Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0015750 | Msa0450570 | 0.815157 | 1.067497e-51 | -8.615850e-47 |
| Msa0016570 | Msa0450570 | 0.813492 | 2.490207e-51 | -8.615850e-47 |
| Msa0102070 | Msa0450570 | 0.911037 | 9.562299e-83 | -8.615850e-47 |
| Msa0124100 | Msa0450570 | 0.800064 | 1.717100e-48 | -8.615850e-47 |
| Msa0142220 | Msa0450570 | 0.808867 | 2.507584e-50 | -8.615850e-47 |
| Msa0145750 | Msa0450570 | 0.807156 | 5.799639e-50 | -8.615850e-47 |
| Msa0200000 | Msa0450570 | 0.825788 | 3.872697e-54 | -8.615850e-47 |
| Msa0227480 | Msa0450570 | 0.867056 | 1.813049e-65 | -8.615850e-47 |
| Msa0365500 | Msa0450570 | 0.816439 | 5.526262e-52 | -8.615850e-47 |
| Msa0384800 | Msa0450570 | 0.827752 | 1.314846e-54 | -8.615850e-47 |
| Msa0406120 | Msa0450570 | 0.805031 | 1.624420e-49 | -8.615850e-47 |
| Msa0414410 | Msa0450570 | 0.842029 | 3.319147e-58 | -8.615850e-47 |
| Msa0414420 | Msa0450570 | 0.874222 | 7.995552e-68 | -8.615850e-47 |
| Msa0436780 | Msa0450570 | 0.822546 | 2.236198e-53 | -8.615850e-47 |
| Msa0438620 | Msa0450570 | 0.822174 | 2.727271e-53 | -8.615850e-47 |
| Msa0450000 | Msa0450570 | 0.852474 | 4.507833e-61 | -8.615850e-47 |
| Msa0450570 | Msa0451730 | 0.820540 | 6.499344e-53 | -8.615850e-47 |
| Msa0450570 | Msa0452900 | 0.885683 | 6.582980e-72 | -8.615850e-47 |
| Msa0450570 | Msa0453120 | 0.841690 | 4.078789e-58 | -8.615850e-47 |
| Msa0450570 | Msa0459160 | 0.804209 | 2.411220e-49 | -8.615850e-47 |
| Msa0450570 | Msa0491590 | 0.832041 | 1.185230e-55 | -8.615850e-47 |
| Msa0450570 | Msa0506270 | 0.820872 | 5.452284e-53 | -8.615850e-47 |
| Msa0450570 | Msa0534540 | 0.808111 | 3.635959e-50 | -8.615850e-47 |
| Msa0450570 | Msa0564890 | 0.837214 | 5.930156e-57 | -8.615850e-47 |
| Msa0450570 | Msa0596150 | 0.813962 | 1.962429e-51 | -8.615850e-47 |
| Msa0450570 | Msa0639610 | 0.836040 | 1.181438e-56 | -8.615850e-47 |
| Msa0450570 | Msa0678930 | 0.808809 | 2.580695e-50 | -8.615850e-47 |
| Msa0450570 | Msa0720350 | 0.803709 | 3.063300e-49 | -8.615850e-47 |
| Msa0450570 | Msa0726140 | 0.846838 | 1.689267e-59 | -8.615850e-47 |
| Msa0450570 | Msa0729800 | 0.840762 | 7.150334e-58 | -8.615850e-47 |
| Msa0450570 | Msa0733290 | 0.818591 | 1.809909e-52 | -8.615850e-47 |
| Msa0450570 | Msa0743810 | 0.860422 | 2.088113e-63 | -8.615850e-47 |
| Msa0450570 | Msa0745060 | 0.851981 | 6.226815e-61 | -8.615850e-47 |
| Msa0450570 | Msa0767720 | 0.814602 | 1.416947e-51 | -8.615850e-47 |
| Msa0450570 | Msa0777870 | 0.808532 | 2.957457e-50 | -8.615850e-47 |
