! | AAATGTTTTTAGGGTCACGT+TGG | + | chr3_1:75031189-75031208 | None:intergenic | 35.0% |
| CAGTGTGCAATATCTCTAAT+AGG | + | chr3_1:75031394-75031413 | None:intergenic | 35.0% | |
| CTATTAGAGATATTGCACAC+TGG | - | chr3_1:75031392-75031411 | Msa0375330:intron | 35.0% | |
| CAACAAGAAAATCAGCATCA+AGG | + | chr3_1:75031492-75031511 | None:intergenic | 35.0% | |
| TATAAGAATCCAATGCCTGT+AGG | + | chr3_1:75031619-75031638 | None:intergenic | 35.0% | |
| !! | ACAGGCATTGGATTCTTATA+TGG | - | chr3_1:75031619-75031638 | Msa0375330:CDS | 35.0% |
| AAAAAGTTCACAAACCTGGA+CGG | + | chr3_1:75031909-75031928 | None:intergenic | 35.0% | |
| !! | ATTGGTATTTTGAACCCCAT+AGG | - | chr3_1:75032112-75032131 | Msa0375330:intron | 35.0% |
| ATCAGTCCCAAGATAAGAAA+TGG | + | chr3_1:75032216-75032235 | None:intergenic | 35.0% | |
| AAAAAATTAGCACTGTGAGG+CGG | + | chr3_1:75032303-75032322 | None:intergenic | 35.0% | |
| AGCAAAAAATTAGCACTGTG+AGG | + | chr3_1:75032306-75032325 | None:intergenic | 35.0% | |
| ATTGGTGAAGCAATTGGATT+AGG | - | chr3_1:75032422-75032441 | Msa0375330:CDS | 35.0% | |
| CAGCAATTGATTACTTGTCT+GGG | - | chr3_1:75032447-75032466 | Msa0375330:intron | 35.0% | |
| ! | ATTGATTACTTGTCTGGGAT+TGG | - | chr3_1:75032452-75032471 | Msa0375330:intron | 35.0% |
| ! | TTGATTACTTGTCTGGGATT+GGG | - | chr3_1:75032453-75032472 | Msa0375330:intron | 35.0% |
| TACTTTACTATCCTCTTCTG+TGG | - | chr3_1:75032604-75032623 | Msa0375330:CDS | 35.0% | |
| !! | TGAAGCTTTTTCTCCTTCAT+GGG | - | chr3_1:75032770-75032789 | Msa0375330:intron | 35.0% |
| TCAAAAGATGATACCCATGA+AGG | + | chr3_1:75032786-75032805 | None:intergenic | 35.0% | |
| CAACAATCAGGATGACAAAA+TGG | + | chr3_1:75033290-75033309 | None:intergenic | 35.0% | |
| ! | TTTTCATACAGAGGATTGCT+AGG | - | chr3_1:75033533-75033552 | Msa0375330:intron | 35.0% |
| TAGGTCCTACTACTTTATGT+GGG | - | chr3_1:75033613-75033632 | Msa0375330:intron | 35.0% | |
| ! | AAATTTTCAAAGGTCGAGCT+GGG | - | chr3_1:75033806-75033825 | Msa0375330:CDS | 35.0% |
| TCCCAAATATTCGCATCTAT+GGG | - | chr3_1:75033858-75033877 | Msa0375330:CDS | 35.0% | |
| GAAATGTTGCAAGATCAGTA+GGG | + | chr3_1:75033946-75033965 | None:intergenic | 35.0% | |
| AGAAATGTTGCAAGATCAGT+AGG | + | chr3_1:75033947-75033966 | None:intergenic | 35.0% | |
| TACTGATCTTGCAACATTTC+TGG | - | chr3_1:75033946-75033965 | Msa0375330:intron | 35.0% | |
| ATTGGAATAGCTGTTGAACT+TGG | - | chr3_1:75034320-75034339 | Msa0375330:exon | 35.0% | |
| CCTTAGTGTTGTAGAAATAG+AGG | + | chr3_1:75034474-75034493 | None:intergenic | 35.0% | |
| !! | CCTCTATTTCTACAACACTA+AGG | - | chr3_1:75034471-75034490 | Msa0375330:intron | 35.0% |
| !! | CTATTTCTACAACACTAAGG+AGG | - | chr3_1:75034474-75034493 | Msa0375330:intron | 35.0% |
| TTAAGGCCTACTGTAATTAG+TGG | + | chr3_1:75034676-75034695 | None:intergenic | 35.0% | |
