Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0730000 | XP_003614571.1 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 4.91e-84 | 251 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0730000 | sp|Q03958|PFD6_MOUSE | 45.528 | 123 | 65 | 1 | 9 | 129 | 5 | 127 | 1.06e-27 | 102 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0730000 | G7K0G0 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 2.35e-84 | 251 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0008410 | Msa0730000 | 0.805566 | 1.254806e-49 | -8.615850e-47 |
| Msa0018620 | Msa0730000 | 0.803177 | 3.948559e-49 | -8.615850e-47 |
| Msa0033880 | Msa0730000 | 0.822919 | 1.831175e-53 | -8.615850e-47 |
| Msa0037160 | Msa0730000 | 0.810359 | 1.198865e-50 | -8.615850e-47 |
| Msa0057140 | Msa0730000 | 0.815949 | 7.111802e-52 | -8.615850e-47 |
| Msa0090520 | Msa0730000 | 0.814093 | 1.836446e-51 | -8.615850e-47 |
| Msa0091610 | Msa0730000 | 0.803626 | 3.186704e-49 | -8.615850e-47 |
| Msa0115370 | Msa0730000 | 0.801350 | 9.385690e-49 | -8.615850e-47 |
| Msa0606810 | Msa0730000 | 0.805488 | 1.302920e-49 | -8.615850e-47 |
| Msa0614510 | Msa0730000 | 0.806831 | 6.794909e-50 | -8.615850e-47 |
| Msa0620230 | Msa0730000 | 0.801339 | 9.436032e-49 | -8.615850e-47 |
| Msa0652300 | Msa0730000 | 0.805362 | 1.384835e-49 | -8.615850e-47 |
| Msa0652450 | Msa0730000 | 0.804742 | 1.866406e-49 | -8.615850e-47 |
| Msa0661090 | Msa0730000 | 0.824080 | 9.795776e-54 | -8.615850e-47 |
| Msa0673270 | Msa0730000 | 0.801733 | 7.832449e-49 | -8.615850e-47 |
| Msa0686080 | Msa0730000 | 0.809114 | 2.220281e-50 | -8.615850e-47 |
| Msa0687020 | Msa0730000 | 0.821257 | 4.444097e-53 | -8.615850e-47 |
| Msa0694840 | Msa0730000 | 0.803581 | 3.255555e-49 | -8.615850e-47 |
| Msa0726080 | Msa0730000 | 0.816307 | 5.917426e-52 | -8.615850e-47 |
| Msa0730000 | Msa0734960 | 0.803361 | 3.616731e-49 | -8.615850e-47 |
| Msa0730000 | Msa0784380 | 0.811734 | 6.036089e-51 | -8.615850e-47 |
| Msa0730000 | Msa0827280 | 0.812317 | 4.504740e-51 | -8.615850e-47 |
| Msa0730000 | Msa0836500 | 0.828604 | 8.197794e-55 | -8.615850e-47 |
| Msa0730000 | Msa0844230 | 0.803944 | 2.737437e-49 | -8.615850e-47 |
| Msa0730000 | Msa0846230 | 0.815539 | 8.776092e-52 | -8.615850e-47 |
| Msa0730000 | Msa0849200 | 0.810803 | 9.611485e-51 | -8.615850e-47 |
| Msa0730000 | Msa0869100 | 0.813056 | 3.104731e-51 | -8.615850e-47 |
| Msa0730000 | Msa0898760 | 0.824615 | 7.331947e-54 | -8.615850e-47 |
| Msa0730000 | Msa0899290 | 0.823117 | 1.645747e-53 | -8.615850e-47 |
| Msa0730000 | Msa0899350 | 0.804719 | 1.887413e-49 | -8.615850e-47 |
| Msa0730000 | Msa0928120 | 0.812012 | 5.252346e-51 | -8.615850e-47 |
| Msa0730000 | Msa0967370 | 0.833269 | 5.876841e-56 | -8.615850e-47 |
| Msa0730000 | Msa0970030 | 0.818234 | 2.180124e-52 | -8.615850e-47 |
| Msa0730000 | Msa0990580 | 0.806990 | 6.290085e-50 | -8.615850e-47 |
| Msa0730000 | Msa0997430 | 0.820767 | 5.764840e-53 | -8.615850e-47 |
| Msa0730000 | Msa1006840 | 0.807183 | 5.723157e-50 | -8.615850e-47 |
| Msa0730000 | Msa1013040 | 0.814992 | 1.161209e-51 | -8.615850e-47 |
| Msa0730000 | Msa1024750 | 0.809189 | 2.139359e-50 | -8.615850e-47 |
| Msa0730000 | Msa1025940 | 0.800335 | 1.512483e-48 | -8.615850e-47 |
| Msa0730000 | Msa1041210 | 0.801810 | 7.553023e-49 | -8.615850e-47 |
| Msa0730000 | Msa1055010 | 0.814763 | 1.305265e-51 | -8.615850e-47 |
| Msa0730000 | Msa1055410 | 0.801499 | 8.748826e-49 | -8.615850e-47 |
| Msa0730000 | Msa1089320 | 0.805431 | 1.339262e-49 | -8.615850e-47 |
| Msa0730000 | Msa1123380 | 0.801303 | 9.596708e-49 | -8.615850e-47 |
| Msa0730000 | Msa1125470 | 0.809475 | 1.858171e-50 | -8.615850e-47 |
| Msa0730000 | Msa1127890 | 0.806961 | 6.379129e-50 | -8.615850e-47 |
| Msa0730000 | Msa1171830 | 0.802874 | 4.560466e-49 | -8.615850e-47 |
| Msa0730000 | Msa1207270 | 0.811055 | 8.477607e-51 | -8.615850e-47 |
| Msa0730000 | Msa1218600 | 0.823795 | 1.142905e-53 | -8.615850e-47 |
| Msa0730000 | Msa1227690 | 0.801515 | 8.682280e-49 | -8.615850e-47 |
| Msa0730000 | Msa1251160 | 0.807326 | 5.337492e-50 | -8.615850e-47 |
| Msa0730000 | Msa1254710 | 0.800325 | 1.519647e-48 | -8.615850e-47 |
| Msa0730000 | Msa1255040 | -0.807467 | 4.983243e-50 | -8.615850e-47 |
| Msa0730000 | Msa1295490 | -0.816268 | 6.035752e-52 | -8.615850e-47 |
| Msa0730000 | Msa1305710 | 0.803376 | 3.590438e-49 | -8.615850e-47 |
| Msa0730000 | Msa1320820 | 0.801114 | 1.048832e-48 | -8.615850e-47 |
| Msa0730000 | Msa1356440 | 0.816042 | 6.779724e-52 | -8.615850e-47 |
| Msa0730000 | Msa1361410 | 0.800782 | 1.226100e-48 | -8.615850e-47 |
| Msa0730000 | Msa1362420 | 0.808535 | 2.952201e-50 | -8.615850e-47 |
| Msa0730000 | Msa1364210 | 0.805790 | 1.126158e-49 | -8.615850e-47 |
| Msa0730000 | Msa1411950 | 0.802490 | 5.472867e-49 | -8.615850e-47 |
| Msa0730000 | Msa1452480 | 0.808025 | 3.792947e-50 | -8.615850e-47 |
| Msa0123510 | Msa0730000 | 0.806272 | 8.915775e-50 | -8.615850e-47 |
| Msa0127310 | Msa0730000 | 0.800383 | 1.479042e-48 | -8.615850e-47 |
| Msa0127850 | Msa0730000 | 0.828557 | 8.416240e-55 | -8.615850e-47 |
| Msa0135420 | Msa0730000 | 0.804294 | 2.314942e-49 | -8.615850e-47 |
| Msa0137990 | Msa0730000 | 0.815411 | 9.371886e-52 | -8.615850e-47 |
| Msa0146080 | Msa0730000 | 0.807472 | 4.970983e-50 | -8.615850e-47 |
| Msa0174000 | Msa0730000 | 0.802776 | 4.777326e-49 | -8.615850e-47 |
| Msa0183900 | Msa0730000 | 0.823487 | 1.349162e-53 | -8.615850e-47 |
| Msa0204980 | Msa0730000 | 0.808580 | 2.887793e-50 | -8.615850e-47 |
| Msa0384880 | Msa0730000 | 0.802716 | 4.915243e-49 | -8.615850e-47 |
| Msa0387730 | Msa0730000 | 0.803216 | 3.874716e-49 | -8.615850e-47 |
| Msa0428170 | Msa0730000 | 0.806128 | 9.559213e-50 | -8.615850e-47 |
| Msa0453690 | Msa0730000 | 0.825361 | 4.888507e-54 | -8.615850e-47 |
| Msa0465550 | Msa0730000 | 0.802066 | 6.691782e-49 | -8.615850e-47 |
| Msa0239450 | Msa0730000 | 0.846716 | 1.823207e-59 | -8.615850e-47 |
| Msa0271530 | Msa0730000 | 0.806798 | 6.905086e-50 | -8.615850e-47 |
| Msa0343190 | Msa0730000 | 0.815340 | 9.721998e-52 | -8.615850e-47 |
| Msa0484740 | Msa0730000 | 0.808770 | 2.630598e-50 | -8.615850e-47 |
| Msa0546360 | Msa0730000 | 0.809887 | 1.514835e-50 | -8.615850e-47 |
| Msa0547990 | Msa0730000 | 0.808053 | 3.741738e-50 | -8.615850e-47 |
| Msa0556790 | Msa0730000 | 0.812467 | 4.178686e-51 | -8.615850e-47 |
| Msa0556860 | Msa0730000 | 0.809003 | 2.345113e-50 | -8.615850e-47 |
