Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372300 | XP_013461156.1 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372300 | A0A072VAG8 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017670 | Msa0372300 | 0.824036 | 1.003014e-53 | -8.615850e-47 |
| Msa0030700 | Msa0372300 | 0.839508 | 1.519861e-57 | -8.615850e-47 |
| Msa0078120 | Msa0372300 | 0.833977 | 3.911582e-56 | -8.615850e-47 |
| Msa0098040 | Msa0372300 | 0.831153 | 1.961646e-55 | -8.615850e-47 |
| Msa0105410 | Msa0372300 | 0.805598 | 1.235581e-49 | -8.615850e-47 |
| Msa0123800 | Msa0372300 | 0.818850 | 1.580505e-52 | -8.615850e-47 |
| Msa0152850 | Msa0372300 | 0.824715 | 6.946039e-54 | -8.615850e-47 |
| Msa0168310 | Msa0372300 | 0.803065 | 4.163774e-49 | -8.615850e-47 |
| Msa0220400 | Msa0372300 | -0.825781 | 3.887560e-54 | -8.615850e-47 |
| Msa0235290 | Msa0372300 | 0.814360 | 1.603036e-51 | -8.615850e-47 |
| Msa0365210 | Msa0372300 | 0.839899 | 1.202537e-57 | -8.615850e-47 |
| Msa0372300 | Msa0375330 | -0.816963 | 4.216316e-52 | -8.615850e-47 |
| Msa0372300 | Msa0405460 | -0.801255 | 9.813376e-49 | -8.615850e-47 |
| Msa0372300 | Msa0405470 | -0.818872 | 1.562386e-52 | -8.615850e-47 |
| Msa0372300 | Msa0405550 | -0.813232 | 2.840323e-51 | -8.615850e-47 |
| Msa0372300 | Msa0420610 | 0.922222 | 1.301696e-88 | -8.615850e-47 |
| Msa0372300 | Msa0457560 | 0.805392 | 1.365177e-49 | -8.615850e-47 |
| Msa0372300 | Msa0465820 | 0.811790 | 5.869319e-51 | -8.615850e-47 |
| Msa0372300 | Msa0483970 | -0.814542 | 1.461079e-51 | -8.615850e-47 |
| Msa0372300 | Msa0512630 | 0.927403 | 1.233402e-91 | -8.615850e-47 |
| Msa0372300 | Msa0543560 | 0.817410 | 3.346528e-52 | -8.615850e-47 |
| Msa0372300 | Msa0583360 | -0.811784 | 5.887897e-51 | -8.615850e-47 |
| Msa0372300 | Msa0592330 | 0.826123 | 3.223798e-54 | -8.615850e-47 |
| Msa0372300 | Msa0599420 | 0.815713 | 8.028021e-52 | -8.615850e-47 |
| Msa0372300 | Msa0624420 | 0.807896 | 4.040415e-50 | -8.615850e-47 |
| Msa0372300 | Msa0653670 | 0.800959 | 1.128085e-48 | -8.615850e-47 |
| Msa0372300 | Msa0657710 | 0.802811 | 4.699418e-49 | -8.615850e-47 |
| Msa0372300 | Msa0702720 | 0.808519 | 2.976631e-50 | -8.615850e-47 |
| Msa0372300 | Msa0702800 | 0.801152 | 1.030396e-48 | -8.615850e-47 |
| Msa0372300 | Msa0733010 | 0.807278 | 5.464832e-50 | -8.615850e-47 |
| Msa0372300 | Msa0773990 | 0.809428 | 1.901496e-50 | -8.615850e-47 |
| Msa0372300 | Msa0792370 | 0.825363 | 4.882269e-54 | -8.615850e-47 |
| Msa0372300 | Msa0795750 | 0.825605 | 4.280485e-54 | -8.615850e-47 |
| Msa0372300 | Msa0828960 | 0.802891 | 4.524014e-49 | -8.615850e-47 |
| Msa0372300 | Msa0833530 | 0.822758 | 1.996302e-53 | -8.615850e-47 |
| Msa0372300 | Msa0833950 | -0.807060 | 6.079302e-50 | -8.615850e-47 |
| Msa0372300 | Msa0855870 | 0.817915 | 2.574146e-52 | -8.615850e-47 |
| Msa0372300 | Msa0867660 | -0.813131 | 2.989640e-51 | -8.615850e-47 |
| Msa0372300 | Msa0879930 | 0.824761 | 6.773514e-54 | -8.615850e-47 |
| Msa0372300 | Msa0908470 | -0.809123 | 2.210283e-50 | -8.615850e-47 |
| Msa0372300 | Msa0908510 | -0.806272 | 8.913905e-50 | -8.615850e-47 |
| Msa0372300 | Msa0908630 | -0.803864 | 2.843483e-49 | -8.615850e-47 |
| Msa0372300 | Msa0908700 | -0.809376 | 1.951241e-50 | -8.615850e-47 |
| Msa0372300 | Msa0924900 | -0.814269 | 1.679188e-51 | -8.615850e-47 |
| Msa0372300 | Msa0930270 | 0.818529 | 1.869693e-52 | -8.615850e-47 |
| Msa0372300 | Msa0967170 | 0.812051 | 5.148951e-51 | -8.615850e-47 |
| Msa0372300 | Msa0972680 | 0.804604 | 1.994349e-49 | -8.615850e-47 |
| Msa0372300 | Msa0983600 | -0.812749 | 3.624517e-51 | -8.615850e-47 |
| Msa0372300 | Msa0983610 | -0.813091 | 3.050157e-51 | -8.615850e-47 |
| Msa0372300 | Msa1030810 | 0.800172 | 1.632517e-48 | -8.615850e-47 |
| Msa0372300 | Msa1086490 | -0.807984 | 3.869648e-50 | -8.615850e-47 |
| Msa0372300 | Msa1086760 | -0.812023 | 5.222072e-51 | -8.615850e-47 |
| Msa0372300 | Msa1086770 | -0.801958 | 7.044114e-49 | -8.615850e-47 |
| Msa0372300 | Msa1086940 | -0.808334 | 3.259040e-50 | -8.615850e-47 |
| Msa0372300 | Msa1087070 | -0.810767 | 9.786567e-51 | -8.615850e-47 |
| Msa0372300 | Msa1087090 | -0.812401 | 4.319170e-51 | -8.615850e-47 |
| Msa0372300 | Msa1089450 | 0.806051 | 9.922105e-50 | -8.615850e-47 |
| Msa0372300 | Msa1106590 | 0.802575 | 5.257143e-49 | -8.615850e-47 |
| Msa0372300 | Msa1207920 | -0.810551 | 1.089405e-50 | -8.615850e-47 |
| Msa0372300 | Msa1211230 | -0.810303 | 1.232405e-50 | -8.615850e-47 |
| Msa0372300 | Msa1225860 | -0.813143 | 2.971623e-51 | -8.615850e-47 |
| Msa0372300 | Msa1238600 | 0.836493 | 9.059994e-57 | -8.615850e-47 |
| Msa0372300 | Msa1238660 | 0.819703 | 1.010538e-52 | -8.615850e-47 |
| Msa0372300 | Msa1299400 | -0.811438 | 7.002633e-51 | -8.615850e-47 |
| Msa0372300 | Msa1319560 | 0.817892 | 2.605121e-52 | -8.615850e-47 |
| Msa0372300 | Msa1325410 | -0.820672 | 6.059359e-53 | -8.615850e-47 |
| Msa0372300 | Msa1331050 | -0.813734 | 2.203015e-51 | -8.615850e-47 |
| Msa0372300 | Msa1341840 | 0.823627 | 1.250920e-53 | -8.615850e-47 |
| Msa0372300 | Msa1342380 | 0.804777 | 1.835525e-49 | -8.615850e-47 |
| Msa0372300 | Msa1348170 | -0.810448 | 1.147177e-50 | -8.615850e-47 |
| Msa0372300 | Msa1354360 | -0.807339 | 5.305954e-50 | -8.615850e-47 |
| Msa0372300 | Msa1354400 | -0.807753 | 4.333280e-50 | -8.615850e-47 |
| Msa0372300 | Msa1354520 | -0.809977 | 1.448957e-50 | -8.615850e-47 |
| Msa0372300 | Msa1354530 | -0.807062 | 6.071844e-50 | -8.615850e-47 |
| Msa0372300 | Msa1354650 | -0.805669 | 1.194184e-49 | -8.615850e-47 |
| Msa0372300 | Msa1354660 | -0.810072 | 1.382217e-50 | -8.615850e-47 |
| Msa0372300 | Msa1354790 | -0.813110 | 3.021190e-51 | -8.615850e-47 |
| Msa0372300 | Msa1354960 | -0.816380 | 5.697032e-52 | -8.615850e-47 |
| Msa0372300 | Msa1356600 | -0.806827 | 6.809775e-50 | -8.615850e-47 |
| Msa0372300 | Msa1364350 | -0.819821 | 9.495748e-53 | -8.615850e-47 |
| Msa0372300 | Msa1365990 | -0.808196 | 3.488340e-50 | -8.615850e-47 |
| Msa0372300 | Msa1366020 | -0.809820 | 1.566034e-50 | -8.615850e-47 |