| ATTACAGTAGGCCTTAATTG+TGG | - | chr3_1:75034679-75034698 | Msa0375330:five_prime_UTR | 35.0% | |
| ! | TTTTAACCCAACCCAACCAA+TGG | + | chr3_1:75029272-75029291 | None:intergenic | 40.0% |
| GCAAGTATGCAACTGTTAAC+TGG | + | chr3_1:75029296-75029315 | None:intergenic | 40.0% | |
| !! | CATAAAAGTTTTGACCAGGG+TGG | + | chr3_1:75029541-75029560 | None:intergenic | 40.0% |
| ! | CACCCTGGTCAAAACTTTTA+TGG | - | chr3_1:75029539-75029558 | Msa0375330:CDS | 40.0% |
| CAATTCACTGCTGCAAGTTA+AGG | + | chr3_1:75029572-75029591 | None:intergenic | 40.0% | |
| CAGTGAATTGAATTTCCCGA+TGG | - | chr3_1:75029582-75029601 | Msa0375330:CDS | 40.0% | |
| ATCATGCAACAAACACCATC+GGG | + | chr3_1:75029600-75029619 | None:intergenic | 40.0% | |
| ! | TTTGGAATTCTCCTATTGGG+TGG | - | chr3_1:75029704-75029723 | Msa0375330:intron | 40.0% |
| TTCAGCTACTGCTTGATTGA+CGG | + | chr3_1:75029857-75029876 | None:intergenic | 40.0% | |
| AAAGAGGGAGAACTAAGAGT+TGG | + | chr3_1:75029880-75029899 | None:intergenic | 40.0% | |
| ! | AACTCTTAGTTCTCCCTCTT+TGG | - | chr3_1:75029879-75029898 | Msa0375330:intron | 40.0% |
| ! | ACTCTTAGTTCTCCCTCTTT+GGG | - | chr3_1:75029880-75029899 | Msa0375330:intron | 40.0% |
| TGGTGAAGTATAGGGAAATG+GGG | + | chr3_1:75029919-75029938 | None:intergenic | 40.0% | |
| CTGGTGAAGTATAGGGAAAT+GGG | + | chr3_1:75029920-75029939 | None:intergenic | 40.0% | |
| !! | GTTTTGAGCCATTTACTTCC+TGG | + | chr3_1:75029939-75029958 | None:intergenic | 40.0% |
| TACAATTCAAACGTGCATCG+GGG | - | chr3_1:75030036-75030055 | Msa0375330:intron | 40.0% | |
| ACGAGTATGAATCAGCTAGA+CGG | - | chr3_1:75030175-75030194 | Msa0375330:CDS | 40.0% | |
| TTAATACCAGGAGGAGACAT+TGG | - | chr3_1:75030525-75030544 | Msa0375330:intron | 40.0% | |
| TAATACCAGGAGGAGACATT+GGG | - | chr3_1:75030526-75030545 | Msa0375330:intron | 40.0% | |
| ACCTATAAAGTTAACCCAGC+AGG | + | chr3_1:75030914-75030933 | None:intergenic | 40.0% | |
| TTGAATCAACGTTGCATCGA+GGG | - | chr3_1:75030974-75030993 | Msa0375330:intron | 40.0% | |
| CAGAAGCTACAGAAAAGCAA+AGG | + | chr3_1:75031366-75031385 | None:intergenic | 40.0% | |
| ! | TCTTGTTGCTTCTTCTCACA+AGG | - | chr3_1:75031504-75031523 | Msa0375330:intron | 40.0% |
| !! | AGTAACTTGTTACACTGGTC+TGG | + | chr3_1:75031572-75031591 | None:intergenic | 40.0% |
| !! | GGTTCAGTAACTTGTTACAC+TGG | + | chr3_1:75031577-75031596 | None:intergenic | 40.0% |
| AACCTGTCTTACAGATGTGT+GGG | - | chr3_1:75031593-75031612 | Msa0375330:CDS | 40.0% | |
| !! | TCTTCCATGCCTCCATTTTT+AGG | - | chr3_1:75031658-75031677 | Msa0375330:intron | 40.0% |
| CTTACCTAAAAATGGAGGCA+TGG | + | chr3_1:75031665-75031684 | None:intergenic | 40.0% | |
| AACATGGTGCCTAAACAAAC+AGG | + | chr3_1:75031770-75031789 | None:intergenic | 40.0% | |
| CCTGAAACAAGCAAAAGATG+AGG | + | chr3_1:75031831-75031850 | None:intergenic | 40.0% | |