| Msa0450570 | Msa0783160 | 0.862240 | 5.830316e-64 | -8.615850e-47 |
| Msa0450570 | Msa0787600 | 0.829167 | 5.988529e-55 | -8.615850e-47 |
| Msa0450570 | Msa0808010 | 0.840838 | 6.830127e-58 | -8.615850e-47 |
| Msa0450570 | Msa0808020 | 0.837386 | 5.360839e-57 | -8.615850e-47 |
| Msa0450570 | Msa0811270 | 0.803667 | 3.125493e-49 | -8.615850e-47 |
| Msa0450570 | Msa0825860 | 0.860557 | 1.900507e-63 | -8.615850e-47 |
| Msa0450570 | Msa0846210 | 0.826892 | 2.113780e-54 | -8.615850e-47 |
| Msa0450570 | Msa0846330 | 0.824234 | 9.014600e-54 | -8.615850e-47 |
| Msa0450570 | Msa0846350 | 0.836830 | 7.437025e-57 | -8.615850e-47 |
| Msa0450570 | Msa0848960 | 0.823580 | 1.283256e-53 | -8.615850e-47 |
| Msa0450570 | Msa0858980 | 0.811820 | 5.783227e-51 | -8.615850e-47 |
| Msa0450570 | Msa0865320 | 0.840242 | 9.783285e-58 | -8.615850e-47 |
| Msa0450570 | Msa0872230 | 0.802103 | 6.576626e-49 | -8.615850e-47 |
| Msa0450570 | Msa0885290 | 0.808199 | 3.481881e-50 | -8.615850e-47 |
| Msa0450570 | Msa0888370 | 0.817488 | 3.213517e-52 | -8.615850e-47 |
| Msa0450570 | Msa0896080 | 0.815183 | 1.053488e-51 | -8.615850e-47 |
| Msa0450570 | Msa0952190 | 0.818181 | 2.241078e-52 | -8.615850e-47 |
| Msa0450570 | Msa0981370 | 0.825128 | 5.550114e-54 | -8.615850e-47 |
| Msa0450570 | Msa0989060 | 0.826430 | 2.724604e-54 | -8.615850e-47 |
| Msa0450570 | Msa1016280 | 0.856187 | 3.812027e-62 | -8.615850e-47 |
| Msa0450570 | Msa1025360 | 0.883054 | 6.204466e-71 | -8.615850e-47 |
| Msa0450570 | Msa1025370 | 0.866686 | 2.377517e-65 | -8.615850e-47 |
| Msa0450570 | Msa1044830 | 0.868376 | 6.835335e-66 | -8.615850e-47 |
| Msa0450570 | Msa1044840 | 0.884518 | 1.790537e-71 | -8.615850e-47 |
| Msa0450570 | Msa1060840 | 0.823341 | 1.458988e-53 | -8.615850e-47 |
| Msa0450570 | Msa1092990 | 0.831843 | 1.326558e-55 | -8.615850e-47 |
| Msa0450570 | Msa1100980 | 0.882076 | 1.410755e-70 | -8.615850e-47 |
| Msa0450570 | Msa1109440 | 0.835333 | 1.783595e-56 | -8.615850e-47 |
| Msa0450570 | Msa1121200 | 0.858062 | 1.065793e-62 | -8.615850e-47 |
| Msa0450570 | Msa1135740 | 0.860527 | 1.941668e-63 | -8.615850e-47 |
| Msa0450570 | Msa1146110 | 0.834860 | 2.348162e-56 | -8.615850e-47 |
| Msa0450570 | Msa1149360 | 0.830143 | 3.466022e-55 | -8.615850e-47 |
| Msa0450570 | Msa1173920 | 0.811181 | 7.958427e-51 | -8.615850e-47 |
| Msa0450570 | Msa1187940 | 0.833542 | 5.024821e-56 | -8.615850e-47 |
| Msa0450570 | Msa1187950 | 0.849236 | 3.681633e-60 | -8.615850e-47 |
| Msa0450570 | Msa1192640 | 0.872754 | 2.493800e-67 | -8.615850e-47 |