| Msa0372300 | Msa1366030 | -0.804543 | 2.054352e-49 | -8.615850e-47 |
| Msa0372300 | Msa1366060 | -0.810167 | 1.318515e-50 | -8.615850e-47 |
| Msa0372300 | Msa1368260 | -0.809380 | 1.947603e-50 | -8.615850e-47 |
| Msa0372300 | Msa1385360 | -0.801930 | 7.134937e-49 | -8.615850e-47 |
| Msa0372300 | Msa1385390 | -0.815357 | 9.636414e-52 | -8.615850e-47 |
| Msa0372300 | Msa1391130 | -0.809739 | 1.630315e-50 | -8.615850e-47 |
| Msa0372300 | Msa1391140 | -0.813591 | 2.368542e-51 | -8.615850e-47 |
| Msa0372300 | Msa1391260 | -0.807260 | 5.513744e-50 | -8.615850e-47 |
| Msa0372300 | Msa1442920 | 0.803175 | 3.952036e-49 | -8.615850e-47 |
| Msa0372300 | Msa1452710 | 0.805309 | 1.420623e-49 | -8.615850e-47 |
| Msa0372300 | Msa1461370 | 0.808464 | 3.057862e-50 | -8.615850e-47 |
| Msa0240900 | Msa0372300 | 0.812465 | 4.181831e-51 | -8.615850e-47 |
| Msa0269170 | Msa0372300 | -0.814555 | 1.451733e-51 | -8.615850e-47 |
| Msa0269970 | Msa0372300 | 0.800315 | 1.527049e-48 | -8.615850e-47 |
| Msa0271540 | Msa0372300 | 0.800289 | 1.545823e-48 | -8.615850e-47 |
| Msa0299530 | Msa0372300 | -0.806023 | 1.005925e-49 | -8.615850e-47 |
| Msa0307670 | Msa0372300 | 0.828426 | 9.048993e-55 | -8.615850e-47 |
| Msa0313900 | Msa0372300 | 0.808457 | 3.068469e-50 | -8.615850e-47 |
| Msa0317970 | Msa0372300 | 0.807511 | 4.878664e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372300 | MtrunA17_Chr3g0120281 | 95.588 | 476 | 7 | 1 | 1 | 462 | 1 | 476 | 0.0 | 931 |
| Msa0372300 | MtrunA17_Chr4g0029221 | 44.780 | 431 | 198 | 9 | 45 | 454 | 95 | 506 | 2.75e-108 | 330 |
| Msa0372300 | MtrunA17_Chr1g0181371 | 39.277 | 415 | 200 | 12 | 67 | 454 | 97 | 486 | 1.12e-87 | 276 |
| Msa0372300 | MtrunA17_Chr2g0326551 | 40.967 | 393 | 195 | 11 | 71 | 441 | 89 | 466 | 2.47e-82 | 263 |
| Msa0372300 | MtrunA17_Chr2g0286611 | 34.515 | 423 | 212 | 15 | 25 | 424 | 24 | 404 | 1.56e-57 | 195 |
| Msa0372300 | MtrunA17_Chr7g0246251 | 32.883 | 222 | 94 | 5 | 256 | 437 | 1 | 207 | 1.53e-28 | 112 |
| Msa0372300 | MtrunA17_Chr7g0246271 | 37.427 | 171 | 77 | 5 | 238 | 392 | 45 | 201 | 6.08e-27 | 107 |
| Msa0372300 | MtrunA17_Chr7g0240961 | 41.304 | 92 | 41 | 3 | 214 | 294 | 80 | 169 | 2.92e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0372300 | AT5G60580.1 | 48.446 | 386 | 159 | 10 | 55 | 422 | 84 | 447 | 6.59e-104 | 318 |
| Msa0372300 | AT5G60580.3 | 48.446 | 386 | 159 | 10 | 55 | 422 | 84 | 447 | 6.59e-104 | 318 |
| Msa0372300 | AT5G60580.4 | 47.583 | 393 | 159 | 11 | 55 | 422 | 84 | 454 | 4.46e-101 | 311 |
| Msa0372300 | AT5G60580.2 | 47.583 | 393 | 159 | 11 | 55 | 422 | 84 | 454 | 4.46e-101 | 311 |
| Msa0372300 | AT3G09760.1 | 40.420 | 381 | 184 | 11 | 76 | 435 | 115 | 473 | 9.33e-82 | 261 |
| Msa0372300 | AT5G03180.1 | 38.083 | 386 | 185 | 14 | 76 | 437 | 97 | 452 | 3.89e-76 | 246 |
| Msa0372300 | AT5G03180.4 | 37.887 | 388 | 187 | 14 | 76 | 437 | 62 | 421 | 8.92e-76 | 244 |
| Msa0372300 | AT5G03180.2 | 37.113 | 388 | 190 | 13 | 76 | 437 | 97 | 456 | 1.74e-75 | 244 |
| Msa0372300 | AT3G06330.1 | 34.889 | 407 | 211 | 10 | 33 | 424 | 48 | 415 | 3.02e-58 | 198 |
| Msa0372300 | AT3G06330.4 | 41.111 | 270 | 132 | 4 | 171 | 426 | 50 | 306 | 3.60e-57 | 192 |
| Msa0372300 | AT3G06330.2 | 44.444 | 225 | 110 | 2 | 216 | 426 | 25 | 248 | 4.76e-56 | 187 |
| Msa0372300 | AT5G03180.5 | 37.231 | 325 | 154 | 12 | 76 | 374 | 97 | 397 | 1.87e-54 | 187 |
| Msa0372300 | AT5G03180.3 | 37.920 | 327 | 153 | 13 | 76 | 374 | 97 | 401 | 5.86e-54 | 186 |
| Msa0372300 | AT5G18760.1 | 33.154 | 371 | 205 | 8 | 65 | 421 | 56 | 397 | 4.56e-44 | 160 |
| Msa0372300 | AT3G06330.3 | 33.430 | 344 | 175 | 10 | 33 | 361 | 48 | 352 | 1.11e-33 | 130 |
| Msa0372300 | AT5G18760.2 | 32.759 | 290 | 162 | 8 | 65 | 350 | 56 | 316 | 6.80e-27 | 111 |
| Msa0372300 | AT2G37950.1 | 46.774 | 62 | 30 | 2 | 234 | 294 | 80 | 139 | 1.99e-12 | 66.6 |
| Msa0372300 | AT5G05830.1 | 35.833 | 120 | 66 | 3 | 240 | 349 | 79 | 197 | 1.62e-11 | 63.9 |
| Msa0372300 | AT5G01070.1 | 30.657 | 137 | 76 | 5 | 234 | 366 | 74 | 195 | 2.56e-11 | 63.5 |
Find 110 sgRNAs with CRISPR-Local
Find 307 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTTCAACATTCACTGGATT+TGG | 0.151106 | 3_1:+70686719 | Msa0372300:CDS |
| CTACAAACTGCTTCTTCTTC+TGG | 0.229948 | 3_1:-70684219 | None:intergenic |
| TAAGACCTGCAACAGATTCT+AGG | 0.241872 | 3_1:+70683684 | Msa0372300:CDS |
| GTGTACCAGGTTTCAGATTT+GGG | 0.251435 | 3_1:+70685816 | Msa0372300:intron |
| AGTGTACCAGGTTTCAGATT+TGG | 0.280953 | 3_1:+70685815 | Msa0372300:intron |
| TACTTTCTGATAGGAGCTTT+AGG | 0.312686 | 3_1:+70683255 | Msa0372300:CDS |
| AGATGAAAGACTAGGCCTTC+TGG | 0.314784 | 3_1:-70683090 | None:intergenic |
| TTTCAACATTCACTGGATTT+GGG | 0.323066 | 3_1:+70686720 | Msa0372300:CDS |
| GTTACTCCAATTGCTAATTC+AGG | 0.332975 | 3_1:+70683440 | Msa0372300:CDS |
| TCACCTGAATCTAACTTTGA+TGG | 0.339013 | 3_1:+70682379 | Msa0372300:exon |
| GCAACAACTTGAAATATAAT+AGG | 0.343424 | 3_1:-70682328 | None:intergenic |
| TTCTTCTCTTCTTCATCATC+AGG | 0.347218 | 3_1:+70682451 | Msa0372300:CDS |
| CCCATCTGATATATTCCATT+AGG | 0.353626 | 3_1:-70686766 | None:intergenic |
| GCACTTTCTAGTGTCCTTGT+TGG | 0.354525 | 3_1:-70683122 | None:intergenic |
| CAGCATGAATTCTCTCCTAA+TGG | 0.357709 | 3_1:+70686751 | Msa0372300:CDS |
| TTAGCGGCTTTGACATTAAC+CGG | 0.367120 | 3_1:-70683659 | None:intergenic |
| CAGAAGAAGAAGCAGTTTGT+AGG | 0.369236 | 3_1:+70684220 | Msa0372300:CDS |
| TCTCCATCAAAGTTAGATTC+AGG | 0.384944 | 3_1:-70682382 | None:intergenic |
| ATCATCAGATAATGGTCCTT+TGG | 0.385393 | 3_1:+70683334 | Msa0372300:CDS |
| ATATCAGATGGGAAACAAAT+AGG | 0.392592 | 3_1:+70686777 | Msa0372300:CDS |
| AGAGAGCAGTAACTAATTAC+AGG | 0.396825 | 3_1:+70684469 | Msa0372300:CDS |
| CTAGTCCGCCGACTGTTGTT+CGG | 0.403377 | 3_1:+70684424 | Msa0372300:CDS |
| GATACTTTATCATCAGATAA+TGG | 0.405699 | 3_1:+70683326 | Msa0372300:CDS |
| TTTGGTGGAGCTTGCGGAAG+GGG | 0.407562 | 3_1:+70684248 | Msa0372300:CDS |
| ACTTGAAATATAATAGGAAA+TGG | 0.409263 | 3_1:-70682322 | None:intergenic |
| GTTCTTCTTTCAACATTCAC+TGG | 0.409765 | 3_1:+70686713 | Msa0372300:CDS |
