Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661090 | XP_013456162.1 | 82.292 | 96 | 17 | 0 | 1 | 96 | 1 | 96 | 6.54e-47 | 155 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661090 | sp|P83941|ELOC_RAT | 50.746 | 67 | 33 | 0 | 7 | 73 | 19 | 85 | 4.63e-18 | 75.9 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661090 | I3SR24 | 82.292 | 96 | 17 | 0 | 1 | 96 | 1 | 96 | 3.13e-47 | 155 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004860 | Msa0661090 | 0.809361 | 1.965913e-50 | -8.615850e-47 |
| Msa0006880 | Msa0661090 | 0.811279 | 7.581407e-51 | -8.615850e-47 |
| Msa0008410 | Msa0661090 | 0.807514 | 4.870854e-50 | -8.615850e-47 |
| Msa0008840 | Msa0661090 | 0.816628 | 5.013106e-52 | -8.615850e-47 |
| Msa0018620 | Msa0661090 | 0.824573 | 7.501610e-54 | -8.615850e-47 |
| Msa0026660 | Msa0661090 | 0.833868 | 4.163570e-56 | -8.615850e-47 |
| Msa0029260 | Msa0661090 | 0.821582 | 3.739517e-53 | -8.615850e-47 |
| Msa0032260 | Msa0661090 | 0.806732 | 7.130530e-50 | -8.615850e-47 |
| Msa0033880 | Msa0661090 | 0.844469 | 7.414223e-59 | -8.615850e-47 |
| Msa0037840 | Msa0661090 | 0.819949 | 8.875823e-53 | -8.615850e-47 |
| Msa0038870 | Msa0661090 | 0.811383 | 7.196404e-51 | -8.615850e-47 |
| Msa0043730 | Msa0661090 | 0.804418 | 2.180995e-49 | -8.615850e-47 |
| Msa0047250 | Msa0661090 | 0.809728 | 1.639352e-50 | -8.615850e-47 |
| Msa0052860 | Msa0661090 | 0.815050 | 1.127299e-51 | -8.615850e-47 |
| Msa0055100 | Msa0661090 | 0.822092 | 2.849440e-53 | -8.615850e-47 |
| Msa0055150 | Msa0661090 | 0.827936 | 1.187614e-54 | -8.615850e-47 |
| Msa0057140 | Msa0661090 | 0.842175 | 3.036442e-58 | -8.615850e-47 |
| Msa0057750 | Msa0661090 | 0.820329 | 7.266860e-53 | -8.615850e-47 |
| Msa0061970 | Msa0661090 | 0.801332 | 9.464259e-49 | -8.615850e-47 |
| Msa0064350 | Msa0661090 | 0.809309 | 2.017111e-50 | -8.615850e-47 |
| Msa0074750 | Msa0661090 | 0.801551 | 8.534678e-49 | -8.615850e-47 |
| Msa0076000 | Msa0661090 | 0.809619 | 1.729945e-50 | -8.615850e-47 |
| Msa0077900 | Msa0661090 | 0.801968 | 7.008410e-49 | -8.615850e-47 |
| Msa0084430 | Msa0661090 | 0.810137 | 1.338327e-50 | -8.615850e-47 |
| Msa0090030 | Msa0661090 | 0.800694 | 1.278188e-48 | -8.615850e-47 |
| Msa0091500 | Msa0661090 | 0.800947 | 1.134704e-48 | -8.615850e-47 |
| Msa0092170 | Msa0661090 | 0.804629 | 1.971171e-49 | -8.615850e-47 |
| Msa0094920 | Msa0661090 | 0.810785 | 9.700083e-51 | -8.615850e-47 |
| Msa0097590 | Msa0661090 | 0.800938 | 1.139444e-48 | -8.615850e-47 |
| Msa0097610 | Msa0661090 | 0.802171 | 6.366628e-49 | -8.615850e-47 |
| Msa0100800 | Msa0661090 | 0.807528 | 4.837879e-50 | -8.615850e-47 |
| Msa0101180 | Msa0661090 | 0.814751 | 1.313605e-51 | -8.615850e-47 |
| Msa0103070 | Msa0661090 | 0.820121 | 8.108905e-53 | -8.615850e-47 |
| Msa0115370 | Msa0661090 | 0.808238 | 3.416631e-50 | -8.615850e-47 |
| Msa0115460 | Msa0661090 | 0.801665 | 8.090083e-49 | -8.615850e-47 |
| Msa0603670 | Msa0661090 | 0.822472 | 2.325601e-53 | -8.615850e-47 |
| Msa0609000 | Msa0661090 | 0.804133 | 2.499941e-49 | -8.615850e-47 |
| Msa0610390 | Msa0661090 | 0.825781 | 3.886439e-54 | -8.615850e-47 |
| Msa0617260 | Msa0661090 | 0.821522 | 3.861595e-53 | -8.615850e-47 |
| Msa0617580 | Msa0661090 | 0.816724 | 4.771496e-52 | -8.615850e-47 |
| Msa0619920 | Msa0661090 | 0.814956 | 1.182910e-51 | -8.615850e-47 |
| Msa0620330 | Msa0661090 | 0.842039 | 3.298768e-58 | -8.615850e-47 |
| Msa0620620 | Msa0661090 | 0.824058 | 9.912325e-54 | -8.615850e-47 |
| Msa0623700 | Msa0661090 | 0.807232 | 5.590158e-50 | -8.615850e-47 |
| Msa0626220 | Msa0661090 | 0.808795 | 2.598321e-50 | -8.615850e-47 |
| Msa0628290 | Msa0661090 | 0.824324 | 8.586930e-54 | -8.615850e-47 |
| Msa0630950 | Msa0661090 | 0.819169 | 1.337407e-52 | -8.615850e-47 |
| Msa0650920 | Msa0661090 | 0.819840 | 9.402910e-53 | -8.615850e-47 |
| Msa0652300 | Msa0661090 | 0.826779 | 2.249665e-54 | -8.615850e-47 |
| Msa0661090 | Msa0679550 | 0.800713 | 1.266406e-48 | -8.615850e-47 |
| Msa0661090 | Msa0686080 | 0.808353 | 3.229718e-50 | -8.615850e-47 |
| Msa0661090 | Msa0687020 | 0.819557 | 1.091196e-52 | -8.615850e-47 |
| Msa0661090 | Msa0687630 | 0.803750 | 3.002679e-49 | -8.615850e-47 |
| Msa0661090 | Msa0692840 | 0.802460 | 5.553122e-49 | -8.615850e-47 |
| Msa0661090 | Msa0692940 | 0.806225 | 9.119979e-50 | -8.615850e-47 |
| Msa0661090 | Msa0694840 | 0.847920 | 8.518269e-60 | -8.615850e-47 |
| Msa0661090 | Msa0696450 | 0.801445 | 8.975168e-49 | -8.615850e-47 |
| Msa0661090 | Msa0697720 | 0.805939 | 1.047511e-49 | -8.615850e-47 |
| Msa0661090 | Msa0706390 | 0.815331 | 9.763317e-52 | -8.615850e-47 |
| Msa0661090 | Msa0711100 | 0.803754 | 2.998146e-49 | -8.615850e-47 |
| Msa0661090 | Msa0716960 | 0.808878 | 2.493726e-50 | -8.615850e-47 |
| Msa0661090 | Msa0717010 | 0.807220 | 5.621819e-50 | -8.615850e-47 |