| ! | CCTCATCTTTTGCTTGTTTC+AGG | - | chr3_1:75031828-75031847 | Msa0375330:intron | 40.0% |
| ! | CATCTTTTGCTTGTTTCAGG+CGG | - | chr3_1:75031831-75031850 | Msa0375330:intron | 40.0% |
| !! | ATGATATACATTGGCTTGGG+TGG | - | chr3_1:75031961-75031980 | Msa0375330:intron | 40.0% |
| TCAGCTTTCTTTCCTACACA+GGG | + | chr3_1:75032004-75032023 | None:intergenic | 40.0% | |
| TTCAGCTTTCTTTCCTACAC+AGG | + | chr3_1:75032005-75032024 | None:intergenic | 40.0% | |
| TGTAGGAAAGAAAGCTGAAG+AGG | - | chr3_1:75032006-75032025 | Msa0375330:intron | 40.0% | |
| AGAAAGCTGAAGAGGATCAA+TGG | - | chr3_1:75032014-75032033 | Msa0375330:intron | 40.0% | |
| TGGCTCTTGATGTTAGTCAT+TGG | - | chr3_1:75032094-75032113 | Msa0375330:intron | 40.0% | |
| TGATCGTTGTCAATATCAGC+CGG | - | chr3_1:75032173-75032192 | Msa0375330:CDS | 40.0% | |
| TTATCTTGGGACTGATACTC+TGG | - | chr3_1:75032220-75032239 | Msa0375330:intron | 40.0% | |
| ! | TACCATACTAGATTTGAGGC+TGG | - | chr3_1:75032389-75032408 | Msa0375330:CDS | 40.0% |
| TTCCAGCCTCAAATCTAGTA+TGG | + | chr3_1:75032394-75032413 | None:intergenic | 40.0% | |
| GCAGCAATTGATTACTTGTC+TGG | - | chr3_1:75032446-75032465 | Msa0375330:intron | 40.0% | |
| ACTCACCTCATACTCATGTA+TGG | + | chr3_1:75032486-75032505 | None:intergenic | 40.0% | |
| ! | TACAGAAGGTATGGCATTTG+AGG | + | chr3_1:75032745-75032764 | None:intergenic | 40.0% |
| TTCAGCATCTACAGAAGGTA+TGG | + | chr3_1:75032754-75032773 | None:intergenic | 40.0% | |
| AAAGCTTCAGCATCTACAGA+AGG | + | chr3_1:75032759-75032778 | None:intergenic | 40.0% | |
| !! | CTGAAGCTTTTTCTCCTTCA+TGG | - | chr3_1:75032769-75032788 | Msa0375330:intron | 40.0% |
| ! | AGAATAAACCACAGGGTGTT+TGG | + | chr3_1:75032918-75032937 | None:intergenic | 40.0% |
| TTCTAATCATTTGGGAGCTG+TGG | - | chr3_1:75032985-75033004 | Msa0375330:intron | 40.0% | |
| GTAGGTCCTACTACTTTATG+TGG | - | chr3_1:75033612-75033631 | Msa0375330:intron | 40.0% | |
| ! | AGGTCCAGCACTTTGAAAAT+GGG | + | chr3_1:75033640-75033659 | None:intergenic | 40.0% |
| ! | TAGGTCCAGCACTTTGAAAA+TGG | + | chr3_1:75033641-75033660 | None:intergenic | 40.0% |
| ! | CAGCTCGACCTTTGAAAATT+TGG | + | chr3_1:75033807-75033826 | None:intergenic | 40.0% |
| ! | CAAATTTTCAAAGGTCGAGC+TGG | - | chr3_1:75033805-75033824 | Msa0375330:CDS | 40.0% |
| TGGGTACATACCTGTATGAA+AGG | - | chr3_1:75033825-75033844 | Msa0375330:CDS | 40.0% | |
| GTCCCAAATATTCGCATCTA+TGG | - | chr3_1:75033857-75033876 | Msa0375330:CDS | 40.0% | |
| GCCCATAGATGCGAATATTT+GGG | + | chr3_1:75033862-75033881 | None:intergenic | 40.0% | |
| ! | TCGTTTGACTTCTTTCGAAG+GGG | + | chr3_1:75033888-75033907 | None:intergenic | 40.0% |
| ! | CTCGTTTGACTTCTTTCGAA+GGG | + | chr3_1:75033889-75033908 | None:intergenic | 40.0% |
| GAATAGCTGTTGAACTTGGT+TGG | - | chr3_1:75034324-75034343 | Msa0375330:exon | 40.0% | |