| AGAGAAGAATCTGACATCAT+TGG | 0.413265 | 3_1:-70682437 | None:intergenic |
| AGCAGTTTGTAGGATTTGTT+TGG | 0.425476 | 3_1:+70684230 | Msa0372300:CDS |
| CAGTGAGCAGGAGTTACATA+TGG | 0.426184 | 3_1:+70686530 | Msa0372300:intron |
| ATAATAAGCCTTCAACTTCA+AGG | 0.427266 | 3_1:+70683357 | Msa0372300:CDS |
| ATCTATCATTGCTTCAACCA+TGG | 0.437805 | 3_1:+70685893 | Msa0372300:CDS |
| TCTGCACCTGAATTAGCAAT+TGG | 0.438182 | 3_1:-70683446 | None:intergenic |
| AGACGCCTAGAATCTGTTGC+AGG | 0.448575 | 3_1:-70683689 | None:intergenic |
| ACTTTGGTAGAATGTGGCCT+TGG | 0.449976 | 3_1:-70683212 | None:intergenic |
| TGCAACAGATTCTAGGCGTC+TGG | 0.456493 | 3_1:+70683691 | Msa0372300:CDS |
| AATAGAATATATGCGCAAAC+AGG | 0.461916 | 3_1:-70686585 | None:intergenic |
| GAATGAGACCTTGAAGTTGA+AGG | 0.470115 | 3_1:-70683365 | None:intergenic |
| AGAGTGTTACTGGAAGATTC+CGG | 0.479931 | 3_1:-70684392 | None:intergenic |
| GAATTAGCAATTGGAGTAAC+CGG | 0.483095 | 3_1:-70683437 | None:intergenic |
| TTGGTAGAATGTGGCCTTGG+TGG | 0.484999 | 3_1:-70683209 | None:intergenic |
| ACAGGATGACAAATGCGAAC+TGG | 0.485665 | 3_1:-70686567 | None:intergenic |
| GCAGGAGAAAGGCAATGAAA+TGG | 0.491496 | 3_1:-70685853 | None:intergenic |
| TCTATCATTGCTTCAACCAT+GGG | 0.492217 | 3_1:+70685894 | Msa0372300:CDS |
| TTTCATAGAGGACTTGACTT+TGG | 0.494952 | 3_1:-70683228 | None:intergenic |
| TAAAGCGGCGCATTCGTTAC+CGG | 0.496773 | 3_1:+70683418 | Msa0372300:CDS |
| CCTTGGTGGCAGTCCTCTAG+TGG | 0.497730 | 3_1:-70683195 | None:intergenic |
| TGTTTGGTGGAGCTTGCGGA+AGG | 0.499210 | 3_1:+70684246 | Msa0372300:CDS |
| GGCAGTCCTCTAGTGGAACC+TGG | 0.502946 | 3_1:-70683188 | None:intergenic |
| TGTTGCAGGTCTTAAATTAG+CGG | 0.503069 | 3_1:-70683675 | None:intergenic |
| CTCTTGCATTGAATCACTGC+GGG | 0.504151 | 3_1:-70683765 | None:intergenic |
| TTCTTCTTCTGGAATATCCT+CGG | 0.504900 | 3_1:-70684208 | None:intergenic |
| GAAACACCATCAGTAGTTGC+TGG | 0.505889 | 3_1:-70683740 | None:intergenic |
| ACCACTTTACTGCACAGTCT+TGG | 0.510134 | 3_1:-70684323 | None:intergenic |
| TCCTAATGGAATATATCAGA+TGG | 0.511034 | 3_1:+70686765 | Msa0372300:CDS |
| AGTGATTCAATGCAAGAGAT+TGG | 0.513825 | 3_1:+70683770 | Msa0372300:CDS |
| GTGGTATCAACTACAGTCAT+TGG | 0.514336 | 3_1:-70686898 | None:intergenic |
| ATGCTAACCAAGACAAGTAC+TGG | 0.518939 | 3_1:-70685584 | None:intergenic |
| ACCAAGACTGTGCAGTAAAG+TGG | 0.528389 | 3_1:+70684322 | Msa0372300:CDS |
| GTAAAGTGGTTTAGTATCAA+AGG | 0.531954 | 3_1:+70684336 | Msa0372300:CDS |
| AGACCTAAAATGCAGGAGAA+AGG | 0.534858 | 3_1:-70685864 | None:intergenic |
| AGTTTGTAGGATTTGTTTGG+TGG | 0.537738 | 3_1:+70684233 | Msa0372300:CDS |
| CCATCAGTAGTTGCTGGCTG+TGG | 0.539566 | 3_1:-70683734 | None:intergenic |
| ATGTCTGCAAGCAGGATGTC+CGG | 0.544697 | 3_1:+70684373 | Msa0372300:CDS |
| TTGGTGGAGCTTGCGGAAGG+GGG | 0.544999 | 3_1:+70684249 | Msa0372300:CDS |
| TGAAAGGAGACCTAAAATGC+AGG | 0.547003 | 3_1:-70685871 | None:intergenic |
| GTTTGGTGGAGCTTGCGGAA+GGG | 0.550368 | 3_1:+70684247 | Msa0372300:CDS |
| GGATGTACCAGTACTTGTCT+TGG | 0.550915 | 3_1:+70685577 | Msa0372300:CDS |
| TGCGCCGCTTTACTCGATGA+AGG | 0.559142 | 3_1:-70683407 | None:intergenic |
| AATGAAATGGCGAGAGCACG+TGG | 0.562922 | 3_1:-70685840 | None:intergenic |
| AACGTATGCCGAACAACAGT+CGG | 0.564365 | 3_1:-70684432 | None:intergenic |
| GGTCCTACATTATCAAGTCC+AGG | 0.565636 | 3_1:+70683170 | Msa0372300:CDS |
| TGTTAATTTCACAGTCCAGA+AGG | 0.566940 | 3_1:+70683075 | Msa0372300:intron |
| CTTGTAGCTTAATGTGAGTG+CGG | 0.568172 | 3_1:+70686682 | Msa0372300:intron |
| TGCATCCTTTGCAGTTGATG+TGG | 0.568430 | 3_1:-70686863 | None:intergenic |
| GTTGAAGGCTTATTATCCAA+AGG | 0.569830 | 3_1:-70683350 | None:intergenic |
| GATTTGTTTGGTGGAGCTTG+CGG | 0.571135 | 3_1:+70684242 | Msa0372300:CDS |
| TAATGTAGGACCATCTGTCT+TGG | 0.572242 | 3_1:-70683159 | None:intergenic |
| ATGACTGTAGTTGATACCAC+TGG | 0.573119 | 3_1:+70686901 | Msa0372300:exon |
| TAAATATATCTGAAGAGTGA+AGG | 0.578970 | 3_1:+70687106 | Msa0372300:three_prime_UTR |
| TTGAAGCAATGATAGATGAA+AGG | 0.581811 | 3_1:-70685887 | None:intergenic |
| GAATCTAACTTTGATGGAGA+AGG | 0.587506 | 3_1:+70682385 | Msa0372300:exon |
| AGTGAGCAGGAGTTACATAT+GGG | 0.587689 | 3_1:+70686531 | Msa0372300:intron |
| CCTAATGGAATATATCAGAT+GGG | 0.587851 | 3_1:+70686766 | Msa0372300:CDS |
| AGGATGGACTGCAGTTGCAA+AGG | 0.592249 | 3_1:+70684282 | Msa0372300:CDS |
| GACTTGACTTTGGTAGAATG+TGG | 0.592551 | 3_1:-70683218 | None:intergenic |
| TCAAGTCCAGGTTCCACTAG+AGG | 0.596293 | 3_1:+70683182 | Msa0372300:CDS |
| GACATGTGATGTCTGCAAGC+AGG | 0.596981 | 3_1:+70684365 | Msa0372300:CDS |
| AGTCATTGAAGATGCTTCCG+AGG | 0.600332 | 3_1:+70684191 | Msa0372300:intron |
| TCAGGTGCAGAGAATGTACA+TGG | 0.600495 | 3_1:+70683458 | Msa0372300:CDS |
| CCACTAGAGGACTGCCACCA+AGG | 0.602093 | 3_1:+70683195 | Msa0372300:CDS |
| CCACAGCCAGCAACTACTGA+TGG | 0.604437 | 3_1:+70683734 | Msa0372300:CDS |
| TGTACATGGAAGACATGTAG+AGG | 0.604726 | 3_1:+70683472 | Msa0372300:CDS |
| GTTCCCTTCATCGAGTAAAG+CGG | 0.605134 | 3_1:+70683403 | Msa0372300:CDS |
| AGAATGCAGACATATACTCT+AGG | 0.607758 | 3_1:+70687067 | Msa0372300:three_prime_UTR |
| AAGATTGGCATTCTAGAGTG+TGG | 0.608275 | 3_1:+70686999 | Msa0372300:three_prime_UTR |
| TCATCTTCTACCAAGACAGA+TGG | 0.609887 | 3_1:+70683149 | Msa0372300:CDS |
| TATACTCTACAGGATCTGGC+AGG | 0.611321 | 3_1:+70685556 | Msa0372300:intron |
| GACAACCACATCAACTGCAA+AGG | 0.622140 | 3_1:+70686858 | Msa0372300:CDS |
| GCGCCGCTTTACTCGATGAA+GGG | 0.624936 | 3_1:-70683406 | None:intergenic |
| CTAACTTTGATGGAGAAGGA+AGG | 0.627321 | 3_1:+70682389 | Msa0372300:exon |
| GAACCTGGACTTGATAATGT+AGG | 0.628266 | 3_1:-70683173 | None:intergenic |
| CATCTCTACAAATACCAACA+AGG | 0.638179 | 3_1:+70683108 | Msa0372300:CDS |
| ATTTGTAGAGATGAAAGACT+AGG | 0.650609 | 3_1:-70683098 | None:intergenic |
| GTTTAAAATACTACTGCACA+TGG | 0.670993 | 3_1:-70687041 | None:intergenic |
| CATGGAAGACATGTAGAGGG+TGG | 0.692052 | 3_1:+70683476 | Msa0372300:CDS |
| TAAAATACTACTGCACATGG+TGG | 0.700579 | 3_1:-70687038 | None:intergenic |
| GTACATGGAAGACATGTAGA+GGG | 0.703736 | 3_1:+70683473 | Msa0372300:CDS |