| Msa0661090 | Msa0724150 | 0.808158 | 3.553857e-50 | -8.615850e-47 |
| Msa0661090 | Msa0726080 | 0.858006 | 1.107370e-62 | -8.615850e-47 |
| Msa0661090 | Msa0726830 | 0.805628 | 1.217838e-49 | -8.615850e-47 |
| Msa0661090 | Msa0726860 | 0.819433 | 1.164276e-52 | -8.615850e-47 |
| Msa0661090 | Msa0730000 | 0.824080 | 9.795776e-54 | -8.615850e-47 |
| Msa0661090 | Msa0735310 | 0.821704 | 3.503821e-53 | -8.615850e-47 |
| Msa0661090 | Msa0743530 | 0.809096 | 2.240523e-50 | -8.615850e-47 |
| Msa0661090 | Msa0743740 | 0.812799 | 3.534330e-51 | -8.615850e-47 |
| Msa0661090 | Msa0745200 | 0.824901 | 6.278968e-54 | -8.615850e-47 |
| Msa0661090 | Msa0750430 | 0.824743 | 6.842583e-54 | -8.615850e-47 |
| Msa0661090 | Msa0777320 | 0.815555 | 8.705015e-52 | -8.615850e-47 |
| Msa0661090 | Msa0780880 | 0.826852 | 2.160755e-54 | -8.615850e-47 |
| Msa0661090 | Msa0781270 | 0.831094 | 2.028334e-55 | -8.615850e-47 |
| Msa0661090 | Msa0784380 | 0.833180 | 6.183512e-56 | -8.615850e-47 |
| Msa0661090 | Msa0793390 | 0.808237 | 3.417535e-50 | -8.615850e-47 |
| Msa0661090 | Msa0797750 | 0.823233 | 1.546290e-53 | -8.615850e-47 |
| Msa0661090 | Msa0805500 | 0.800137 | 1.659333e-48 | -8.615850e-47 |
| Msa0661090 | Msa0806920 | 0.809761 | 1.612989e-50 | -8.615850e-47 |
| Msa0661090 | Msa0812140 | 0.815340 | 9.718371e-52 | -8.615850e-47 |
| Msa0661090 | Msa0814250 | 0.827320 | 1.670012e-54 | -8.615850e-47 |
| Msa0661090 | Msa0814320 | 0.845342 | 4.311820e-59 | -8.615850e-47 |
| Msa0661090 | Msa0818170 | 0.801154 | 1.029297e-48 | -8.615850e-47 |
| Msa0661090 | Msa0823500 | 0.846641 | 1.912059e-59 | -8.615850e-47 |
| Msa0661090 | Msa0826760 | 0.813396 | 2.615127e-51 | -8.615850e-47 |
| Msa0661090 | Msa0827280 | 0.842207 | 2.976435e-58 | -8.615850e-47 |
| Msa0661090 | Msa0828680 | 0.802385 | 5.752378e-49 | -8.615850e-47 |
| Msa0661090 | Msa0836500 | 0.804254 | 2.359190e-49 | -8.615850e-47 |
| Msa0661090 | Msa0837780 | 0.806015 | 1.009747e-49 | -8.615850e-47 |
| Msa0661090 | Msa0842830 | 0.803312 | 3.701390e-49 | -8.615850e-47 |
| Msa0661090 | Msa0844230 | 0.835421 | 1.694912e-56 | -8.615850e-47 |
| Msa0661090 | Msa0846230 | 0.853414 | 2.427372e-61 | -8.615850e-47 |
| Msa0661090 | Msa0852390 | 0.800461 | 1.426060e-48 | -8.615850e-47 |
| Msa0661090 | Msa0858440 | 0.803499 | 3.386631e-49 | -8.615850e-47 |
| Msa0661090 | Msa0862500 | 0.846801 | 1.728954e-59 | -8.615850e-47 |
| Msa0661090 | Msa0865570 | 0.812702 | 3.712590e-51 | -8.615850e-47 |
| Msa0661090 | Msa0876200 | 0.808514 | 2.982822e-50 | -8.615850e-47 |
| Msa0661090 | Msa0896290 | 0.827875 | 1.228819e-54 | -8.615850e-47 |
| Msa0661090 | Msa0899290 | 0.800056 | 1.723400e-48 | -8.615850e-47 |
| Msa0661090 | Msa0899350 | 0.814046 | 1.880939e-51 | -8.615850e-47 |
| Msa0661090 | Msa0928120 | 0.805325 | 1.409812e-49 | -8.615850e-47 |
| Msa0661090 | Msa0930140 | 0.801148 | 1.032090e-48 | -8.615850e-47 |
| Msa0661090 | Msa0960830 | 0.810851 | 9.382769e-51 | -8.615850e-47 |
| Msa0661090 | Msa0967370 | 0.836342 | 9.898822e-57 | -8.615850e-47 |
| Msa0661090 | Msa0971020 | 0.833926 | 4.027389e-56 | -8.615850e-47 |
| Msa0661090 | Msa1013040 | 0.835557 | 1.565597e-56 | -8.615850e-47 |
| Msa0661090 | Msa1024750 | 0.806633 | 7.482542e-50 | -8.615850e-47 |
| Msa0661090 | Msa1025260 | 0.827051 | 1.936841e-54 | -8.615850e-47 |
| Msa0661090 | Msa1025940 | 0.846885 | 1.639294e-59 | -8.615850e-47 |
| Msa0661090 | Msa1040800 | 0.807610 | 4.648223e-50 | -8.615850e-47 |
| Msa0661090 | Msa1040890 | 0.804321 | 2.284868e-49 | -8.615850e-47 |
| Msa0661090 | Msa1046020 | 0.808971 | 2.382575e-50 | -8.615850e-47 |
| Msa0661090 | Msa1046060 | 0.803699 | 3.077714e-49 | -8.615850e-47 |
| Msa0661090 | Msa1050420 | 0.807567 | 4.744896e-50 | -8.615850e-47 |
| Msa0661090 | Msa1054010 | 0.809710 | 1.654126e-50 | -8.615850e-47 |
| Msa0661090 | Msa1063510 | 0.800084 | 1.701280e-48 | -8.615850e-47 |
| Msa0661090 | Msa1083880 | 0.802408 | 5.690169e-49 | -8.615850e-47 |
| Msa0661090 | Msa1089320 | 0.833552 | 4.994104e-56 | -8.615850e-47 |
| Msa0661090 | Msa1089840 | 0.830208 | 3.341770e-55 | -8.615850e-47 |
| Msa0661090 | Msa1091100 | 0.814781 | 1.293502e-51 | -8.615850e-47 |
| Msa0661090 | Msa1100720 | 0.802635 | 5.108793e-49 | -8.615850e-47 |
| Msa0661090 | Msa1101580 | 0.850369 | 1.775153e-60 | -8.615850e-47 |
| Msa0661090 | Msa1109350 | 0.823747 | 1.172512e-53 | -8.615850e-47 |
| Msa0661090 | Msa1113590 | 0.801588 | 8.388504e-49 | -8.615850e-47 |
| Msa0661090 | Msa1125470 | 0.805275 | 1.444017e-49 | -8.615850e-47 |
| Msa0661090 | Msa1125550 | 0.805626 | 1.218866e-49 | -8.615850e-47 |
| Msa0661090 | Msa1127830 | 0.812275 | 4.602491e-51 | -8.615850e-47 |
| Msa0661090 | Msa1134090 | 0.818441 | 1.957029e-52 | -8.615850e-47 |