| ! | GTATCATTTTCAGCATGGAG+TGG | - | chr3_1:75034375-75034394 | Msa0375330:intron | 40.0% |
| GACTGTACATCAGTTAGGAT+TGG | - | chr3_1:75034590-75034609 | Msa0375330:intron | 40.0% | |
| ATGAGATCAGCAAGAGGAAT+TGG | + | chr3_1:75034643-75034662 | None:intergenic | 40.0% | |
| CTATCTATGAGATCAGCAAG+AGG | + | chr3_1:75034649-75034668 | None:intergenic | 40.0% | |
| CTCTTGCTGATCTCATAGAT+AGG | - | chr3_1:75034647-75034666 | Msa0375330:five_prime_UTR | 40.0% | |
| AGGCATCCACTAATTACAGT+AGG | - | chr3_1:75034667-75034686 | Msa0375330:five_prime_UTR | 40.0% | |
| GTGTTGCAGCAAATGTATAC+CGG | + | chr3_1:75034747-75034766 | None:intergenic | 40.0% | |
| TATGGTGTACTCTTTCACAC+TGG | - | chr3_1:75034817-75034836 | Msa0375330:five_prime_UTR | 40.0% | |
| ! | TCGACTTTTAAGCCACGTGT+CGG | - | chr3_1:75029224-75029243 | Msa0375330:three_prime_UTR | 45.0% |
| CAAATGGTTTCCATCGCCAT+TGG | - | chr3_1:75029253-75029272 | Msa0375330:three_prime_UTR | 45.0% | |
| AGAAAGGAGAGGGACCAAAA+TGG | + | chr3_1:75029480-75029499 | None:intergenic | 45.0% | |
| ! | CAGGGTGGGTTTGTTTAGTT+TGG | + | chr3_1:75029526-75029545 | None:intergenic | 45.0% |
| CAAACTAAACAAACCCACCC+TGG | - | chr3_1:75029524-75029543 | Msa0375330:CDS | 45.0% | |
| TCCTATTGGGTGGTTAGCAA+TGG | - | chr3_1:75029714-75029733 | Msa0375330:intron | 45.0% | |
| TCCATTGCTAACCACCCAAT+AGG | + | chr3_1:75029718-75029737 | None:intergenic | 45.0% | |
| TAACTGGGGCTTGGAAGTTT+CGG | + | chr3_1:75029751-75029770 | None:intergenic | 45.0% | |
| TCTGACAAGTGATGTGGTTC+TGG | + | chr3_1:75029791-75029810 | None:intergenic | 45.0% | |
| ACCACATCACTTGTCAGACT+TGG | - | chr3_1:75029793-75029812 | Msa0375330:intron | 45.0% | |
| CAGGGAGATAAGTTAAACGG+CGG | + | chr3_1:75029822-75029841 | None:intergenic | 45.0% | |
| AAGTATAGGGAAATGGGGTC+TGG | + | chr3_1:75029914-75029933 | None:intergenic | 45.0% | |
| CCTGGTGAAGTATAGGGAAA+TGG | + | chr3_1:75029921-75029940 | None:intergenic | 45.0% | |
| CCATTTCCCTATACTTCACC+AGG | - | chr3_1:75029918-75029937 | Msa0375330:intron | 45.0% | |
| ATCGGGGCATACATTACTTG+AGG | - | chr3_1:75030052-75030071 | Msa0375330:intron | 45.0% | |
| ! | AGCTGATTCATACTCGTCTG+TGG | + | chr3_1:75030172-75030191 | None:intergenic | 45.0% |
| GTATGAATCAGCTAGACGGA+AGG | - | chr3_1:75030179-75030198 | Msa0375330:CDS | 45.0% | |
| AATACCAGGAGGAGACATTG+GGG | - | chr3_1:75030527-75030546 | Msa0375330:intron | 45.0% | |
| ATCACAGCGCAATTGTTCCA+TGG | - | chr3_1:75030678-75030697 | Msa0375330:intron | 45.0% | |
| TGCTTGGTATGTTTCTCGTC+AGG | - | chr3_1:75030837-75030856 | Msa0375330:intron | 45.0% | |
| TGTCAAAGATATCTGCCTGC+TGG | - | chr3_1:75030896-75030915 | Msa0375330:intron | 45.0% | |
| GTCAAAGATATCTGCCTGCT+GGG | - | chr3_1:75030897-75030916 | Msa0375330:intron | 45.0% | |
| GCCTGCTGGGTTAACTTTAT+AGG | - | chr3_1:75030910-75030929 | Msa0375330:intron | 45.0% | |