| Msa0560500 | Msa0730000 | 0.802386 | 5.751411e-49 | -8.615850e-47 |
| Msa0581070 | Msa0730000 | 0.812247 | 4.666850e-51 | -8.615850e-47 |
| Msa0588090 | Msa0730000 | 0.800210 | 1.603975e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0730000 | MtrunA17_Chr5g0423171 | 100.000 | 129 | 0 | 0 | 1 | 129 | 1 | 129 | 4.52e-88 | 251 |
| Msa0730000 | MtrunA17_Chr3g0104151 | 84.211 | 38 | 6 | 0 | 92 | 129 | 17 | 54 | 4.22e-13 | 59.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0730000 | AT1G29990.1 | 86.047 | 129 | 18 | 0 | 1 | 129 | 1 | 129 | 3.33e-77 | 224 |
Find 42 sgRNAs with CRISPR-Local
Find 435 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTTCACAAATTCGATTTC+TGG | 0.151221 | 5_1:-38121173 | None:intergenic |
| ATCTTTCCACCTTCTTTCTT+TGG | 0.191922 | 5_1:-38126816 | None:intergenic |
| TTAGCACTGTCTCATTATTA+TGG | 0.233713 | 5_1:+38126904 | Msa0730000:three_prime_UTR |
| AAGCATTAAGATCATATTAA+TGG | 0.286595 | 5_1:+38126990 | Msa0730000:three_prime_UTR |
| TGATGCCACGGTTCAAGATT+TGG | 0.316433 | 5_1:+38125692 | Msa0730000:CDS |
| TGTACTTGTTAAGCAAGATT+TGG | 0.330090 | 5_1:+38121951 | Msa0730000:CDS |
| TTGAATTTGCTTTGATTAAG+TGG | 0.339641 | 5_1:-38127037 | None:intergenic |
| GCAAATGTTTACAAGTTGAT+TGG | 0.350705 | 5_1:+38121925 | Msa0730000:CDS |
| ACAGAAGATGCAATCTCTTC+AGG | 0.356299 | 5_1:+38126679 | Msa0730000:CDS |
| CGAAAATGAGCTCGTTCTTA+AGG | 0.364571 | 5_1:+38121456 | Msa0730000:CDS |
| TAGAGATCTTCAACGCGAAT+TGG | 0.368259 | 5_1:+38121242 | Msa0730000:CDS |
| CGATCTCAACAAGCTTCAAA+AGG | 0.400711 | 5_1:+38121278 | Msa0730000:CDS |
| AACTAGAGTGGTTTCTGTCT+TGG | 0.406531 | 5_1:-38126844 | None:intergenic |
| CAAACAGACAAACTTGTAGA+TGG | 0.420768 | 5_1:+38126872 | Msa0730000:three_prime_UTR |
| ACTGTAACTTGACCGTTCAT+AGG | 0.485267 | 5_1:+38126744 | Msa0730000:three_prime_UTR |
| CAATCTCTTCAGGCTGGGAA+AGG | 0.495242 | 5_1:+38126689 | Msa0730000:CDS |
| AAGATGCAATCTCTTCAGGC+TGG | 0.496600 | 5_1:+38126683 | Msa0730000:CDS |
| AATCTCTTCAGGCTGGGAAA+GGG | 0.515494 | 5_1:+38126690 | Msa0730000:CDS |
| AAATCTTGCTTAACAAGTAC+AGG | 0.520028 | 5_1:-38121949 | None:intergenic |
| TCTCTTGCGAACATTTGCAT+TGG | 0.528626 | 5_1:-38121980 | None:intergenic |
| GATCTCAACAAGCTTCAAAA+GGG | 0.534109 | 5_1:+38121279 | Msa0730000:CDS |
| TTTGGCATCAAAAGTCACAT+TGG | 0.541954 | 5_1:-38126798 | None:intergenic |
| TTCGATTTCTGGCACACTGA+GGG | 0.542358 | 5_1:-38121162 | None:intergenic |
| CTTAATCAAAGCAAATTCAA+TGG | 0.542611 | 5_1:+38127040 | Msa0730000:three_prime_UTR |
| GCAGAATAGCAAGAAAGAAA+CGG | 0.544496 | 5_1:+38125722 | Msa0730000:CDS |
| CTCTTCCAAATCTTGAACCG+TGG | 0.545459 | 5_1:-38125697 | None:intergenic |
| TTACAGTAAACAAACAATCA+AGG | 0.551424 | 5_1:-38126728 | None:intergenic |
| CTGTTTGAGCAAAACTAGAG+TGG | 0.565158 | 5_1:-38126856 | None:intergenic |
| AGATGCAATCTCTTCAGGCT+GGG | 0.576195 | 5_1:+38126684 | Msa0730000:CDS |
| CAGGAAGCGTCTTGATGCCA+CGG | 0.578703 | 5_1:+38125680 | Msa0730000:intron |
| TGTTAAGCAAGATTTGGCTG+AGG | 0.593363 | 5_1:+38121957 | Msa0730000:CDS |
| GCGTTGAAGATCTCTAATGT+TGG | 0.594934 | 5_1:-38121235 | None:intergenic |
| AATCGAATTTGTGAAAGCAA+AGG | 0.600362 | 5_1:+38121178 | Msa0730000:five_prime_UTR |
| TTGATGCCAAAGAAAGAAGG+TGG | 0.601133 | 5_1:+38126810 | Msa0730000:three_prime_UTR |
| AAGAAGTACACTATTCAACT+TGG | 0.603063 | 5_1:+38121433 | Msa0730000:CDS |
| GTGAAAGCAAAGGAAGGAGG+AGG | 0.627755 | 5_1:+38121188 | Msa0730000:five_prime_UTR |
| TCTTCAGGCTGGGAAAGGGA+AGG | 0.633958 | 5_1:+38126694 | Msa0730000:CDS |
| GAATTTGTGAAAGCAAAGGA+AGG | 0.649479 | 5_1:+38121182 | Msa0730000:five_prime_UTR |
| GTAACTTGACCGTTCATAGG+TGG | 0.669511 | 5_1:+38126747 | Msa0730000:three_prime_UTR |
| TTTGTGAAAGCAAAGGAAGG+AGG | 0.670673 | 5_1:+38121185 | Msa0730000:five_prime_UTR |
| ACTCATTCACCACCTATGAA+CGG | 0.679282 | 5_1:-38126756 | None:intergenic |
| ATTCGATTTCTGGCACACTG+AGG | 0.682370 | 5_1:-38121163 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAACTATTTTATCATTTAT+AGG | - | chr5_1:38122517-38122536 | None:intergenic | 10.0% |
| !!! | AATAAAATTCTAAAACAAAA+TGG | - | chr5_1:38124477-38124496 | None:intergenic | 10.0% |
| !!! | TTTCTTTTTTTAAAAAGTCT+CGG | - | chr5_1:38121649-38121668 | None:intergenic | 15.0% |
| !!! | TGGTAATTTTTGATATATTT+AGG | + | chr5_1:38121768-38121787 | Msa0730000:intron | 15.0% |
| !!! | ATTGTTGTTCTTTTTTTAAT+AGG | + | chr5_1:38121879-38121898 | Msa0730000:intron | 15.0% |
| !!! | GTTATTTATTTTCTTGATTT+TGG | + | chr5_1:38122042-38122061 | Msa0730000:intron | 15.0% |
| !! | AAATAATCACTTCAAAATAT+TGG | + | chr5_1:38122256-38122275 | Msa0730000:intron | 15.0% |
| !!! | TATTTTTTCGTTATTACTTT+TGG | + | chr5_1:38122366-38122385 | Msa0730000:intron | 15.0% |
| !! | TAATTTATTCATAGACAAAA+GGG | + | chr5_1:38122401-38122420 | Msa0730000:intron | 15.0% |
| !!! | TTAGAGAAATATGTTTTTTA+AGG | + | chr5_1:38122619-38122638 | Msa0730000:intron | 15.0% |
| !! | TAAAATTATGTATTAGCAAA+AGG | + | chr5_1:38122996-38123015 | Msa0730000:intron | 15.0% |
| !! | ATAAGATAATATGATGAATA+TGG | + | chr5_1:38123300-38123319 | Msa0730000:intron | 15.0% |
| !!! | ATTTTGTATTCTAAAATATC+AGG | + | chr5_1:38124899-38124918 | Msa0730000:intron | 15.0% |
| !!! | TTTTGTATTCTAAAATATCA+GGG | + | chr5_1:38124900-38124919 | Msa0730000:intron | 15.0% |
| !! | TTTGTAAGTTAGTAATTAAT+TGG | + | chr5_1:38125282-38125301 | Msa0730000:intron | 15.0% |
| !! | TTGTAAGTTAGTAATTAATT+GGG | + | chr5_1:38125283-38125302 | Msa0730000:intron | 15.0% |
| !! | TATGTGTGTTATAATAAATA+AGG | + | chr5_1:38125444-38125463 | Msa0730000:intron | 15.0% |
| !! | AATAATTACAGAATAACATT+TGG | + | chr5_1:38125800-38125819 | Msa0730000:intron | 15.0% |
| !!! | TCTAAAATGACAAATAATTT+GGG | - | chr5_1:38126321-38126340 | None:intergenic | 15.0% |
| !!! | TTCTAAAATGACAAATAATT+TGG | - | chr5_1:38126322-38126341 | None:intergenic | 15.0% |
| !!! | TTAAAAAGTATATTCTATCT+TGG | + | chr5_1:38126464-38126483 | Msa0730000:intron | 15.0% |
| !!! | TGTATTTAATTTTTCTTAAG+AGG | + | chr5_1:38126494-38126513 | Msa0730000:intron | 15.0% |
| !!! | ATTTATTTTCTTGATTTTGG+AGG | + | chr5_1:38122045-38122064 | Msa0730000:intron | 20.0% |
| !! | GTAATTTATTCATAGACAAA+AGG | + | chr5_1:38122400-38122419 | Msa0730000:intron | 20.0% |
| !! | ATAGGATACAAGAAAAAAAA+TGG | - | chr5_1:38122499-38122518 | None:intergenic | 20.0% |
| !!! | AGAAATATGTTTTTTAAGGA+TGG | + | chr5_1:38122623-38122642 | Msa0730000:intron | 20.0% |
| !!! | GAAATATGTTTTTTAAGGAT+GGG | + | chr5_1:38122624-38122643 | Msa0730000:intron | 20.0% |