| Msa0661090 | Msa1135810 | -0.806091 | 9.735672e-50 | -8.615850e-47 |
| Msa0661090 | Msa1138520 | 0.810591 | 1.068057e-50 | -8.615850e-47 |
| Msa0661090 | Msa1144970 | 0.818082 | 2.359659e-52 | -8.615850e-47 |
| Msa0661090 | Msa1152520 | 0.822244 | 2.627315e-53 | -8.615850e-47 |
| Msa0661090 | Msa1158770 | 0.802215 | 6.235221e-49 | -8.615850e-47 |
| Msa0661090 | Msa1171830 | 0.809375 | 1.951692e-50 | -8.615850e-47 |
| Msa0661090 | Msa1178050 | 0.823446 | 1.378796e-53 | -8.615850e-47 |
| Msa0661090 | Msa1184370 | 0.814057 | 1.869996e-51 | -8.615850e-47 |
| Msa0661090 | Msa1185170 | 0.801654 | 8.129710e-49 | -8.615850e-47 |
| Msa0661090 | Msa1201830 | 0.813209 | 2.874041e-51 | -8.615850e-47 |
| Msa0661090 | Msa1203880 | 0.827540 | 1.479127e-54 | -8.615850e-47 |
| Msa0661090 | Msa1203900 | 0.807538 | 4.814228e-50 | -8.615850e-47 |
| Msa0661090 | Msa1206650 | 0.810263 | 1.257212e-50 | -8.615850e-47 |
| Msa0661090 | Msa1227690 | 0.817883 | 2.617079e-52 | -8.615850e-47 |
| Msa0661090 | Msa1234980 | 0.813393 | 2.618463e-51 | -8.615850e-47 |
| Msa0661090 | Msa1240180 | 0.818500 | 1.897494e-52 | -8.615850e-47 |
| Msa0661090 | Msa1240210 | 0.823815 | 1.130272e-53 | -8.615850e-47 |
| Msa0661090 | Msa1249240 | 0.810063 | 1.388884e-50 | -8.615850e-47 |
| Msa0661090 | Msa1254710 | 0.838623 | 2.576276e-57 | -8.615850e-47 |
| Msa0661090 | Msa1255040 | -0.800691 | 1.279702e-48 | -8.615850e-47 |
| Msa0661090 | Msa1269300 | 0.837059 | 6.499624e-57 | -8.615850e-47 |
| Msa0661090 | Msa1272460 | 0.813680 | 2.264063e-51 | -8.615850e-47 |
| Msa0661090 | Msa1286510 | 0.807394 | 5.165537e-50 | -8.615850e-47 |
| Msa0661090 | Msa1304820 | 0.808044 | 3.757590e-50 | -8.615850e-47 |
| Msa0661090 | Msa1305710 | 0.803573 | 3.268521e-49 | -8.615850e-47 |
| Msa0661090 | Msa1307950 | 0.801869 | 7.346162e-49 | -8.615850e-47 |
| Msa0661090 | Msa1310690 | 0.831300 | 1.804660e-55 | -8.615850e-47 |
| Msa0661090 | Msa1317270 | 0.815825 | 7.581543e-52 | -8.615850e-47 |
| Msa0661090 | Msa1320620 | 0.808982 | 2.369302e-50 | -8.615850e-47 |
| Msa0661090 | Msa1331350 | 0.836712 | 7.967023e-57 | -8.615850e-47 |
| Msa0661090 | Msa1339190 | 0.807268 | 5.493053e-50 | -8.615850e-47 |
| Msa0661090 | Msa1340830 | 0.834191 | 3.457237e-56 | -8.615850e-47 |
| Msa0661090 | Msa1342900 | 0.802831 | 4.654662e-49 | -8.615850e-47 |
| Msa0661090 | Msa1344850 | 0.803441 | 3.481295e-49 | -8.615850e-47 |
| Msa0661090 | Msa1364210 | 0.835114 | 2.025787e-56 | -8.615850e-47 |
| Msa0661090 | Msa1365860 | 0.831269 | 1.837122e-55 | -8.615850e-47 |
| Msa0661090 | Msa1372310 | 0.837644 | 4.601780e-57 | -8.615850e-47 |
| Msa0661090 | Msa1382790 | 0.801608 | 8.309331e-49 | -8.615850e-47 |
| Msa0661090 | Msa1386230 | 0.813776 | 2.156583e-51 | -8.615850e-47 |
| Msa0661090 | Msa1389850 | 0.830217 | 3.324890e-55 | -8.615850e-47 |
| Msa0661090 | Msa1389880 | 0.823085 | 1.674713e-53 | -8.615850e-47 |
| Msa0661090 | Msa1397810 | 0.809877 | 1.523022e-50 | -8.615850e-47 |
| Msa0661090 | Msa1416260 | 0.808126 | 3.609762e-50 | -8.615850e-47 |
| Msa0661090 | Msa1423910 | 0.809719 | 1.646522e-50 | -8.615850e-47 |
| Msa0661090 | Msa1437210 | 0.814439 | 1.539597e-51 | -8.615850e-47 |
| Msa0661090 | Msa1442850 | 0.811628 | 6.367530e-51 | -8.615850e-47 |
| Msa0661090 | Msa1461280 | 0.809070 | 2.268798e-50 | -8.615850e-47 |
| Msa0661090 | Msa1463600 | 0.817848 | 2.664724e-52 | -8.615850e-47 |
| Msa0661090 | Msa1465080 | 0.812102 | 5.019229e-51 | -8.615850e-47 |
| Msa0127040 | Msa0661090 | 0.805620 | 1.222816e-49 | -8.615850e-47 |
| Msa0127310 | Msa0661090 | 0.801323 | 9.506436e-49 | -8.615850e-47 |
| Msa0127850 | Msa0661090 | 0.838100 | 3.513721e-57 | -8.615850e-47 |
| Msa0131450 | Msa0661090 | 0.822475 | 2.322182e-53 | -8.615850e-47 |
| Msa0145150 | Msa0661090 | 0.810766 | 9.791798e-51 | -8.615850e-47 |
| Msa0165440 | Msa0661090 | 0.802171 | 6.366857e-49 | -8.615850e-47 |
| Msa0165970 | Msa0661090 | 0.821333 | 4.269675e-53 | -8.615850e-47 |
| Msa0166750 | Msa0661090 | 0.818039 | 2.412851e-52 | -8.615850e-47 |
| Msa0167980 | Msa0661090 | 0.812853 | 3.440230e-51 | -8.615850e-47 |
| Msa0169300 | Msa0661090 | 0.820345 | 7.202902e-53 | -8.615850e-47 |
| Msa0174000 | Msa0661090 | 0.830794 | 2.402715e-55 | -8.615850e-47 |
| Msa0175540 | Msa0661090 | 0.805920 | 1.057328e-49 | -8.615850e-47 |
| Msa0176330 | Msa0661090 | 0.821583 | 3.737012e-53 | -8.615850e-47 |
| Msa0177230 | Msa0661090 | 0.801465 | 8.891755e-49 | -8.615850e-47 |
| Msa0177270 | Msa0661090 | 0.802200 | 6.280075e-49 | -8.615850e-47 |
| Msa0183460 | Msa0661090 | 0.822615 | 2.154746e-53 | -8.615850e-47 |
| Msa0187490 | Msa0661090 | 0.801122 | 1.045026e-48 | -8.615850e-47 |
| Msa0191050 | Msa0661090 | 0.805193 | 1.502650e-49 | -8.615850e-47 |
| Msa0191070 | Msa0661090 | 0.802864 | 4.582736e-49 | -8.615850e-47 |