| Msa0450570 | Msa1193730 | 0.817222 | 3.688908e-52 | -8.615850e-47 |
| Msa0450570 | Msa1269670 | 0.860216 | 2.410712e-63 | -8.615850e-47 |
| Msa0450570 | Msa1270230 | 0.860689 | 1.733394e-63 | -8.615850e-47 |
| Msa0450570 | Msa1270240 | 0.861678 | 8.665314e-64 | -8.615850e-47 |
| Msa0450570 | Msa1270270 | 0.834326 | 3.197248e-56 | -8.615850e-47 |
| Msa0450570 | Msa1283330 | 0.870368 | 1.538913e-66 | -8.615850e-47 |
| Msa0450570 | Msa1285930 | 0.878381 | 2.941778e-69 | -8.615850e-47 |
| Msa0450570 | Msa1287800 | 0.874237 | 7.903536e-68 | -8.615850e-47 |
| Msa0450570 | Msa1287810 | 0.883149 | 5.730292e-71 | -8.615850e-47 |
| Msa0450570 | Msa1289420 | 0.807446 | 5.033902e-50 | -8.615850e-47 |
| Msa0450570 | Msa1289430 | 0.800953 | 1.131406e-48 | -8.615850e-47 |
| Msa0450570 | Msa1307890 | 0.815321 | 9.817477e-52 | -8.615850e-47 |
| Msa0450570 | Msa1314280 | 0.800323 | 1.520923e-48 | -8.615850e-47 |
| Msa0450570 | Msa1320300 | 0.829064 | 6.344566e-55 | -8.615850e-47 |
| Msa0450570 | Msa1340590 | 0.825570 | 4.362039e-54 | -8.615850e-47 |
| Msa0450570 | Msa1342200 | 0.800507 | 1.395319e-48 | -8.615850e-47 |
| Msa0450570 | Msa1344520 | 0.804592 | 2.006328e-49 | -8.615850e-47 |
| Msa0450570 | Msa1382700 | 0.814452 | 1.529903e-51 | -8.615850e-47 |
| Msa0450570 | Msa1397580 | 0.822891 | 1.858107e-53 | -8.615850e-47 |
| Msa0450570 | Msa1404000 | 0.845216 | 4.663767e-59 | -8.615850e-47 |
| Msa0450570 | Msa1415310 | 0.840808 | 6.958269e-58 | -8.615850e-47 |
| Msa0450570 | Msa1422180 | 0.822097 | 2.842485e-53 | -8.615850e-47 |
| Msa0450570 | Msa1433120 | 0.850133 | 2.067349e-60 | -8.615850e-47 |
| Msa0267000 | Msa0450570 | 0.864311 | 1.332641e-64 | -8.615850e-47 |
| Msa0267010 | Msa0450570 | 0.879652 | 1.045871e-69 | -8.615850e-47 |
| Msa0285810 | Msa0450570 | 0.808517 | 2.979786e-50 | -8.615850e-47 |
| Msa0306460 | Msa0450570 | 0.806350 | 8.585137e-50 | -8.615850e-47 |
| Msa0342240 | Msa0450570 | 0.857968 | 1.137033e-62 | -8.615850e-47 |
| Msa0355350 | Msa0450570 | 0.802251 | 6.130922e-49 | -8.615850e-47 |
| Msa0360510 | Msa0450570 | 0.862304 | 5.570836e-64 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 14 sgRNAs with CRISPR-Local
Find 92 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATAGGTTTGTTGATGT+TGG | 0.328111 | 3_3:-36166307 | Msa0450570:CDS |
| AGAGGCTATTGATCAGTTCT+TGG | 0.371669 | 3_3:-36165681 | Msa0450570:CDS |
| AATGTTCTTTGTTGTTCAAA+AGG | 0.386291 | 3_3:-36165615 | Msa0450570:three_prime_UTR |
| GTGATATTAATGTTCAATTG+AGG | 0.478380 | 3_3:-36166276 | Msa0450570:CDS |