| TCTCTTGCATTGAATCACTG+CGG | 0.705550 | 3_1:-70683766 | None:intergenic |
| ATGAAATGGCGAGAGCACGT+GGG | 0.733732 | 3_1:-70685839 | None:intergenic |
| GTATGCCGAACAACAGTCGG+CGG | 0.741737 | 3_1:-70684429 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATAATTTTTAGCTTT+TGG | + | chr3_1:70682609-70682628 | Msa0372300:intron | 10.0% |
| !!! | ATTTATAATTTTTAGCTTTT+GGG | + | chr3_1:70682610-70682629 | Msa0372300:intron | 10.0% |
| !! | TATCTTTATAGATATTAAAT+AGG | + | chr3_1:70683964-70683983 | Msa0372300:intron | 10.0% |
| !!! | ATATTTTTTCATTTTCTTTT+TGG | + | chr3_1:70685975-70685994 | Msa0372300:intron | 10.0% |
| !!! | TATTTTTTCATTTTCTTTTT+GGG | + | chr3_1:70685976-70685995 | Msa0372300:intron | 10.0% |
| !!! | TTTTAAATATGTTTTTTTGT+TGG | + | chr3_1:70686507-70686526 | Msa0372300:intron | 10.0% |
| !!! | TAATTTTTCTTTAGATCAAA+TGG | + | chr3_1:70682547-70682566 | Msa0372300:intron | 15.0% |
| !!! | AATTTTTCTTTAGATCAAAT+GGG | + | chr3_1:70682548-70682567 | Msa0372300:intron | 15.0% |
| !! | AATATTGGAGAAAATAAAAA+AGG | - | chr3_1:70682650-70682669 | None:intergenic | 15.0% |
| !!! | TTCTCCAATATTTTTTTTTT+TGG | + | chr3_1:70682658-70682677 | Msa0372300:intron | 15.0% |
| !! | ACAACCAAAAAAAAAAATAT+TGG | - | chr3_1:70682665-70682684 | None:intergenic | 15.0% |
| !!! | TTTTATCATAAACCATATTT+CGG | + | chr3_1:70685016-70685035 | Msa0372300:intron | 15.0% |
| !! | TTATTTGAACAATATTCATA+CGG | - | chr3_1:70686026-70686045 | None:intergenic | 15.0% |
| !! | ACTTGAAATATAATAGGAAA+TGG | - | chr3_1:70682325-70682344 | None:intergenic | 20.0% |
| !! | AATGACACAAAAATATCTAA+TGG | - | chr3_1:70682860-70682879 | None:intergenic | 20.0% |
| !!! | ATTATTTGTTGATTAAGATG+TGG | - | chr3_1:70682885-70682904 | None:intergenic | 20.0% |
| !! | AAAAACTAGATTGCTAAAAA+AGG | - | chr3_1:70682949-70682968 | None:intergenic | 20.0% |
| !! | AGTGACATAAAAATATCTAA+TGG | - | chr3_1:70682977-70682996 | None:intergenic | 20.0% |
| !! | AAATTTGGTACATTAAAATG+TGG | - | chr3_1:70683002-70683021 | None:intergenic | 20.0% |
| !! | AAATACATCAAACTCAAATT+TGG | - | chr3_1:70683017-70683036 | None:intergenic | 20.0% |
| !!! | AGAAAGTAAATTTTTCATAG+AGG | - | chr3_1:70683243-70683262 | None:intergenic | 20.0% |
| !! | TGAAAAATTTACTTTCTGAT+AGG | + | chr3_1:70683246-70683265 | Msa0372300:CDS | 20.0% |
| !! | TTATAGTGAAGATTTCAAAA+GGG | - | chr3_1:70683842-70683861 | None:intergenic | 20.0% |
| !! | CTATAAAGATAAAAAGATAG+AGG | - | chr3_1:70683955-70683974 | None:intergenic | 20.0% |
| !! | TCTCTTCATAAATATTCATA+GGG | - | chr3_1:70683998-70684017 | None:intergenic | 20.0% |
| !! | ATCTCTTCATAAATATTCAT+AGG | - | chr3_1:70683999-70684018 | None:intergenic | 20.0% |
| !! | TTCTAGATAATCTTGTAATT+TGG | - | chr3_1:70684615-70684634 | None:intergenic | 20.0% |
| !!! | GCGAAAATAATAAAAAGTAT+TGG | - | chr3_1:70684654-70684673 | None:intergenic | 20.0% |
| !! | TCTATAATTTCATGTTTGTT+AGG | - | chr3_1:70684874-70684893 | None:intergenic | 20.0% |
| !! | ATATTTGGAAATTAATGAGT+TGG | - | chr3_1:70685043-70685062 | None:intergenic | 20.0% |
| !!! | AGAAAGTATTAGGAAATATT+TGG | - | chr3_1:70685058-70685077 | None:intergenic | 20.0% |
| !!! | TTTTACTAGGCAAATATATT+AGG | + | chr3_1:70685212-70685231 | Msa0372300:intron | 20.0% |
| !! | ATACAAAACAATCTACTATT+TGG | - | chr3_1:70685384-70685403 | None:intergenic | 20.0% |
| !! | GAGTATATTATAATTAGAGA+AGG | - | chr3_1:70685543-70685562 | None:intergenic | 20.0% |
| !! | CTAATTATAATATACTCTAC+AGG | + | chr3_1:70685546-70685565 | Msa0372300:intron | 20.0% |
| !! | TAAAATGATCAAACAAAGAT+CGG | - | chr3_1:70685652-70685671 | None:intergenic | 20.0% |
| !!! | ATTTTTGTATTTGTACAAGA+TGG | + | chr3_1:70685767-70685786 | Msa0372300:intron | 20.0% |
| !! | TATTTGAACAATATTCATAC+GGG | - | chr3_1:70686025-70686044 | None:intergenic | 20.0% |
| !!! | TTATGATTTTGTTTCAGATT+AGG | - | chr3_1:70686106-70686125 | None:intergenic | 20.0% |
| !! | ATGTTAAAAACAATGAAACA+CGG | - | chr3_1:70686334-70686353 | None:intergenic | 20.0% |
| !!! | ATTTTCTATGATACTAAGAT+TGG | + | chr3_1:70686984-70687003 | Msa0372300:three_prime_UTR | 20.0% |
| ! | GCAACAACTTGAAATATAAT+AGG | - | chr3_1:70682331-70682350 | None:intergenic | 25.0% |
| ! | TTTCAAAGAAAGAAGCAAAA+GGG | - | chr3_1:70682492-70682511 | None:intergenic | 25.0% |
| !! | TTTTCAAAGAAAGAAGCAAA+AGG | - | chr3_1:70682493-70682512 | None:intergenic | 25.0% |
| ! | ATTATGCTACATAAGCAAAA+GGG | - | chr3_1:70682531-70682550 | None:intergenic | 25.0% |
| ! | AATTATGCTACATAAGCAAA+AGG | - | chr3_1:70682532-70682551 | None:intergenic | 25.0% |
| ! | AGAATGGAACAATTATTTGT+CGG | - | chr3_1:70682801-70682820 | None:intergenic | 25.0% |
| ! | GATACTTTATCATCAGATAA+TGG | + | chr3_1:70683326-70683345 | Msa0372300:CDS | 25.0% |
| ! | TGGTAAATCTTCATGATATA+TGG | + | chr3_1:70683790-70683809 | Msa0372300:intron | 25.0% |
| ! | GTTATAGTGAAGATTTCAAA+AGG | - | chr3_1:70683843-70683862 | None:intergenic | 25.0% |
| !!! | ATAATAAAAAGTATTGGTCC+TGG | - | chr3_1:70684648-70684667 | None:intergenic | 25.0% |
| ! | AAGGTTAATCTGTATGTAAA+TGG | + | chr3_1:70684837-70684856 | Msa0372300:intron | 25.0% |
| !! | AATTCTGTAATAACCTTTTC+TGG | - | chr3_1:70684929-70684948 | None:intergenic | 25.0% |
| ! | GGTTTATGATAAAAACATCA+TGG | - | chr3_1:70685010-70685029 | None:intergenic | 25.0% |
| !!! | AAACTATCACAGAAAGTATT+AGG | - | chr3_1:70685068-70685087 | None:intergenic | 25.0% |
| ! | TATAAATGTGACAACTTACT+AGG | + | chr3_1:70685165-70685184 | Msa0372300:intron | 25.0% |
| ! | ATGTAACAAATAACTTGAGA+TGG | - | chr3_1:70685287-70685306 | None:intergenic | 25.0% |
| !! | TTTAGAGCGTTATTTAAGAA+AGG | - | chr3_1:70685311-70685330 | None:intergenic | 25.0% |
| !! | TCTCAGTTTCTTTAGTTTAT+AGG | - | chr3_1:70685353-70685372 | None:intergenic | 25.0% |
| !!! | GATTGTTTTGTATTTCTCTT+CGG | + | chr3_1:70685391-70685410 | Msa0372300:intron | 25.0% |
| ! | TCTCTTTCAATAATAGTTTC+AGG | - | chr3_1:70685434-70685453 | None:intergenic | 25.0% |
| !!! | CATTTTAGTGTTTTCAAAAC+CGG | + | chr3_1:70685665-70685684 | Msa0372300:intron | 25.0% |
| ! | ATTTGAACAATATTCATACG+GGG | - | chr3_1:70686024-70686043 | None:intergenic | 25.0% |