| !! | TTGTAGTAGATAAATAACTT+TGG | + | chr5_1:38123098-38123117 | Msa0730000:intron | 20.0% |
| !!! | GAATAGTGGTATATTAATTT+TGG | + | chr5_1:38123326-38123345 | Msa0730000:intron | 20.0% |
| !! | TAGTTAAGTATGTTTATAAG+AGG | - | chr5_1:38123693-38123712 | None:intergenic | 20.0% |
| !! | TTATAAACATACTTAACTAG+TGG | + | chr5_1:38123694-38123713 | Msa0730000:intron | 20.0% |
| !! | TAACATAACAAAAAATAGCA+AGG | + | chr5_1:38123886-38123905 | Msa0730000:intron | 20.0% |
| !!! | TTTGTATTTCAAGTTCTTAT+TGG | + | chr5_1:38124415-38124434 | Msa0730000:intron | 20.0% |
| !! | ATAATACATATTGTTCGATA+TGG | + | chr5_1:38124447-38124466 | Msa0730000:intron | 20.0% |
| !! | ATGTTTAATTACATCAGTAT+TGG | + | chr5_1:38124869-38124888 | Msa0730000:intron | 20.0% |
| !!! | ATGTAACATTTTTTACTTAG+CGG | - | chr5_1:38125187-38125206 | None:intergenic | 20.0% |
| !!! | GACTTTTAAATTATTTCTCA+TGG | + | chr5_1:38125775-38125794 | Msa0730000:intron | 20.0% |
| !! | CAAAAACATAGTATATTTCA+AGG | - | chr5_1:38126947-38126966 | None:intergenic | 20.0% |
| !! | AAGCATTAAGATCATATTAA+TGG | + | chr5_1:38126990-38127009 | Msa0730000:three_prime_UTR | 20.0% |
| !! | AAAAAGATGAACGATTTTGA+AGG | - | chr5_1:38121355-38121374 | None:intergenic | 25.0% |
| !! | GTACCCTTTAATGTATTTTA+GGG | + | chr5_1:38121478-38121497 | Msa0730000:intron | 25.0% |
| ! | GAACCCTAAAATACATTAAA+GGG | - | chr5_1:38121484-38121503 | None:intergenic | 25.0% |
| ! | AGAACCCTAAAATACATTAA+AGG | - | chr5_1:38121485-38121504 | None:intergenic | 25.0% |
| !! | TTGATTTTCGAATGTGTATT+CGG | + | chr5_1:38121698-38121717 | Msa0730000:intron | 25.0% |
| ! | TAGAATTAGGAAACAAACTA+GGG | + | chr5_1:38121738-38121757 | Msa0730000:intron | 25.0% |
| !! | CAAAAATCAAACCATCATTT+TGG | - | chr5_1:38121831-38121850 | None:intergenic | 25.0% |
| !!! | GTTCTTTTTTTAATAGGAGT+TGG | + | chr5_1:38121885-38121904 | Msa0730000:intron | 25.0% |
| !!! | ATGAAACAGATCATTTTTCT+AGG | - | chr5_1:38122095-38122114 | None:intergenic | 25.0% |
| ! | TTCAACATATGCAAACATAT+CGG | - | chr5_1:38122324-38122343 | None:intergenic | 25.0% |
| !!! | ATTACTTTTGGATGAAGAAT+AGG | + | chr5_1:38122378-38122397 | Msa0730000:intron | 25.0% |
| ! | AATTCATTGTTTGTAAGTAC+AGG | - | chr5_1:38122445-38122464 | None:intergenic | 25.0% |
| ! | ATCAACAAAAATCAAGTCTA+CGG | - | chr5_1:38122575-38122594 | None:intergenic | 25.0% |
| !! | ACTTGATTTTTGTTGATATG+CGG | + | chr5_1:38122578-38122597 | Msa0730000:intron | 25.0% |
| ! | TACAAGAATAAGGATGAAAA+TGG | + | chr5_1:38122734-38122753 | Msa0730000:intron | 25.0% |
| !! | GGAAATCTTTTACATTTGAT+GGG | - | chr5_1:38122839-38122858 | None:intergenic | 25.0% |
| ! | TTTATCTACTACAATCTACA+AGG | - | chr5_1:38123092-38123111 | None:intergenic | 25.0% |
| ! | GATAATATGATGAATATGGA+TGG | + | chr5_1:38123304-38123323 | Msa0730000:intron | 25.0% |
| ! | TAAGTATGTTTATAAGAGGA+GGG | - | chr5_1:38123689-38123708 | None:intergenic | 25.0% |
| ! | TTAAGTATGTTTATAAGAGG+AGG | - | chr5_1:38123690-38123709 | None:intergenic | 25.0% |
| !!! | AAGAACTTTTTCTTCTCTAT+AGG | - | chr5_1:38123971-38123990 | None:intergenic | 25.0% |
| !! | AGAATCATTTGGTTAGTTAT+TGG | - | chr5_1:38123995-38124014 | None:intergenic | 25.0% |
| !!! | TGATTAAACATTTTGAGAAG+TGG | + | chr5_1:38124280-38124299 | Msa0730000:intron | 25.0% |
| ! | GAAATACAAAGAGAGTAAAT+TGG | - | chr5_1:38124405-38124424 | None:intergenic | 25.0% |
| !!! | ACATGAAAGTGTTGAAATTT+GGG | - | chr5_1:38124853-38124872 | None:intergenic | 25.0% |
| !!! | AACATGAAAGTGTTGAAATT+TGG | - | chr5_1:38124854-38124873 | None:intergenic | 25.0% |
| ! | GTAATTAATTGGGAAATTGA+AGG | + | chr5_1:38125293-38125312 | Msa0730000:intron | 25.0% |
| ! | AAATTGAAGGAAAGATATGT+TGG | + | chr5_1:38125306-38125325 | Msa0730000:intron | 25.0% |
| ! | AAGATTAGATACACTTCTAA+CGG | + | chr5_1:38125535-38125554 | Msa0730000:intron | 25.0% |
| !! | CTTCATTTTAGATCTTGTTA+TGG | + | chr5_1:38125577-38125596 | Msa0730000:intron | 25.0% |
| ! | ATCATCATCATCATCTTATA+TGG | + | chr5_1:38125646-38125665 | Msa0730000:intron | 25.0% |
| ! | TTCGTTGAGATACAAATAAA+CGG | - | chr5_1:38126384-38126403 | None:intergenic | 25.0% |
| ! | TTACAGTAAACAAACAATCA+AGG | - | chr5_1:38126731-38126750 | None:intergenic | 25.0% |
| !! | TTGAATTTGCTTTGATTAAG+TGG | - | chr5_1:38127040-38127059 | None:intergenic | 25.0% |
| ! | CTTAATCAAAGCAAATTCAA+TGG | + | chr5_1:38127040-38127059 | Msa0730000:three_prime_UTR | 25.0% |
| AATCGAATTTGTGAAAGCAA+AGG | + | chr5_1:38121178-38121197 | Msa0730000:five_prime_UTR | 30.0% | |
| !! | TGAACGATTTTGAAGGAATT+AGG | - | chr5_1:38121348-38121367 | None:intergenic | 30.0% |
| ! | AAGAAGTACACTATTCAACT+TGG | + | chr5_1:38121433-38121452 | Msa0730000:CDS | 30.0% |
| ! | GGTACCCTTTAATGTATTTT+AGG | + | chr5_1:38121477-38121496 | Msa0730000:intron | 30.0% |
| !! | TTTTAAAAAGTCTCGGTATC+TGG | - | chr5_1:38121642-38121661 | None:intergenic | 30.0% |
| CTAGTTTGATCACTAGAATT+AGG | + | chr5_1:38121725-38121744 | Msa0730000:intron | 30.0% | |
| CTAGAATTAGGAAACAAACT+AGG | + | chr5_1:38121737-38121756 | Msa0730000:intron | 30.0% | |
| AGAATTAGGAAACAAACTAG+GGG | + | chr5_1:38121739-38121758 | Msa0730000:intron | 30.0% | |
| ! | CTGTGTTTCAATGATTGTTT+TGG | + | chr5_1:38121851-38121870 | Msa0730000:intron | 30.0% |
| !! | GCAAATGTTTACAAGTTGAT+TGG | + | chr5_1:38121925-38121944 | Msa0730000:CDS | 30.0% |
| AAATCTTGCTTAACAAGTAC+AGG | - | chr5_1:38121952-38121971 | None:intergenic | 30.0% | |
| ! | TGTACTTGTTAAGCAAGATT+TGG | + | chr5_1:38121951-38121970 | Msa0730000:CDS | 30.0% |
| GTTACATGATTTGATTCATC+TGG | + | chr5_1:38122140-38122159 | Msa0730000:intron | 30.0% | |
| TTGATTGAAAAGTAACCACT+TGG | + | chr5_1:38122198-38122217 | Msa0730000:intron | 30.0% | |
| AACCACTTGGAATGTTTATT+AGG | + | chr5_1:38122211-38122230 | Msa0730000:intron | 30.0% | |
| ACCACTTGGAATGTTTATTA+GGG | + | chr5_1:38122212-38122231 | Msa0730000:intron | 30.0% | |
| TCAACATATGCAAACATATC+GGG | - | chr5_1:38122323-38122342 | None:intergenic | 30.0% | |
| AACAATGAATTTGACTGTCT+TGG | + | chr5_1:38122454-38122473 | Msa0730000:intron | 30.0% | |
| AAAATGGAAATCAACTGTTC+AGG | - | chr5_1:38122483-38122502 | None:intergenic | 30.0% | |
| TCATCCTTATTCTTGTACAA+TGG | - | chr5_1:38122731-38122750 | None:intergenic | 30.0% | |
| ! | CGGAAATCTTTTACATTTGA+TGG | - | chr5_1:38122840-38122859 | None:intergenic | 30.0% |
| ! | ATTAGCAAAAGGTGTATGTT+AGG | + | chr5_1:38123007-38123026 | Msa0730000:intron | 30.0% |
| TGTCTAATCACATGCATTTA+CGG | - | chr5_1:38123183-38123202 | None:intergenic | 30.0% | |