| TGATATTAATGTTCAATTGA+GGG | 0.490450 | 3_3:-36166275 | Msa0450570:CDS |
| AATTGAACATTAATATCACT+TGG | 0.491523 | 3_3:+36166280 | None:intergenic |
| TCTGACTGAGTCTAAGAGTT+GGG | 0.492505 | 3_3:-36165714 | Msa0450570:CDS |
| AGGTGCATACCTAGTGAAGA+TGG | 0.527872 | 3_3:+36166243 | None:intergenic |
| ATCTGACTGAGTCTAAGAGT+TGG | 0.540629 | 3_3:-36165715 | Msa0450570:CDS |
| TGTTACTTTCCATCTTCACT+AGG | 0.550768 | 3_3:-36166252 | Msa0450570:intron |
| ATTGAACATTAATATCACTT+GGG | 0.576242 | 3_3:+36166281 | None:intergenic |
| AGTCTAAGAGTTGGGATGTG+AGG | 0.603673 | 3_3:-36165706 | Msa0450570:CDS |
| TTCAAGAGAAACAATACATG+AGG | 0.638964 | 3_3:+36165636 | None:intergenic |
| GAGTTGGGATGTGAGGAAAG+AGG | 0.654443 | 3_3:-36165699 | Msa0450570:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAATTATTATTAATAGGTT+TGG | + | chr3_3:36166062-36166081 | None:intergenic | 15.0% |
| !! | CACAACAAATTATTATTAAT+AGG | + | chr3_3:36166067-36166086 | None:intergenic | 15.0% |
| !! | CAAATTATTATTAATAGGTT+TGG | + | chr3_3:36166062-36166081 | None:intergenic | 15.0% |
| !! | CACAACAAATTATTATTAAT+AGG | + | chr3_3:36166067-36166086 | None:intergenic | 15.0% |
| !! | ATTGAACATTAATATCACTT+GGG | + | chr3_3:36165561-36165580 | None:intergenic | 20.0% |
| !! | AATTGAACATTAATATCACT+TGG | + | chr3_3:36165562-36165581 | None:intergenic | 20.0% |
| !! | TGATATTAATGTTCAATTGA+GGG | - | chr3_3:36165564-36165583 | Msa0450570:three_prime_UTR | 20.0% |
| !! | AAAGTACAAATATGAAATGA+AGG | + | chr3_3:36165619-36165638 | None:intergenic | 20.0% |
| !! | AAATATGTGCACTAAAAATA+TGG | - | chr3_3:36165727-36165746 | Msa0450570:CDS | 20.0% |
| !!! | TGCAATGATTTATGTAATTT+TGG | - | chr3_3:36165981-36166000 | Msa0450570:intron | 20.0% |
| !!! | GCAATGATTTATGTAATTTT+GGG | - | chr3_3:36165982-36166001 | Msa0450570:intron | 20.0% |
| !! | AAACTAATAACGATAATCAA+TGG | + | chr3_3:36166036-36166055 | None:intergenic | 20.0% |
| !! | ATTGAACATTAATATCACTT+GGG | + | chr3_3:36165561-36165580 | None:intergenic | 20.0% |
| !! | AATTGAACATTAATATCACT+TGG | + | chr3_3:36165562-36165581 | None:intergenic | 20.0% |
| !! | TGATATTAATGTTCAATTGA+GGG | - | chr3_3:36165564-36165583 | Msa0450570:three_prime_UTR | 20.0% |
| !! | AAAGTACAAATATGAAATGA+AGG | + | chr3_3:36165619-36165638 | None:intergenic | 20.0% |
| !! | AAATATGTGCACTAAAAATA+TGG | - | chr3_3:36165727-36165746 | Msa0450570:CDS | 20.0% |
| !!! | TGCAATGATTTATGTAATTT+TGG | - | chr3_3:36165981-36166000 | Msa0450570:intron | 20.0% |
| !!! | GCAATGATTTATGTAATTTT+GGG | - | chr3_3:36165982-36166001 | Msa0450570:intron | 20.0% |