| !!! | AGAATTTGCTCTTTGAAATT+TGG | + | chr3_1:70686138-70686157 | Msa0372300:intron | 25.0% |
| !!! | GAATTTGCTCTTTGAAATTT+GGG | + | chr3_1:70686139-70686158 | Msa0372300:intron | 25.0% |
| ! | TTTAGCAAGAATTGGAATAA+AGG | + | chr3_1:70686175-70686194 | Msa0372300:intron | 25.0% |
| ! | TTGAATGTAATCACATTCAT+TGG | - | chr3_1:70686259-70686278 | None:intergenic | 25.0% |
| !!! | TTCATTGTTTTTAACATGAG+TGG | + | chr3_1:70686337-70686356 | Msa0372300:intron | 25.0% |
| ! | GATTATTGTAACAAGTTACT+AGG | - | chr3_1:70686451-70686470 | None:intergenic | 25.0% |
| ! | GACTTATTCATAAAACATGA+TGG | - | chr3_1:70686636-70686655 | None:intergenic | 25.0% |
| !!! | ACCAGTTTTTCAAAACTATA+AGG | + | chr3_1:70686929-70686948 | Msa0372300:three_prime_UTR | 25.0% |
| !!! | CCAGTTTTTCAAAACTATAA+GGG | + | chr3_1:70686930-70686949 | Msa0372300:three_prime_UTR | 25.0% |
| ! | TAAATATATCTGAAGAGTGA+AGG | + | chr3_1:70687106-70687125 | Msa0372300:three_prime_UTR | 25.0% |
| TTCAAAGAAAGAAGCAAAAG+GGG | - | chr3_1:70682491-70682510 | None:intergenic | 30.0% | |
| TTATATCATCTTCTACCCTA+TGG | - | chr3_1:70682590-70682609 | None:intergenic | 30.0% | |
| !! | TTCCATTCTAAAATCGAACT+CGG | + | chr3_1:70682812-70682831 | Msa0372300:intron | 30.0% |
| ! | TTTTAGACATGTGCTAGAAA+TGG | + | chr3_1:70683035-70683054 | Msa0372300:intron | 30.0% |
| ATTTGTAGAGATGAAAGACT+AGG | - | chr3_1:70683101-70683120 | None:intergenic | 30.0% | |
| ATAATAAGCCTTCAACTTCA+AGG | + | chr3_1:70683357-70683376 | Msa0372300:CDS | 30.0% | |
| TTATGCTGTTCTCATAGTAA+TGG | + | chr3_1:70683518-70683537 | Msa0372300:intron | 30.0% | |
| ATCTTCAAATAAGCTTGTCA+TGG | - | chr3_1:70684039-70684058 | None:intergenic | 30.0% | |
| GTAAAGTGGTTTAGTATCAA+AGG | + | chr3_1:70684336-70684355 | Msa0372300:CDS | 30.0% | |
| !!! | GAAATTTTCAAGAGTGTTAC+TGG | - | chr3_1:70684405-70684424 | None:intergenic | 30.0% |
| TCTAATATGTAAGTTTGACG+AGG | - | chr3_1:70684545-70684564 | None:intergenic | 30.0% | |
| ! | ATCTAGAACATTTAAGTTCC+AGG | + | chr3_1:70684627-70684646 | Msa0372300:intron | 30.0% |
| TTCGCTTTGCTTTGATTATA+AGG | + | chr3_1:70684669-70684688 | Msa0372300:intron | 30.0% | |
| ! | CTTTCTGTGATAGTTTTTCT+AGG | + | chr3_1:70685072-70685091 | Msa0372300:intron | 30.0% |
| TATAATTAGAGAAGGCAGTT+GGG | - | chr3_1:70685535-70685554 | None:intergenic | 30.0% | |
| TTATAATTAGAGAAGGCAGT+TGG | - | chr3_1:70685536-70685555 | None:intergenic | 30.0% | |
| ATAATATACTCTACAGGATC+TGG | + | chr3_1:70685552-70685571 | Msa0372300:intron | 30.0% | |
| TTGAAGCAATGATAGATGAA+AGG | - | chr3_1:70685890-70685909 | None:intergenic | 30.0% | |
| TAAGGGAACTAAAGTTACTT+TGG | - | chr3_1:70685952-70685971 | None:intergenic | 30.0% | |
| ! | ACTACCATTCAACGATTTTA+GGG | - | chr3_1:70686076-70686095 | None:intergenic | 30.0% |
| ! | TACTACCATTCAACGATTTT+AGG | - | chr3_1:70686077-70686096 | None:intergenic | 30.0% |
| ! | TGAAATTTGGGATTTACCAA+TGG | + | chr3_1:70686151-70686170 | Msa0372300:intron | 30.0% |
| CAACGATTGTCAAATTGTAT+CGG | + | chr3_1:70686219-70686238 | Msa0372300:intron | 30.0% | |
| AATGAACAGGAAAATTCACA+GGG | - | chr3_1:70686385-70686404 | None:intergenic | 30.0% | |
| TAATGAACAGGAAAATTCAC+AGG | - | chr3_1:70686386-70686405 | None:intergenic | 30.0% | |
| AGTAGAAGAGTTTAATGAAC+AGG | - | chr3_1:70686398-70686417 | None:intergenic | 30.0% | |
| CTAGGTAATTATCATGTCTA+TGG | - | chr3_1:70686433-70686452 | None:intergenic | 30.0% | |
| ! | TACAATAATCACTTGTTAGC+TGG | + | chr3_1:70686461-70686480 | Msa0372300:intron | 30.0% |
| AATAGAATATATGCGCAAAC+AGG | - | chr3_1:70686588-70686607 | None:intergenic | 30.0% | |
| AGTGGATAATGATCTTACTA+TGG | - | chr3_1:70686611-70686630 | None:intergenic | 30.0% | |
| ! | TCATAAAACATGATGGAAAG+TGG | - | chr3_1:70686629-70686648 | None:intergenic | 30.0% |
| TTTCAACATTCACTGGATTT+GGG | + | chr3_1:70686720-70686739 | Msa0372300:CDS | 30.0% | |
| TCCTAATGGAATATATCAGA+TGG | + | chr3_1:70686765-70686784 | Msa0372300:CDS | 30.0% | |
| CCTAATGGAATATATCAGAT+GGG | + | chr3_1:70686766-70686785 | Msa0372300:CDS | 30.0% | |
| ATATCAGATGGGAAACAAAT+AGG | + | chr3_1:70686777-70686796 | Msa0372300:CDS | 30.0% | |
| !!! | CCCTTATAGTTTTGAAAAAC+TGG | - | chr3_1:70686933-70686952 | None:intergenic | 30.0% |
| !!! | CATGGTGGAATCAAATTTTT+TGG | - | chr3_1:70687026-70687045 | None:intergenic | 30.0% |
| ! | GTTTAAAATACTACTGCACA+TGG | - | chr3_1:70687044-70687063 | None:intergenic | 30.0% |
| TCACCTGAATCTAACTTTGA+TGG | + | chr3_1:70682379-70682398 | Msa0372300:exon | 35.0% | |
| TCTCCATCAAAGTTAGATTC+AGG | - | chr3_1:70682385-70682404 | None:intergenic | 35.0% | |
| GAATCTAACTTTGATGGAGA+AGG | + | chr3_1:70682385-70682404 | Msa0372300:exon | 35.0% | |
| AGAGAAGAATCTGACATCAT+TGG | - | chr3_1:70682440-70682459 | None:intergenic | 35.0% | |
| TTCTTCTCTTCTTCATCATC+AGG | + | chr3_1:70682451-70682470 | Msa0372300:CDS | 35.0% | |
| ! | TAGATCAAATGGGTTTCCAT+TGG | + | chr3_1:70682558-70682577 | Msa0372300:intron | 35.0% |
| !! | TTTCCATTGGTTTGAACCAT+AGG | + | chr3_1:70682571-70682590 | Msa0372300:intron | 35.0% |
| !! | TTCCATTGGTTTGAACCATA+GGG | + | chr3_1:70682572-70682591 | Msa0372300:intron | 35.0% |
| TCGTAATCCTAAGTTTGGTT+TGG | + | chr3_1:70682712-70682731 | Msa0372300:intron | 35.0% | |
| CTTAACTCCAAACCAAACTT+AGG | - | chr3_1:70682722-70682741 | None:intergenic | 35.0% | |
| CTTAACTCATAGCCAAACTT+GGG | - | chr3_1:70682772-70682791 | None:intergenic | 35.0% | |
| ACTTAACTCATAGCCAAACT+TGG | - | chr3_1:70682773-70682792 | None:intergenic | 35.0% | |
| !! | AACCGAGTTCGATTTTAGAA+TGG | - | chr3_1:70682817-70682836 | None:intergenic | 35.0% |
| TGTTAATTTCACAGTCCAGA+AGG | + | chr3_1:70683075-70683094 | Msa0372300:intron | 35.0% | |
| CATCTCTACAAATACCAACA+AGG | + | chr3_1:70683108-70683127 | Msa0372300:CDS | 35.0% | |
| TTTCATAGAGGACTTGACTT+TGG | - | chr3_1:70683231-70683250 | None:intergenic | 35.0% | |
| TACTTTCTGATAGGAGCTTT+AGG | + | chr3_1:70683255-70683274 | Msa0372300:CDS | 35.0% | |
| ! | ATCATCAGATAATGGTCCTT+TGG | + | chr3_1:70683334-70683353 | Msa0372300:CDS | 35.0% |