| CTTGAATCAACGTTGCATCG+AGG | - | chr3_1:75030973-75030992 | Msa0375330:intron | 45.0% | |
| TTAGGGTCACGTTGGGTATT+GGG | + | chr3_1:75031181-75031200 | None:intergenic | 45.0% | |
| ! | TTTAGGGTCACGTTGGGTAT+TGG | + | chr3_1:75031182-75031201 | None:intergenic | 45.0% |
| AACAATTGGGGGCTGAAATG+AGG | + | chr3_1:75031242-75031261 | None:intergenic | 45.0% | |
| TCAGCCCCCAATTGTTTCAA+TGG | - | chr3_1:75031246-75031265 | Msa0375330:intron | 45.0% | |
| ATATTGCACACTGGGCACAT+GGG | - | chr3_1:75031401-75031420 | Msa0375330:intron | 45.0% | |
| TGAACATCAACCACCATGTG+TGG | + | chr3_1:75031466-75031485 | None:intergenic | 45.0% | |
| ! | TGTTACACTGGTCTGGAATC+TGG | + | chr3_1:75031565-75031584 | None:intergenic | 45.0% |
| GAACCTGTCTTACAGATGTG+TGG | - | chr3_1:75031592-75031611 | Msa0375330:CDS | 45.0% | |
| ! | AAAATGGAGGCATGGAAGAC+AGG | + | chr3_1:75031657-75031676 | None:intergenic | 45.0% |
| CAAGCAAAAGATGAGGTTGC+CGG | + | chr3_1:75031824-75031843 | None:intergenic | 45.0% | |
| !! | ATATACATTGGCTTGGGTGG+AGG | - | chr3_1:75031964-75031983 | Msa0375330:intron | 45.0% |
| ACAGGTTTGATTCCCTGTGT+AGG | - | chr3_1:75031989-75032008 | Msa0375330:intron | 45.0% | |
| TGACTAACATCAAGAGCCAG+AGG | + | chr3_1:75032093-75032112 | None:intergenic | 45.0% | |
| GATCGTTGTCAATATCAGCC+GGG | - | chr3_1:75032174-75032193 | Msa0375330:CDS | 45.0% | |
| ATCGTTGTCAATATCAGCCG+GGG | - | chr3_1:75032175-75032194 | Msa0375330:CDS | 45.0% | |
| TCAATATCAGCCGGGGAAAA+AGG | - | chr3_1:75032182-75032201 | Msa0375330:CDS | 45.0% | |
| ! | GGAAACTCTTCCTTTTTCCC+CGG | + | chr3_1:75032195-75032214 | None:intergenic | 45.0% |
| AGGCGGAGAAAAATGACTGT+AGG | + | chr3_1:75032286-75032305 | None:intergenic | 45.0% | |
| CCAATTGCTTCACCAATAGC+TGG | + | chr3_1:75032419-75032438 | None:intergenic | 45.0% | |
| CCAGCTATTGGTGAAGCAAT+TGG | - | chr3_1:75032416-75032435 | Msa0375330:CDS | 45.0% | |
| GCAAGCCATACATGAGTATG+AGG | - | chr3_1:75032478-75032497 | Msa0375330:intron | 45.0% | |
| ATGAGATGTCACCACAGAAG+AGG | + | chr3_1:75032618-75032637 | None:intergenic | 45.0% | |
| TGGGTCCCACATAAAGTAGT+AGG | + | chr3_1:75033621-75033640 | None:intergenic | 45.0% | |
| CTGACAGAAGCCTTTCATAC+AGG | + | chr3_1:75033838-75033857 | None:intergenic | 45.0% | |
| GGCCCATAGATGCGAATATT+TGG | + | chr3_1:75033863-75033882 | None:intergenic | 45.0% | |
| ! | GCTCGTTTGACTTCTTTCGA+AGG | + | chr3_1:75033890-75033909 | None:intergenic | 45.0% |
| ! | TGCAACATTTCTGGACCAAC+AGG | - | chr3_1:75033955-75033974 | Msa0375330:intron | 45.0% |
| TAAATACCGATGGAGGGGTT+GGG | + | chr3_1:75034425-75034444 | None:intergenic | 45.0% | |
| AACCCCTCCATCGGTATTTA+GGG | - | chr3_1:75034425-75034444 | Msa0375330:intron | 45.0% | |
| CATTGACCCCTAAATACCGA+TGG | + | chr3_1:75034435-75034454 | None:intergenic | 45.0% | |