| CAATTGAAAATGGAAAGAAC+AGG | - | chr5_1:38123245-38123264 | None:intergenic | 30.0% | |
| CATGGCTATACAATTGAAAA+TGG | - | chr5_1:38123255-38123274 | None:intergenic | 30.0% | |
| AATTGAGTATCATACTCTCA+TGG | - | chr5_1:38123273-38123292 | None:intergenic | 30.0% | |
| ! | TTTGGAGTTATTAGGAAATG+AGG | - | chr5_1:38123475-38123494 | None:intergenic | 30.0% |
| AAGTATGTTTATAAGAGGAG+GGG | - | chr5_1:38123688-38123707 | None:intergenic | 30.0% | |
| ! | ATAATCAGATTGACTCTGAT+AGG | - | chr5_1:38123720-38123739 | None:intergenic | 30.0% |
| AGGTATCTTGAAGAATCATT+TGG | - | chr5_1:38124006-38124025 | None:intergenic | 30.0% | |
| AGAGGAGAACTCTAATATAA+GGG | - | chr5_1:38124045-38124064 | None:intergenic | 30.0% | |
| TATGAAAACCTTCCACATAT+TGG | + | chr5_1:38124129-38124148 | Msa0730000:intron | 30.0% | |
| ATGAAAACCTTCCACATATT+GGG | + | chr5_1:38124130-38124149 | Msa0730000:intron | 30.0% | |
| TACAAAGAGAGTAAATTGGT+AGG | - | chr5_1:38124401-38124420 | None:intergenic | 30.0% | |
| GTTACTACCTAAATTATCTC+AGG | + | chr5_1:38124499-38124518 | Msa0730000:intron | 30.0% | |
| CTTGAGAAGAGTTTATAAAG+AGG | + | chr5_1:38124781-38124800 | Msa0730000:intron | 30.0% | |
| !! | CATGAAAGTGTTGAAATTTG+GGG | - | chr5_1:38124852-38124871 | None:intergenic | 30.0% |
| ATAAAACAGTATCACAGTGA+GGG | - | chr5_1:38125145-38125164 | None:intergenic | 30.0% | |
| AATAAAACAGTATCACAGTG+AGG | - | chr5_1:38125146-38125165 | None:intergenic | 30.0% | |
| !!! | GTGATACTGTTTTATTTTGC+TGG | + | chr5_1:38125150-38125169 | Msa0730000:intron | 30.0% |
| TTACATTAAGAGACCAAAAC+AGG | + | chr5_1:38125201-38125220 | Msa0730000:intron | 30.0% | |
| ! | AAGATATGTTGGTCAGTTTT+TGG | + | chr5_1:38125317-38125336 | Msa0730000:intron | 30.0% |
| TCTACCAAACATACATTTAG+AGG | - | chr5_1:38125848-38125867 | None:intergenic | 30.0% | |
| TTTGGTAGAACAACATTTAG+TGG | + | chr5_1:38125859-38125878 | Msa0730000:intron | 30.0% | |
| TTGGTAGAACAACATTTAGT+GGG | + | chr5_1:38125860-38125879 | Msa0730000:intron | 30.0% | |
| ATCAAGCAAAATAATGCAGA+AGG | - | chr5_1:38125983-38126002 | None:intergenic | 30.0% | |
| ! | AGAACATAGAAGTGTAGAAA+AGG | + | chr5_1:38126045-38126064 | Msa0730000:intron | 30.0% |
| ! | GAACATAGAAGTGTAGAAAA+GGG | + | chr5_1:38126046-38126065 | Msa0730000:intron | 30.0% |
| GGACAAACAAAATATTCTAG+AGG | - | chr5_1:38126300-38126319 | None:intergenic | 30.0% | |
| TCGTTGAGATACAAATAAAC+GGG | - | chr5_1:38126383-38126402 | None:intergenic | 30.0% | |
| TTCTACTTAACTACTCTACT+TGG | + | chr5_1:38126419-38126438 | Msa0730000:intron | 30.0% | |
| !! | CTCATATTATGTGTCGTTTA+AGG | - | chr5_1:38126533-38126552 | None:intergenic | 30.0% |
| CCTATAAAGACATGCTAATT+TGG | - | chr5_1:38126572-38126591 | None:intergenic | 30.0% | |
| CCAAATTAGCATGTCTTTAT+AGG | + | chr5_1:38126569-38126588 | Msa0730000:intron | 30.0% | |
| TTAGCACTGTCTCATTATTA+TGG | + | chr5_1:38126904-38126923 | Msa0730000:three_prime_UTR | 30.0% | |
| GCTTTCACAAATTCGATTTC+TGG | - | chr5_1:38121176-38121195 | None:intergenic | 35.0% | |
| GAATTTGTGAAAGCAAAGGA+AGG | + | chr5_1:38121182-38121201 | Msa0730000:five_prime_UTR | 35.0% | |
| GATCTCAACAAGCTTCAAAA+GGG | + | chr5_1:38121279-38121298 | Msa0730000:CDS | 35.0% | |
| ! | GTTCATATGGTACCCTTTTA+GGG | + | chr5_1:38121529-38121548 | Msa0730000:intron | 35.0% |
| !! | GATTGATTTCTCGGATTAGT+CGG | + | chr5_1:38121608-38121627 | Msa0730000:intron | 35.0% |
| AAACAAACTAGGGGATGTAT+TGG | + | chr5_1:38121748-38121767 | Msa0730000:intron | 35.0% | |
| ! | TTTTGGTCCTAAATGTGTGA+TGG | - | chr5_1:38121814-38121833 | None:intergenic | 35.0% |
| ! | CACATTTAGGACCAAAATGA+TGG | + | chr5_1:38121817-38121836 | Msa0730000:intron | 35.0% |
| TACATTTCAGCTGAACTGTA+AGG | + | chr5_1:38122009-38122028 | Msa0730000:intron | 35.0% | |
| ATGATTTGATTCATCTGGCA+CGG | + | chr5_1:38122145-38122164 | Msa0730000:intron | 35.0% | |
| CCACTTGGAATGTTTATTAG+GGG | + | chr5_1:38122213-38122232 | Msa0730000:intron | 35.0% | |
| GATATGCGGAAAGACTTAAT+TGG | + | chr5_1:38122592-38122611 | Msa0730000:intron | 35.0% | |
| GCTTCCATTGTACAAGAATA+AGG | + | chr5_1:38122724-38122743 | Msa0730000:intron | 35.0% | |
| CTTTCTATGCTTCACAATAG+CGG | - | chr5_1:38122860-38122879 | None:intergenic | 35.0% | |
| TATGACTAGAGCCTATAACA+AGG | + | chr5_1:38122926-38122945 | Msa0730000:intron | 35.0% | |
| TACGAAAGATGAAGACAGTA+AGG | - | chr5_1:38122969-38122988 | None:intergenic | 35.0% | |
| ACTGTCTTCATCTTTCGTAT+AGG | + | chr5_1:38122970-38122989 | Msa0730000:intron | 35.0% | |
| AGCAGCCGATTAAACTTTAT+CGG | + | chr5_1:38123044-38123063 | Msa0730000:intron | 35.0% | |
| GCAGACCGATAAAGTTTAAT+CGG | - | chr5_1:38123052-38123071 | None:intergenic | 35.0% | |
| GGTCTGCTAAATAAAGATAC+AGG | + | chr5_1:38123065-38123084 | Msa0730000:intron | 35.0% | |
| ! | ATAACTTTGGCTCGTTAGTT+TGG | + | chr5_1:38123111-38123130 | Msa0730000:intron | 35.0% |
| ATGCATGTGATTAGACATAC+TGG | + | chr5_1:38123186-38123205 | Msa0730000:intron | 35.0% | |
| TGCATGTGATTAGACATACT+GGG | + | chr5_1:38123187-38123206 | Msa0730000:intron | 35.0% | |
| GATGAATATGGATGGAATAG+TGG | + | chr5_1:38123312-38123331 | Msa0730000:intron | 35.0% | |
| TGGACAGTGAAGTAATACAA+TGG | + | chr5_1:38123346-38123365 | Msa0730000:intron | 35.0% | |
| CAGTGAAGTAATACAATGGA+TGG | + | chr5_1:38123350-38123369 | Msa0730000:intron | 35.0% | |
| AATAATCTCCTTGGAGGAAA+TGG | + | chr5_1:38123375-38123394 | Msa0730000:intron | 35.0% | |
| ! | ATAGTTTTCCATTTCCTCCA+AGG | - | chr5_1:38123386-38123405 | None:intergenic | 35.0% |
| GAATCCAATAAGTAGAGAGA+AGG | - | chr5_1:38123518-38123537 | None:intergenic | 35.0% | |
| AAGGATTTGAGGATCATGAT+TGG | - | chr5_1:38123552-38123571 | None:intergenic | 35.0% | |
| CAAGGAAAATGCTGTAAAGA+AGG | + | chr5_1:38123904-38123923 | Msa0730000:intron | 35.0% | |
| CAGAGGAGAACTCTAATATA+AGG | - | chr5_1:38124046-38124065 | None:intergenic | 35.0% | |
| TCATAAGAAGTAGGAATGAG+CGG | - | chr5_1:38124114-38124133 | None:intergenic | 35.0% | |
| ! | GGAAGGTTTTCATAAGAAGT+AGG | - | chr5_1:38124123-38124142 | None:intergenic | 35.0% |
| CAACATAAACCACACTAACA+GGG | - | chr5_1:38124170-38124189 | None:intergenic | 35.0% | |
| CTGTTAGTGTGGTTTATGTT+GGG | + | chr5_1:38124169-38124188 | Msa0730000:intron | 35.0% | |
| AAGCAGAGGATTAAACTTTC+TGG | + | chr5_1:38124205-38124224 | Msa0730000:intron | 35.0% | |
| AGCAGAGGATTAAACTTTCT+GGG | + | chr5_1:38124206-38124225 | Msa0730000:intron | 35.0% | |
| AAAGGAAGAGAGTAAAGAGA+AGG | + | chr5_1:38124235-38124254 | Msa0730000:intron | 35.0% | |