| GTTGAAGGCTTATTATCCAA+AGG | - | chr3_1:70683353-70683372 | None:intergenic | 35.0% | |
| GAATTAGCAATTGGAGTAAC+CGG | - | chr3_1:70683440-70683459 | None:intergenic | 35.0% | |
| GTTACTCCAATTGCTAATTC+AGG | + | chr3_1:70683440-70683459 | Msa0372300:CDS | 35.0% | |
| TGTTGCAGGTCTTAAATTAG+CGG | - | chr3_1:70683678-70683697 | None:intergenic | 35.0% | |
| AGTGATTCAATGCAAGAGAT+TGG | + | chr3_1:70683770-70683789 | Msa0372300:CDS | 35.0% | |
| AGTGCAAATGTAATTGCGAT+GGG | - | chr3_1:70684083-70684102 | None:intergenic | 35.0% | |
| AAGTGCAAATGTAATTGCGA+TGG | - | chr3_1:70684084-70684103 | None:intergenic | 35.0% | |
| CTTCAATGACTGAAACCAAA+CGG | - | chr3_1:70684182-70684201 | None:intergenic | 35.0% | |
| !! | TTCTTCTTCTGGAATATCCT+CGG | - | chr3_1:70684211-70684230 | None:intergenic | 35.0% |
| ! | AGCAGTTTGTAGGATTTGTT+TGG | + | chr3_1:70684230-70684249 | Msa0372300:CDS | 35.0% |
| ! | AGTTTGTAGGATTTGTTTGG+TGG | + | chr3_1:70684233-70684252 | Msa0372300:CDS | 35.0% |
| AGAGAGCAGTAACTAATTAC+AGG | + | chr3_1:70684469-70684488 | Msa0372300:CDS | 35.0% | |
| AAGCATGACAAGAACATTGT+AGG | - | chr3_1:70684574-70684593 | None:intergenic | 35.0% | |
| TTCTTGTCATGCTTACTTGT+TGG | + | chr3_1:70684580-70684599 | Msa0372300:intron | 35.0% | |
| ATCTTGTAATTTGGACCACA+AGG | - | chr3_1:70684606-70684625 | None:intergenic | 35.0% | |
| CTTTGCTTTGATTATAAGGC+TGG | + | chr3_1:70684673-70684692 | Msa0372300:intron | 35.0% | |
| TTGAGCGATTTCTCTTCATT+AGG | - | chr3_1:70684777-70684796 | None:intergenic | 35.0% | |
| AGAGAAATCGCTCAAAGATA+TGG | + | chr3_1:70684782-70684801 | Msa0372300:intron | 35.0% | |
| ATTCACTGAACGAGTCAAAA+AGG | + | chr3_1:70684818-70684837 | Msa0372300:intron | 35.0% | |
| ATCTGTATGTAAATGGCTGT+TGG | + | chr3_1:70684844-70684863 | Msa0372300:intron | 35.0% | |
| TCTGTATGTAAATGGCTGTT+GGG | + | chr3_1:70684845-70684864 | Msa0372300:intron | 35.0% | |
| ! | TAATGAGTTGGACCGAAATA+TGG | - | chr3_1:70685031-70685050 | None:intergenic | 35.0% |
| ACATAATTATGCGATGTTGG+AGG | - | chr3_1:70685128-70685147 | None:intergenic | 35.0% | |
| TCCAACATCGCATAATTATG+TGG | + | chr3_1:70685127-70685146 | Msa0372300:intron | 35.0% | |
| TCCACATAATTATGCGATGT+TGG | - | chr3_1:70685131-70685150 | None:intergenic | 35.0% | |
| !!! | GACTACATTTTTTTCCCACA+TGG | - | chr3_1:70685462-70685481 | None:intergenic | 35.0% |
| ATAATTAGAGAAGGCAGTTG+GGG | - | chr3_1:70685534-70685553 | None:intergenic | 35.0% | |
| TTATACAACTAGTGACCCAT+TGG | - | chr3_1:70685733-70685752 | None:intergenic | 35.0% | |
| !! | TCAAAGATTTCTAGTGTACC+AGG | + | chr3_1:70685803-70685822 | Msa0372300:intron | 35.0% |
| ATCTATCATTGCTTCAACCA+TGG | + | chr3_1:70685893-70685912 | Msa0372300:CDS | 35.0% | |
| TCTATCATTGCTTCAACCAT+GGG | + | chr3_1:70685894-70685913 | Msa0372300:CDS | 35.0% | |
| ! | AAGTTACTTTGGCATGCTAA+GGG | - | chr3_1:70685941-70685960 | None:intergenic | 35.0% |
| ! | AAAGTTACTTTGGCATGCTA+AGG | - | chr3_1:70685942-70685961 | None:intergenic | 35.0% |
| !!! | TTTTTGGGCCGATTAGTTTT+TGG | + | chr3_1:70685991-70686010 | Msa0372300:intron | 35.0% |
| GTTCATGGCCAAAAACTAAT+CGG | - | chr3_1:70686002-70686021 | None:intergenic | 35.0% | |
| ! | CTACCATTCAACGATTTTAG+GGG | - | chr3_1:70686075-70686094 | None:intergenic | 35.0% |
| CCAATTCTTGCTAAATCCAT+TGG | - | chr3_1:70686170-70686189 | None:intergenic | 35.0% | |
| ! | CCAATGGATTTAGCAAGAAT+TGG | + | chr3_1:70686167-70686186 | Msa0372300:intron | 35.0% |
| ATCGTTGTAAAGTGAAATGC+AGG | - | chr3_1:70686206-70686225 | None:intergenic | 35.0% | |
| GTTCTTCTTTCAACATTCAC+TGG | + | chr3_1:70686713-70686732 | Msa0372300:CDS | 35.0% | |
| CTTTCAACATTCACTGGATT+TGG | + | chr3_1:70686719-70686738 | Msa0372300:CDS | 35.0% | |
| CCCATCTGATATATTCCATT+AGG | - | chr3_1:70686769-70686788 | None:intergenic | 35.0% | |
| TAAAATACTACTGCACATGG+TGG | - | chr3_1:70687041-70687060 | None:intergenic | 35.0% | |
| AGAATGCAGACATATACTCT+AGG | + | chr3_1:70687067-70687086 | Msa0372300:three_prime_UTR | 35.0% | |
| CTAACTTTGATGGAGAAGGA+AGG | + | chr3_1:70682389-70682408 | Msa0372300:exon | 40.0% | |
| TACCCTATGGTTCAAACCAA+TGG | - | chr3_1:70682577-70682596 | None:intergenic | 40.0% | |
| GTTAATCCTCTCAGAAGAAG+AGG | + | chr3_1:70682685-70682704 | Msa0372300:intron | 40.0% | |
| GACACTCGTAATCCTAAGTT+TGG | + | chr3_1:70682707-70682726 | Msa0372300:intron | 40.0% | |
| GGAGTTAAGTAAAGTCTGAC+TGG | + | chr3_1:70682733-70682752 | Msa0372300:intron | 40.0% | |
| TCATCTTCTACCAAGACAGA+TGG | + | chr3_1:70683149-70683168 | Msa0372300:CDS | 40.0% | |
| TAATGTAGGACCATCTGTCT+TGG | - | chr3_1:70683162-70683181 | None:intergenic | 40.0% | |
| !! | GAACCTGGACTTGATAATGT+AGG | - | chr3_1:70683176-70683195 | None:intergenic | 40.0% |
| GACTTGACTTTGGTAGAATG+TGG | - | chr3_1:70683221-70683240 | None:intergenic | 40.0% | |
| GAATGAGACCTTGAAGTTGA+AGG | - | chr3_1:70683368-70683387 | None:intergenic | 40.0% | |
| TCTGCACCTGAATTAGCAAT+TGG | - | chr3_1:70683449-70683468 | None:intergenic | 40.0% | |
| TGTACATGGAAGACATGTAG+AGG | + | chr3_1:70683472-70683491 | Msa0372300:CDS | 40.0% | |
| GTACATGGAAGACATGTAGA+GGG | + | chr3_1:70683473-70683492 | Msa0372300:CDS | 40.0% | |
| ! | GACTCGATCATTTTCAGTTC+CGG | + | chr3_1:70683640-70683659 | Msa0372300:CDS | 40.0% |
| ! | TTAGCGGCTTTGACATTAAC+CGG | - | chr3_1:70683662-70683681 | None:intergenic | 40.0% |
| TAAGACCTGCAACAGATTCT+AGG | + | chr3_1:70683684-70683703 | Msa0372300:CDS | 40.0% | |
| TCTCTTGCATTGAATCACTG+CGG | - | chr3_1:70683769-70683788 | None:intergenic | 40.0% | |
| CTACAAACTGCTTCTTCTTC+TGG | - | chr3_1:70684222-70684241 | None:intergenic | 40.0% | |
| CAGAAGAAGAAGCAGTTTGT+AGG | + | chr3_1:70684220-70684239 | Msa0372300:CDS | 40.0% | |
| ! | AGAGTGTTACTGGAAGATTC+CGG | - | chr3_1:70684395-70684414 | None:intergenic | 40.0% |
| ! | TATAAGGCTGGTTGTAGTCT+AGG | + | chr3_1:70684685-70684704 | Msa0372300:intron | 40.0% |
| ! | ATAAGGCTGGTTGTAGTCTA+GGG | + | chr3_1:70684686-70684705 | Msa0372300:intron | 40.0% |
| CAAAGATATGGACGAAAACC+TGG | + | chr3_1:70684794-70684813 | Msa0372300:intron | 40.0% | |
| GAAATGTGTGTCTATGCATG+CGG | + | chr3_1:70684901-70684920 | Msa0372300:intron | 40.0% | |