| !! | AAACTAATAACGATAATCAA+TGG | + | chr3_3:36166036-36166055 | None:intergenic | 20.0% |
| ! | GTGATATTAATGTTCAATTG+AGG | - | chr3_3:36165563-36165582 | Msa0450570:three_prime_UTR | 25.0% |
| !! | TATGTTTAAGACGTGATATT+CGG | + | chr3_3:36165676-36165695 | None:intergenic | 25.0% |
| ! | TTAAATTGTAGCTAGAACAA+TGG | - | chr3_3:36165816-36165835 | Msa0450570:intron | 25.0% |
| !!! | AATGTTCTTTGTTGTTCAAA+AGG | - | chr3_3:36166224-36166243 | Msa0450570:intron | 25.0% |
| ! | GTGATATTAATGTTCAATTG+AGG | - | chr3_3:36165563-36165582 | Msa0450570:three_prime_UTR | 25.0% |
| !! | TATGTTTAAGACGTGATATT+CGG | + | chr3_3:36165676-36165695 | None:intergenic | 25.0% |
| ! | TTAAATTGTAGCTAGAACAA+TGG | - | chr3_3:36165816-36165835 | Msa0450570:intron | 25.0% |
| !!! | AATGTTCTTTGTTGTTCAAA+AGG | - | chr3_3:36166224-36166243 | Msa0450570:intron | 25.0% |
| !! | TTTCATAGGTTTGTTGATGT+TGG | - | chr3_3:36165532-36165551 | Msa0450570:three_prime_UTR | 30.0% |
| CTATCGATAGATTACTAGTA+GGG | + | chr3_3:36165644-36165663 | None:intergenic | 30.0% | |
| ACTATCGATAGATTACTAGT+AGG | + | chr3_3:36165645-36165664 | None:intergenic | 30.0% | |
| ! | CAAAAGTATAAACATGTCAG+AGG | - | chr3_3:36165696-36165715 | Msa0450570:CDS | 30.0% |
| TGCACTAAAAATATGGTGAA+GGG | - | chr3_3:36165734-36165753 | Msa0450570:CDS | 30.0% | |
| ! | GGTATAAATTTTGCATGTTG+CGG | + | chr3_3:36165937-36165956 | None:intergenic | 30.0% |
| AACAAGAATCACACAACAAA+AGG | + | chr3_3:36166009-36166028 | None:intergenic | 30.0% | |
| TTCAAGAGAAACAATACATG+AGG | + | chr3_3:36166206-36166225 | None:intergenic | 30.0% | |
| !! | TTTCATAGGTTTGTTGATGT+TGG | - | chr3_3:36165532-36165551 | Msa0450570:three_prime_UTR | 30.0% |
| CTATCGATAGATTACTAGTA+GGG | + | chr3_3:36165644-36165663 | None:intergenic | 30.0% | |
| ACTATCGATAGATTACTAGT+AGG | + | chr3_3:36165645-36165664 | None:intergenic | 30.0% | |
| ! | CAAAAGTATAAACATGTCAG+AGG | - | chr3_3:36165696-36165715 | Msa0450570:CDS | 30.0% |
| TGCACTAAAAATATGGTGAA+GGG | - | chr3_3:36165734-36165753 | Msa0450570:CDS | 30.0% | |
| ! | GGTATAAATTTTGCATGTTG+CGG | + | chr3_3:36165937-36165956 | None:intergenic | 30.0% |
| AACAAGAATCACACAACAAA+AGG | + | chr3_3:36166009-36166028 | None:intergenic | 30.0% | |
| TTCAAGAGAAACAATACATG+AGG | + | chr3_3:36166206-36166225 | None:intergenic | 30.0% | |
| !! | TGTTACTTTCCATCTTCACT+AGG | - | chr3_3:36165587-36165606 | Msa0450570:three_prime_UTR | 35.0% |
| GTGCACTAAAAATATGGTGA+AGG | - | chr3_3:36165733-36165752 | Msa0450570:CDS | 35.0% | |