| AAGGAAGAGAGTAAAGAGAA+GGG | + | chr5_1:38124236-38124255 | Msa0730000:intron | 35.0% | |
| GAGTTTATGTCTCTTGAAAC+TGG | + | chr5_1:38124304-38124323 | Msa0730000:intron | 35.0% | |
| GGTCAGAAAAAAGAGAGAAA+AGG | - | chr5_1:38124373-38124392 | None:intergenic | 35.0% | |
| AGAGAGTAAATTGGTAGGAA+CGG | - | chr5_1:38124396-38124415 | None:intergenic | 35.0% | |
| AAGACGTCCTGAGATAATTT+AGG | - | chr5_1:38124509-38124528 | None:intergenic | 35.0% | |
| TAAATTATCTCAGGACGTCT+TGG | + | chr5_1:38124508-38124527 | Msa0730000:intron | 35.0% | |
| TCACAGAAACAAAGATCAAG+AGG | - | chr5_1:38124614-38124633 | None:intergenic | 35.0% | |
| TGTAAATTCCGCCTTAATTG+CGG | + | chr5_1:38124644-38124663 | Msa0730000:intron | 35.0% | |
| ATTTAGTCCCAAGGATAGAT+AGG | + | chr5_1:38124755-38124774 | Msa0730000:intron | 35.0% | |
| GAGAAGAGTTTATAAAGAGG+AGG | + | chr5_1:38124784-38124803 | Msa0730000:intron | 35.0% | |
| GATTTGCACAAAGCACAAAT+AGG | - | chr5_1:38124991-38125010 | None:intergenic | 35.0% | |
| !!! | AACAACCCTCGTTTTTTAGT+CGG | - | chr5_1:38125035-38125054 | None:intergenic | 35.0% |
| CTAAAAAACGAGGGTTGTTT+AGG | + | chr5_1:38125036-38125055 | Msa0730000:intron | 35.0% | |
| ! | CTTGTCAAATTCTTTTGACC+AGG | + | chr5_1:38125081-38125100 | Msa0730000:intron | 35.0% |
| TAAAACAGTATCACAGTGAG+GGG | - | chr5_1:38125144-38125163 | None:intergenic | 35.0% | |
| AATGCACAATAACTGTCCTA+AGG | - | chr5_1:38125238-38125257 | None:intergenic | 35.0% | |
| !!! | TGTTGGTCAGTTTTTGGTTA+AGG | + | chr5_1:38125323-38125342 | Msa0730000:intron | 35.0% |
| !!! | TCAGTTTTTGGTTAAGGAGT+TGG | + | chr5_1:38125329-38125348 | Msa0730000:intron | 35.0% |
| !!! | TTTTTGGTTAAGGAGTTGGA+AGG | + | chr5_1:38125333-38125352 | Msa0730000:intron | 35.0% |
| !! | TTTTGGTTAAGGAGTTGGAA+GGG | + | chr5_1:38125334-38125353 | Msa0730000:intron | 35.0% |
| GATTCCAAGCTTTCAATACT+TGG | + | chr5_1:38125362-38125381 | Msa0730000:intron | 35.0% | |
| CAAGCTTTCAATACTTGGAA+GGG | + | chr5_1:38125367-38125386 | Msa0730000:intron | 35.0% | |
| TTATATGGTCTTTGTGTGTC+AGG | + | chr5_1:38125661-38125680 | Msa0730000:intron | 35.0% | |
| GCAGAATAGCAAGAAAGAAA+CGG | + | chr5_1:38125722-38125741 | Msa0730000:CDS | 35.0% | |
| TAGGCCTCTAAATGTATGTT+TGG | + | chr5_1:38125841-38125860 | Msa0730000:intron | 35.0% | |
| GACTACCATATATAAGACAC+AGG | - | chr5_1:38125887-38125906 | None:intergenic | 35.0% | |
| TTCAAAAAAAATCACGCACC+AGG | - | chr5_1:38125946-38125965 | None:intergenic | 35.0% | |
| !! | ATACACAAGAGGTTGTTTTC+AGG | + | chr5_1:38126157-38126176 | Msa0730000:intron | 35.0% |
| TTGAGATACAAATAAACGGG+GGG | - | chr5_1:38126380-38126399 | None:intergenic | 35.0% | |
| GTTGAGATACAAATAAACGG+GGG | - | chr5_1:38126381-38126400 | None:intergenic | 35.0% | |
| CGTTGAGATACAAATAAACG+GGG | - | chr5_1:38126382-38126401 | None:intergenic | 35.0% | |
| TTTGGCATCAAAAGTCACAT+TGG | - | chr5_1:38126801-38126820 | None:intergenic | 35.0% | |
| ! | CTTTTGATGCCAAAGAAAGA+AGG | + | chr5_1:38126807-38126826 | Msa0730000:three_prime_UTR | 35.0% |
| ATCTTTCCACCTTCTTTCTT+TGG | - | chr5_1:38126819-38126838 | None:intergenic | 35.0% | |
| CAAACAGACAAACTTGTAGA+TGG | + | chr5_1:38126872-38126891 | Msa0730000:three_prime_UTR | 35.0% | |
| TTTGTGAAAGCAAAGGAAGG+AGG | + | chr5_1:38121185-38121204 | Msa0730000:five_prime_UTR | 40.0% | |
| GCGTTGAAGATCTCTAATGT+TGG | - | chr5_1:38121238-38121257 | None:intergenic | 40.0% | |
| TAGAGATCTTCAACGCGAAT+TGG | + | chr5_1:38121242-38121261 | Msa0730000:CDS | 40.0% | |
| CGATCTCAACAAGCTTCAAA+AGG | + | chr5_1:38121278-38121297 | Msa0730000:CDS | 40.0% | |
| CGAAAATGAGCTCGTTCTTA+AGG | + | chr5_1:38121456-38121475 | Msa0730000:CDS | 40.0% | |
| ! | TTTTACCGAGCTCGTTCATA+TGG | + | chr5_1:38121516-38121535 | Msa0730000:intron | 40.0% |
| ! | CGTTCATATGGTACCCTTTT+AGG | + | chr5_1:38121528-38121547 | Msa0730000:intron | 40.0% |
| ATTGAAGCCAGAACAAAGCT+CGG | - | chr5_1:38121565-38121584 | None:intergenic | 40.0% | |
| !! | AGCTTTGTTCTGGCTTCAAT+TGG | + | chr5_1:38121565-38121584 | Msa0730000:intron | 40.0% |
| !! | GCTTTGTTCTGGCTTCAATT+GGG | + | chr5_1:38121566-38121585 | Msa0730000:intron | 40.0% |
| ! | GGACAGTAGGATTGATTTCT+CGG | + | chr5_1:38121599-38121618 | Msa0730000:intron | 40.0% |
| TGTTAAGCAAGATTTGGCTG+AGG | + | chr5_1:38121957-38121976 | Msa0730000:CDS | 40.0% | |
| TCTCTTGCGAACATTTGCAT+TGG | - | chr5_1:38121983-38122002 | None:intergenic | 40.0% | |
| TGATTTGATTCATCTGGCAC+GGG | + | chr5_1:38122146-38122165 | Msa0730000:intron | 40.0% | |
| CCCCTAATAAACATTCCAAG+TGG | - | chr5_1:38122216-38122235 | None:intergenic | 40.0% | |
| TGCAAACATATCGGGAAGAA+GGG | - | chr5_1:38122315-38122334 | None:intergenic | 40.0% | |
| ATGCAAACATATCGGGAAGA+AGG | - | chr5_1:38122316-38122335 | None:intergenic | 40.0% | |
| CAACACAAGTCAACATTTGG+TGG | - | chr5_1:38122660-38122679 | None:intergenic | 40.0% | |
| CCTCAACACAAGTCAACATT+TGG | - | chr5_1:38122663-38122682 | None:intergenic | 40.0% | |
| !! | CCAAATGTTGACTTGTGTTG+AGG | + | chr5_1:38122660-38122679 | Msa0730000:intron | 40.0% |
| !! | TTGACTTGTGTTGAGGTGTT+TGG | + | chr5_1:38122667-38122686 | Msa0730000:intron | 40.0% |
| ! | GAGGTGTTTGGATAGTGTAT+AGG | + | chr5_1:38122679-38122698 | Msa0730000:intron | 40.0% |
| TGCTGTCCGTTGTAAGTAAA+TGG | + | chr5_1:38122810-38122829 | Msa0730000:intron | 40.0% | |
| CACTCAACATGGGTAAAACT+AGG | - | chr5_1:38122894-38122913 | None:intergenic | 40.0% | |
| !!! | CTAGTTTTACCCATGTTGAG+TGG | + | chr5_1:38122892-38122911 | Msa0730000:intron | 40.0% |
| AGGTGTATGTTAGGAGAGAT+AGG | + | chr5_1:38123016-38123035 | Msa0730000:intron | 40.0% | |
| CTTTCTTTCATTCCCTTCCT+AGG | - | chr5_1:38123150-38123169 | None:intergenic | 40.0% | |
| CTAGGAAGGGAATGAAAGAA+AGG | + | chr5_1:38123148-38123167 | Msa0730000:intron | 40.0% | |
| ATGTGATTAGACATACTGGG+AGG | + | chr5_1:38123190-38123209 | Msa0730000:intron | 40.0% | |
| TGGATGGAGAATAATCTCCT+TGG | + | chr5_1:38123366-38123385 | Msa0730000:intron | 40.0% | |
| ATGGAGAATAATCTCCTTGG+AGG | + | chr5_1:38123369-38123388 | Msa0730000:intron | 40.0% | |
| GAATTGTTGTCACACCAGTA+GGG | - | chr5_1:38123443-38123462 | None:intergenic | 40.0% | |
| TGAATTGTTGTCACACCAGT+AGG | - | chr5_1:38123444-38123463 | None:intergenic | 40.0% | |
| !!! | GGGGAGTTTTTGGAGTTATT+AGG | - | chr5_1:38123483-38123502 | None:intergenic | 40.0% |
| CAATAAGTAGAGAGAAGGAG+GGG | - | chr5_1:38123513-38123532 | None:intergenic | 40.0% | |
| CCAATAAGTAGAGAGAAGGA+GGG | - | chr5_1:38123514-38123533 | None:intergenic | 40.0% | |