| AAATGTGTGTCTATGCATGC+GGG | + | chr3_1:70684902-70684921 | Msa0372300:intron | 40.0% | |
| TTGAAAGAGAACATGCCATG+TGG | + | chr3_1:70685444-70685463 | Msa0372300:intron | 40.0% | |
| TGAAAGAGAACATGCCATGT+GGG | + | chr3_1:70685445-70685464 | Msa0372300:intron | 40.0% | |
| TAATTAGAGAAGGCAGTTGG+GGG | - | chr3_1:70685533-70685552 | None:intergenic | 40.0% | |
| ATGCTAACCAAGACAAGTAC+TGG | - | chr3_1:70685587-70685606 | None:intergenic | 40.0% | |
| ! | GCTTGCATACTTTTGCTTTC+TGG | + | chr3_1:70685607-70685626 | Msa0372300:intron | 40.0% |
| ! | TGCATACTTTTGCTTTCTGG+AGG | + | chr3_1:70685610-70685629 | Msa0372300:intron | 40.0% |
| ! | TAGTGTTTTCAAAACCGGAC+CGG | + | chr3_1:70685670-70685689 | Msa0372300:intron | 40.0% |
| AGTGACTCAGTACTTTGACT+GGG | - | chr3_1:70685703-70685722 | None:intergenic | 40.0% | |
| AGTGTACCAGGTTTCAGATT+TGG | + | chr3_1:70685815-70685834 | Msa0372300:intron | 40.0% | |
| GTGTACCAGGTTTCAGATTT+GGG | + | chr3_1:70685816-70685835 | Msa0372300:intron | 40.0% | |
| ! | TTGCCTTTCTCCTGCATTTT+AGG | + | chr3_1:70685861-70685880 | Msa0372300:CDS | 40.0% |
| AGACCTAAAATGCAGGAGAA+AGG | - | chr3_1:70685867-70685886 | None:intergenic | 40.0% | |
| TGAAAGGAGACCTAAAATGC+AGG | - | chr3_1:70685874-70685893 | None:intergenic | 40.0% | |
| CAATATTCATACGGGGTTCA+TGG | - | chr3_1:70686017-70686036 | None:intergenic | 40.0% | |
| !! | CACATTCATTGGTGTCATGT+CGG | - | chr3_1:70686248-70686267 | None:intergenic | 40.0% |
| !!! | TTTTTTTGTTGGCAGTGAGC+AGG | + | chr3_1:70686518-70686537 | Msa0372300:intron | 40.0% |
| AGTGAGCAGGAGTTACATAT+GGG | + | chr3_1:70686531-70686550 | Msa0372300:intron | 40.0% | |
| CTTGTAGCTTAATGTGAGTG+CGG | + | chr3_1:70686682-70686701 | Msa0372300:intron | 40.0% | |
| ! | TAATGTGAGTGCGGTTTTCT+CGG | + | chr3_1:70686691-70686710 | Msa0372300:CDS | 40.0% |
| CAGCATGAATTCTCTCCTAA+TGG | + | chr3_1:70686751-70686770 | Msa0372300:CDS | 40.0% | |
| GTGGTATCAACTACAGTCAT+TGG | - | chr3_1:70686901-70686920 | None:intergenic | 40.0% | |
| ! | ATGACTGTAGTTGATACCAC+TGG | + | chr3_1:70686901-70686920 | Msa0372300:exon | 40.0% |
| ! | GAAAAACTGGTCTAAACCAG+TGG | - | chr3_1:70686920-70686939 | None:intergenic | 40.0% |
| !! | AAGATTGGCATTCTAGAGTG+TGG | + | chr3_1:70686999-70687018 | Msa0372300:three_prime_UTR | 40.0% |
| CACTCTCGTAATCCCAAGTT+TGG | + | chr3_1:70682757-70682776 | Msa0372300:intron | 45.0% | |
| AGATGAAAGACTAGGCCTTC+TGG | - | chr3_1:70683093-70683112 | None:intergenic | 45.0% | |
| ! | GCACTTTCTAGTGTCCTTGT+TGG | - | chr3_1:70683125-70683144 | None:intergenic | 45.0% |
| GGTCCTACATTATCAAGTCC+AGG | + | chr3_1:70683170-70683189 | Msa0372300:CDS | 45.0% | |
| ACTTTGGTAGAATGTGGCCT+TGG | - | chr3_1:70683215-70683234 | None:intergenic | 45.0% | |
| GTTCCCTTCATCGAGTAAAG+CGG | + | chr3_1:70683403-70683422 | Msa0372300:CDS | 45.0% | |
| TCAGGTGCAGAGAATGTACA+TGG | + | chr3_1:70683458-70683477 | Msa0372300:CDS | 45.0% | |
| GAAACACCATCAGTAGTTGC+TGG | - | chr3_1:70683743-70683762 | None:intergenic | 45.0% | |
| CTCTTGCATTGAATCACTGC+GGG | - | chr3_1:70683768-70683787 | None:intergenic | 45.0% | |
| ! | TTGCATTTTGTCACGCCGTT+TGG | + | chr3_1:70684164-70684183 | Msa0372300:intron | 45.0% |
| AGTCATTGAAGATGCTTCCG+AGG | + | chr3_1:70684191-70684210 | Msa0372300:intron | 45.0% | |
| ! | GATTTGTTTGGTGGAGCTTG+CGG | + | chr3_1:70684242-70684261 | Msa0372300:CDS | 45.0% |
| ACCAAGACTGTGCAGTAAAG+TGG | + | chr3_1:70684322-70684341 | Msa0372300:CDS | 45.0% | |
| ACCACTTTACTGCACAGTCT+TGG | - | chr3_1:70684326-70684345 | None:intergenic | 45.0% | |
| AACGTATGCCGAACAACAGT+CGG | - | chr3_1:70684435-70684454 | None:intergenic | 45.0% | |
| !! | ATGCTTACTTGTTGGCCTTG+TGG | + | chr3_1:70684588-70684607 | Msa0372300:intron | 45.0% |
| ! | GGTTGTAGTCTAGGGTCATT+AGG | + | chr3_1:70684694-70684713 | Msa0372300:intron | 45.0% |
| TGACTCGTTCAGTGAATACC+AGG | - | chr3_1:70684815-70684834 | None:intergenic | 45.0% | |
| AATTAGAGAAGGCAGTTGGG+GGG | - | chr3_1:70685532-70685551 | None:intergenic | 45.0% | |
| TATACTCTACAGGATCTGGC+AGG | + | chr3_1:70685556-70685575 | Msa0372300:intron | 45.0% | |
| GGATGTACCAGTACTTGTCT+TGG | + | chr3_1:70685577-70685596 | Msa0372300:CDS | 45.0% | |
| ! | TTGCTTTCTGGAGGAACTAC+TGG | + | chr3_1:70685619-70685638 | Msa0372300:intron | 45.0% |
| CAGTGACTCAGTACTTTGAC+TGG | - | chr3_1:70685704-70685723 | None:intergenic | 45.0% | |
| !! | CAGTCAAAGTACTGAGTCAC+TGG | + | chr3_1:70685702-70685721 | Msa0372300:intron | 45.0% |
| TGAGTCACTGGTCAAACCAA+TGG | + | chr3_1:70685714-70685733 | Msa0372300:intron | 45.0% | |
| GAGTCACTGGTCAAACCAAT+GGG | + | chr3_1:70685715-70685734 | Msa0372300:intron | 45.0% | |
| GCAGGAGAAAGGCAATGAAA+TGG | - | chr3_1:70685856-70685875 | None:intergenic | 45.0% | |
| GAAGAAAGCGAGTTTACCCA+TGG | - | chr3_1:70685913-70685932 | None:intergenic | 45.0% | |
| !! | TCAACGATTTTAGGGGCTCA+AGG | - | chr3_1:70686068-70686087 | None:intergenic | 45.0% |
| GAGCCCCTAAAATCGTTGAA+TGG | + | chr3_1:70686069-70686088 | Msa0372300:intron | 45.0% | |
| CAGTGAGCAGGAGTTACATA+TGG | + | chr3_1:70686530-70686549 | Msa0372300:intron | 45.0% | |
| ACAGGATGACAAATGCGAAC+TGG | - | chr3_1:70686570-70686589 | None:intergenic | 45.0% | |
| GACAACCACATCAACTGCAA+AGG | + | chr3_1:70686858-70686877 | Msa0372300:CDS | 45.0% | |
| ! | TGCATCCTTTGCAGTTGATG+TGG | - | chr3_1:70686866-70686885 | None:intergenic | 45.0% |
| !!! | ATTAATTTTTTATCATAAAA+AGG | - | chr3_1:70683865-70683884 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTTTTACT+AGG | + | chr3_1:70685199-70685218 | Msa0372300:intron | 5.0% |
| !! | AAATGAAAAAATATAATTAA+GGG | - | chr3_1:70685969-70685988 | None:intergenic | 5.0% |
| !! | AAAATGAAAAAATATAATTA+AGG | - | chr3_1:70685970-70685989 | None:intergenic | 5.0% |
| GAGTGTCCTCTTCTTCTGAG+AGG | - | chr3_1:70682694-70682713 | None:intergenic | 50.0% | |
| TCAAGTCCAGGTTCCACTAG+AGG | + | chr3_1:70683182-70683201 | Msa0372300:CDS | 50.0% | |
| ! | TTGGTAGAATGTGGCCTTGG+TGG | - | chr3_1:70683212-70683231 | None:intergenic | 50.0% |
| TAAAGCGGCGCATTCGTTAC+CGG | + | chr3_1:70683418-70683437 | Msa0372300:CDS | 50.0% | |