| GCACTAAAAATATGGTGAAG+GGG | - | chr3_3:36165735-36165754 | Msa0450570:CDS | 35.0% | |
| AATTGTAGCTAGAACAATGG+AGG | - | chr3_3:36165819-36165838 | Msa0450570:intron | 35.0% | |
| ! | ATAAATTTTGCATGTTGCGG+CGG | + | chr3_3:36165934-36165953 | None:intergenic | 35.0% |
| !! | TGTTACTTTCCATCTTCACT+AGG | - | chr3_3:36165587-36165606 | Msa0450570:three_prime_UTR | 35.0% |
| GTGCACTAAAAATATGGTGA+AGG | - | chr3_3:36165733-36165752 | Msa0450570:CDS | 35.0% | |
| GCACTAAAAATATGGTGAAG+GGG | - | chr3_3:36165735-36165754 | Msa0450570:CDS | 35.0% | |
| AATTGTAGCTAGAACAATGG+AGG | - | chr3_3:36165819-36165838 | Msa0450570:intron | 35.0% | |
| ! | ATAAATTTTGCATGTTGCGG+CGG | + | chr3_3:36165934-36165953 | None:intergenic | 35.0% |
| GTAAAGTGGCAGTTTACTGT+TGG | + | chr3_3:36165845-36165864 | None:intergenic | 40.0% | |
| !! | AACTGCCACTTTACACATAG+CGG | - | chr3_3:36165851-36165870 | Msa0450570:intron | 40.0% |
| CATAGCGGCAGCAAAAATTA+CGG | - | chr3_3:36165866-36165885 | Msa0450570:intron | 40.0% | |
| ! | TTGTGTGTTGCTAAACTTGC+AGG | - | chr3_3:36166082-36166101 | Msa0450570:intron | 40.0% |
| ATCTGACTGAGTCTAAGAGT+TGG | - | chr3_3:36166124-36166143 | Msa0450570:intron | 40.0% | |
| TCTGACTGAGTCTAAGAGTT+GGG | - | chr3_3:36166125-36166144 | Msa0450570:intron | 40.0% | |
| AGAGGCTATTGATCAGTTCT+TGG | - | chr3_3:36166158-36166177 | Msa0450570:intron | 40.0% | |
| GTAAAGTGGCAGTTTACTGT+TGG | + | chr3_3:36165845-36165864 | None:intergenic | 40.0% | |
| !! | AACTGCCACTTTACACATAG+CGG | - | chr3_3:36165851-36165870 | Msa0450570:intron | 40.0% |
| CATAGCGGCAGCAAAAATTA+CGG | - | chr3_3:36165866-36165885 | Msa0450570:intron | 40.0% | |
| ! | TTGTGTGTTGCTAAACTTGC+AGG | - | chr3_3:36166082-36166101 | Msa0450570:intron | 40.0% |
| ATCTGACTGAGTCTAAGAGT+TGG | - | chr3_3:36166124-36166143 | Msa0450570:intron | 40.0% | |
| TCTGACTGAGTCTAAGAGTT+GGG | - | chr3_3:36166125-36166144 | Msa0450570:intron | 40.0% | |
| AGAGGCTATTGATCAGTTCT+TGG | - | chr3_3:36166158-36166177 | Msa0450570:intron | 40.0% | |
| AGGTGCATACCTAGTGAAGA+TGG | + | chr3_3:36165599-36165618 | None:intergenic | 45.0% | |
| ACCGCCAGTTTGGTATATAG+TGG | - | chr3_3:36165899-36165918 | Msa0450570:intron | 45.0% | |
| GCCACTATATACCAAACTGG+CGG | + | chr3_3:36165903-36165922 | None:intergenic | 45.0% | |
| GCCAGTTTGGTATATAGTGG+CGG | - | chr3_3:36165902-36165921 | Msa0450570:intron | 45.0% | |
| ! | AAGTCAAGTCGCAAGCATTG+CGG | + | chr3_3:36165959-36165978 | None:intergenic | 45.0% |
| AGTCTAAGAGTTGGGATGTG+AGG | - | chr3_3:36166133-36166152 | Msa0450570:intron | 45.0% | |