| TCCAATAAGTAGAGAGAAGG+AGG | - | chr5_1:38123515-38123534 | None:intergenic | 40.0% | |
| AGAATAACAGAATGGACAGG+TGG | - | chr5_1:38123580-38123599 | None:intergenic | 40.0% | |
| GCAAGAATAACAGAATGGAC+AGG | - | chr5_1:38123583-38123602 | None:intergenic | 40.0% | |
| AGAGAAGACGCTCAAGTATT+AGG | - | chr5_1:38123649-38123668 | None:intergenic | 40.0% | |
| TATAAGAGGAGGGGTAAAAG+AGG | - | chr5_1:38123679-38123698 | None:intergenic | 40.0% | |
| GAAAACAGAGGCTATGGTAT+TGG | - | chr5_1:38123771-38123790 | None:intergenic | 40.0% | |
| ! | ACCATAGCCTCTGTTTTCTT+TGG | + | chr5_1:38123773-38123792 | Msa0730000:intron | 40.0% |
| ACCAAAGAAAACAGAGGCTA+TGG | - | chr5_1:38123777-38123796 | None:intergenic | 40.0% | |
| ! | ATAGCCTCTGTTTTCTTTGG+TGG | + | chr5_1:38123776-38123795 | Msa0730000:intron | 40.0% |
| GTTGAATGATCAGCACATTG+AGG | - | chr5_1:38123811-38123830 | None:intergenic | 40.0% | |
| CTGTAAAGAAGGAAACACAG+CGG | + | chr5_1:38123915-38123934 | Msa0730000:intron | 40.0% | |
| GGAATTGAAACCATATGGCA+GGG | - | chr5_1:38124093-38124112 | None:intergenic | 40.0% | |
| TGAGCGGAATTGAAACCATA+TGG | - | chr5_1:38124098-38124117 | None:intergenic | 40.0% | |
| CCAACATAAACCACACTAAC+AGG | - | chr5_1:38124171-38124190 | None:intergenic | 40.0% | |
| CCTGTTAGTGTGGTTTATGT+TGG | + | chr5_1:38124168-38124187 | Msa0730000:intron | 40.0% | |
| TGGTTTATGTTGGGAGAAGT+TGG | + | chr5_1:38124178-38124197 | Msa0730000:intron | 40.0% | |
| AAACTTTCTGGGTCAGTCAA+AGG | + | chr5_1:38124217-38124236 | Msa0730000:intron | 40.0% | |
| AGAAGGGTTAGAGAACTGTA+AGG | + | chr5_1:38124252-38124271 | Msa0730000:intron | 40.0% | |
| GAAGGGTTAGAGAACTGTAA+GGG | + | chr5_1:38124253-38124272 | Msa0730000:intron | 40.0% | |
| AGAGTAAATTGGTAGGAACG+GGG | - | chr5_1:38124394-38124413 | None:intergenic | 40.0% | |
| GAGAGTAAATTGGTAGGAAC+GGG | - | chr5_1:38124395-38124414 | None:intergenic | 40.0% | |
| AAACTTCCAAGTCAGCAGAT+TGG | - | chr5_1:38124580-38124599 | None:intergenic | 40.0% | |
| !! | AACAAAGATCAAGAGGTGTC+AGG | - | chr5_1:38124607-38124626 | None:intergenic | 40.0% |
| ! | AAACCCAAAGGTCGCAATTT+TGG | - | chr5_1:38124684-38124703 | None:intergenic | 40.0% |
| TGTAATGAAGGCAAACCCAA+AGG | - | chr5_1:38124696-38124715 | None:intergenic | 40.0% | |
| !! | CAACACAATGAAGGTGTTAG+AGG | - | chr5_1:38124720-38124739 | None:intergenic | 40.0% |
| CTCTAACACCTTCATTGTGT+TGG | + | chr5_1:38124718-38124737 | Msa0730000:intron | 40.0% | |
| !! | CTTCATTGTGTTGGCTTTGA+GGG | + | chr5_1:38124727-38124746 | Msa0730000:intron | 40.0% |
| !! | TTCATTGTGTTGGCTTTGAG+GGG | + | chr5_1:38124728-38124747 | Msa0730000:intron | 40.0% |
| CAAGAGTCCTATCTATCCTT+GGG | - | chr5_1:38124765-38124784 | None:intergenic | 40.0% | |
| TCAAGAGTCCTATCTATCCT+TGG | - | chr5_1:38124766-38124785 | None:intergenic | 40.0% | |
| CTAACTCATCCTTGCAAAAC+CGG | - | chr5_1:38124828-38124847 | None:intergenic | 40.0% | |
| !!! | ACAACCCTCGTTTTTTAGTC+GGG | - | chr5_1:38125034-38125053 | None:intergenic | 40.0% |
| !! | CCTTCCAAGTATTGAAAGCT+TGG | - | chr5_1:38125369-38125388 | None:intergenic | 40.0% |
| CCAAGCTTTCAATACTTGGA+AGG | + | chr5_1:38125366-38125385 | Msa0730000:intron | 40.0% | |
| !! | ACGGATTGCTGCATGTTTTA+TGG | + | chr5_1:38125554-38125573 | Msa0730000:intron | 40.0% |
| GTAGATCCTAGCTACTAGAT+AGG | + | chr5_1:38125822-38125841 | Msa0730000:intron | 40.0% | |
| TGGGTCCTGTGTCTTATATA+TGG | + | chr5_1:38125879-38125898 | Msa0730000:intron | 40.0% | |
| CGTACAATACACGAAATGGT+GGG | - | chr5_1:38126121-38126140 | None:intergenic | 40.0% | |
| ACAGAAGATGCAATCTCTTC+AGG | + | chr5_1:38126679-38126698 | Msa0730000:CDS | 40.0% | |
| ACTGTAACTTGACCGTTCAT+AGG | + | chr5_1:38126744-38126763 | Msa0730000:three_prime_UTR | 40.0% | |
| ACTCATTCACCACCTATGAA+CGG | - | chr5_1:38126759-38126778 | None:intergenic | 40.0% | |
| TTGATGCCAAAGAAAGAAGG+TGG | + | chr5_1:38126810-38126829 | Msa0730000:three_prime_UTR | 40.0% | |
| AACTAGAGTGGTTTCTGTCT+TGG | - | chr5_1:38126847-38126866 | None:intergenic | 40.0% | |
| CTGTTTGAGCAAAACTAGAG+TGG | - | chr5_1:38126859-38126878 | None:intergenic | 40.0% | |
| !! | TTCGATTTCTGGCACACTGA+GGG | - | chr5_1:38121165-38121184 | None:intergenic | 45.0% |
| !! | ATTCGATTTCTGGCACACTG+AGG | - | chr5_1:38121166-38121185 | None:intergenic | 45.0% |
| ! | GGTATGGACTGACCCTAAAA+GGG | - | chr5_1:38121544-38121563 | None:intergenic | 45.0% |
| CTTCAATTGGGTTCTGCTAG+TGG | + | chr5_1:38121578-38121597 | Msa0730000:intron | 45.0% | |
| !! | TTCTCGGATTAGTCGGTCTT+TGG | + | chr5_1:38121615-38121634 | Msa0730000:intron | 45.0% |
| !! | TCTCGGATTAGTCGGTCTTT+GGG | + | chr5_1:38121616-38121635 | Msa0730000:intron | 45.0% |
| CGTTAACTGTAGTTACGTCC+AGG | + | chr5_1:38122282-38122301 | Msa0730000:intron | 45.0% | |
| AAACATATCGGGAAGAAGGG+GGG | - | chr5_1:38122312-38122331 | None:intergenic | 45.0% | |
| CAAACATATCGGGAAGAAGG+GGG | - | chr5_1:38122313-38122332 | None:intergenic | 45.0% | |
| GCAAACATATCGGGAAGAAG+GGG | - | chr5_1:38122314-38122333 | None:intergenic | 45.0% | |
| ! | GGGCTGCCATTTACTTACAA+CGG | - | chr5_1:38122819-38122838 | None:intergenic | 45.0% |
| ACCCATGTTGAGTGGTTGTT+CGG | + | chr5_1:38122900-38122919 | Msa0730000:intron | 45.0% | |
| GACTAGAGCCTATAACAAGG+AGG | + | chr5_1:38122929-38122948 | Msa0730000:intron | 45.0% | |
| ! | CCTTAAGGCCTCCTTGTTAT+AGG | - | chr5_1:38122940-38122959 | None:intergenic | 45.0% |
| CCTATAACAAGGAGGCCTTA+AGG | + | chr5_1:38122937-38122956 | Msa0730000:intron | 45.0% | |
| ACAGTAAGGTTGCTGCCTTA+AGG | - | chr5_1:38122955-38122974 | None:intergenic | 45.0% | |
| ! | CTTTGGCTCGTTAGTTTGGA+AGG | + | chr5_1:38123115-38123134 | Msa0730000:intron | 45.0% |
| TGATTAGACATACTGGGAGG+AGG | + | chr5_1:38123193-38123212 | Msa0730000:intron | 45.0% | |
| CCCTCCTTCTCTCTACTTAT+TGG | + | chr5_1:38123511-38123530 | Msa0730000:intron | 45.0% | |
| GGATCATGATTGGAGTGCAA+AGG | - | chr5_1:38123542-38123561 | None:intergenic | 45.0% | |
| AGGGGGCAAGAATAACAGAA+TGG | - | chr5_1:38123588-38123607 | None:intergenic | 45.0% | |
| ! | AAGGAGAAAAGTGTGCACAG+GGG | - | chr5_1:38123606-38123625 | None:intergenic | 45.0% |
| ! | GAAGGAGAAAAGTGTGCACA+GGG | - | chr5_1:38123607-38123626 | None:intergenic | 45.0% |
| ! | AGAAGGAGAAAAGTGTGCAC+AGG | - | chr5_1:38123608-38123627 | None:intergenic | 45.0% |
| CAAGTATTAGGAGGACAGCT+GGG | - | chr5_1:38123637-38123656 | None:intergenic | 45.0% | |
| TCAAGTATTAGGAGGACAGC+TGG | - | chr5_1:38123638-38123657 | None:intergenic | 45.0% | |