| CATGGAAGACATGTAGAGGG+TGG | + | chr3_1:70683476-70683495 | Msa0372300:CDS | 50.0% | |
| AGACGCCTAGAATCTGTTGC+AGG | - | chr3_1:70683692-70683711 | None:intergenic | 50.0% | |
| TGCAACAGATTCTAGGCGTC+TGG | + | chr3_1:70683691-70683710 | Msa0372300:CDS | 50.0% | |
| AGGGGGAGATACTCTTAGGA+TGG | + | chr3_1:70684266-70684285 | Msa0372300:CDS | 50.0% | |
| !! | AGGATGGACTGCAGTTGCAA+AGG | + | chr3_1:70684282-70684301 | Msa0372300:CDS | 50.0% |
| GACATGTGATGTCTGCAAGC+AGG | + | chr3_1:70684365-70684384 | Msa0372300:CDS | 50.0% | |
| ATGTCTGCAAGCAGGATGTC+CGG | + | chr3_1:70684373-70684392 | Msa0372300:CDS | 50.0% | |
| TATGCATGCGGGACCAGAAA+AGG | + | chr3_1:70684913-70684932 | Msa0372300:intron | 50.0% | |
| ! | CAAGCCTTTTCCCACTGAGT+GGG | + | chr3_1:70684960-70684979 | Msa0372300:intron | 50.0% |
| ! | AAGCCTTTTCCCACTGAGTG+GGG | + | chr3_1:70684961-70684980 | Msa0372300:intron | 50.0% |
| ATTAGAGAAGGCAGTTGGGG+GGG | - | chr3_1:70685531-70685550 | None:intergenic | 50.0% | |
| ACTTTGACTGGGTCGATGAC+CGG | - | chr3_1:70685692-70685711 | None:intergenic | 50.0% | |
| ! | ATGAAATGGCGAGAGCACGT+GGG | - | chr3_1:70685842-70685861 | None:intergenic | 50.0% |
| ! | AATGAAATGGCGAGAGCACG+TGG | - | chr3_1:70685843-70685862 | None:intergenic | 50.0% |
| ! | GCGCCGCTTTACTCGATGAA+GGG | - | chr3_1:70683409-70683428 | None:intergenic | 55.0% |
| ! | TGCGCCGCTTTACTCGATGA+AGG | - | chr3_1:70683410-70683429 | None:intergenic | 55.0% |
| ! | CCATCAGTAGTTGCTGGCTG+TGG | - | chr3_1:70683737-70683756 | None:intergenic | 55.0% |
| CCACAGCCAGCAACTACTGA+TGG | + | chr3_1:70683734-70683753 | Msa0372300:CDS | 55.0% | |
| ! | TGTTTGGTGGAGCTTGCGGA+AGG | + | chr3_1:70684246-70684265 | Msa0372300:CDS | 55.0% |
| ! | GTTTGGTGGAGCTTGCGGAA+GGG | + | chr3_1:70684247-70684266 | Msa0372300:CDS | 55.0% |
| TTTGGTGGAGCTTGCGGAAG+GGG | + | chr3_1:70684248-70684267 | Msa0372300:CDS | 55.0% | |
| CGGAAGGGGGAGATACTCTT+AGG | + | chr3_1:70684262-70684281 | Msa0372300:CDS | 55.0% | |
| ! | CTAGTCCGCCGACTGTTGTT+CGG | + | chr3_1:70684424-70684443 | Msa0372300:CDS | 55.0% |
| GTATGCCGAACAACAGTCGG+CGG | - | chr3_1:70684432-70684451 | None:intergenic | 55.0% | |
| CCACTCAGTGGGAAAAGGCT+TGG | - | chr3_1:70684962-70684981 | None:intergenic | 55.0% | |
| ! | CCAAGCCTTTTCCCACTGAG+TGG | + | chr3_1:70684959-70684978 | Msa0372300:intron | 55.0% |
| ! | CTTTTCCCACTGAGTGGGGT+CGG | + | chr3_1:70684965-70684984 | Msa0372300:intron | 55.0% |
| TTCCTCTGCCTCTAGTGCTC+TGG | + | chr3_1:70685098-70685117 | Msa0372300:intron | 55.0% | |
| ! | GAGGATAGCCAGAGCACTAG+AGG | - | chr3_1:70685109-70685128 | None:intergenic | 55.0% |
| TTAGAGAAGGCAGTTGGGGG+GGG | - | chr3_1:70685530-70685549 | None:intergenic | 55.0% | |
| ! | GTGGGCCCAAATCTGAAACC+TGG | - | chr3_1:70685824-70685843 | None:intergenic | 55.0% |
| GGCAGTCCTCTAGTGGAACC+TGG | - | chr3_1:70683191-70683210 | None:intergenic | 60.0% | |
| ! | CCTTGGTGGCAGTCCTCTAG+TGG | - | chr3_1:70683198-70683217 | None:intergenic | 60.0% |
| CCACTAGAGGACTGCCACCA+AGG | + | chr3_1:70683195-70683214 | Msa0372300:CDS | 60.0% | |
| TTGGTGGAGCTTGCGGAAGG+GGG | + | chr3_1:70684249-70684268 | Msa0372300:CDS | 60.0% | |
| CGACCCCACTCAGTGGGAAA+AGG | - | chr3_1:70684967-70684986 | None:intergenic | 60.0% | |
| TGTAGCCGACCCCACTCAGT+GGG | - | chr3_1:70684973-70684992 | None:intergenic | 60.0% | |
| ATGTAGCCGACCCCACTCAG+TGG | - | chr3_1:70684974-70684993 | None:intergenic | 60.0% | |
| ACTGAGTGGGGTCGGCTACA+TGG | + | chr3_1:70684973-70684992 | Msa0372300:intron | 60.0% | |
| ! | AGCCAGAGCACTAGAGGCAG+AGG | - | chr3_1:70685103-70685122 | None:intergenic | 60.0% |
| TAGAGAAGGCAGTTGGGGGG+GGG | - | chr3_1:70685529-70685548 | None:intergenic | 60.0% | |
| AGAGAAGGCAGTTGGGGGGG+GGG | - | chr3_1:70685528-70685547 | None:intergenic | 65.0% | |
| GACTGGGTCGATGACCGGTC+CGG | - | chr3_1:70685687-70685706 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_1 | gene | 70682321 | 70687139 | 70682321 | ID=Msa0372300;Name=Msa0372300 |
| chr3_1 | mRNA | 70682321 | 70687139 | 70682321 | ID=Msa0372300-mRNA-1;Parent=Msa0372300;Name=Msa0372300-mRNA-1;_AED=0.09;_eAED=0.09;_QI=77|0.85|0.87|1|0.57|0.62|8|235|462 |
| chr3_1 | exon | 70682321 | 70682472 | 70682321 | ID=Msa0372300-mRNA-1:exon:15405;Parent=Msa0372300-mRNA-1 |
| chr3_1 | exon | 70683089 | 70683511 | 70683089 | ID=Msa0372300-mRNA-1:exon:15406;Parent=Msa0372300-mRNA-1 |
| chr3_1 | exon | 70683617 | 70683791 | 70683617 | ID=Msa0372300-mRNA-1:exon:15407;Parent=Msa0372300-mRNA-1 |
| chr3_1 | exon | 70684193 | 70684490 | 70684193 | ID=Msa0372300-mRNA-1:exon:15408;Parent=Msa0372300-mRNA-1 |
| chr3_1 | exon | 70685568 | 70685598 | 70685568 | ID=Msa0372300-mRNA-1:exon:15409;Parent=Msa0372300-mRNA-1 |
| chr3_1 | exon | 70685825 | 70685915 | 70685825 | ID=Msa0372300-mRNA-1:exon:15410;Parent=Msa0372300-mRNA-1 |
| chr3_1 | exon | 70686533 | 70686612 | 70686533 | ID=Msa0372300-mRNA-1:exon:15411;Parent=Msa0372300-mRNA-1 |
| chr3_1 | exon | 70686689 | 70687139 | 70686689 | ID=Msa0372300-mRNA-1:exon:15412;Parent=Msa0372300-mRNA-1 |
| chr3_1 | five_prime_UTR | 70682321 | 70682397 | 70682321 | ID=Msa0372300-mRNA-1:five_prime_utr;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70682398 | 70682472 | 70682398 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70683089 | 70683511 | 70683089 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70683617 | 70683791 | 70683617 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70684193 | 70684490 | 70684193 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70685568 | 70685598 | 70685568 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70685825 | 70685915 | 70685825 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70686533 | 70686612 | 70686533 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | CDS | 70686689 | 70686904 | 70686689 | ID=Msa0372300-mRNA-1:cds;Parent=Msa0372300-mRNA-1 |
| chr3_1 | three_prime_UTR | 70686905 | 70687139 | 70686905 | ID=Msa0372300-mRNA-1:three_prime_utr;Parent=Msa0372300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