| AGGTGCATACCTAGTGAAGA+TGG | + | chr3_3:36165599-36165618 | None:intergenic | 45.0% | |
| ACCGCCAGTTTGGTATATAG+TGG | - | chr3_3:36165899-36165918 | Msa0450570:intron | 45.0% | |
| GCCACTATATACCAAACTGG+CGG | + | chr3_3:36165903-36165922 | None:intergenic | 45.0% | |
| GCCAGTTTGGTATATAGTGG+CGG | - | chr3_3:36165902-36165921 | Msa0450570:intron | 45.0% | |
| ! | AAGTCAAGTCGCAAGCATTG+CGG | + | chr3_3:36165959-36165978 | None:intergenic | 45.0% |
| AGTCTAAGAGTTGGGATGTG+AGG | - | chr3_3:36166133-36166152 | Msa0450570:intron | 45.0% | |
| GTGAAGGGGATGAAGCTGTT+TGG | - | chr3_3:36165749-36165768 | Msa0450570:intron | 50.0% | |
| TGCTGCCGCTATGTGTAAAG+TGG | + | chr3_3:36165859-36165878 | None:intergenic | 50.0% | |
| !!! | CAGTTTTGAGACCGCCAGTT+TGG | - | chr3_3:36165889-36165908 | Msa0450570:intron | 50.0% |
| GCCGCCACTATATACCAAAC+TGG | + | chr3_3:36165906-36165925 | None:intergenic | 50.0% | |
| ! | AGTCAAGTCGCAAGCATTGC+GGG | + | chr3_3:36165958-36165977 | None:intergenic | 50.0% |
| GAGTTGGGATGTGAGGAAAG+AGG | - | chr3_3:36166140-36166159 | Msa0450570:intron | 50.0% | |
| GTGAAGGGGATGAAGCTGTT+TGG | - | chr3_3:36165749-36165768 | Msa0450570:intron | 50.0% | |
| TGCTGCCGCTATGTGTAAAG+TGG | + | chr3_3:36165859-36165878 | None:intergenic | 50.0% | |
| !!! | CAGTTTTGAGACCGCCAGTT+TGG | - | chr3_3:36165889-36165908 | Msa0450570:intron | 50.0% |
| GCCGCCACTATATACCAAAC+TGG | + | chr3_3:36165906-36165925 | None:intergenic | 50.0% | |
| ! | AGTCAAGTCGCAAGCATTGC+GGG | + | chr3_3:36165958-36165977 | None:intergenic | 50.0% |
| GAGTTGGGATGTGAGGAAAG+AGG | - | chr3_3:36166140-36166159 | Msa0450570:intron | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_3 | gene | 36165523 | 36166338 | 36165523 | ID=Msa0450570;Name=Msa0450570 |
| chr3_3 | mRNA | 36165523 | 36166338 | 36165523 | ID=Msa0450570-mRNA-1;Parent=Msa0450570;Name=Msa0450570-mRNA-1;_AED=0.37;_eAED=0.37;_QI=0|1|0.5|1|1|1|2|114|68 |
| chr3_3 | exon | 36165523 | 36165757 | 36165523 | ID=Msa0450570-mRNA-1:exon:6626;Parent=Msa0450570-mRNA-1 |
| chr3_3 | exon | 36166253 | 36166338 | 36166253 | ID=Msa0450570-mRNA-1:exon:6625;Parent=Msa0450570-mRNA-1 |
| chr3_3 | CDS | 36166253 | 36166338 | 36166253 | ID=Msa0450570-mRNA-1:cds;Parent=Msa0450570-mRNA-1 |
| chr3_3 | CDS | 36165637 | 36165757 | 36165637 | ID=Msa0450570-mRNA-1:cds;Parent=Msa0450570-mRNA-1 |
| chr3_3 | three_prime_UTR | 36165523 | 36165636 | 36165523 | ID=Msa0450570-mRNA-1:three_prime_utr;Parent=Msa0450570-mRNA-1 |
| Gene Sequence |
| Protein sequence |