| Msa0197660 | Msa0661090 | 0.815954 | 7.092558e-52 | -8.615850e-47 |
| Msa0199690 | Msa0661090 | 0.810386 | 1.182657e-50 | -8.615850e-47 |
| Msa0200620 | Msa0661090 | 0.801482 | 8.818295e-49 | -8.615850e-47 |
| Msa0224030 | Msa0661090 | 0.827464 | 1.542184e-54 | -8.615850e-47 |
| Msa0227400 | Msa0661090 | 0.801836 | 7.462088e-49 | -8.615850e-47 |
| Msa0229790 | Msa0661090 | 0.834180 | 3.479498e-56 | -8.615850e-47 |
| Msa0231790 | Msa0661090 | 0.812321 | 4.496846e-51 | -8.615850e-47 |
| Msa0231880 | Msa0661090 | 0.807147 | 5.825016e-50 | -8.615850e-47 |
| Msa0233350 | Msa0661090 | 0.817009 | 4.117975e-52 | -8.615850e-47 |
| Msa0233370 | Msa0661090 | 0.801108 | 1.051865e-48 | -8.615850e-47 |
| Msa0236270 | Msa0661090 | 0.813574 | 2.388746e-51 | -8.615850e-47 |
| Msa0376690 | Msa0661090 | 0.808502 | 3.000463e-50 | -8.615850e-47 |
| Msa0384880 | Msa0661090 | 0.837760 | 4.297196e-57 | -8.615850e-47 |
| Msa0385490 | Msa0661090 | 0.809204 | 2.123938e-50 | -8.615850e-47 |
| Msa0402330 | Msa0661090 | 0.810964 | 8.872834e-51 | -8.615850e-47 |
| Msa0419520 | Msa0661090 | 0.836813 | 7.509289e-57 | -8.615850e-47 |
| Msa0435220 | Msa0661090 | 0.814704 | 1.345204e-51 | -8.615850e-47 |
| Msa0438720 | Msa0661090 | 0.809424 | 1.904841e-50 | -8.615850e-47 |
| Msa0439890 | Msa0661090 | 0.841075 | 5.919523e-58 | -8.615850e-47 |
| Msa0453690 | Msa0661090 | 0.843110 | 1.713411e-58 | -8.615850e-47 |
| Msa0462880 | Msa0661090 | 0.808865 | 2.510056e-50 | -8.615850e-47 |
| Msa0464900 | Msa0661090 | 0.814402 | 1.569203e-51 | -8.615850e-47 |
| Msa0465550 | Msa0661090 | 0.824318 | 8.614525e-54 | -8.615850e-47 |
| Msa0481810 | Msa0661090 | 0.827067 | 1.919450e-54 | -8.615850e-47 |
| Msa0239800 | Msa0661090 | 0.814191 | 1.747049e-51 | -8.615850e-47 |
| Msa0239940 | Msa0661090 | 0.805700 | 1.176088e-49 | -8.615850e-47 |
| Msa0251770 | Msa0661090 | 0.836230 | 1.057139e-56 | -8.615850e-47 |
| Msa0260210 | Msa0661090 | 0.803224 | 3.860503e-49 | -8.615850e-47 |
| Msa0271810 | Msa0661090 | 0.839631 | 1.412104e-57 | -8.615850e-47 |
| Msa0274100 | Msa0661090 | 0.804371 | 2.230312e-49 | -8.615850e-47 |
| Msa0280430 | Msa0661090 | 0.814203 | 1.736397e-51 | -8.615850e-47 |
| Msa0282890 | Msa0661090 | 0.821270 | 4.414900e-53 | -8.615850e-47 |
| Msa0291520 | Msa0661090 | 0.828603 | 8.204088e-55 | -8.615850e-47 |
| Msa0295590 | Msa0661090 | 0.808827 | 2.558273e-50 | -8.615850e-47 |
| Msa0304290 | Msa0661090 | 0.809306 | 2.019622e-50 | -8.615850e-47 |
| Msa0304330 | Msa0661090 | 0.811476 | 6.868696e-51 | -8.615850e-47 |
| Msa0305890 | Msa0661090 | 0.808992 | 2.357565e-50 | -8.615850e-47 |
| Msa0307560 | Msa0661090 | 0.807739 | 4.363127e-50 | -8.615850e-47 |
| Msa0308200 | Msa0661090 | 0.806819 | 6.836566e-50 | -8.615850e-47 |
| Msa0310410 | Msa0661090 | 0.836183 | 1.086226e-56 | -8.615850e-47 |
| Msa0317510 | Msa0661090 | 0.811241 | 7.725559e-51 | -8.615850e-47 |
| Msa0321190 | Msa0661090 | 0.821442 | 4.028947e-53 | -8.615850e-47 |
| Msa0327410 | Msa0661090 | 0.804574 | 2.023441e-49 | -8.615850e-47 |
| Msa0340810 | Msa0661090 | 0.805837 | 1.100533e-49 | -8.615850e-47 |
| Msa0355270 | Msa0661090 | 0.807203 | 5.669707e-50 | -8.615850e-47 |
| Msa0359560 | Msa0661090 | 0.802778 | 4.773214e-49 | -8.615850e-47 |
| Msa0485120 | Msa0661090 | 0.815474 | 9.075760e-52 | -8.615850e-47 |
| Msa0489610 | Msa0661090 | 0.802908 | 4.487643e-49 | -8.615850e-47 |
| Msa0511490 | Msa0661090 | 0.805082 | 1.585065e-49 | -8.615850e-47 |
| Msa0514180 | Msa0661090 | 0.805098 | 1.572636e-49 | -8.615850e-47 |
| Msa0518440 | Msa0661090 | 0.829951 | 3.860642e-55 | -8.615850e-47 |
| Msa0523680 | Msa0661090 | 0.805787 | 1.127547e-49 | -8.615850e-47 |
| Msa0526890 | Msa0661090 | 0.811849 | 5.698970e-51 | -8.615850e-47 |
| Msa0527910 | Msa0661090 | 0.801229 | 9.936345e-49 | -8.615850e-47 |
| Msa0534410 | Msa0661090 | 0.808049 | 3.749140e-50 | -8.615850e-47 |
| Msa0546360 | Msa0661090 | 0.803202 | 3.900616e-49 | -8.615850e-47 |
| Msa0546570 | Msa0661090 | 0.815901 | 7.291282e-52 | -8.615850e-47 |
| Msa0556790 | Msa0661090 | 0.853327 | 2.570801e-61 | -8.615850e-47 |
| Msa0556860 | Msa0661090 | 0.846378 | 2.255994e-59 | -8.615850e-47 |
| Msa0560500 | Msa0661090 | 0.800001 | 1.768627e-48 | -8.615850e-47 |
| Msa0565620 | Msa0661090 | -0.805569 | 1.252947e-49 | -8.615850e-47 |
| Msa0580230 | Msa0661090 | 0.805874 | 1.081252e-49 | -8.615850e-47 |
| Msa0581070 | Msa0661090 | 0.815718 | 8.006992e-52 | -8.615850e-47 |
| Msa0585960 | Msa0661090 | 0.806852 | 6.724783e-50 | -8.615850e-47 |
| Msa0590650 | Msa0661090 | 0.811897 | 5.564240e-51 | -8.615850e-47 |
| Msa0594910 | Msa0661090 | 0.803432 | 3.495856e-49 | -8.615850e-47 |
| Msa0600610 | Msa0661090 | 0.808640 | 2.804891e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661090 | MtrunA17_Chr4g0032221 | 82.292 | 96 | 17 | 0 | 1 | 96 | 1 | 96 | 6.02e-51 | 155 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0661090 | AT5G59140.1 | 60.870 | 92 | 36 | 0 | 5 | 96 | 3 | 94 | 2.87e-34 | 114 |