| GAAGACGCTCAAGTATTAGG+AGG | - | chr5_1:38123646-38123665 | None:intergenic | 45.0% | |
| !! | ATGGTATTGGTAGTGGCTCT+GGG | - | chr5_1:38123758-38123777 | None:intergenic | 45.0% |
| !! | TATGGTATTGGTAGTGGCTC+TGG | - | chr5_1:38123759-38123778 | None:intergenic | 45.0% |
| !! | AGAGGCTATGGTATTGGTAG+TGG | - | chr5_1:38123765-38123784 | None:intergenic | 45.0% |
| GATGCCACCAAAGAAAACAG+AGG | - | chr5_1:38123783-38123802 | None:intergenic | 45.0% | |
| TCACCCTTCTCGCAAATCTT+TGG | + | chr5_1:38123840-38123859 | Msa0730000:intron | 45.0% | |
| CGTCCAAAGATTTGCGAGAA+GGG | - | chr5_1:38123846-38123865 | None:intergenic | 45.0% | |
| TCGTCCAAAGATTTGCGAGA+AGG | - | chr5_1:38123847-38123866 | None:intergenic | 45.0% | |
| ! | TCTCTATAGGAGTCTAGCTC+TGG | - | chr5_1:38123958-38123977 | None:intergenic | 45.0% |
| ATATGGCAGGGAGTTTGAGA+GGG | - | chr5_1:38124081-38124100 | None:intergenic | 45.0% | |
| CGGAATTGAAACCATATGGC+AGG | - | chr5_1:38124094-38124113 | None:intergenic | 45.0% | |
| AACCTTCCACATATTGGGCA+TGG | + | chr5_1:38124135-38124154 | Msa0730000:intron | 45.0% | |
| ACCTTCCACATATTGGGCAT+GGG | + | chr5_1:38124136-38124155 | Msa0730000:intron | 45.0% | |
| AGTCAGCAGATTGGAAAGCA+GGG | - | chr5_1:38124571-38124590 | None:intergenic | 45.0% | |
| AAGTCAGCAGATTGGAAAGC+AGG | - | chr5_1:38124572-38124591 | None:intergenic | 45.0% | |
| ! | TGCTTTCCAATCTGCTGACT+TGG | + | chr5_1:38124571-38124590 | Msa0730000:intron | 45.0% |
| TCGCCAAAATTGCGACCTTT+GGG | + | chr5_1:38124678-38124697 | Msa0730000:intron | 45.0% | |
| GGTGTTAGAGGCTGTAATGA+AGG | - | chr5_1:38124708-38124727 | None:intergenic | 45.0% | |
| CCTCAAAGCCAACACAATGA+AGG | - | chr5_1:38124729-38124748 | None:intergenic | 45.0% | |
| !! | CCTTCATTGTGTTGGCTTTG+AGG | + | chr5_1:38124726-38124745 | Msa0730000:intron | 45.0% |
| !! | TCATTGTGTTGGCTTTGAGG+GGG | + | chr5_1:38124729-38124748 | Msa0730000:intron | 45.0% |
| ! | CGGTTTTGCAAGGATGAGTT+AGG | + | chr5_1:38124826-38124845 | Msa0730000:intron | 45.0% |
| !!! | CTCGTTTTTTAGTCGGGCTT+GGG | - | chr5_1:38125028-38125047 | None:intergenic | 45.0% |
| CAAGCCCGACTAAAAAACGA+GGG | + | chr5_1:38125027-38125046 | Msa0730000:intron | 45.0% | |
| ! | AGGATAGATGTTGGTTAGCG+TGG | - | chr5_1:38125111-38125130 | None:intergenic | 45.0% |
| AGGACAGCAAGGATAGATGT+TGG | - | chr5_1:38125120-38125139 | None:intergenic | 45.0% | |
| TGATGCCACGGTTCAAGATT+TGG | + | chr5_1:38125692-38125711 | Msa0730000:CDS | 45.0% | |
| CTCTTCCAAATCTTGAACCG+TGG | - | chr5_1:38125700-38125719 | None:intergenic | 45.0% | |
| TAGAGGCCTATCTAGTAGCT+AGG | - | chr5_1:38125831-38125850 | None:intergenic | 45.0% | |
| GTCTTAATGCCATCCCTGTT+CGG | + | chr5_1:38125904-38125923 | Msa0730000:intron | 45.0% | |
| ACACACACTGTGTTCGGAAA+GGG | + | chr5_1:38126093-38126112 | Msa0730000:intron | 45.0% | |
| GCGTACAATACACGAAATGG+TGG | - | chr5_1:38126122-38126141 | None:intergenic | 45.0% | |
| GCTGCGTACAATACACGAAA+TGG | - | chr5_1:38126125-38126144 | None:intergenic | 45.0% | |
| GTTGTTGCCATGTGACTGAA+AGG | - | chr5_1:38126197-38126216 | None:intergenic | 45.0% | |
| CTTGTGACCTTTCAGTCACA+TGG | + | chr5_1:38126222-38126241 | Msa0730000:intron | 45.0% | |
| TGAAACGAAAGAGAGAGCCT+TGG | - | chr5_1:38126267-38126286 | None:intergenic | 45.0% | |
| AAGATGCAATCTCTTCAGGC+TGG | + | chr5_1:38126683-38126702 | Msa0730000:CDS | 45.0% | |
| AGATGCAATCTCTTCAGGCT+GGG | + | chr5_1:38126684-38126703 | Msa0730000:CDS | 45.0% | |
| AATCTCTTCAGGCTGGGAAA+GGG | + | chr5_1:38126690-38126709 | Msa0730000:CDS | 45.0% | |
| GTAACTTGACCGTTCATAGG+TGG | + | chr5_1:38126747-38126766 | Msa0730000:three_prime_UTR | 45.0% | |
| GTGAAAGCAAAGGAAGGAGG+AGG | + | chr5_1:38121188-38121207 | Msa0730000:five_prime_UTR | 50.0% | |
| GGGTACCATATGAACGAGCT+CGG | - | chr5_1:38121524-38121543 | None:intergenic | 50.0% | |
| ! | CGGTATGGACTGACCCTAAA+AGG | - | chr5_1:38121545-38121564 | None:intergenic | 50.0% |
| !! | GTCCATACCGAGCTTTGTTC+TGG | + | chr5_1:38121555-38121574 | Msa0730000:intron | 50.0% |
| AGCCAGAACAAAGCTCGGTA+TGG | - | chr5_1:38121560-38121579 | None:intergenic | 50.0% | |
| GACAGCGCCATCACACATTT+AGG | + | chr5_1:38121804-38121823 | Msa0730000:intron | 50.0% | |
| AACATATCGGGAAGAAGGGG+GGG | - | chr5_1:38122311-38122330 | None:intergenic | 50.0% | |
| GCCGAACAACCACTCAACAT+GGG | - | chr5_1:38122904-38122923 | None:intergenic | 50.0% | |
| AGCCGAACAACCACTCAACA+TGG | - | chr5_1:38122905-38122924 | None:intergenic | 50.0% | |
| ! | TGGCTCGTTAGTTTGGAAGG+AGG | + | chr5_1:38123118-38123137 | Msa0730000:intron | 50.0% |
| !! | TTGGAAGGAGGAGAGTACCT+AGG | + | chr5_1:38123130-38123149 | Msa0730000:intron | 50.0% |
| !! | AAGGAGGAGAGTACCTAGGA+AGG | + | chr5_1:38123134-38123153 | Msa0730000:intron | 50.0% |
| !! | AGGAGGAGAGTACCTAGGAA+GGG | + | chr5_1:38123135-38123154 | Msa0730000:intron | 50.0% |
| !! | TCACTATGAGAGCACCCTAC+TGG | + | chr5_1:38123426-38123445 | Msa0730000:intron | 50.0% |
| ! | GGGAAGGAAAGGGGAGTTTT+TGG | - | chr5_1:38123493-38123512 | None:intergenic | 50.0% |
| AGAGAAGGAGGGGAAGGAAA+GGG | - | chr5_1:38123503-38123522 | None:intergenic | 50.0% | |
| AAGTAGAGAGAAGGAGGGGA+AGG | - | chr5_1:38123509-38123528 | None:intergenic | 50.0% | |
| AGGTGGCAAGCAAGGATTTG+AGG | - | chr5_1:38123563-38123582 | None:intergenic | 50.0% | |
| ! | AGGAGAAAAGTGTGCACAGG+GGG | - | chr5_1:38123605-38123624 | None:intergenic | 50.0% |
| GGACAGCTGGGAGTAAAAGA+AGG | - | chr5_1:38123625-38123644 | None:intergenic | 50.0% | |
| !! | TGGCTCTGGGGAGAAAGAAA+TGG | - | chr5_1:38123745-38123764 | None:intergenic | 50.0% |
| !! | TGGTATTGGTAGTGGCTCTG+GGG | - | chr5_1:38123757-38123776 | None:intergenic | 50.0% |
| TATGGCAGGGAGTTTGAGAG+GGG | - | chr5_1:38124080-38124099 | None:intergenic | 50.0% | |
| CATATGGCAGGGAGTTTGAG+AGG | - | chr5_1:38124082-38124101 | None:intergenic | 50.0% | |
| CTCTCAAACTCCCTGCCATA+TGG | + | chr5_1:38124080-38124099 | Msa0730000:intron | 50.0% | |
| GCTGCTTATCCCTGTTAGTG+TGG | + | chr5_1:38124158-38124177 | Msa0730000:intron | 50.0% | |
| GAGAAGTTGGACAGAAGCAG+AGG | + | chr5_1:38124191-38124210 | Msa0730000:intron | 50.0% | |
| ! | GCAGAATCACTGGCTGGAAA+TGG | - | chr5_1:38124544-38124563 | None:intergenic | 50.0% |
| ! | GGTTTTGCAGAATCACTGGC+TGG | - | chr5_1:38124550-38124569 | None:intergenic | 50.0% |
| ! | GCAGGGTTTTGCAGAATCAC+TGG | - | chr5_1:38124554-38124573 | None:intergenic | 50.0% |
| !! | GTCGCAATTTTGGCGACTAG+GGG | - | chr5_1:38124674-38124693 | None:intergenic | 50.0% |
| !! | GGTCGCAATTTTGGCGACTA+GGG | - | chr5_1:38124675-38124694 | None:intergenic | 50.0% |