| TATCCATGCCCTTCATGACA+CGG | - | chr3_1:75034510-75034529 | Msa0375330:intron | 45.0% | |
| GAAGTTGACCGTGTCATGAA+GGG | + | chr3_1:75034521-75034540 | None:intergenic | 45.0% | |
| AGAAGTTGACCGTGTCATGA+AGG | + | chr3_1:75034522-75034541 | None:intergenic | 45.0% | |
| CATTTGCTTGATCCGACACG+TGG | + | chr3_1:75029239-75029258 | None:intergenic | 50.0% | |
| CACGTGTCGGATCAAGCAAA+TGG | - | chr3_1:75029237-75029256 | Msa0375330:three_prime_UTR | 50.0% | |
| TGGTTTCCATCGCCATTGGT+TGG | - | chr3_1:75029257-75029276 | Msa0375330:three_prime_UTR | 50.0% | |
| ! | GGTTTCCATCGCCATTGGTT+GGG | - | chr3_1:75029258-75029277 | Msa0375330:three_prime_UTR | 50.0% |
| CAGAGCTTAGTGGAGAACAG+CGG | + | chr3_1:75029402-75029421 | None:intergenic | 50.0% | |
| GAACAGCAATAACTGGGGCT+TGG | + | chr3_1:75029760-75029779 | None:intergenic | 50.0% | |
| GCCAAGTCTGACAAGTGATG+TGG | + | chr3_1:75029797-75029816 | None:intergenic | 50.0% | |
| ! | TGACGGTTGATGCACGAACA+GGG | + | chr3_1:75029840-75029859 | None:intergenic | 50.0% |
| ! | TTGACGGTTGATGCACGAAC+AGG | + | chr3_1:75029841-75029860 | None:intergenic | 50.0% |
| AATGCCTTCACAACAGCTGC+AGG | + | chr3_1:75029997-75030016 | None:intergenic | 50.0% | |
| ATACCAGGAGGAGACATTGG+GGG | - | chr3_1:75030528-75030547 | Msa0375330:intron | 50.0% | |
| GGGGGTTCTCTTTAATCACC+CGG | - | chr3_1:75030546-75030565 | Msa0375330:intron | 50.0% | |
| GATATTGCACACTGGGCACA+TGG | - | chr3_1:75031400-75031419 | Msa0375330:intron | 50.0% | |
| TATTGCACACTGGGCACATG+GGG | - | chr3_1:75031402-75031421 | Msa0375330:intron | 50.0% | |
| TTACAGATGTGTGGGCCTAC+AGG | - | chr3_1:75031601-75031620 | Msa0375330:CDS | 50.0% | |
| ! | CTTTTGCTTGTTTCAGGCGG+TGG | - | chr3_1:75031834-75031853 | Msa0375330:intron | 50.0% |
| AAGTTCACAAACCTGGACGG+AGG | + | chr3_1:75031906-75031925 | None:intergenic | 50.0% | |
| CGTTTCTCCTTCACTTCCTC+TGG | - | chr3_1:75032074-75032093 | Msa0375330:intron | 50.0% | |
| TCAAGAGCCAGAGGAAGTGA+AGG | + | chr3_1:75032084-75032103 | None:intergenic | 50.0% | |
| TCTTGGGACTGATACTCTGG+TGG | - | chr3_1:75032223-75032242 | Msa0375330:intron | 50.0% | |
| CATGCAGTTGAGTCACTTCC+AGG | - | chr3_1:75032879-75032898 | Msa0375330:intron | 50.0% | |
| !! | TTTGGCTCTCGGATATGTCC+TGG | + | chr3_1:75032900-75032919 | None:intergenic | 50.0% |
| ! | CATTGAAGGGCACAGAGACT+AGG | + | chr3_1:75033405-75033424 | None:intergenic | 50.0% |
| ! | GGGACCCATTTTCAAAGTGC+TGG | - | chr3_1:75033633-75033652 | Msa0375330:intron | 50.0% |
| TTGACTTCTTTCGAAGGGGC+TGG | + | chr3_1:75033884-75033903 | None:intergenic | 50.0% | |
| CATGGAGTGGCAATCAGATC+AGG | - | chr3_1:75034388-75034407 | Msa0375330:intron | 50.0% | |
| CTAAATACCGATGGAGGGGT+TGG | + | chr3_1:75034426-75034445 | None:intergenic | 50.0% | |
| CAACCCCTCCATCGGTATTT+AGG | - | chr3_1:75034424-75034443 | Msa0375330:intron | 50.0% | |