Find 23 sgRNAs with CRISPR-Local
Find 172 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTTGATTACACAGATTAT+AGG | 0.253948 | 4_3:+72297221 | None:intergenic |
| TTGTGTTCTTTGAATCGTTC+TGG | 0.310300 | 4_3:+72298453 | None:intergenic |
| TGTAATTCTGTTTCGCTAGT+TGG | 0.323700 | 4_3:-72297145 | Msa0661090:three_prime_UTR |
| TGATATGTTAACAATTTGTT+TGG | 0.381399 | 4_3:-72297047 | Msa0661090:three_prime_UTR |
| CGCAACATGCTTACCTCTCC+AGG | 0.383198 | 4_3:-72298329 | Msa0661090:intron |
| ACTGTTGCTTTGTCCGGCTA+TGG | 0.446998 | 4_3:-72297307 | Msa0661090:CDS |
| AATCTAGACACGCATCAATC+AGG | 0.452787 | 4_3:+72297172 | None:intergenic |
| ACAAATCTTCTCAAGAATAG+TGG | 0.454935 | 4_3:+72298128 | None:intergenic |
| AGCTTATTCTTCTCCATAGC+CGG | 0.461892 | 4_3:+72297294 | None:intergenic |
| GCAGGAACTGTTGCTTTGTC+CGG | 0.463903 | 4_3:-72297313 | Msa0661090:CDS |
| AGAATAGTGGAACTAATCTC+AGG | 0.494240 | 4_3:+72298141 | None:intergenic |
| TAGTGTTGATGTGTTTATGT+TGG | 0.494958 | 4_3:-72297571 | Msa0661090:intron |
| AAGAAAAGAAAAGATGAAGA+AGG | 0.522038 | 4_3:-72298432 | Msa0661090:exon |
| AGGTATATTCTAGTTGTCGC+AGG | 0.545307 | 4_3:+72297241 | None:intergenic |
| ATTGGCATCTTGAATTCGCT+AGG | 0.545787 | 4_3:-72298095 | Msa0661090:intron |
| CGTTGACAAAGAAGCTGCCA+TGG | 0.556586 | 4_3:-72298366 | Msa0661090:CDS |
| AACAAAGTATGATCAACTGA+TGG | 0.561245 | 4_3:+72297120 | None:intergenic |
| AGAGGTAAGCATGTTGCGAA+TGG | 0.589014 | 4_3:+72298334 | None:intergenic |
| GTGAAACTGATCAGTTCCGA+TGG | 0.617937 | 4_3:-72298401 | Msa0661090:CDS |
| CGCAGGTATATAGTTTACAA+CGG | 0.619424 | 4_3:+72297258 | None:intergenic |
| GTTTACAACGGCAACAACAA+TGG | 0.619996 | 4_3:+72297270 | None:intergenic |
| GCGAATGGTTTGTGAAACCA+TGG | 0.671918 | 4_3:+72298349 | None:intergenic |
| AACGACGAATTCGAATCCAT+CGG | 0.681941 | 4_3:+72298385 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAACACTAAAATAAAATTTA+GGG | + | chr4_3:72297880-72297899 | None:intergenic | 10.0% |
| !! | ATAACACTAAAATAAAATTT+AGG | + | chr4_3:72297881-72297900 | None:intergenic | 10.0% |
| !! | TAACACTAAAATAAAATTTA+GGG | + | chr4_3:72297880-72297899 | None:intergenic | 10.0% |
| !! | ATAACACTAAAATAAAATTT+AGG | + | chr4_3:72297881-72297900 | None:intergenic | 10.0% |
| !! | CTAATCGAAAAACTATAAAA+AGG | + | chr4_3:72297204-72297223 | None:intergenic | 20.0% |
| !!! | AGATTTGTCAGTATTTTTAT+TGG | - | chr4_3:72297367-72297386 | Msa0661090:intron | 20.0% |
| !!! | TGATATGTTAACAATTTGTT+TGG | - | chr4_3:72298433-72298452 | Msa0661090:exon | 20.0% |
| !! | TGTGAAAAAAATGTTTGATT+TGG | - | chr4_3:72298467-72298486 | Msa0661090:five_prime_UTR | 20.0% |
| !! | CTAATCGAAAAACTATAAAA+AGG | + | chr4_3:72297204-72297223 | None:intergenic | 20.0% |
| !!! | AGATTTGTCAGTATTTTTAT+TGG | - | chr4_3:72297367-72297386 | Msa0661090:intron | 20.0% |
| !!! | TGATATGTTAACAATTTGTT+TGG | - | chr4_3:72298433-72298452 | Msa0661090:exon | 20.0% |
| !! | TGTGAAAAAAATGTTTGATT+TGG | - | chr4_3:72298467-72298486 | Msa0661090:five_prime_UTR | 20.0% |
| ! | AAGAAAAGAAAAGATGAAGA+AGG | - | chr4_3:72297048-72297067 | Msa0661090:three_prime_UTR | 25.0% |
| !!! | TTTTTCGATTAGTGCAATTA+GGG | - | chr4_3:72297212-72297231 | Msa0661090:three_prime_UTR | 25.0% |
| ! | TTAGCGTTAATTCATACATA+AGG | - | chr4_3:72297242-72297261 | Msa0661090:three_prime_UTR | 25.0% |
| !!! | ATGTGATTTGTTCTTTGTTA+GGG | - | chr4_3:72297280-72297299 | Msa0661090:CDS | 25.0% |
| ! | TTTCATGTTAGAATTGCAAT+TGG | - | chr4_3:72297424-72297443 | Msa0661090:intron | 25.0% |
| ! | AGTGTAAACTAAAAATGGTA+AGG | + | chr4_3:72297705-72297724 | None:intergenic | 25.0% |
| !!! | TAGTTGCAAAAGTTTGTTTT+AGG | - | chr4_3:72297811-72297830 | Msa0661090:intron | 25.0% |
| !! | AAAGTTAATTCAGGTTCAAT+AGG | + | chr4_3:72297963-72297982 | None:intergenic | 25.0% |
| ! | TATTGAACCTGAATTAACTT+TGG | - | chr4_3:72297962-72297981 | Msa0661090:intron | 25.0% |
| ! | ATTAACTCCAAAGTTAATTC+AGG | + | chr4_3:72297972-72297991 | None:intergenic | 25.0% |
| !!! | ATTAACTTTGGAGTTAATGA+TGG | - | chr4_3:72297974-72297993 | Msa0661090:intron | 25.0% |
| !!! | AGTAGGTTTTTGTTATTCAT+TGG | - | chr4_3:72298058-72298077 | Msa0661090:intron | 25.0% |
| ! | CATTTGATTACACAGATTAT+AGG | + | chr4_3:72298262-72298281 | None:intergenic | 25.0% |
| ! | AAGAAAAGAAAAGATGAAGA+AGG | - | chr4_3:72297048-72297067 | Msa0661090:three_prime_UTR | 25.0% |
| !!! | TTTTTCGATTAGTGCAATTA+GGG | - | chr4_3:72297212-72297231 | Msa0661090:three_prime_UTR | 25.0% |
| ! | TTAGCGTTAATTCATACATA+AGG | - | chr4_3:72297242-72297261 | Msa0661090:three_prime_UTR | 25.0% |
| !!! | ATGTGATTTGTTCTTTGTTA+GGG | - | chr4_3:72297280-72297299 | Msa0661090:CDS | 25.0% |