| !! | AGGTCGCAATTTTGGCGACT+AGG | - | chr5_1:38124676-38124695 | None:intergenic | 50.0% |
| GTCGCCAAAATTGCGACCTT+TGG | + | chr5_1:38124677-38124696 | Msa0730000:intron | 50.0% | |
| !! | CAAAACCGGCTTGTAAGGTG+AGG | - | chr5_1:38124814-38124833 | None:intergenic | 50.0% |
| !! | CCTTGCAAAACCGGCTTGTA+AGG | - | chr5_1:38124819-38124838 | None:intergenic | 50.0% |
| !! | CCTTACAAGCCGGTTTTGCA+AGG | + | chr5_1:38124816-38124835 | Msa0730000:intron | 50.0% |
| !!! | CCTCGTTTTTTAGTCGGGCT+TGG | - | chr5_1:38125029-38125048 | None:intergenic | 50.0% |
| CCAAGCCCGACTAAAAAACG+AGG | + | chr5_1:38125026-38125045 | Msa0730000:intron | 50.0% | |
| ACAGTATCACAGTGAGGGGA+AGG | - | chr5_1:38125140-38125159 | None:intergenic | 50.0% | |
| AGACCAAAACAGGCCTGAAC+TGG | + | chr5_1:38125211-38125230 | Msa0730000:intron | 50.0% | |
| ACTGTCCTAAGGACCAGTTC+AGG | - | chr5_1:38125227-38125246 | None:intergenic | 50.0% | |
| TTCAAGGGAACAGCCGAACA+GGG | - | chr5_1:38125920-38125939 | None:intergenic | 50.0% | |
| ATTCAAGGGAACAGCCGAAC+AGG | - | chr5_1:38125921-38125940 | None:intergenic | 50.0% | |
| TGTTCGGCTGTTCCCTTGAA+TGG | + | chr5_1:38125920-38125939 | Msa0730000:intron | 50.0% | |
| AAGTGTAGAAAAGGGCAGCC+CGG | + | chr5_1:38126054-38126073 | Msa0730000:intron | 50.0% | |
| TTCCGAACACAGTGTGTGTG+CGG | - | chr5_1:38126092-38126111 | None:intergenic | 50.0% | |
| CACACACACTGTGTTCGGAA+AGG | + | chr5_1:38126092-38126111 | Msa0730000:intron | 50.0% | |
| CACACACTGTGTTCGGAAAG+GGG | + | chr5_1:38126094-38126113 | Msa0730000:intron | 50.0% | |
| CCATGTGACTGAAAGGTCAC+GGG | - | chr5_1:38126190-38126209 | None:intergenic | 50.0% | |
| GCCATGTGACTGAAAGGTCA+CGG | - | chr5_1:38126191-38126210 | None:intergenic | 50.0% | |
| GCTGTTGCCATGTGACTGAA+AGG | - | chr5_1:38126232-38126251 | None:intergenic | 50.0% | |
| ! | ACAGCTTTATCGTTGCGCCA+AGG | + | chr5_1:38126247-38126266 | Msa0730000:intron | 50.0% |
| CAATCTCTTCAGGCTGGGAA+AGG | + | chr5_1:38126689-38126708 | Msa0730000:CDS | 50.0% | |
| ! | GGGTTCTGCTAGTGGACAGT+AGG | + | chr5_1:38121586-38121605 | Msa0730000:intron | 55.0% |
| GAGAAGGAGGGGAAGGAAAG+GGG | - | chr5_1:38123502-38123521 | None:intergenic | 55.0% | |
| GAGAGAAGGAGGGGAAGGAA+AGG | - | chr5_1:38123504-38123523 | None:intergenic | 55.0% | |
| GAATGGACAGGTGGCAAGCA+AGG | - | chr5_1:38123571-38123590 | None:intergenic | 55.0% | |
| !! | AGGAGTCTAGCTCTGGCAGT+AGG | - | chr5_1:38123951-38123970 | None:intergenic | 55.0% |
| !! | AGGGTGCTGAGAAGAGAGAG+AGG | - | chr5_1:38124026-38124045 | None:intergenic | 55.0% |
| GCCCATGCCCAATATGTGGA+AGG | - | chr5_1:38124140-38124159 | None:intergenic | 55.0% | |
| AGCAGCCCATGCCCAATATG+TGG | - | chr5_1:38124144-38124163 | None:intergenic | 55.0% | |
| !! | GCAATTTTGGCGACTAGGGG+CGG | - | chr5_1:38124671-38124690 | None:intergenic | 55.0% |
| !! | TTGTGTTGGCTTTGAGGGGG+TGG | + | chr5_1:38124732-38124751 | Msa0730000:intron | 55.0% |
| ! | AGGGGGTGGATTTAGTCCCA+AGG | + | chr5_1:38124746-38124765 | Msa0730000:intron | 55.0% |
| GCACTCCTCACCTTACAAGC+CGG | + | chr5_1:38124806-38124825 | Msa0730000:intron | 55.0% | |
| ! | GGACCAGTTCAGGCCTGTTT+TGG | - | chr5_1:38125217-38125236 | None:intergenic | 55.0% |
| ACAGGCCTGAACTGGTCCTT+AGG | + | chr5_1:38125219-38125238 | Msa0730000:intron | 55.0% | |
| !! | CAGGAAGCGTCTTGATGCCA+CGG | + | chr5_1:38125680-38125699 | Msa0730000:intron | 55.0% |
| TCACGCACCAGGCCATTCAA+GGG | - | chr5_1:38125935-38125954 | None:intergenic | 55.0% | |
| ATCACGCACCAGGCCATTCA+AGG | - | chr5_1:38125936-38125955 | None:intergenic | 55.0% | |
| TCCCGCACACACACTGTGTT+CGG | + | chr5_1:38126087-38126106 | Msa0730000:intron | 55.0% | |
| TCCGAACACAGTGTGTGTGC+GGG | - | chr5_1:38126091-38126110 | None:intergenic | 55.0% | |
| CCCGTGACCTTTCAGTCACA+TGG | + | chr5_1:38126187-38126206 | Msa0730000:intron | 55.0% | |
| TCTTCAGGCTGGGAAAGGGA+AGG | + | chr5_1:38126694-38126713 | Msa0730000:CDS | 55.0% | |
| GAGGGGAGCAAACAGTGCAG+AGG | - | chr5_1:38124063-38124082 | None:intergenic | 60.0% | |
| CTAGGGGCGGACCGCAATTA+AGG | - | chr5_1:38124658-38124677 | None:intergenic | 60.0% | |
| GTTGGTTAGCGTGGTGTGCC+TGG | - | chr5_1:38125102-38125121 | None:intergenic | 60.0% | |
| CAGTGAGGGGAAGGACAGCA+AGG | - | chr5_1:38125131-38125150 | None:intergenic | 60.0% | |
| AGGGAACAGCCGAACAGGGA+TGG | - | chr5_1:38125916-38125935 | None:intergenic | 60.0% | |
| GGCTGTTCCCTTGAATGGCC+TGG | + | chr5_1:38125925-38125944 | Msa0730000:intron | 60.0% | |
| ! | TGTGCGGGAGCTTTGTGCAC+CGG | - | chr5_1:38126076-38126095 | None:intergenic | 60.0% |
| GGGGCGGACCGCAATTAAGG+CGG | - | chr5_1:38124655-38124674 | None:intergenic | 65.0% | |
| ! | GTGCGGGAGCTTTGTGCACC+GGG | - | chr5_1:38126075-38126094 | None:intergenic | 65.0% |
| !! | GGGAAGAAGGGGGGGCATCC+TGG | - | chr5_1:38122303-38122322 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_1 | gene | 38121152 | 38127065 | 38121152 | ID=Msa0730000;Name=Msa0730000 |
| chr5_1 | mRNA | 38121152 | 38127065 | 38121152 | ID=Msa0730000-mRNA-1;Parent=Msa0730000;Name=Msa0730000-mRNA-1;_AED=0.00;_eAED=0.00;_QI=73|1|1|1|1|1|5|344|129 |
| chr5_1 | exon | 38121152 | 38121300 | 38121152 | ID=Msa0730000-mRNA-1:exon:11453;Parent=Msa0730000-mRNA-1 |
| chr5_1 | exon | 38121407 | 38121477 | 38121407 | ID=Msa0730000-mRNA-1:exon:11454;Parent=Msa0730000-mRNA-1 |
| chr5_1 | exon | 38121901 | 38122025 | 38121901 | ID=Msa0730000-mRNA-1:exon:11455;Parent=Msa0730000-mRNA-1 |
| chr5_1 | exon | 38125683 | 38125743 | 38125683 | ID=Msa0730000-mRNA-1:exon:11456;Parent=Msa0730000-mRNA-1 |
| chr5_1 | exon | 38126665 | 38127065 | 38126665 | ID=Msa0730000-mRNA-1:exon:11457;Parent=Msa0730000-mRNA-1 |
| chr5_1 | five_prime_UTR | 38121152 | 38121224 | 38121152 | ID=Msa0730000-mRNA-1:five_prime_utr;Parent=Msa0730000-mRNA-1 |
| chr5_1 | CDS | 38121225 | 38121300 | 38121225 | ID=Msa0730000-mRNA-1:cds;Parent=Msa0730000-mRNA-1 |
| chr5_1 | CDS | 38121407 | 38121477 | 38121407 | ID=Msa0730000-mRNA-1:cds;Parent=Msa0730000-mRNA-1 |
| chr5_1 | CDS | 38121901 | 38122025 | 38121901 | ID=Msa0730000-mRNA-1:cds;Parent=Msa0730000-mRNA-1 |
| chr5_1 | CDS | 38125683 | 38125743 | 38125683 | ID=Msa0730000-mRNA-1:cds;Parent=Msa0730000-mRNA-1 |
| chr5_1 | CDS | 38126665 | 38126721 | 38126665 | ID=Msa0730000-mRNA-1:cds;Parent=Msa0730000-mRNA-1 |
| chr5_1 | three_prime_UTR | 38126722 | 38127065 | 38126722 | ID=Msa0730000-mRNA-1:three_prime_utr;Parent=Msa0730000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