| ACCCCTCCATCGGTATTTAG+GGG | - | chr3_1:75034426-75034445 | Msa0375330:intron | 50.0% | |
| ACCCCTAAATACCGATGGAG+GGG | + | chr3_1:75034430-75034449 | None:intergenic | 50.0% | |
| GACCCCTAAATACCGATGGA+GGG | + | chr3_1:75034431-75034450 | None:intergenic | 50.0% | |
| TGACCCCTAAATACCGATGG+AGG | + | chr3_1:75034432-75034451 | None:intergenic | 50.0% | |
| ! | TCCATCGCCATTGGTTGGGT+TGG | - | chr3_1:75029262-75029281 | Msa0375330:three_prime_UTR | 55.0% |
| ! | CCATCGCCATTGGTTGGGTT+GGG | - | chr3_1:75029263-75029282 | Msa0375330:three_prime_UTR | 55.0% |
| AGCTTAGTGGAGAACAGCGG+CGG | + | chr3_1:75029399-75029418 | None:intergenic | 55.0% | |
| ! | CTGGTAGTGTGGCCCAAAGA+GGG | + | chr3_1:75029895-75029914 | None:intergenic | 55.0% |
| ! | TCTGGTAGTGTGGCCCAAAG+AGG | + | chr3_1:75029896-75029915 | None:intergenic | 55.0% |
| ! | GGAAATGGGGTCTGGTAGTG+TGG | + | chr3_1:75029906-75029925 | None:intergenic | 55.0% |
| GAAGCCTGCAGCTGTTGTGA+AGG | - | chr3_1:75029990-75030009 | Msa0375330:intron | 55.0% | |
| CATGTGTGGAACACTCTGGC+AGG | + | chr3_1:75031452-75031471 | None:intergenic | 55.0% | |
| ! | CTGCCAGAGTGTTCCACACA+TGG | - | chr3_1:75031450-75031469 | Msa0375330:intron | 55.0% |
| CCACCATGTGTGGAACACTC+TGG | + | chr3_1:75031456-75031475 | None:intergenic | 55.0% | |
| ! | CCAGAGTGTTCCACACATGG+TGG | - | chr3_1:75031453-75031472 | Msa0375330:intron | 55.0% |
| GGCCCACACATCTGTAAGAC+AGG | + | chr3_1:75031598-75031617 | None:intergenic | 55.0% | |
| ATGTGTGGGCCTACAGGCAT+TGG | - | chr3_1:75031607-75031626 | Msa0375330:CDS | 55.0% | |
| ! | ATGGAGGCATGGAAGACAGG+AGG | + | chr3_1:75031654-75031673 | None:intergenic | 55.0% |
| CACAAACCTGGACGGAGGTT+CGG | + | chr3_1:75031901-75031920 | None:intergenic | 55.0% | |
| GAGGCTGGAACACCAGCTAT+TGG | - | chr3_1:75032404-75032423 | Msa0375330:CDS | 55.0% | |
| !! | ACCACAGGGTGTTTGGCTCT+CGG | + | chr3_1:75032911-75032930 | None:intergenic | 55.0% |
| ATTGTGCCCAACCCCTCCAT+CGG | - | chr3_1:75034416-75034435 | Msa0375330:intron | 55.0% | |
| TGACCGTGTCATGAAGGGCA+TGG | + | chr3_1:75034516-75034535 | None:intergenic | 55.0% | |
| CCCAACCCAACCAATGGCGA+TGG | + | chr3_1:75029266-75029285 | None:intergenic | 60.0% | |
| GAACCCCCAATGTCTCCTCC+TGG | + | chr3_1:75030534-75030553 | None:intergenic | 60.0% | |
| CTTATGCCGAACCTCCGTCC+AGG | - | chr3_1:75031892-75031911 | Msa0375330:intron | 60.0% | |
| !! | TTGGCTTGGGTGGAGGTCAC+AGG | - | chr3_1:75031971-75031990 | Msa0375330:intron | 60.0% |
| TCCGAGAGCCAAACACCCTG+TGG | - | chr3_1:75032907-75032926 | Msa0375330:intron | 60.0% | |
| GATGGAGGGGTTGGGCACAA+TGG | + | chr3_1:75034417-75034436 | None:intergenic | 60.0% | |
| GCACACTGGGCACATGGGGT+TGG | - | chr3_1:75031406-75031425 | Msa0375330:intron | 65.0% | |