| ! | TTTCATGTTAGAATTGCAAT+TGG | - | chr4_3:72297424-72297443 | Msa0661090:intron | 25.0% |
| ! | AGTGTAAACTAAAAATGGTA+AGG | + | chr4_3:72297705-72297724 | None:intergenic | 25.0% |
| !!! | TAGTTGCAAAAGTTTGTTTT+AGG | - | chr4_3:72297811-72297830 | Msa0661090:intron | 25.0% |
| !! | AAAGTTAATTCAGGTTCAAT+AGG | + | chr4_3:72297963-72297982 | None:intergenic | 25.0% |
| ! | TATTGAACCTGAATTAACTT+TGG | - | chr4_3:72297962-72297981 | Msa0661090:intron | 25.0% |
| ! | ATTAACTCCAAAGTTAATTC+AGG | + | chr4_3:72297972-72297991 | None:intergenic | 25.0% |
| !!! | ATTAACTTTGGAGTTAATGA+TGG | - | chr4_3:72297974-72297993 | Msa0661090:intron | 25.0% |
| !!! | AGTAGGTTTTTGTTATTCAT+TGG | - | chr4_3:72298058-72298077 | Msa0661090:intron | 25.0% |
| ! | CATTTGATTACACAGATTAT+AGG | + | chr4_3:72298262-72298281 | None:intergenic | 25.0% |
| GAAAAAAAAAAAACCTGGAG+AGG | + | chr4_3:72297167-72297186 | None:intergenic | 30.0% | |
| TAAAAAGGTAAAGTGATCGA+CGG | + | chr4_3:72297189-72297208 | None:intergenic | 30.0% | |
| !! | GTTTTTCGATTAGTGCAATT+AGG | - | chr4_3:72297211-72297230 | Msa0661090:three_prime_UTR | 30.0% |
| !! | GATGTGATTTGTTCTTTGTT+AGG | - | chr4_3:72297279-72297298 | Msa0661090:CDS | 30.0% |
| ACAAATCTTCTCAAGAATAG+TGG | + | chr4_3:72297355-72297374 | None:intergenic | 30.0% | |
| ! | TCTGAAATCTGAATTGCAAT+TGG | - | chr4_3:72297492-72297511 | Msa0661090:intron | 30.0% |
| AGAATTGCAATGAGAATGTT+TGG | - | chr4_3:72297523-72297542 | Msa0661090:intron | 30.0% | |
| GGTCAAGTGTAAACTAAAAA+TGG | + | chr4_3:72297710-72297729 | None:intergenic | 30.0% | |
| !! | TAGTGTTGATGTGTTTATGT+TGG | - | chr4_3:72297909-72297928 | Msa0661090:intron | 30.0% |
| TGCTCAAGTATGTAGATAAT+TGG | + | chr4_3:72298003-72298022 | None:intergenic | 30.0% | |
| TCATAGTTCTCTTCATTAGT+AGG | - | chr4_3:72298041-72298060 | Msa0661090:intron | 30.0% | |
| AACAAAGTATGATCAACTGA+TGG | + | chr4_3:72298363-72298382 | None:intergenic | 30.0% | |
| GAAAAAAAAAAAACCTGGAG+AGG | + | chr4_3:72297167-72297186 | None:intergenic | 30.0% | |
| TAAAAAGGTAAAGTGATCGA+CGG | + | chr4_3:72297189-72297208 | None:intergenic | 30.0% | |
| !! | GTTTTTCGATTAGTGCAATT+AGG | - | chr4_3:72297211-72297230 | Msa0661090:three_prime_UTR | 30.0% |
| !! | GATGTGATTTGTTCTTTGTT+AGG | - | chr4_3:72297279-72297298 | Msa0661090:CDS | 30.0% |
| ACAAATCTTCTCAAGAATAG+TGG | + | chr4_3:72297355-72297374 | None:intergenic | 30.0% | |
| ! | TCTGAAATCTGAATTGCAAT+TGG | - | chr4_3:72297492-72297511 | Msa0661090:intron | 30.0% |
| AGAATTGCAATGAGAATGTT+TGG | - | chr4_3:72297523-72297542 | Msa0661090:intron | 30.0% | |
| GGTCAAGTGTAAACTAAAAA+TGG | + | chr4_3:72297710-72297729 | None:intergenic | 30.0% | |
| !! | TAGTGTTGATGTGTTTATGT+TGG | - | chr4_3:72297909-72297928 | Msa0661090:intron | 30.0% |
| TGCTCAAGTATGTAGATAAT+TGG | + | chr4_3:72298003-72298022 | None:intergenic | 30.0% | |
| TCATAGTTCTCTTCATTAGT+AGG | - | chr4_3:72298041-72298060 | Msa0661090:intron | 30.0% | |
| AACAAAGTATGATCAACTGA+TGG | + | chr4_3:72298363-72298382 | None:intergenic | 30.0% | |
| TTGTGTTCTTTGAATCGTTC+TGG | + | chr4_3:72297030-72297049 | None:intergenic | 35.0% | |
| CGACGGAAAAAAAAAAAACC+TGG | + | chr4_3:72297172-72297191 | None:intergenic | 35.0% | |
| ! | AGAATAGTGGAACTAATCTC+AGG | + | chr4_3:72297342-72297361 | None:intergenic | 35.0% |
| TTGTAAACAGTGTTCAACTC+CGG | - | chr4_3:72297593-72297612 | Msa0661090:intron | 35.0% | |
| CTAAAAATGGTAAGGTTGCT+TGG | + | chr4_3:72297697-72297716 | None:intergenic | 35.0% | |
| CACAAAAGCAATCAAGAGAA+AGG | + | chr4_3:72297790-72297809 | None:intergenic | 35.0% | |
| !! | CTTTCTCTTGATTGCTTTTG+TGG | - | chr4_3:72297788-72297807 | Msa0661090:intron | 35.0% |
| !!! | GTTTATGTTGGTTTTGCTAG+TGG | - | chr4_3:72297921-72297940 | Msa0661090:intron | 35.0% |
| GAAGAGAACTATGAACCTTT+GGG | + | chr4_3:72298035-72298054 | None:intergenic | 35.0% | |
| TGAAGAGAACTATGAACCTT+TGG | + | chr4_3:72298036-72298055 | None:intergenic | 35.0% | |
| TGCTGCATTACCTATCAAAA+GGG | + | chr4_3:72298150-72298169 | None:intergenic | 35.0% | |
| CGCAGGTATATAGTTTACAA+CGG | + | chr4_3:72298225-72298244 | None:intergenic | 35.0% | |
| TGTAATTCTGTTTCGCTAGT+TGG | - | chr4_3:72298335-72298354 | Msa0661090:CDS | 35.0% | |
| TTGTGTTCTTTGAATCGTTC+TGG | + | chr4_3:72297030-72297049 | None:intergenic | 35.0% | |
| CGACGGAAAAAAAAAAAACC+TGG | + | chr4_3:72297172-72297191 | None:intergenic | 35.0% | |
| ! | AGAATAGTGGAACTAATCTC+AGG | + | chr4_3:72297342-72297361 | None:intergenic | 35.0% |
| TTGTAAACAGTGTTCAACTC+CGG | - | chr4_3:72297593-72297612 | Msa0661090:intron | 35.0% | |
| CTAAAAATGGTAAGGTTGCT+TGG | + | chr4_3:72297697-72297716 | None:intergenic | 35.0% | |
| CACAAAAGCAATCAAGAGAA+AGG | + | chr4_3:72297790-72297809 | None:intergenic | 35.0% | |
| !! | CTTTCTCTTGATTGCTTTTG+TGG | - | chr4_3:72297788-72297807 | Msa0661090:intron | 35.0% |
| !!! | GTTTATGTTGGTTTTGCTAG+TGG | - | chr4_3:72297921-72297940 | Msa0661090:intron | 35.0% |
| GAAGAGAACTATGAACCTTT+GGG | + | chr4_3:72298035-72298054 | None:intergenic | 35.0% | |
| TGAAGAGAACTATGAACCTT+TGG | + | chr4_3:72298036-72298055 | None:intergenic | 35.0% | |
| TGCTGCATTACCTATCAAAA+GGG | + | chr4_3:72298150-72298169 | None:intergenic | 35.0% | |
| CGCAGGTATATAGTTTACAA+CGG | + | chr4_3:72298225-72298244 | None:intergenic | 35.0% | |
| TGTAATTCTGTTTCGCTAGT+TGG | - | chr4_3:72298335-72298354 | Msa0661090:CDS | 35.0% | |
| AACGACGAATTCGAATCCAT+CGG | + | chr4_3:72297098-72297117 | None:intergenic | 40.0% | |
| ! | TGTTAGGGAGTTTTGCTGAA+AGG | - | chr4_3:72297295-72297314 | Msa0661090:CDS | 40.0% |
| ! | GTTAGGGAGTTTTGCTGAAA+GGG | - | chr4_3:72297296-72297315 | Msa0661090:CDS | 40.0% |
| ! | AGTTTTGCTGAAAGGGAACA+CGG | - | chr4_3:72297303-72297322 | Msa0661090:CDS | 40.0% |
| ATTGGCATCTTGAATTCGCT+AGG | - | chr4_3:72297385-72297404 | Msa0661090:intron | 40.0% | |
| AACACTGTTTACAACGCATC+TGG | + | chr4_3:72297587-72297606 | None:intergenic | 40.0% | |
| TGATAACCTTCGATTCCCAA+GGG | + | chr4_3:72297636-72297655 | None:intergenic | 40.0% | |
| !!! | TGTTGGTTTTGCTAGTGGAA+AGG | - | chr4_3:72297926-72297945 | Msa0661090:intron | 40.0% |
| !! | TGAGCATATTGACTTCCCAA+AGG | - | chr4_3:72298017-72298036 | Msa0661090:intron | 40.0% |
| CCTATCAAAAGGGGAAAAGA+GGG | + | chr4_3:72298140-72298159 | None:intergenic | 40.0% | |
| ACCTATCAAAAGGGGAAAAG+AGG | + | chr4_3:72298141-72298160 | None:intergenic | 40.0% | |
| GCTGCATTACCTATCAAAAG+GGG | + | chr4_3:72298149-72298168 | None:intergenic | 40.0% | |
| CTGCTGCATTACCTATCAAA+AGG | + | chr4_3:72298151-72298170 | None:intergenic | 40.0% | |
| ! | CTTTTGATAGGTAATGCAGC+AGG | - | chr4_3:72298149-72298168 | Msa0661090:CDS | 40.0% |
| AGCTTATTCTTCTCCATAGC+CGG | + | chr4_3:72298189-72298208 | None:intergenic | 40.0% | |
| GTTTACAACGGCAACAACAA+TGG | + | chr4_3:72298213-72298232 | None:intergenic | 40.0% | |
| ! | AGGTATATTCTAGTTGTCGC+AGG | + | chr4_3:72298242-72298261 | None:intergenic | 40.0% |
| AATCTAGACACGCATCAATC+AGG | + | chr4_3:72298311-72298330 | None:intergenic | 40.0% | |
| AACGACGAATTCGAATCCAT+CGG | + | chr4_3:72297098-72297117 | None:intergenic | 40.0% | |
| ! | TGTTAGGGAGTTTTGCTGAA+AGG | - | chr4_3:72297295-72297314 | Msa0661090:CDS | 40.0% |
| ! | GTTAGGGAGTTTTGCTGAAA+GGG | - | chr4_3:72297296-72297315 | Msa0661090:CDS | 40.0% |
| ! | AGTTTTGCTGAAAGGGAACA+CGG | - | chr4_3:72297303-72297322 | Msa0661090:CDS | 40.0% |
| ATTGGCATCTTGAATTCGCT+AGG | - | chr4_3:72297385-72297404 | Msa0661090:intron | 40.0% | |
| AACACTGTTTACAACGCATC+TGG | + | chr4_3:72297587-72297606 | None:intergenic | 40.0% | |
| TGATAACCTTCGATTCCCAA+GGG | + | chr4_3:72297636-72297655 | None:intergenic | 40.0% | |
| !!! | TGTTGGTTTTGCTAGTGGAA+AGG | - | chr4_3:72297926-72297945 | Msa0661090:intron | 40.0% |
| !! | TGAGCATATTGACTTCCCAA+AGG | - | chr4_3:72298017-72298036 | Msa0661090:intron | 40.0% |
| CCTATCAAAAGGGGAAAAGA+GGG | + | chr4_3:72298140-72298159 | None:intergenic | 40.0% | |
| ACCTATCAAAAGGGGAAAAG+AGG | + | chr4_3:72298141-72298160 | None:intergenic | 40.0% | |
| GCTGCATTACCTATCAAAAG+GGG | + | chr4_3:72298149-72298168 | None:intergenic | 40.0% | |
| CTGCTGCATTACCTATCAAA+AGG | + | chr4_3:72298151-72298170 | None:intergenic | 40.0% | |
| ! | CTTTTGATAGGTAATGCAGC+AGG | - | chr4_3:72298149-72298168 | Msa0661090:CDS | 40.0% |
| AGCTTATTCTTCTCCATAGC+CGG | + | chr4_3:72298189-72298208 | None:intergenic | 40.0% | |
| GTTTACAACGGCAACAACAA+TGG | + | chr4_3:72298213-72298232 | None:intergenic | 40.0% | |
| ! | AGGTATATTCTAGTTGTCGC+AGG | + | chr4_3:72298242-72298261 | None:intergenic | 40.0% |
| AATCTAGACACGCATCAATC+AGG | + | chr4_3:72298311-72298330 | None:intergenic | 40.0% | |
| GTGAAACTGATCAGTTCCGA+TGG | - | chr4_3:72297079-72297098 | Msa0661090:three_prime_UTR | 45.0% | |
| ! | GCGAATGGTTTGTGAAACCA+TGG | + | chr4_3:72297134-72297153 | None:intergenic | 45.0% |
| AGAGGTAAGCATGTTGCGAA+TGG | + | chr4_3:72297149-72297168 | None:intergenic | 45.0% | |
| TGTTCAACTCCGGATTACCA+GGG | - | chr4_3:72297603-72297622 | Msa0661090:intron | 45.0% | |
| GTGATAACCTTCGATTCCCA+AGG | + | chr4_3:72297637-72297656 | None:intergenic | 45.0% | |
| ! | CCCTCTTTTCCCCTTTTGAT+AGG | - | chr4_3:72298137-72298156 | Msa0661090:CDS | 45.0% |
| GTGAAACTGATCAGTTCCGA+TGG | - | chr4_3:72297079-72297098 | Msa0661090:three_prime_UTR | 45.0% | |
| ! | GCGAATGGTTTGTGAAACCA+TGG | + | chr4_3:72297134-72297153 | None:intergenic | 45.0% |
| AGAGGTAAGCATGTTGCGAA+TGG | + | chr4_3:72297149-72297168 | None:intergenic | 45.0% | |
| TGTTCAACTCCGGATTACCA+GGG | - | chr4_3:72297603-72297622 | Msa0661090:intron | 45.0% | |
| GTGATAACCTTCGATTCCCA+AGG | + | chr4_3:72297637-72297656 | None:intergenic | 45.0% | |