| GTGGAGAACAGCGGCGGCGA+GGG | + | chr3_1:75029393-75029412 | None:intergenic | 70.0% | |
| AGTGGAGAACAGCGGCGGCG+AGG | + | chr3_1:75029394-75029413 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 75029188 | 75034878 | 75029188 | ID=Msa0375330;Name=Msa0375330 |
| chr3_1 | mRNA | 75029188 | 75034878 | 75029188 | ID=Msa0375330-mRNA-1;Parent=Msa0375330;Name=Msa0375330-mRNA-1;_AED=0.22;_eAED=0.22;_QI=319|1|1|1|0.88|0.8|10|320|466 |
| chr3_1 | exon | 75029188 | 75029678 | 75029188 | ID=Msa0375330-mRNA-1:exon:17562;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75030090 | 75030248 | 75030090 | ID=Msa0375330-mRNA-1:exon:17561;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75031567 | 75031666 | 75031567 | ID=Msa0375330-mRNA-1:exon:17560;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75032153 | 75032216 | 75032153 | ID=Msa0375330-mRNA-1:exon:17559;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75032387 | 75032459 | 75032387 | ID=Msa0375330-mRNA-1:exon:17558;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75032541 | 75032686 | 75032541 | ID=Msa0375330-mRNA-1:exon:17557;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75033224 | 75033410 | 75033224 | ID=Msa0375330-mRNA-1:exon:17556;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75033746 | 75033905 | 75033746 | ID=Msa0375330-mRNA-1:exon:17555;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75033993 | 75034393 | 75033993 | ID=Msa0375330-mRNA-1:exon:17554;Parent=Msa0375330-mRNA-1 |
| chr3_1 | exon | 75034620 | 75034878 | 75034620 | ID=Msa0375330-mRNA-1:exon:17553;Parent=Msa0375330-mRNA-1 |
| chr3_1 | five_prime_UTR | 75034620 | 75034878 | 75034620 | ID=Msa0375330-mRNA-1:five_prime_utr;Parent=Msa0375330-mRNA-1 |
| chr3_1 | five_prime_UTR | 75034334 | 75034393 | 75034334 | ID=Msa0375330-mRNA-1:five_prime_utr;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75033993 | 75034333 | 75033993 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75033746 | 75033905 | 75033746 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75033224 | 75033410 | 75033224 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75032541 | 75032686 | 75032541 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75032387 | 75032459 | 75032387 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75032153 | 75032216 | 75032153 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75031567 | 75031666 | 75031567 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75030090 | 75030248 | 75030090 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | CDS | 75029508 | 75029678 | 75029508 | ID=Msa0375330-mRNA-1:cds;Parent=Msa0375330-mRNA-1 |
| chr3_1 | three_prime_UTR | 75029188 | 75029507 | 75029188 | ID=Msa0375330-mRNA-1:three_prime_utr;Parent=Msa0375330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