| ! | CCCTCTTTTCCCCTTTTGAT+AGG | - | chr4_3:72298137-72298156 | Msa0661090:CDS | 45.0% |
| CGTTGACAAAGAAGCTGCCA+TGG | - | chr4_3:72297114-72297133 | Msa0661090:three_prime_UTR | 50.0% | |
| GTGTTCAACTCCGGATTACC+AGG | - | chr4_3:72297602-72297621 | Msa0661090:intron | 50.0% | |
| CTTCGATTCCCAAGGGAAAG+TGG | + | chr4_3:72297629-72297648 | None:intergenic | 50.0% | |
| CACTTTCCCTTGGGAATCGA+AGG | - | chr4_3:72297627-72297646 | Msa0661090:intron | 50.0% | |
| ATGTTTCCATGCCACGACCA+CGG | + | chr4_3:72297746-72297765 | None:intergenic | 50.0% | |
| !! | GCAGGAACTGTTGCTTTGTC+CGG | - | chr4_3:72298167-72298186 | Msa0661090:CDS | 50.0% |
| !! | ACTGTTGCTTTGTCCGGCTA+TGG | - | chr4_3:72298173-72298192 | Msa0661090:CDS | 50.0% |
| CGTTGACAAAGAAGCTGCCA+TGG | - | chr4_3:72297114-72297133 | Msa0661090:three_prime_UTR | 50.0% | |
| GTGTTCAACTCCGGATTACC+AGG | - | chr4_3:72297602-72297621 | Msa0661090:intron | 50.0% | |
| CTTCGATTCCCAAGGGAAAG+TGG | + | chr4_3:72297629-72297648 | None:intergenic | 50.0% | |
| CACTTTCCCTTGGGAATCGA+AGG | - | chr4_3:72297627-72297646 | Msa0661090:intron | 50.0% | |
| ATGTTTCCATGCCACGACCA+CGG | + | chr4_3:72297746-72297765 | None:intergenic | 50.0% | |
| !! | GCAGGAACTGTTGCTTTGTC+CGG | - | chr4_3:72298167-72298186 | Msa0661090:CDS | 50.0% |
| !! | ACTGTTGCTTTGTCCGGCTA+TGG | - | chr4_3:72298173-72298192 | Msa0661090:CDS | 50.0% |
| CGCAACATGCTTACCTCTCC+AGG | - | chr4_3:72297151-72297170 | Msa0661090:three_prime_UTR | 55.0% | |
| GGAAAGTGGCCCTGGTAATC+CGG | + | chr4_3:72297615-72297634 | None:intergenic | 55.0% | |
| ! | TTACCAGGGCCACTTTCCCT+TGG | - | chr4_3:72297617-72297636 | Msa0661090:intron | 55.0% |
| ! | TACCAGGGCCACTTTCCCTT+GGG | - | chr4_3:72297618-72297637 | Msa0661090:intron | 55.0% |
| CGCAACATGCTTACCTCTCC+AGG | - | chr4_3:72297151-72297170 | Msa0661090:three_prime_UTR | 55.0% | |
| GGAAAGTGGCCCTGGTAATC+CGG | + | chr4_3:72297615-72297634 | None:intergenic | 55.0% | |
| ! | TTACCAGGGCCACTTTCCCT+TGG | - | chr4_3:72297617-72297636 | Msa0661090:intron | 55.0% |
| ! | TACCAGGGCCACTTTCCCTT+GGG | - | chr4_3:72297618-72297637 | Msa0661090:intron | 55.0% |
| TTCCCAAGGGAAAGTGGCCC+TGG | + | chr4_3:72297623-72297642 | None:intergenic | 60.0% | |
| TTCCCAAGGGAAAGTGGCCC+TGG | + | chr4_3:72297623-72297642 | None:intergenic | 60.0% | |
| GACCACGGACGCAGGCTAGC+GGG | + | chr4_3:72297731-72297750 | None:intergenic | 70.0% | |
| CGACCACGGACGCAGGCTAG+CGG | + | chr4_3:72297732-72297751 | None:intergenic | 70.0% | |
| CTAGCCTGCGTCCGTGGTCG+TGG | - | chr4_3:72297732-72297751 | Msa0661090:intron | 70.0% | |
| CATGCCACGACCACGGACGC+AGG | + | chr4_3:72297739-72297758 | None:intergenic | 70.0% | |
| CTGCGTCCGTGGTCGTGGCA+TGG | - | chr4_3:72297737-72297756 | Msa0661090:intron | 70.0% | |
| GACCACGGACGCAGGCTAGC+GGG | + | chr4_3:72297731-72297750 | None:intergenic | 70.0% | |
| CGACCACGGACGCAGGCTAG+CGG | + | chr4_3:72297732-72297751 | None:intergenic | 70.0% | |
| CTAGCCTGCGTCCGTGGTCG+TGG | - | chr4_3:72297732-72297751 | Msa0661090:intron | 70.0% | |
| CATGCCACGACCACGGACGC+AGG | + | chr4_3:72297739-72297758 | None:intergenic | 70.0% | |
| CTGCGTCCGTGGTCGTGGCA+TGG | - | chr4_3:72297737-72297756 | Msa0661090:intron | 70.0% | |
| ! | GACCCGCTAGCCTGCGTCCG+TGG | - | chr4_3:72297726-72297745 | Msa0661090:intron | 75.0% |
| ! | GACCCGCTAGCCTGCGTCCG+TGG | - | chr4_3:72297726-72297745 | Msa0661090:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_3 | gene | 72297007 | 72298495 | 72297007 | ID=Msa0661090;Name=Msa0661090 |
| chr4_3 | mRNA | 72297007 | 72298495 | 72297007 | ID=Msa0661090-mRNA-1;Parent=Msa0661090;Name=Msa0661090-mRNA-1;_AED=0.22;_eAED=0.24;_QI=54|0.33|0.75|1|0.66|0.75|4|265|102 |
| chr4_3 | exon | 72297007 | 72297343 | 72297007 | ID=Msa0661090-mRNA-1:exon:21700;Parent=Msa0661090-mRNA-1 |
| chr4_3 | exon | 72297572 | 72297590 | 72297572 | ID=Msa0661090-mRNA-1:exon:21699;Parent=Msa0661090-mRNA-1 |
| chr4_3 | exon | 72298096 | 72298201 | 72298096 | ID=Msa0661090-mRNA-1:exon:21698;Parent=Msa0661090-mRNA-1 |
| chr4_3 | exon | 72298330 | 72298495 | 72298330 | ID=Msa0661090-mRNA-1:exon:21697;Parent=Msa0661090-mRNA-1 |
| chr4_3 | five_prime_UTR | 72298442 | 72298495 | 72298442 | ID=Msa0661090-mRNA-1:five_prime_utr;Parent=Msa0661090-mRNA-1 |
| chr4_3 | CDS | 72298330 | 72298441 | 72298330 | ID=Msa0661090-mRNA-1:cds;Parent=Msa0661090-mRNA-1 |
| chr4_3 | CDS | 72298096 | 72298201 | 72298096 | ID=Msa0661090-mRNA-1:cds;Parent=Msa0661090-mRNA-1 |
| chr4_3 | CDS | 72297572 | 72297590 | 72297572 | ID=Msa0661090-mRNA-1:cds;Parent=Msa0661090-mRNA-1 |
| chr4_3 | CDS | 72297272 | 72297343 | 72297272 | ID=Msa0661090-mRNA-1:cds;Parent=Msa0661090-mRNA-1 |
| chr4_3 | three_prime_UTR | 72297007 | 72297271 | 72297007 | ID=Msa0661090-mRNA-1:three_prime_utr;Parent=Msa0661090-mRNA-1 |
| Gene Sequence |
| Protein sequence |
